0.017350
0.000000
0.000000
0.000000
0.017350
0.000000
0.000000
0.000000
0.008716
0.00000
0.00000
0.00000
Gibson, R.P.
Shore, E.
Kershaw, N.
Awais, M.
Javed, A.
Latawiec, D.
Pandalaneni, S.
Wen, L.
Berry, N.
O'Neill, P.
Sutton, R.
Lian, L.Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
57.638
57.638
114.735
C17 H19 N3 O3
313.351
ethyl N-{[3-(pyridin-4-yl)benzyl]carbamoyl}glycinate
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H18 O5
194.226
TETRAETHYLENE GLYCOL
non-polymer
C6 H14 O4
150.173
TRIETHYLENE GLYCOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
N
C
N
3
N
O
N
4
N
N
N
5
N
C
N
6
N
O
Y
7
N
N
N
8
N
C
N
9
N
O
N
10
N
C
N
11
N
C
N
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
C
Y
17
N
C
Y
18
N
C
Y
19
N
C
Y
20
N
C
Y
21
N
C
Y
22
N
C
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
N
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
N
C
Y
194
N
C
Y
195
N
N
Y
196
N
C
Y
197
N
C
Y
198
N
N
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
S
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
K
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
N
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
S
N
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
N
403
N
O
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
R
C
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
N
N
430
S
C
N
431
N
C
N
432
N
O
N
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
N
Y
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
N
443
N
O
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
N
N
457
S
C
N
458
N
C
N
459
N
O
N
460
N
C
Y
461
N
C
Y
462
N
C
Y
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
N
467
N
O
N
468
N
O
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
N
N
481
S
C
N
482
N
C
N
483
N
O
N
484
N
C
N
485
N
C
N
486
N
C
N
487
N
O
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
Y
8
N
doub
Y
9
N
sing
N
10
N
sing
N
11
N
sing
Y
12
N
sing
Y
13
N
doub
N
14
N
doub
N
15
N
sing
Y
16
N
doub
N
17
N
sing
Y
18
N
sing
Y
19
N
doub
Y
20
N
sing
Y
21
N
sing
Y
22
N
doub
Y
23
N
doub
Y
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
doub
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
Y
192
N
sing
Y
193
N
doub
Y
194
N
doub
N
195
N
sing
Y
196
N
sing
N
197
N
sing
Y
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
Y
355
N
sing
N
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
doub
N
360
N
sing
Y
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
doub
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
Y
422
N
doub
Y
423
N
sing
Y
424
N
sing
N
425
N
sing
Y
426
N
doub
Y
427
N
sing
Y
428
N
sing
N
429
N
sing
Y
430
N
sing
Y
431
N
doub
N
432
N
sing
Y
433
N
doub
N
434
N
sing
Y
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
Y
450
N
doub
Y
451
N
sing
Y
452
N
sing
N
453
N
sing
Y
454
N
doub
N
455
N
sing
Y
456
N
doub
N
457
N
sing
Y
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
doub
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
To Be Published
0353
Human Cyclophilin D Complexed with Inhibitor.
10.2210/pdb5cbu/pdb
pdb_00005cbu
100
1
PIXEL
2013-04-20
PSI PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.8856
1.0
PROXIMA 1
SOLEIL
0.8856
SYNCHROTRON
SOLEIL BEAMLINE PROXIMA 1
17783.322
Peptidyl-prolyl cis-trans isomerase F, mitochondrial
5.2.1.8
UNP residues 44-207
K133I
1
man
polymer
39.098
POTASSIUM ION
1
syn
non-polymer
194.226
TETRAETHYLENE GLYCOL
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
150.173
TRIETHYLENE GLYCOL
1
syn
non-polymer
313.351
ethyl N-{[3-(pyridin-4-yl)benzyl]carbamoyl}glycinate
2
syn
non-polymer
18.015
water
132
nat
water
PPIase F,Cyclophilin D,CypD,Cyclophilin F,Mitochondrial cyclophilin,CyP-M,Rotamase F, Cyclophilin D
no
no
MGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG
SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITD
CGQLS
MGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG
SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITD
CGQLS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
165
PPIF, CYP3
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
Biological sequence
pet28b
2.68
54.09
VAPOR DIFFUSION, SITTING DROP
9
4M potassium formate, 0.1M BIS-TRIS propane pH 9, 2% w/v PEG2000mme
294
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Refinement description
1
0
2016-07-20
1
1
2024-01-10
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
RCSB
Y
PDBE
2015-07-01
REL
REL
K
POTASSIUM ION
PG4
TETRAETHYLENE GLYCOL
EDO
1,2-ETHANEDIOL
PGE
TRIETHYLENE GLYCOL
4ZM
ethyl N-{[3-(pyridin-4-yl)benzyl]carbamoyl}glycinate
HOH
water
2BIT
PDB
experimental model
K
1
2
K
K
201
A
PG4
1
3
PG4
PG4
202
A
EDO
2
4
EDO
EDO
203
A
PGE
1
5
PGE
PGE
204
A
E19
1
6
4ZM
4ZM
205
A
E19
2
6
4ZM
4ZM
206
A
HOH
109
7
HOH
HOH
301
A
HOH
110
7
HOH
HOH
302
A
HOH
130
7
HOH
HOH
303
A
HOH
14
7
HOH
HOH
304
A
HOH
82
7
HOH
HOH
305
A
HOH
1
7
HOH
HOH
306
A
HOH
113
7
HOH
HOH
307
A
HOH
20
7
HOH
HOH
308
A
HOH
19
7
HOH
HOH
309
A
HOH
112
7
HOH
HOH
310
A
HOH
41
7
HOH
HOH
311
A
HOH
40
7
HOH
HOH
312
A
HOH
118
7
HOH
HOH
313
A
HOH
61
7
HOH
HOH
314
A
HOH
111
7
HOH
HOH
315
A
HOH
107
7
HOH
HOH
316
A
HOH
58
7
HOH
HOH
317
A
HOH
129
7
HOH
HOH
318
A
HOH
52
7
HOH
HOH
319
A
HOH
34
7
HOH
HOH
320
A
HOH
27
7
HOH
HOH
321
A
HOH
87
7
HOH
HOH
322
A
HOH
8
7
HOH
HOH
323
A
HOH
21
7
HOH
HOH
324
A
HOH
75
7
HOH
HOH
325
A
HOH
68
7
HOH
HOH
326
A
HOH
92
7
HOH
HOH
327
A
HOH
26
7
HOH
HOH
328
A
HOH
72
7
HOH
HOH
329
A
HOH
13
7
HOH
HOH
330
A
HOH
7
7
HOH
HOH
331
A
HOH
67
7
HOH
HOH
332
A
HOH
122
7
HOH
HOH
333
A
HOH
94
7
HOH
HOH
334
A
HOH
35
7
HOH
HOH
335
A
HOH
5
7
HOH
HOH
336
A
HOH
12
7
HOH
HOH
337
A
HOH
69
7
HOH
HOH
338
A
HOH
80
7
HOH
HOH
339
A
HOH
15
7
HOH
HOH
340
A
HOH
51
7
HOH
HOH
341
A
HOH
18
7
HOH
HOH
342
A
HOH
93
7
HOH
HOH
343
A
HOH
39
7
HOH
HOH
344
A
HOH
131
7
HOH
HOH
345
A
HOH
127
7
HOH
HOH
346
A
HOH
88
7
HOH
HOH
347
A
HOH
91
7
HOH
HOH
348
A
HOH
104
7
HOH
HOH
349
A
HOH
119
7
HOH
HOH
350
A
HOH
74
7
HOH
HOH
351
A
HOH
116
7
HOH
HOH
352
A
HOH
50
7
HOH
HOH
353
A
HOH
3
7
HOH
HOH
354
A
HOH
85
7
HOH
HOH
355
A
HOH
62
7
HOH
HOH
356
A
HOH
108
7
HOH
HOH
357
A
HOH
53
7
HOH
HOH
358
A
HOH
60
7
HOH
HOH
359
A
HOH
132
7
HOH
HOH
360
A
HOH
6
7
HOH
HOH
361
A
HOH
32
7
HOH
HOH
362
A
HOH
10
7
HOH
HOH
363
A
HOH
134
7
HOH
HOH
364
A
HOH
33
7
HOH
HOH
365
A
HOH
25
7
HOH
HOH
366
A
HOH
47
7
HOH
HOH
367
A
HOH
97
7
HOH
HOH
368
A
HOH
59
7
HOH
HOH
369
A
HOH
42
7
HOH
HOH
370
A
HOH
4
7
HOH
HOH
371
A
HOH
81
7
HOH
HOH
372
A
HOH
133
7
HOH
HOH
373
A
HOH
43
7
HOH
HOH
374
A
HOH
9
7
HOH
HOH
375
A
HOH
37
7
HOH
HOH
376
A
HOH
79
7
HOH
HOH
377
A
HOH
24
7
HOH
HOH
378
A
HOH
78
7
HOH
HOH
379
A
HOH
120
7
HOH
HOH
380
A
HOH
48
7
HOH
HOH
381
A
HOH
121
7
HOH
HOH
382
A
HOH
56
7
HOH
HOH
383
A
HOH
46
7
HOH
HOH
384
A
HOH
96
7
HOH
HOH
385
A
HOH
84
7
HOH
HOH
386
A
HOH
123
7
HOH
HOH
387
A
HOH
11
7
HOH
HOH
388
A
HOH
44
7
HOH
HOH
389
A
HOH
57
7
HOH
HOH
390
A
HOH
63
7
HOH
HOH
391
A
HOH
76
7
HOH
HOH
392
A
HOH
66
7
HOH
HOH
393
A
HOH
36
7
HOH
HOH
394
A
HOH
54
7
HOH
HOH
395
A
HOH
17
7
HOH
HOH
396
A
HOH
30
7
HOH
HOH
397
A
HOH
2
7
HOH
HOH
398
A
HOH
106
7
HOH
HOH
399
A
HOH
38
7
HOH
HOH
400
A
HOH
70
7
HOH
HOH
401
A
HOH
65
7
HOH
HOH
402
A
HOH
90
7
HOH
HOH
403
A
HOH
28
7
HOH
HOH
404
A
HOH
31
7
HOH
HOH
405
A
HOH
86
7
HOH
HOH
406
A
HOH
99
7
HOH
HOH
407
A
HOH
49
7
HOH
HOH
408
A
HOH
16
7
HOH
HOH
409
A
HOH
83
7
HOH
HOH
410
A
HOH
115
7
HOH
HOH
411
A
HOH
22
7
HOH
HOH
412
A
HOH
45
7
HOH
HOH
413
A
HOH
29
7
HOH
HOH
414
A
HOH
114
7
HOH
HOH
415
A
HOH
89
7
HOH
HOH
416
A
HOH
124
7
HOH
HOH
417
A
HOH
55
7
HOH
HOH
418
A
HOH
100
7
HOH
HOH
419
A
HOH
126
7
HOH
HOH
420
A
HOH
128
7
HOH
HOH
421
A
HOH
73
7
HOH
HOH
422
A
HOH
101
7
HOH
HOH
423
A
HOH
105
7
HOH
HOH
424
A
HOH
77
7
HOH
HOH
425
A
HOH
98
7
HOH
HOH
426
A
HOH
102
7
HOH
HOH
427
A
HOH
95
7
HOH
HOH
428
A
HOH
125
7
HOH
HOH
429
A
HOH
23
7
HOH
HOH
430
A
HOH
64
7
HOH
HOH
431
A
HOH
103
7
HOH
HOH
432
A
n
1
1
A
GLY
2
n
2
GLY
2
A
ASN
3
n
3
ASN
3
A
PRO
4
n
4
PRO
4
A
LEU
5
n
5
LEU
5
A
VAL
6
n
6
VAL
6
A
TYR
7
n
7
TYR
7
A
LEU
8
n
8
LEU
8
A
ASP
9
n
9
ASP
9
A
VAL
10
n
10
VAL
10
A
ASP
11
n
11
ASP
11
A
ALA
12
n
12
ALA
12
A
ASN
13
n
13
ASN
13
A
GLY
14
n
14
GLY
14
A
LYS
15
n
15
LYS
15
A
PRO
16
n
16
PRO
16
A
LEU
17
n
17
LEU
17
A
GLY
18
n
18
GLY
18
A
ARG
19
n
19
ARG
19
A
VAL
20
n
20
VAL
20
A
VAL
21
n
21
VAL
21
A
LEU
22
n
22
LEU
22
A
GLU
23
n
23
GLU
23
A
LEU
24
n
24
LEU
24
A
LYS
25
n
25
LYS
25
A
ALA
26
n
26
ALA
26
A
ASP
27
n
27
ASP
27
A
VAL
28
n
28
VAL
28
A
VAL
29
n
29
VAL
29
A
PRO
30
n
30
PRO
30
A
LYS
31
n
31
LYS
31
A
THR
32
n
32
THR
32
A
ALA
33
n
33
ALA
33
A
GLU
34
n
34
GLU
34
A
ASN
35
n
35
ASN
35
A
PHE
36
n
36
PHE
36
A
ARG
37
n
37
ARG
37
A
ALA
38
n
38
ALA
38
A
LEU
39
n
39
LEU
39
A
CYS
40
n
40
CYS
40
A
THR
41
n
41
THR
41
A
GLY
42
n
42
GLY
42
A
GLU
43
n
43
GLU
43
A
LYS
44
n
44
LYS
44
A
GLY
45
n
45
GLY
45
A
PHE
46
n
46
PHE
46
A
GLY
47
n
47
GLY
47
A
TYR
48
n
48
TYR
48
A
LYS
49
n
49
LYS
49
A
GLY
50
n
50
GLY
50
A
SER
51
n
51
SER
51
A
THR
52
n
52
THR
52
A
PHE
53
n
53
PHE
53
A
HIS
54
n
54
HIS
54
A
ARG
55
n
55
ARG
55
A
VAL
56
n
56
VAL
56
A
ILE
57
n
57
ILE
57
A
PRO
58
n
58
PRO
58
A
SER
59
n
59
SER
59
A
PHE
60
n
60
PHE
60
A
MET
61
n
61
MET
61
A
CYS
62
n
62
CYS
62
A
GLN
63
n
63
GLN
63
A
ALA
64
n
64
ALA
64
A
GLY
65
n
65
GLY
65
A
ASP
66
n
66
ASP
66
A
PHE
67
n
67
PHE
67
A
THR
68
n
68
THR
68
A
ASN
69
n
69
ASN
69
A
HIS
70
n
70
HIS
70
A
ASN
71
n
71
ASN
71
A
GLY
72
n
72
GLY
72
A
THR
73
n
73
THR
73
A
GLY
74
n
74
GLY
74
A
GLY
75
n
75
GLY
75
A
LYS
76
n
76
LYS
76
A
SER
77
n
77
SER
77
A
ILE
78
n
78
ILE
78
A
TYR
79
n
79
TYR
79
A
GLY
80
n
80
GLY
80
A
SER
81
n
81
SER
81
A
ARG
82
n
82
ARG
82
A
PHE
83
n
83
PHE
83
A
PRO
84
n
84
PRO
84
A
ASP
85
n
85
ASP
85
A
GLU
86
n
86
GLU
86
A
ASN
87
n
87
ASN
87
A
PHE
88
n
88
PHE
88
A
THR
89
n
89
THR
89
A
LEU
90
n
90
LEU
90
A
LYS
91
n
91
LYS
91
A
HIS
92
n
92
HIS
92
A
VAL
93
n
93
VAL
93
A
GLY
94
n
94
GLY
94
A
PRO
95
n
95
PRO
95
A
GLY
96
n
96
GLY
96
A
VAL
97
n
97
VAL
97
A
LEU
98
n
98
LEU
98
A
SER
99
n
99
SER
99
A
MET
100
n
100
MET
100
A
ALA
101
n
101
ALA
101
A
ASN
102
n
102
ASN
102
A
ALA
103
n
103
ALA
103
A
GLY
104
n
104
GLY
104
A
PRO
105
n
105
PRO
105
A
ASN
106
n
106
ASN
106
A
THR
107
n
107
THR
107
A
ASN
108
n
108
ASN
108
A
GLY
109
n
109
GLY
109
A
SER
110
n
110
SER
110
A
GLN
111
n
111
GLN
111
A
PHE
112
n
112
PHE
112
A
PHE
113
n
113
PHE
113
A
ILE
114
n
114
ILE
114
A
CYS
115
n
115
CYS
115
A
THR
116
n
116
THR
116
A
ILE
117
n
117
ILE
117
A
LYS
118
n
118
LYS
118
A
THR
119
n
119
THR
119
A
ASP
120
n
120
ASP
120
A
TRP
121
n
121
TRP
121
A
LEU
122
n
122
LEU
122
A
ASP
123
n
123
ASP
123
A
GLY
124
n
124
GLY
124
A
LYS
125
n
125
LYS
125
A
HIS
126
n
126
HIS
126
A
VAL
127
n
127
VAL
127
A
VAL
128
n
128
VAL
128
A
PHE
129
n
129
PHE
129
A
GLY
130
n
130
GLY
130
A
HIS
131
n
131
HIS
131
A
VAL
132
n
132
VAL
132
A
ILE
133
n
133
ILE
133
A
GLU
134
n
134
GLU
134
A
GLY
135
n
135
GLY
135
A
MET
136
n
136
MET
136
A
ASP
137
n
137
ASP
137
A
VAL
138
n
138
VAL
138
A
VAL
139
n
139
VAL
139
A
LYS
140
n
140
LYS
140
A
LYS
141
n
141
LYS
141
A
ILE
142
n
142
ILE
142
A
GLU
143
n
143
GLU
143
A
SER
144
n
144
SER
144
A
PHE
145
n
145
PHE
145
A
GLY
146
n
146
GLY
146
A
SER
147
n
147
SER
147
A
LYS
148
n
148
LYS
148
A
SER
149
n
149
SER
149
A
GLY
150
n
150
GLY
150
A
ARG
151
n
151
ARG
151
A
THR
152
n
152
THR
152
A
SER
153
n
153
SER
153
A
LYS
154
n
154
LYS
154
A
LYS
155
n
155
LYS
155
A
ILE
156
n
156
ILE
156
A
VAL
157
n
157
VAL
157
A
ILE
158
n
158
ILE
158
A
THR
159
n
159
THR
159
A
ASP
160
n
160
ASP
160
A
CYS
161
n
161
CYS
161
A
GLY
162
n
162
GLY
162
A
GLN
163
n
163
GLN
163
A
LEU
164
n
164
LEU
164
A
SER
165
n
165
SER
165
A
author_and_software_defined_assembly
PISA
1
monomeric
1030
9
7220
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
1_555
135.2
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
1_555
116.0
A
PGE
204
E
O1
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
1_555
62.3
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
1_555
53.3
A
PGE
204
E
O1
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
1_555
103.2
A
PGE
204
E
O2
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
1_555
63.0
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
7_555
92.3
A
PGE
204
E
O1
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
7_555
47.4
A
PGE
204
E
O2
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
7_555
96.9
A
PGE
204
E
O3
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
7_555
93.4
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
7_555
73.4
A
PGE
204
E
O1
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
7_555
96.9
A
PGE
204
E
O2
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
7_555
158.4
A
PGE
204
E
O3
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
7_555
120.9
A
PGE
204
E
O1
PGE
7_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
7_555
62.3
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
118.0
A
PGE
204
E
O1
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
93.4
A
PGE
204
E
O2
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
120.9
A
PGE
204
E
O3
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
161.9
A
PGE
204
E
O1
PGE
7_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
103.2
A
PGE
204
E
O2
PGE
7_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
63.0
A
PGE
204
E
O4
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
131.7
A
PGE
204
E
O1
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
92.3
A
PGE
204
E
O2
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
73.4
A
PGE
204
E
O3
PGE
1_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
118.0
A
PGE
204
E
O1
PGE
7_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
135.2
A
PGE
204
E
O2
PGE
7_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
116.0
A
PGE
204
E
O3
PGE
7_555
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
53.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
55
A
N
ARG
55
A
O
GLN
63
A
O
GLN
63
A
N
CYS
62
A
N
CYS
62
A
O
ILE
114
A
O
ILE
114
A
O
PHE
113
A
O
PHE
113
A
N
SER
99
A
N
SER
99
A
N
LEU
98
A
N
LEU
98
A
O
PHE
129
A
O
PHE
129
A
O
ILE
133
A
O
ILE
133
A
N
VAL
21
A
N
VAL
21
A
O
LEU
17
A
O
LEU
17
A
N
VAL
10
A
N
VAL
10
A
N
ASP
9
A
N
ASP
9
A
O
ASP
160
A
O
ASP
160
1
A
K
201
B
K
1
A
MET
1
A
MET
1
1
Y
1
A
A
O
O
HOH
HOH
314
352
2.15
1
A
A
OD1
O
ASP
HOH
11
301
2.15
1
5.49
0.90
118.30
123.79
A
A
A
CB
CG
OD1
ASP
ASP
ASP
27
27
27
N
1
7.74
0.50
120.30
128.04
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
37
37
37
N
1
-5.20
0.50
120.30
115.10
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
82
82
82
N
1
-10.44
1.60
100.20
89.76
A
A
A
CG
SD
CE
MET
MET
MET
136
136
136
N
1
A
A
CD
OE1
GLU
GLU
43
43
0.068
0.011
1.252
1.320
N
1
A
A
CD
NE
ARG
ARG
55
55
-0.131
0.017
1.460
1.329
N
1
A
A
CZ
NH2
ARG
ARG
55
55
-0.087
0.013
1.326
1.239
N
1
A
A
CB
OG
SER
SER
81
81
-0.080
0.013
1.418
1.338
N
1
A
PHE
60
-144.23
-82.70
1
A
ASN
71
-153.21
9.09
1
A
THR
119
-118.31
59.29
16.182
0.00
0.00
0.00
0.00
0.00
-0.01
0.967
0.957
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.19719
0.16712
0.16859
1.40
40.6
1941
36789
5.0
99.51
0.779
0.032
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.052
0.056
0.80
0.80
1.20
2BIT
MAXIMUM LIKELIHOOD
MASK
1.40
40.6
132
1446
74
0
1240
0.029
0.019
1363
0.002
0.020
1300
2.615
2.014
1819
1.168
3.000
2995
6.591
5.000
163
33.730
24.231
52
12.510
15.000
213
16.712
15.000
5
0.134
0.200
186
0.012
0.021
1537
0.002
0.020
329
1.441
1.356
655
1.440
1.357
656
2.041
2.037
820
2.043
2.034
818
2.805
1.677
708
2.803
1.679
709
3.554
2.388
1000
4.814
12.480
1474
4.813
12.495
1475
0.260
0.227
1.436
129
2681
20
99.68
1.4
40.6
5CBU
38921
0.046
1
19.2
7.0
99.7
0.297
1.4
1.48
5.1
1
6.0
99.7
refinement
REFMAC
5.8.0123
data reduction
XDS
data scaling
SCALA
phasing
PHASER
Human Cyclophilin D Complexed with Inhibitor.
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
7
N
N
A
VAL
29
A
VAL
29
HELX_P
A
GLY
42
A
GLY
42
1
AA1
14
A
THR
119
A
THR
119
HELX_P
A
ASP
123
A
ASP
123
5
AA2
5
A
GLY
135
A
GLY
135
HELX_P
A
PHE
145
A
PHE
145
1
AA3
11
metalc
2.976
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
1_555
metalc
3.100
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
1_555
metalc
2.603
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
1_555
metalc
2.889
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
1_555
metalc
3.100
A
K
201
B
K
K
1_555
A
PGE
204
E
O1
PGE
7_555
metalc
2.603
A
K
201
B
K
K
1_555
A
PGE
204
E
O2
PGE
7_555
metalc
2.889
A
K
201
B
K
K
1_555
A
PGE
204
E
O3
PGE
7_555
metalc
2.976
A
K
201
B
K
K
1_555
A
PGE
204
E
O4
PGE
7_555
ISOMERASE
cyclophilin, isomerase, complex, inhibitor
PPIF_HUMAN
UNP
1
44
P30405
GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGS
RFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDC
GQLS
44
207
5CBU
2
165
P30405
A
1
2
165
1
initiating methionine
MET
1
5CBU
A
P30405
UNP
1
1
LYS
engineered mutation
ILE
133
5CBU
A
P30405
UNP
175
133
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
53
A
PHE
53
A
ILE
57
A
ILE
57
A
MET
61
A
MET
61
A
ALA
64
A
ALA
64
A
PHE
112
A
PHE
112
A
CYS
115
A
CYS
115
A
VAL
97
A
VAL
97
A
MET
100
A
MET
100
A
VAL
128
A
VAL
128
A
GLU
134
A
GLU
134
A
LYS
15
A
LYS
15
A
LEU
24
A
LEU
24
A
LEU
5
A
LEU
5
A
ALA
12
A
ALA
12
A
ILE
156
A
ILE
156
A
GLN
163
A
GLN
163
binding site for residue K A 201
A
K
201
Software
2
binding site for residue PG4 A 202
A
PG4
202
Software
4
binding site for residue EDO A 203
A
EDO
203
Software
7
binding site for residue PGE A 204
A
PGE
204
Software
6
binding site for residue 4ZM A 205
A
4ZM
205
Software
14
binding site for residue 4ZM A 206
A
4ZM
206
Software
10
A
PGE
204
E
PGE
2
7_555
A
PGE
204
E
PGE
2
1_555
A
VAL
93
A
VAL
93
4
1_555
A
PRO
95
A
PRO
95
4
1_555
A
HIS
131
A
HIS
131
4
1_555
A
HOH
357
H
HOH
4
1_555
A
PHE
46
A
PHE
46
7
1_555
A
GLY
47
A
GLY
47
7
1_555
A
LYS
49
A
LYS
49
7
1_555
A
HOH
328
H
HOH
7
1_555
A
HOH
399
H
HOH
7
1_555
A
HOH
409
H
HOH
7
1_555
A
HOH
410
H
HOH
7
1_555
A
PRO
58
A
PRO
58
6
1_555
A
SER
59
A
SER
59
6
1_555
A
TRP
121
A
TRP
121
6
1_555
A
LYS
148
A
LYS
148
6
7_555
A
K
201
B
K
6
7_555
A
K
201
B
K
6
1_555
A
ARG
55
A
ARG
55
14
1_555
A
GLN
63
A
GLN
63
14
1_555
A
GLY
72
A
GLY
72
14
1_555
A
THR
73
A
THR
73
14
1_555
A
THR
73
A
THR
73
14
7_555
A
ARG
82
A
ARG
82
14
1_555
A
ALA
101
A
ALA
101
14
1_555
A
ASN
102
A
ASN
102
14
1_555
A
ALA
103
A
ALA
103
14
1_555
A
THR
107
A
THR
107
14
1_555
A
GLN
111
A
GLN
111
14
1_555
A
PHE
113
A
PHE
113
14
1_555
A
HIS
126
A
HIS
126
14
1_555
A
HOH
375
H
HOH
14
1_555
A
THR
52
A
THR
52
10
1_555
A
HIS
54
A
HIS
54
10
1_555
A
HIS
70
A
HIS
70
10
1_555
A
ASN
71
A
ASN
71
10
1_555
A
ALA
103
A
ALA
103
10
7_555
A
GLY
104
A
GLY
104
10
7_555
A
SER
153
A
SER
153
10
1_555
A
LYS
154
A
LYS
154
10
1_555
A
LYS
155
A
LYS
155
10
1_555
A
HOH
303
H
HOH
10
1_555
96
P 43 21 2