data_5BZ7 # _entry.id 5BZ7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5BZ7 pdb_00005bz7 10.2210/pdb5bz7/pdb WWPDB D_1000210742 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '5BXW is a related sequence forming an isomorphous structure.' 5BXW unspecified PDB . 5BZ9 unspecified PDB . 5BZY unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5BZ7 _pdbx_database_status.recvd_initial_deposition_date 2015-06-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saoji, M.' 1 'Paukstelis, P.J.' 2 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_id_ASTM ABCRE6 _citation.journal_id_CSD ? _citation.journal_id_ISSN 1399-0047 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 71 _citation.language ? _citation.page_first 2471 _citation.page_last 2478 _citation.title 'Sequence-dependent structural changes in a self-assembling DNA oligonucleotide.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S1399004715019598 _citation.pdbx_database_id_PubMed 26627654 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Saoji, M.' 1 ? primary 'Paukstelis, P.J.' 2 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5BZ7 _cell.details ? _cell.formula_units_Z ? _cell.length_a 26.013 _cell.length_a_esd ? _cell.length_b 26.013 _cell.length_b_esd ? _cell.length_c 122.022 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5BZ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*GP*AP*AP*AP*AP*TP*TP*TP*GP*GP*AP*GP*A)-3') ; 4392.891 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 water nat water 18.015 13 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DA)(DA)(DA)(DA)(DT)(DT)(DT)(DG)(DG)(DA)(DG)(DA)' _entity_poly.pdbx_seq_one_letter_code_can GGAAAATTTGGAGA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DA n 1 4 DA n 1 5 DA n 1 6 DA n 1 7 DT n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DG n 1 14 DA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 14 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5BZ7 _struct_ref.pdbx_db_accession 5BZ7 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5BZ7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5BZ7 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 13 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5BZ7 _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 53.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 296.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;120mM Magnesium Formate 50mM Lithium Chloride 10% MPD ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 77.15 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-29 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979200 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979200 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5BZ7 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.03 _reflns.d_resolution_low 22.53 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3436 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.3 _reflns.pdbx_Rmerge_I_obs 0.111 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.03 _reflns_shell.d_res_low 2.09 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.0 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 97.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.979 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.9 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.00 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][2] -0.00 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.00 _refine.B_iso_max ? _refine.B_iso_mean 57.957 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.950 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5BZ7 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.03 _refine.ls_d_res_low 22.53 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3092 _refine.ls_number_reflns_R_free 344 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.78 _refine.ls_percent_reflns_R_free 10.0 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.23875 _refine.ls_R_factor_R_free 0.29340 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.23352 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5BXW _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.201 _refine.pdbx_overall_ESU_R_Free 0.196 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii 0.70 _refine.pdbx_solvent_shrinkage_radii 0.70 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 7.263 _refine.overall_SU_ML 0.174 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 293 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 308 _refine_hist.d_res_high 2.03 _refine_hist.d_res_low 22.53 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 0.011 331 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 158 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.567 1.150 511 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 3.377 3.000 374 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.163 0.200 42 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.016 0.020 176 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 70 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 7.673 5.896 331 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 7.662 5.892 332 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 11.343 8.885 511 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 11.111 54.806 483 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 11.106 54.773 483 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.03 _refine_ls_shell.d_res_low 2.077 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 22 _refine_ls_shell.number_reflns_R_work 206 _refine_ls_shell.percent_reflns_obs 91.20 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.538 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.502 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5BZ7 _struct.title 'X-ray crystal structure of a continuously hydrogen bonded 14mer DNA lattice.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5BZ7 _struct_keywords.text '3D DNA lattice, 14mer DNA, Self assembly, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 204 5_564 ? ? ? ? ? ? ? 2.136 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? A MG 101 A HOH 213 1_555 ? ? ? ? ? ? ? 2.083 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 11 N7 ? ? A DG 1 A DG 11 4_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 11 O6 ? ? A DG 1 A DG 11 4_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog3 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DG 10 N3 ? ? A DA 3 A DG 10 4_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog4 hydrog ? ? A DA 3 N7 ? ? ? 1_555 A DG 10 N2 ? ? A DA 3 A DG 10 4_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog5 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 9 N3 ? ? A DA 4 A DT 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 9 O4 ? ? A DA 4 A DT 9 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 8 N3 ? ? A DA 5 A DT 8 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 8 O4 ? ? A DA 5 A DT 8 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 6 N1 ? ? ? 1_555 A DT 7 N3 ? ? A DA 6 A DT 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 6 N6 ? ? ? 1_555 A DT 7 O4 ? ? A DA 6 A DT 7 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DA 6 N1 ? ? A DT 7 A DA 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DA 6 N6 ? ? A DT 7 A DA 6 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 8 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 8 A DA 5 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 8 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 8 A DA 5 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 9 N3 ? ? ? 1_555 A DA 4 N1 ? ? A DT 9 A DA 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 9 O4 ? ? ? 1_555 A DA 4 N6 ? ? A DT 9 A DA 4 4_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DA 3 N7 ? ? A DG 10 A DA 3 4_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog18 hydrog ? ? A DG 10 N3 ? ? ? 1_555 A DA 3 N6 ? ? A DG 10 A DA 3 4_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog19 hydrog ? ? A DG 11 N7 ? ? ? 1_555 A DG 1 N1 ? ? A DG 11 A DG 1 4_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog20 hydrog ? ? A DG 11 O6 ? ? ? 1_555 A DG 1 N2 ? ? A DG 11 A DG 1 4_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'binding site for residue MG A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DG A 1 ? DG A 1 . ? 4_565 ? 2 AC1 3 HOH D . ? HOH A 204 . ? 5_564 ? 3 AC1 3 HOH D . ? HOH A 213 . ? 1_555 ? # _atom_sites.entry_id 5BZ7 _atom_sites.fract_transf_matrix[1][1] 0.038442 _atom_sites.fract_transf_matrix[1][2] 0.022195 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.044389 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008195 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? -4.719 -3.414 20.868 1.00 61.33 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -4.923 -2.015 21.241 1.00 60.86 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -4.127 -1.090 20.346 1.00 57.06 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -2.694 -1.318 20.269 1.00 53.93 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -4.588 -0.750 18.937 1.00 52.01 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -4.464 0.654 18.678 1.00 65.03 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -3.587 -1.524 18.099 1.00 48.87 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -2.295 -1.399 18.905 1.00 45.80 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -1.366 -2.521 18.771 1.00 41.63 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? -1.708 -3.853 18.745 1.00 40.46 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? -0.675 -4.645 18.622 1.00 43.74 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 0.418 -3.789 18.600 1.00 38.86 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 1.796 -4.074 18.485 1.00 42.68 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 2.348 -5.179 18.375 1.00 46.01 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 2.560 -2.909 18.475 1.00 39.13 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 2.057 -1.637 18.602 1.00 38.73 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 2.954 -0.649 18.599 1.00 47.33 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 0.772 -1.358 18.722 1.00 41.76 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 0.012 -2.474 18.713 1.00 39.01 ? 1 DG A C4 1 ATOM 20 P P . DG A 1 2 ? -5.103 1.329 17.323 1.00 75.92 ? 2 DG A P 1 ATOM 21 O OP1 . DG A 1 2 ? -5.333 2.760 17.626 1.00 77.41 ? 2 DG A OP1 1 ATOM 22 O OP2 . DG A 1 2 ? -6.189 0.423 16.806 1.00 77.41 ? 2 DG A OP2 1 ATOM 23 O "O5'" . DG A 1 2 ? -3.961 1.280 16.208 1.00 60.97 ? 2 DG A "O5'" 1 ATOM 24 C "C5'" . DG A 1 2 ? -2.666 1.829 16.457 1.00 57.36 ? 2 DG A "C5'" 1 ATOM 25 C "C4'" . DG A 1 2 ? -1.687 1.361 15.406 1.00 62.06 ? 2 DG A "C4'" 1 ATOM 26 O "O4'" . DG A 1 2 ? -1.390 -0.047 15.564 1.00 57.50 ? 2 DG A "O4'" 1 ATOM 27 C "C3'" . DG A 1 2 ? -2.165 1.504 13.963 1.00 59.63 ? 2 DG A "C3'" 1 ATOM 28 O "O3'" . DG A 1 2 ? -1.033 1.706 13.112 1.00 62.85 ? 2 DG A "O3'" 1 ATOM 29 C "C2'" . DG A 1 2 ? -2.737 0.133 13.663 1.00 58.40 ? 2 DG A "C2'" 1 ATOM 30 C "C1'" . DG A 1 2 ? -1.708 -0.735 14.350 1.00 57.51 ? 2 DG A "C1'" 1 ATOM 31 N N9 . DG A 1 2 ? -2.116 -2.092 14.700 1.00 41.68 ? 2 DG A N9 1 ATOM 32 C C8 . DG A 1 2 ? -3.379 -2.587 14.944 1.00 43.01 ? 2 DG A C8 1 ATOM 33 N N7 . DG A 1 2 ? -3.376 -3.848 15.286 1.00 45.56 ? 2 DG A N7 1 ATOM 34 C C5 . DG A 1 2 ? -2.031 -4.200 15.274 1.00 40.50 ? 2 DG A C5 1 ATOM 35 C C6 . DG A 1 2 ? -1.398 -5.427 15.595 1.00 51.55 ? 2 DG A C6 1 ATOM 36 O O6 . DG A 1 2 ? -1.923 -6.505 15.927 1.00 52.28 ? 2 DG A O6 1 ATOM 37 N N1 . DG A 1 2 ? -0.011 -5.335 15.473 1.00 45.09 ? 2 DG A N1 1 ATOM 38 C C2 . DG A 1 2 ? 0.674 -4.199 15.115 1.00 42.52 ? 2 DG A C2 1 ATOM 39 N N2 . DG A 1 2 ? 2.017 -4.300 15.050 1.00 43.26 ? 2 DG A N2 1 ATOM 40 N N3 . DG A 1 2 ? 0.091 -3.051 14.819 1.00 37.26 ? 2 DG A N3 1 ATOM 41 C C4 . DG A 1 2 ? -1.246 -3.122 14.920 1.00 38.12 ? 2 DG A C4 1 ATOM 42 P P . DA A 1 3 ? -0.825 3.115 12.403 1.00 70.02 ? 3 DA A P 1 ATOM 43 O OP1 . DA A 1 3 ? -1.168 4.145 13.419 1.00 77.41 ? 3 DA A OP1 1 ATOM 44 O OP2 . DA A 1 3 ? -1.582 3.088 11.114 1.00 75.78 ? 3 DA A OP2 1 ATOM 45 O "O5'" . DA A 1 3 ? 0.740 3.111 12.100 1.00 63.76 ? 3 DA A "O5'" 1 ATOM 46 C "C5'" . DA A 1 3 ? 1.655 3.494 13.137 1.00 57.48 ? 3 DA A "C5'" 1 ATOM 47 C "C4'" . DA A 1 3 ? 3.060 3.107 12.757 1.00 61.05 ? 3 DA A "C4'" 1 ATOM 48 O "O4'" . DA A 1 3 ? 3.158 1.677 12.854 1.00 56.92 ? 3 DA A "O4'" 1 ATOM 49 C "C3'" . DA A 1 3 ? 3.483 3.437 11.329 1.00 63.97 ? 3 DA A "C3'" 1 ATOM 50 O "O3'" . DA A 1 3 ? 4.898 3.641 11.282 1.00 69.40 ? 3 DA A "O3'" 1 ATOM 51 C "C2'" . DA A 1 3 ? 3.152 2.164 10.572 1.00 60.13 ? 3 DA A "C2'" 1 ATOM 52 C "C1'" . DA A 1 3 ? 3.491 1.111 11.600 1.00 54.00 ? 3 DA A "C1'" 1 ATOM 53 N N9 . DA A 1 3 ? 2.741 -0.138 11.475 1.00 44.41 ? 3 DA A N9 1 ATOM 54 C C8 . DA A 1 3 ? 1.408 -0.358 11.724 1.00 40.33 ? 3 DA A C8 1 ATOM 55 N N7 . DA A 1 3 ? 1.044 -1.611 11.569 1.00 48.40 ? 3 DA A N7 1 ATOM 56 C C5 . DA A 1 3 ? 2.227 -2.265 11.237 1.00 38.46 ? 3 DA A C5 1 ATOM 57 C C6 . DA A 1 3 ? 2.515 -3.607 10.918 1.00 43.16 ? 3 DA A C6 1 ATOM 58 N N6 . DA A 1 3 ? 1.604 -4.582 10.902 1.00 47.87 ? 3 DA A N6 1 ATOM 59 N N1 . DA A 1 3 ? 3.793 -3.919 10.616 1.00 44.10 ? 3 DA A N1 1 ATOM 60 C C2 . DA A 1 3 ? 4.712 -2.945 10.621 1.00 48.48 ? 3 DA A C2 1 ATOM 61 N N3 . DA A 1 3 ? 4.563 -1.649 10.898 1.00 48.02 ? 3 DA A N3 1 ATOM 62 C C4 . DA A 1 3 ? 3.284 -1.372 11.206 1.00 40.25 ? 3 DA A C4 1 ATOM 63 P P . DA A 1 4 ? 5.548 4.328 9.993 1.00 80.87 ? 4 DA A P 1 ATOM 64 O OP1 . DA A 1 4 ? 6.883 4.855 10.389 1.00 81.77 ? 4 DA A OP1 1 ATOM 65 O OP2 . DA A 1 4 ? 4.514 5.257 9.427 1.00 68.78 ? 4 DA A OP2 1 ATOM 66 O "O5'" . DA A 1 4 ? 5.753 3.087 9.001 1.00 73.11 ? 4 DA A "O5'" 1 ATOM 67 C "C5'" . DA A 1 4 ? 6.876 2.165 9.070 1.00 62.19 ? 4 DA A "C5'" 1 ATOM 68 C "C4'" . DA A 1 4 ? 6.726 1.059 8.041 1.00 68.06 ? 4 DA A "C4'" 1 ATOM 69 O "O4'" . DA A 1 4 ? 5.473 0.356 8.245 1.00 63.45 ? 4 DA A "O4'" 1 ATOM 70 C "C3'" . DA A 1 4 ? 6.704 1.480 6.563 1.00 69.40 ? 4 DA A "C3'" 1 ATOM 71 O "O3'" . DA A 1 4 ? 7.182 0.434 5.704 1.00 77.77 ? 4 DA A "O3'" 1 ATOM 72 C "C2'" . DA A 1 4 ? 5.223 1.549 6.246 1.00 62.71 ? 4 DA A "C2'" 1 ATOM 73 C "C1'" . DA A 1 4 ? 4.742 0.339 7.017 1.00 53.42 ? 4 DA A "C1'" 1 ATOM 74 N N9 . DA A 1 4 ? 3.315 0.312 7.338 1.00 48.66 ? 4 DA A N9 1 ATOM 75 C C8 . DA A 1 4 ? 2.424 1.346 7.494 1.00 46.06 ? 4 DA A C8 1 ATOM 76 N N7 . DA A 1 4 ? 1.202 0.953 7.771 1.00 45.68 ? 4 DA A N7 1 ATOM 77 C C5 . DA A 1 4 ? 1.300 -0.432 7.820 1.00 42.42 ? 4 DA A C5 1 ATOM 78 C C6 . DA A 1 4 ? 0.358 -1.436 8.085 1.00 43.68 ? 4 DA A C6 1 ATOM 79 N N6 . DA A 1 4 ? -0.918 -1.191 8.387 1.00 52.26 ? 4 DA A N6 1 ATOM 80 N N1 . DA A 1 4 ? 0.777 -2.719 8.038 1.00 45.54 ? 4 DA A N1 1 ATOM 81 C C2 . DA A 1 4 ? 2.064 -2.966 7.758 1.00 49.77 ? 4 DA A C2 1 ATOM 82 N N3 . DA A 1 4 ? 3.047 -2.107 7.500 1.00 50.01 ? 4 DA A N3 1 ATOM 83 C C4 . DA A 1 4 ? 2.590 -0.842 7.539 1.00 44.71 ? 4 DA A C4 1 ATOM 84 P P . DA A 1 5 ? 8.336 0.728 4.637 1.00 78.15 ? 5 DA A P 1 ATOM 85 O OP1 . DA A 1 5 ? 9.435 1.430 5.345 1.00 102.49 ? 5 DA A OP1 1 ATOM 86 O OP2 . DA A 1 5 ? 7.720 1.334 3.427 1.00 69.51 ? 5 DA A OP2 1 ATOM 87 O "O5'" . DA A 1 5 ? 8.882 -0.718 4.241 1.00 83.33 ? 5 DA A "O5'" 1 ATOM 88 C "C5'" . DA A 1 5 ? 8.714 -1.886 5.062 1.00 78.84 ? 5 DA A "C5'" 1 ATOM 89 C "C4'" . DA A 1 5 ? 7.857 -2.921 4.361 1.00 80.88 ? 5 DA A "C4'" 1 ATOM 90 O "O4'" . DA A 1 5 ? 6.448 -2.716 4.632 1.00 74.51 ? 5 DA A "O4'" 1 ATOM 91 C "C3'" . DA A 1 5 ? 7.979 -3.015 2.835 1.00 76.70 ? 5 DA A "C3'" 1 ATOM 92 O "O3'" . DA A 1 5 ? 8.294 -4.386 2.573 1.00 89.20 ? 5 DA A "O3'" 1 ATOM 93 C "C2'" . DA A 1 5 ? 6.629 -2.526 2.325 1.00 59.51 ? 5 DA A "C2'" 1 ATOM 94 C "C1'" . DA A 1 5 ? 5.704 -2.936 3.448 1.00 62.52 ? 5 DA A "C1'" 1 ATOM 95 N N9 . DA A 1 5 ? 4.444 -2.209 3.595 1.00 50.29 ? 5 DA A N9 1 ATOM 96 C C8 . DA A 1 5 ? 4.196 -0.858 3.529 1.00 53.35 ? 5 DA A C8 1 ATOM 97 N N7 . DA A 1 5 ? 2.957 -0.533 3.817 1.00 44.00 ? 5 DA A N7 1 ATOM 98 C C5 . DA A 1 5 ? 2.363 -1.748 4.142 1.00 42.73 ? 5 DA A C5 1 ATOM 99 C C6 . DA A 1 5 ? 1.052 -2.089 4.525 1.00 41.47 ? 5 DA A C6 1 ATOM 100 N N6 . DA A 1 5 ? 0.067 -1.197 4.694 1.00 48.25 ? 5 DA A N6 1 ATOM 101 N N1 . DA A 1 5 ? 0.787 -3.390 4.760 1.00 49.90 ? 5 DA A N1 1 ATOM 102 C C2 . DA A 1 5 ? 1.780 -4.286 4.611 1.00 55.76 ? 5 DA A C2 1 ATOM 103 N N3 . DA A 1 5 ? 3.049 -4.088 4.259 1.00 50.14 ? 5 DA A N3 1 ATOM 104 C C4 . DA A 1 5 ? 3.276 -2.784 4.030 1.00 47.87 ? 5 DA A C4 1 ATOM 105 P P . DA A 1 6 ? 8.230 -4.980 1.100 1.00 98.12 ? 6 DA A P 1 ATOM 106 O OP1 . DA A 1 6 ? 9.366 -5.922 0.954 1.00 84.57 ? 6 DA A OP1 1 ATOM 107 O OP2 . DA A 1 6 ? 8.047 -3.859 0.138 1.00 94.38 ? 6 DA A OP2 1 ATOM 108 O "O5'" . DA A 1 6 ? 6.882 -5.827 1.122 1.00 92.84 ? 6 DA A "O5'" 1 ATOM 109 C "C5'" . DA A 1 6 ? 6.788 -7.043 1.881 1.00 82.95 ? 6 DA A "C5'" 1 ATOM 110 C "C4'" . DA A 1 6 ? 5.499 -7.749 1.536 1.00 77.83 ? 6 DA A "C4'" 1 ATOM 111 O "O4'" . DA A 1 6 ? 4.380 -6.874 1.806 1.00 77.25 ? 6 DA A "O4'" 1 ATOM 112 C "C3'" . DA A 1 6 ? 5.377 -8.128 0.066 1.00 77.74 ? 6 DA A "C3'" 1 ATOM 113 O "O3'" . DA A 1 6 ? 4.760 -9.417 -0.014 1.00 90.36 ? 6 DA A "O3'" 1 ATOM 114 C "C2'" . DA A 1 6 ? 4.582 -6.975 -0.521 1.00 72.08 ? 6 DA A "C2'" 1 ATOM 115 C "C1'" . DA A 1 6 ? 3.645 -6.630 0.618 1.00 67.25 ? 6 DA A "C1'" 1 ATOM 116 N N9 . DA A 1 6 ? 3.145 -5.251 0.665 1.00 53.37 ? 6 DA A N9 1 ATOM 117 C C8 . DA A 1 6 ? 3.796 -4.075 0.385 1.00 51.38 ? 6 DA A C8 1 ATOM 118 N N7 . DA A 1 6 ? 3.046 -3.007 0.540 1.00 51.00 ? 6 DA A N7 1 ATOM 119 C C5 . DA A 1 6 ? 1.824 -3.515 0.954 1.00 42.67 ? 6 DA A C5 1 ATOM 120 C C6 . DA A 1 6 ? 0.601 -2.905 1.251 1.00 40.74 ? 6 DA A C6 1 ATOM 121 N N6 . DA A 1 6 ? 0.400 -1.592 1.217 1.00 52.40 ? 6 DA A N6 1 ATOM 122 N N1 . DA A 1 6 ? -0.432 -3.701 1.586 1.00 45.61 ? 6 DA A N1 1 ATOM 123 C C2 . DA A 1 6 ? -0.241 -5.021 1.609 1.00 41.51 ? 6 DA A C2 1 ATOM 124 N N3 . DA A 1 6 ? 0.857 -5.715 1.344 1.00 46.32 ? 6 DA A N3 1 ATOM 125 C C4 . DA A 1 6 ? 1.862 -4.896 1.007 1.00 47.26 ? 6 DA A C4 1 ATOM 126 P P . DT A 1 7 ? 4.378 -10.058 -1.438 1.00 107.50 ? 7 DT A P 1 ATOM 127 O OP1 . DT A 1 7 ? 4.421 -11.535 -1.311 1.00 85.69 ? 7 DT A OP1 1 ATOM 128 O OP2 . DT A 1 7 ? 5.167 -9.370 -2.501 1.00 108.17 ? 7 DT A OP2 1 ATOM 129 O "O5'" . DT A 1 7 ? 2.845 -9.677 -1.553 1.00 76.94 ? 7 DT A "O5'" 1 ATOM 130 C "C5'" . DT A 1 7 ? 2.020 -9.875 -0.410 1.00 76.78 ? 7 DT A "C5'" 1 ATOM 131 C "C4'" . DT A 1 7 ? 0.592 -9.625 -0.809 1.00 83.19 ? 7 DT A "C4'" 1 ATOM 132 O "O4'" . DT A 1 7 ? 0.305 -8.210 -0.722 1.00 76.44 ? 7 DT A "O4'" 1 ATOM 133 C "C3'" . DT A 1 7 ? 0.289 -10.030 -2.253 1.00 92.00 ? 7 DT A "C3'" 1 ATOM 134 O "O3'" . DT A 1 7 ? -0.987 -10.683 -2.220 1.00 100.06 ? 7 DT A "O3'" 1 ATOM 135 C "C2'" . DT A 1 7 ? 0.329 -8.707 -3.001 1.00 81.55 ? 7 DT A "C2'" 1 ATOM 136 C "C1'" . DT A 1 7 ? -0.268 -7.786 -1.951 1.00 76.16 ? 7 DT A "C1'" 1 ATOM 137 N N1 . DT A 1 7 ? 0.006 -6.351 -2.096 1.00 55.49 ? 7 DT A N1 1 ATOM 138 C C2 . DT A 1 7 ? -1.006 -5.462 -1.816 1.00 50.25 ? 7 DT A C2 1 ATOM 139 O O2 . DT A 1 7 ? -2.127 -5.807 -1.486 1.00 57.99 ? 7 DT A O2 1 ATOM 140 N N3 . DT A 1 7 ? -0.655 -4.141 -1.931 1.00 53.83 ? 7 DT A N3 1 ATOM 141 C C4 . DT A 1 7 ? 0.587 -3.634 -2.256 1.00 50.74 ? 7 DT A C4 1 ATOM 142 O O4 . DT A 1 7 ? 0.755 -2.417 -2.307 1.00 54.53 ? 7 DT A O4 1 ATOM 143 C C5 . DT A 1 7 ? 1.611 -4.624 -2.513 1.00 54.35 ? 7 DT A C5 1 ATOM 144 C C7 . DT A 1 7 ? 2.982 -4.169 -2.902 1.00 55.22 ? 7 DT A C7 1 ATOM 145 C C6 . DT A 1 7 ? 1.275 -5.916 -2.415 1.00 58.96 ? 7 DT A C6 1 ATOM 146 P P . DT A 1 8 ? -1.602 -11.373 -3.530 1.00 87.95 ? 8 DT A P 1 ATOM 147 O OP1 . DT A 1 8 ? -2.142 -12.693 -3.098 1.00 112.91 ? 8 DT A OP1 1 ATOM 148 O OP2 . DT A 1 8 ? -0.568 -11.321 -4.618 1.00 74.02 ? 8 DT A OP2 1 ATOM 149 O "O5'" . DT A 1 8 ? -2.828 -10.402 -3.874 1.00 80.92 ? 8 DT A "O5'" 1 ATOM 150 C "C5'" . DT A 1 8 ? -3.746 -9.965 -2.841 1.00 68.85 ? 8 DT A "C5'" 1 ATOM 151 C "C4'" . DT A 1 8 ? -4.793 -9.027 -3.399 1.00 72.70 ? 8 DT A "C4'" 1 ATOM 152 O "O4'" . DT A 1 8 ? -4.299 -7.668 -3.365 1.00 72.58 ? 8 DT A "O4'" 1 ATOM 153 C "C3'" . DT A 1 8 ? -5.219 -9.296 -4.848 1.00 75.64 ? 8 DT A "C3'" 1 ATOM 154 O "O3'" . DT A 1 8 ? -6.655 -9.341 -4.970 1.00 76.77 ? 8 DT A "O3'" 1 ATOM 155 C "C2'" . DT A 1 8 ? -4.590 -8.155 -5.631 1.00 65.92 ? 8 DT A "C2'" 1 ATOM 156 C "C1'" . DT A 1 8 ? -4.529 -7.031 -4.609 1.00 63.80 ? 8 DT A "C1'" 1 ATOM 157 N N1 . DT A 1 8 ? -3.427 -6.071 -4.835 1.00 51.81 ? 8 DT A N1 1 ATOM 158 C C2 . DT A 1 8 ? -3.669 -4.717 -4.766 1.00 46.27 ? 8 DT A C2 1 ATOM 159 O O2 . DT A 1 8 ? -4.760 -4.244 -4.491 1.00 54.78 ? 8 DT A O2 1 ATOM 160 N N3 . DT A 1 8 ? -2.571 -3.930 -5.012 1.00 44.65 ? 8 DT A N3 1 ATOM 161 C C4 . DT A 1 8 ? -1.297 -4.355 -5.329 1.00 44.40 ? 8 DT A C4 1 ATOM 162 O O4 . DT A 1 8 ? -0.411 -3.538 -5.524 1.00 49.34 ? 8 DT A O4 1 ATOM 163 C C5 . DT A 1 8 ? -1.131 -5.784 -5.433 1.00 48.07 ? 8 DT A C5 1 ATOM 164 C C7 . DT A 1 8 ? 0.206 -6.333 -5.816 1.00 53.76 ? 8 DT A C7 1 ATOM 165 C C6 . DT A 1 8 ? -2.189 -6.558 -5.185 1.00 51.06 ? 8 DT A C6 1 ATOM 166 P P . DT A 1 9 ? -7.356 -9.786 -6.365 1.00 79.19 ? 9 DT A P 1 ATOM 167 O OP1 . DT A 1 9 ? -8.703 -10.338 -6.059 1.00 78.99 ? 9 DT A OP1 1 ATOM 168 O OP2 . DT A 1 9 ? -6.357 -10.550 -7.198 1.00 67.77 ? 9 DT A OP2 1 ATOM 169 O "O5'" . DT A 1 9 ? -7.680 -8.388 -7.064 1.00 84.46 ? 9 DT A "O5'" 1 ATOM 170 C "C5'" . DT A 1 9 ? -8.536 -7.415 -6.410 1.00 84.27 ? 9 DT A "C5'" 1 ATOM 171 C "C4'" . DT A 1 9 ? -8.522 -6.100 -7.159 1.00 70.27 ? 9 DT A "C4'" 1 ATOM 172 O "O4'" . DT A 1 9 ? -7.204 -5.495 -7.068 1.00 65.02 ? 9 DT A "O4'" 1 ATOM 173 C "C3'" . DT A 1 9 ? -8.834 -6.206 -8.661 1.00 54.46 ? 9 DT A "C3'" 1 ATOM 174 O "O3'" . DT A 1 9 ? -9.754 -5.141 -8.955 1.00 57.43 ? 9 DT A "O3'" 1 ATOM 175 C "C2'" . DT A 1 9 ? -7.460 -6.071 -9.296 1.00 51.86 ? 9 DT A "C2'" 1 ATOM 176 C "C1'" . DT A 1 9 ? -6.865 -5.037 -8.364 1.00 57.16 ? 9 DT A "C1'" 1 ATOM 177 N N1 . DT A 1 9 ? -5.414 -4.826 -8.414 1.00 50.31 ? 9 DT A N1 1 ATOM 178 C C2 . DT A 1 9 ? -4.944 -3.538 -8.261 1.00 44.23 ? 9 DT A C2 1 ATOM 179 O O2 . DT A 1 9 ? -5.671 -2.577 -8.069 1.00 49.20 ? 9 DT A O2 1 ATOM 180 N N3 . DT A 1 9 ? -3.584 -3.416 -8.333 1.00 42.49 ? 9 DT A N3 1 ATOM 181 C C4 . DT A 1 9 ? -2.666 -4.427 -8.517 1.00 41.11 ? 9 DT A C4 1 ATOM 182 O O4 . DT A 1 9 ? -1.466 -4.164 -8.546 1.00 47.58 ? 9 DT A O4 1 ATOM 183 C C5 . DT A 1 9 ? -3.225 -5.747 -8.666 1.00 42.69 ? 9 DT A C5 1 ATOM 184 C C7 . DT A 1 9 ? -2.302 -6.904 -8.875 1.00 51.58 ? 9 DT A C7 1 ATOM 185 C C6 . DT A 1 9 ? -4.556 -5.876 -8.632 1.00 48.87 ? 9 DT A C6 1 ATOM 186 P P . DG A 1 10 ? -10.636 -5.131 -10.314 1.00 63.99 ? 10 DG A P 1 ATOM 187 O OP1 . DG A 1 10 ? -11.985 -4.627 -9.965 1.00 55.39 ? 10 DG A OP1 1 ATOM 188 O OP2 . DG A 1 10 ? -10.426 -6.417 -11.030 1.00 60.47 ? 10 DG A OP2 1 ATOM 189 O "O5'" . DG A 1 10 ? -9.920 -4.039 -11.229 1.00 69.77 ? 10 DG A "O5'" 1 ATOM 190 C "C5'" . DG A 1 10 ? -9.410 -2.816 -10.657 1.00 60.52 ? 10 DG A "C5'" 1 ATOM 191 C "C4'" . DG A 1 10 ? -8.247 -2.310 -11.473 1.00 44.80 ? 10 DG A "C4'" 1 ATOM 192 O "O4'" . DG A 1 10 ? -7.086 -3.139 -11.262 1.00 48.31 ? 10 DG A "O4'" 1 ATOM 193 C "C3'" . DG A 1 10 ? -8.479 -2.298 -12.986 1.00 51.66 ? 10 DG A "C3'" 1 ATOM 194 O "O3'" . DG A 1 10 ? -7.980 -1.036 -13.436 1.00 58.77 ? 10 DG A "O3'" 1 ATOM 195 C "C2'" . DG A 1 10 ? -7.609 -3.440 -13.471 1.00 41.47 ? 10 DG A "C2'" 1 ATOM 196 C "C1'" . DG A 1 10 ? -6.465 -3.315 -12.503 1.00 43.87 ? 10 DG A "C1'" 1 ATOM 197 N N9 . DG A 1 10 ? -5.596 -4.482 -12.443 1.00 44.10 ? 10 DG A N9 1 ATOM 198 C C8 . DG A 1 10 ? -5.960 -5.767 -12.760 1.00 43.62 ? 10 DG A C8 1 ATOM 199 N N7 . DG A 1 10 ? -4.956 -6.599 -12.758 1.00 41.24 ? 10 DG A N7 1 ATOM 200 C C5 . DG A 1 10 ? -3.871 -5.833 -12.367 1.00 42.56 ? 10 DG A C5 1 ATOM 201 C C6 . DG A 1 10 ? -2.514 -6.198 -12.189 1.00 48.34 ? 10 DG A C6 1 ATOM 202 O O6 . DG A 1 10 ? -1.997 -7.313 -12.304 1.00 57.03 ? 10 DG A O6 1 ATOM 203 N N1 . DG A 1 10 ? -1.729 -5.101 -11.846 1.00 51.58 ? 10 DG A N1 1 ATOM 204 C C2 . DG A 1 10 ? -2.192 -3.817 -11.688 1.00 45.77 ? 10 DG A C2 1 ATOM 205 N N2 . DG A 1 10 ? -1.274 -2.902 -11.349 1.00 48.94 ? 10 DG A N2 1 ATOM 206 N N3 . DG A 1 10 ? -3.463 -3.463 -11.843 1.00 48.46 ? 10 DG A N3 1 ATOM 207 C C4 . DG A 1 10 ? -4.240 -4.516 -12.189 1.00 41.57 ? 10 DG A C4 1 ATOM 208 P P . DG A 1 11 ? -8.591 -0.252 -14.699 1.00 49.89 ? 11 DG A P 1 ATOM 209 O OP1 . DG A 1 11 ? -10.043 -0.088 -14.512 1.00 47.62 ? 11 DG A OP1 1 ATOM 210 O OP2 . DG A 1 11 ? -8.020 -0.880 -15.920 1.00 50.96 ? 11 DG A OP2 1 ATOM 211 O "O5'" . DG A 1 11 ? -7.947 1.188 -14.484 1.00 57.11 ? 11 DG A "O5'" 1 ATOM 212 C "C5'" . DG A 1 11 ? -8.093 1.863 -13.221 1.00 56.02 ? 11 DG A "C5'" 1 ATOM 213 C "C4'" . DG A 1 11 ? -8.554 3.275 -13.482 1.00 63.20 ? 11 DG A "C4'" 1 ATOM 214 O "O4'" . DG A 1 11 ? -7.516 3.963 -14.208 1.00 53.98 ? 11 DG A "O4'" 1 ATOM 215 C "C3'" . DG A 1 11 ? -9.800 3.389 -14.358 1.00 66.09 ? 11 DG A "C3'" 1 ATOM 216 O "O3'" . DG A 1 11 ? -10.558 4.533 -13.960 1.00 68.81 ? 11 DG A "O3'" 1 ATOM 217 C "C2'" . DG A 1 11 ? -9.239 3.546 -15.765 1.00 54.19 ? 11 DG A "C2'" 1 ATOM 218 C "C1'" . DG A 1 11 ? -7.987 4.345 -15.502 1.00 48.75 ? 11 DG A "C1'" 1 ATOM 219 N N9 . DG A 1 11 ? -6.887 4.146 -16.425 1.00 43.53 ? 11 DG A N9 1 ATOM 220 C C8 . DG A 1 11 ? -6.393 2.963 -16.917 1.00 44.68 ? 11 DG A C8 1 ATOM 221 N N7 . DG A 1 11 ? -5.295 3.116 -17.608 1.00 48.13 ? 11 DG A N7 1 ATOM 222 C C5 . DG A 1 11 ? -5.070 4.485 -17.592 1.00 46.10 ? 11 DG A C5 1 ATOM 223 C C6 . DG A 1 11 ? -4.047 5.262 -18.204 1.00 45.98 ? 11 DG A C6 1 ATOM 224 O O6 . DG A 1 11 ? -3.110 4.886 -18.916 1.00 49.04 ? 11 DG A O6 1 ATOM 225 N N1 . DG A 1 11 ? -4.180 6.611 -17.899 1.00 51.70 ? 11 DG A N1 1 ATOM 226 C C2 . DG A 1 11 ? -5.169 7.147 -17.113 1.00 53.97 ? 11 DG A C2 1 ATOM 227 N N2 . DG A 1 11 ? -5.127 8.471 -16.935 1.00 61.81 ? 11 DG A N2 1 ATOM 228 N N3 . DG A 1 11 ? -6.116 6.435 -16.526 1.00 48.39 ? 11 DG A N3 1 ATOM 229 C C4 . DG A 1 11 ? -6.017 5.125 -16.823 1.00 47.61 ? 11 DG A C4 1 ATOM 230 P P . DA A 1 12 ? -11.896 4.881 -14.739 1.00 79.31 ? 12 DA A P 1 ATOM 231 O OP1 . DA A 1 12 ? -12.945 5.186 -13.718 1.00 73.17 ? 12 DA A OP1 1 ATOM 232 O OP2 . DA A 1 12 ? -12.135 3.817 -15.755 1.00 85.58 ? 12 DA A OP2 1 ATOM 233 O "O5'" . DA A 1 12 ? -11.492 6.162 -15.599 1.00 88.75 ? 12 DA A "O5'" 1 ATOM 234 C "C5'" . DA A 1 12 ? -10.864 7.326 -15.014 1.00 83.97 ? 12 DA A "C5'" 1 ATOM 235 C "C4'" . DA A 1 12 ? -10.653 8.380 -16.078 1.00 77.13 ? 12 DA A "C4'" 1 ATOM 236 O "O4'" . DA A 1 12 ? -9.586 7.955 -16.957 1.00 65.22 ? 12 DA A "O4'" 1 ATOM 237 C "C3'" . DA A 1 12 ? -11.845 8.658 -17.000 1.00 78.96 ? 12 DA A "C3'" 1 ATOM 238 O "O3'" . DA A 1 12 ? -11.700 10.026 -17.419 1.00 90.83 ? 12 DA A "O3'" 1 ATOM 239 C "C2'" . DA A 1 12 ? -11.606 7.711 -18.166 1.00 68.15 ? 12 DA A "C2'" 1 ATOM 240 C "C1'" . DA A 1 12 ? -10.083 7.784 -18.286 1.00 61.39 ? 12 DA A "C1'" 1 ATOM 241 N N9 . DA A 1 12 ? -9.403 6.622 -18.852 1.00 59.46 ? 12 DA A N9 1 ATOM 242 C C8 . DA A 1 12 ? -9.764 5.296 -18.781 1.00 55.42 ? 12 DA A C8 1 ATOM 243 N N7 . DA A 1 12 ? -8.899 4.483 -19.338 1.00 55.59 ? 12 DA A N7 1 ATOM 244 C C5 . DA A 1 12 ? -7.901 5.330 -19.806 1.00 45.83 ? 12 DA A C5 1 ATOM 245 C C6 . DA A 1 12 ? -6.718 5.087 -20.510 1.00 47.74 ? 12 DA A C6 1 ATOM 246 N N6 . DA A 1 12 ? -6.307 3.863 -20.848 1.00 50.44 ? 12 DA A N6 1 ATOM 247 N N1 . DA A 1 12 ? -5.924 6.147 -20.797 1.00 43.26 ? 12 DA A N1 1 ATOM 248 C C2 . DA A 1 12 ? -6.343 7.371 -20.455 1.00 48.27 ? 12 DA A C2 1 ATOM 249 N N3 . DA A 1 12 ? -7.453 7.728 -19.809 1.00 47.18 ? 12 DA A N3 1 ATOM 250 C C4 . DA A 1 12 ? -8.202 6.649 -19.519 1.00 51.18 ? 12 DA A C4 1 ATOM 251 P P . DG A 1 13 ? -12.919 10.860 -18.080 1.00 80.66 ? 13 DG A P 1 ATOM 252 O OP1 . DG A 1 13 ? -13.093 12.117 -17.286 1.00 89.55 ? 13 DG A OP1 1 ATOM 253 O OP2 . DG A 1 13 ? -14.066 9.923 -18.388 1.00 60.81 ? 13 DG A OP2 1 ATOM 254 O "O5'" . DG A 1 13 ? -12.363 11.304 -19.506 1.00 73.35 ? 13 DG A "O5'" 1 ATOM 255 C "C5'" . DG A 1 13 ? -10.955 11.485 -19.805 1.00 73.60 ? 13 DG A "C5'" 1 ATOM 256 C "C4'" . DG A 1 13 ? -10.724 11.193 -21.272 1.00 72.81 ? 13 DG A "C4'" 1 ATOM 257 O "O4'" . DG A 1 13 ? -10.221 9.839 -21.399 1.00 59.41 ? 13 DG A "O4'" 1 ATOM 258 C "C3'" . DG A 1 13 ? -12.013 11.264 -22.107 1.00 70.56 ? 13 DG A "C3'" 1 ATOM 259 O "O3'" . DG A 1 13 ? -12.364 12.581 -22.644 1.00 85.53 ? 13 DG A "O3'" 1 ATOM 260 C "C2'" . DG A 1 13 ? -11.975 10.024 -22.992 1.00 60.11 ? 13 DG A "C2'" 1 ATOM 261 C "C1'" . DG A 1 13 ? -10.727 9.247 -22.572 1.00 57.23 ? 13 DG A "C1'" 1 ATOM 262 N N9 . DG A 1 13 ? -10.918 7.826 -22.311 1.00 55.88 ? 13 DG A N9 1 ATOM 263 C C8 . DG A 1 13 ? -11.994 7.192 -21.735 1.00 62.67 ? 13 DG A C8 1 ATOM 264 N N7 . DG A 1 13 ? -11.859 5.892 -21.688 1.00 49.83 ? 13 DG A N7 1 ATOM 265 C C5 . DG A 1 13 ? -10.619 5.656 -22.270 1.00 58.34 ? 13 DG A C5 1 ATOM 266 C C6 . DG A 1 13 ? -9.920 4.433 -22.500 1.00 60.33 ? 13 DG A C6 1 ATOM 267 O O6 . DG A 1 13 ? -10.274 3.271 -22.233 1.00 60.37 ? 13 DG A O6 1 ATOM 268 N N1 . DG A 1 13 ? -8.709 4.655 -23.147 1.00 42.48 ? 13 DG A N1 1 ATOM 269 C C2 . DG A 1 13 ? -8.208 5.884 -23.486 1.00 47.83 ? 13 DG A C2 1 ATOM 270 N N2 . DG A 1 13 ? -6.991 5.885 -24.037 1.00 44.26 ? 13 DG A N2 1 ATOM 271 N N3 . DG A 1 13 ? -8.837 7.030 -23.267 1.00 40.62 ? 13 DG A N3 1 ATOM 272 C C4 . DG A 1 13 ? -10.026 6.841 -22.657 1.00 47.21 ? 13 DG A C4 1 ATOM 273 P P . DA A 1 14 ? -11.436 13.414 -23.686 1.00 80.05 ? 14 DA A P 1 ATOM 274 O OP1 . DA A 1 14 ? -10.452 12.493 -24.318 1.00 108.35 ? 14 DA A OP1 1 ATOM 275 O OP2 . DA A 1 14 ? -10.930 14.608 -23.004 1.00 58.35 ? 14 DA A OP2 1 ATOM 276 O "O5'" . DA A 1 14 ? -12.468 13.747 -24.848 1.00 82.57 ? 14 DA A "O5'" 1 ATOM 277 C "C5'" . DA A 1 14 ? -13.402 12.753 -25.309 1.00 72.54 ? 14 DA A "C5'" 1 ATOM 278 C "C4'" . DA A 1 14 ? -14.603 13.437 -25.912 1.00 82.01 ? 14 DA A "C4'" 1 ATOM 279 O "O4'" . DA A 1 14 ? -15.020 14.506 -25.031 1.00 79.71 ? 14 DA A "O4'" 1 ATOM 280 C "C3'" . DA A 1 14 ? -14.331 14.130 -27.242 1.00 89.67 ? 14 DA A "C3'" 1 ATOM 281 O "O3'" . DA A 1 14 ? -14.412 13.239 -28.360 1.00 112.07 ? 14 DA A "O3'" 1 ATOM 282 C "C2'" . DA A 1 14 ? -15.426 15.181 -27.281 1.00 82.68 ? 14 DA A "C2'" 1 ATOM 283 C "C1'" . DA A 1 14 ? -15.632 15.535 -25.803 1.00 67.68 ? 14 DA A "C1'" 1 ATOM 284 N N9 . DA A 1 14 ? -15.039 16.822 -25.433 1.00 50.61 ? 14 DA A N9 1 ATOM 285 C C8 . DA A 1 14 ? -13.827 17.140 -24.864 1.00 48.74 ? 14 DA A C8 1 ATOM 286 N N7 . DA A 1 14 ? -13.611 18.434 -24.768 1.00 45.98 ? 14 DA A N7 1 ATOM 287 C C5 . DA A 1 14 ? -14.754 19.005 -25.323 1.00 44.69 ? 14 DA A C5 1 ATOM 288 C C6 . DA A 1 14 ? -15.157 20.347 -25.509 1.00 43.51 ? 14 DA A C6 1 ATOM 289 N N6 . DA A 1 14 ? -14.425 21.400 -25.135 1.00 46.73 ? 14 DA A N6 1 ATOM 290 N N1 . DA A 1 14 ? -16.359 20.568 -26.086 1.00 42.22 ? 14 DA A N1 1 ATOM 291 C C2 . DA A 1 14 ? -17.102 19.510 -26.453 1.00 43.50 ? 14 DA A C2 1 ATOM 292 N N3 . DA A 1 14 ? -16.823 18.208 -26.351 1.00 41.94 ? 14 DA A N3 1 ATOM 293 C C4 . DA A 1 14 ? -15.648 18.023 -25.719 1.00 40.11 ? 14 DA A C4 1 HETATM 294 MG MG . MG B 2 . ? -15.220 14.943 -18.424 1.00 75.18 ? 101 MG A MG 1 HETATM 295 MG MG . MG C 2 . ? -11.824 4.673 -25.712 1.00 69.01 ? 102 MG A MG 1 HETATM 296 O O . HOH D 3 . ? -6.801 -2.675 -16.847 1.00 44.87 ? 201 HOH A O 1 HETATM 297 O O . HOH D 3 . ? -11.844 19.938 -23.943 1.00 55.11 ? 202 HOH A O 1 HETATM 298 O O . HOH D 3 . ? 4.638 -5.996 9.570 1.00 59.15 ? 203 HOH A O 1 HETATM 299 O O . HOH D 3 . ? -4.039 6.484 -22.391 1.00 56.04 ? 204 HOH A O 1 HETATM 300 O O . HOH D 3 . ? -9.166 0.987 -22.146 1.00 53.74 ? 205 HOH A O 1 HETATM 301 O O . HOH D 3 . ? -4.038 -6.993 -0.000 0.50 64.71 ? 206 HOH A O 1 HETATM 302 O O . HOH D 3 . ? -2.389 8.445 -19.229 1.00 61.11 ? 207 HOH A O 1 HETATM 303 O O . HOH D 3 . ? -0.013 1.423 18.576 1.00 58.64 ? 208 HOH A O 1 HETATM 304 O O . HOH D 3 . ? -7.365 -3.913 -3.038 1.00 72.92 ? 209 HOH A O 1 HETATM 305 O O . HOH D 3 . ? 9.317 -8.724 -0.122 1.00 74.40 ? 210 HOH A O 1 HETATM 306 O O . HOH D 3 . ? 7.828 -1.979 8.807 1.00 66.02 ? 211 HOH A O 1 HETATM 307 O O . HOH D 3 . ? -11.005 1.797 -18.476 1.00 67.96 ? 212 HOH A O 1 HETATM 308 O O . HOH D 3 . ? -16.407 13.812 -17.139 1.00 64.61 ? 213 HOH A O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DA 4 4 4 DA DA A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DA 12 12 12 DA DA A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DA 14 14 14 DA DA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 101 1 MG MG A . C 2 MG 1 102 2 MG MG A . D 3 HOH 1 201 9 HOH HOH A . D 3 HOH 2 202 8 HOH HOH A . D 3 HOH 3 203 16 HOH HOH A . D 3 HOH 4 204 6 HOH HOH A . D 3 HOH 5 205 5 HOH HOH A . D 3 HOH 6 206 14 HOH HOH A . D 3 HOH 7 207 12 HOH HOH A . D 3 HOH 8 208 20 HOH HOH A . D 3 HOH 9 209 13 HOH HOH A . D 3 HOH 10 210 18 HOH HOH A . D 3 HOH 11 211 19 HOH HOH A . D 3 HOH 12 212 21 HOH HOH A . D 3 HOH 13 213 7 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1520 ? 1 MORE -15 ? 1 'SSA (A^2)' 5950 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_555 y,x,-z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 206 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id O _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id D _pdbx_struct_conn_angle.ptnr1_label_comp_id HOH _pdbx_struct_conn_angle.ptnr1_label_seq_id . _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr1_auth_seq_id 204 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 5_564 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id D _pdbx_struct_conn_angle.ptnr3_label_comp_id HOH _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id HOH _pdbx_struct_conn_angle.ptnr3_auth_seq_id 213 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 75.7 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-11-11 2 'Structure model' 1 1 2015-12-16 3 'Structure model' 1 2 2016-07-20 4 'Structure model' 1 3 2017-11-22 5 'Structure model' 1 4 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_oper_list 2 4 'Structure model' software 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' pdbx_struct_conn_angle 8 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 2 4 'Structure model' '_software.classification' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 9 5 'Structure model' '_struct_conn.pdbx_dist_value' 10 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 5 'Structure model' '_struct_conn.ptnr2_symmetry' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C5'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C4'" _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.01 _pdbx_validate_rmsd_angle.angle_target_value 109.80 _pdbx_validate_rmsd_angle.angle_deviation 7.21 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DG OP3 O N N 37 DG P P N N 38 DG OP1 O N N 39 DG OP2 O N N 40 DG "O5'" O N N 41 DG "C5'" C N N 42 DG "C4'" C N R 43 DG "O4'" O N N 44 DG "C3'" C N S 45 DG "O3'" O N N 46 DG "C2'" C N N 47 DG "C1'" C N R 48 DG N9 N Y N 49 DG C8 C Y N 50 DG N7 N Y N 51 DG C5 C Y N 52 DG C6 C N N 53 DG O6 O N N 54 DG N1 N N N 55 DG C2 C N N 56 DG N2 N N N 57 DG N3 N N N 58 DG C4 C Y N 59 DG HOP3 H N N 60 DG HOP2 H N N 61 DG "H5'" H N N 62 DG "H5''" H N N 63 DG "H4'" H N N 64 DG "H3'" H N N 65 DG "HO3'" H N N 66 DG "H2'" H N N 67 DG "H2''" H N N 68 DG "H1'" H N N 69 DG H8 H N N 70 DG H1 H N N 71 DG H21 H N N 72 DG H22 H N N 73 DT OP3 O N N 74 DT P P N N 75 DT OP1 O N N 76 DT OP2 O N N 77 DT "O5'" O N N 78 DT "C5'" C N N 79 DT "C4'" C N R 80 DT "O4'" O N N 81 DT "C3'" C N S 82 DT "O3'" O N N 83 DT "C2'" C N N 84 DT "C1'" C N R 85 DT N1 N N N 86 DT C2 C N N 87 DT O2 O N N 88 DT N3 N N N 89 DT C4 C N N 90 DT O4 O N N 91 DT C5 C N N 92 DT C7 C N N 93 DT C6 C N N 94 DT HOP3 H N N 95 DT HOP2 H N N 96 DT "H5'" H N N 97 DT "H5''" H N N 98 DT "H4'" H N N 99 DT "H3'" H N N 100 DT "HO3'" H N N 101 DT "H2'" H N N 102 DT "H2''" H N N 103 DT "H1'" H N N 104 DT H3 H N N 105 DT H71 H N N 106 DT H72 H N N 107 DT H73 H N N 108 DT H6 H N N 109 HOH O O N N 110 HOH H1 H N N 111 HOH H2 H N N 112 MG MG MG N N 113 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DG OP3 P sing N N 39 DG OP3 HOP3 sing N N 40 DG P OP1 doub N N 41 DG P OP2 sing N N 42 DG P "O5'" sing N N 43 DG OP2 HOP2 sing N N 44 DG "O5'" "C5'" sing N N 45 DG "C5'" "C4'" sing N N 46 DG "C5'" "H5'" sing N N 47 DG "C5'" "H5''" sing N N 48 DG "C4'" "O4'" sing N N 49 DG "C4'" "C3'" sing N N 50 DG "C4'" "H4'" sing N N 51 DG "O4'" "C1'" sing N N 52 DG "C3'" "O3'" sing N N 53 DG "C3'" "C2'" sing N N 54 DG "C3'" "H3'" sing N N 55 DG "O3'" "HO3'" sing N N 56 DG "C2'" "C1'" sing N N 57 DG "C2'" "H2'" sing N N 58 DG "C2'" "H2''" sing N N 59 DG "C1'" N9 sing N N 60 DG "C1'" "H1'" sing N N 61 DG N9 C8 sing Y N 62 DG N9 C4 sing Y N 63 DG C8 N7 doub Y N 64 DG C8 H8 sing N N 65 DG N7 C5 sing Y N 66 DG C5 C6 sing N N 67 DG C5 C4 doub Y N 68 DG C6 O6 doub N N 69 DG C6 N1 sing N N 70 DG N1 C2 sing N N 71 DG N1 H1 sing N N 72 DG C2 N2 sing N N 73 DG C2 N3 doub N N 74 DG N2 H21 sing N N 75 DG N2 H22 sing N N 76 DG N3 C4 sing N N 77 DT OP3 P sing N N 78 DT OP3 HOP3 sing N N 79 DT P OP1 doub N N 80 DT P OP2 sing N N 81 DT P "O5'" sing N N 82 DT OP2 HOP2 sing N N 83 DT "O5'" "C5'" sing N N 84 DT "C5'" "C4'" sing N N 85 DT "C5'" "H5'" sing N N 86 DT "C5'" "H5''" sing N N 87 DT "C4'" "O4'" sing N N 88 DT "C4'" "C3'" sing N N 89 DT "C4'" "H4'" sing N N 90 DT "O4'" "C1'" sing N N 91 DT "C3'" "O3'" sing N N 92 DT "C3'" "C2'" sing N N 93 DT "C3'" "H3'" sing N N 94 DT "O3'" "HO3'" sing N N 95 DT "C2'" "C1'" sing N N 96 DT "C2'" "H2'" sing N N 97 DT "C2'" "H2''" sing N N 98 DT "C1'" N1 sing N N 99 DT "C1'" "H1'" sing N N 100 DT N1 C2 sing N N 101 DT N1 C6 sing N N 102 DT C2 O2 doub N N 103 DT C2 N3 sing N N 104 DT N3 C4 sing N N 105 DT N3 H3 sing N N 106 DT C4 O4 doub N N 107 DT C4 C5 sing N N 108 DT C5 C7 sing N N 109 DT C5 C6 doub N N 110 DT C7 H71 sing N N 111 DT C7 H72 sing N N 112 DT C7 H73 sing N N 113 DT C6 H6 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5BZ7 'double helix' 5BZ7 'b-form double helix' 5BZ7 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DG 11 4_555 5.732 -0.466 0.038 30.305 -1.317 -107.957 1 A_DG1:DG11_A A 1 ? A 11 ? 7 4 1 A DG 1 1_555 A DG 11 1_555 5.732 -0.466 0.038 30.305 -1.317 -107.957 2 A_DG1:DG11_A A 1 ? A 11 ? 7 4 1 A DA 3 1_555 A DG 10 4_555 -6.716 -4.403 0.271 -24.748 -5.553 2.595 3 A_DA3:DG10_A A 3 ? A 10 ? 11 9 1 A DA 4 1_555 A DT 9 4_555 -0.149 -0.133 -0.117 3.235 2.832 -1.127 4 A_DA4:DT9_A A 4 ? A 9 ? 20 1 1 A DA 5 1_555 A DT 8 4_555 -0.258 0.046 0.020 14.349 -13.369 2.038 5 A_DA5:DT8_A A 5 ? A 8 ? 20 1 1 A DA 6 1_555 A DT 7 4_555 -0.079 0.079 -0.086 5.158 -17.685 3.029 6 A_DA6:DT7_A A 6 ? A 7 ? 20 1 1 A DT 7 1_555 A DA 6 4_555 0.079 0.079 -0.086 -5.158 -17.684 3.029 7 A_DT7:DA6_A A 7 ? A 6 ? 20 1 1 A DT 8 1_555 A DA 5 4_555 0.258 0.046 0.020 -14.349 -13.369 2.038 8 A_DT8:DA5_A A 8 ? A 5 ? 20 1 1 A DT 9 1_555 A DA 4 4_555 0.149 -0.133 -0.117 -3.235 2.832 -1.127 9 A_DT9:DA4_A A 9 ? A 4 ? 20 1 1 A DG 10 1_555 A DA 3 4_555 6.716 -4.403 0.271 24.748 -5.553 2.595 10 A_DG10:DA3_A A 10 ? A 3 ? 11 9 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 3 1_555 A DG 10 4_555 A DA 4 1_555 A DT 9 4_555 -0.845 1.677 2.868 -0.263 3.070 59.642 1.548 0.837 2.947 3.084 0.264 59.714 1 AA_DA3DA4:DT9DG10_AA A 3 ? A 10 ? A 4 ? A 9 ? 1 A DA 4 1_555 A DT 9 4_555 A DA 5 1_555 A DT 8 4_555 -0.613 0.354 3.145 -1.830 3.844 30.098 -0.075 0.813 3.195 7.355 3.501 30.390 2 AA_DA4DA5:DT8DT9_AA A 4 ? A 9 ? A 5 ? A 8 ? 1 A DA 5 1_555 A DT 8 4_555 A DA 6 1_555 A DT 7 4_555 -0.141 -0.110 3.428 -0.575 2.492 39.823 -0.462 0.137 3.417 3.654 0.843 39.902 3 AA_DA5DA6:DT7DT8_AA A 5 ? A 8 ? A 6 ? A 7 ? 1 A DA 6 1_555 A DT 7 4_555 A DT 7 1_555 A DA 6 4_555 0.000 -0.707 3.468 0.000 3.297 33.862 -1.760 0.000 3.386 5.645 0.000 34.017 4 AA_DA6DT7:DA6DT7_AA A 6 ? A 7 ? A 7 ? A 6 ? 1 A DT 7 1_555 A DA 6 4_555 A DT 8 1_555 A DA 5 4_555 0.141 -0.110 3.428 0.575 2.492 39.823 -0.462 -0.137 3.417 3.654 -0.843 39.902 5 AA_DT7DT8:DA5DA6_AA A 7 ? A 6 ? A 8 ? A 5 ? 1 A DT 8 1_555 A DA 5 4_555 A DT 9 1_555 A DA 4 4_555 0.613 0.354 3.145 1.830 3.844 30.098 -0.075 -0.813 3.195 7.355 -3.501 30.390 6 AA_DT8DT9:DA4DA5_AA A 8 ? A 5 ? A 9 ? A 4 ? 1 A DT 9 1_555 A DA 4 4_555 A DG 10 1_555 A DA 3 4_555 0.845 1.677 2.868 0.263 3.070 59.642 1.548 -0.837 2.947 3.084 -0.264 59.714 7 AA_DT9DG10:DA3DA4_AA A 9 ? A 4 ? A 10 ? A 3 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5BXW _pdbx_initial_refinement_model.details ? #