0.013617
0.007862
0.000000
0.000000
0.015724
0.000000
0.000000
0.000000
0.006321
0.000000
0.000000
0.000000
Rondelet, G.
DAL MASO, T.
Willems, L.
Wouters, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.000
90.000
120.000
73.437
73.437
158.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H21 N2 O2 1
189.275
n
N-TRIMETHYLLYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
N
N
237
N
C
N
238
N
O
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
N
269
N
C
N
270
N
S
N
271
N
C
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
N
312
N
C
N
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
O
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
R
C
N
343
N
O
N
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
N
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
N
393
N
O
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
N
411
N
C
N
412
N
C
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
Y
281
N
doub
Y
282
N
sing
Y
283
N
sing
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
doub
N
288
N
sing
Y
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
Y
350
N
doub
Y
351
N
sing
Y
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
sing
Y
359
N
doub
N
360
N
sing
Y
361
N
doub
N
362
N
sing
Y
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
US
J.Struct.Biol.
JSBIEM
0803
1095-8657
194
357
367
10.1016/j.jsb.2016.03.013
26993463
Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B.
2016
10.2210/pdb5ciu/pdb
pdb_00005ciu
100
1
X-RAY FLUORESCCENCE DETECTOR
CCD
2014-06-27
ADSC QUANTUM 315r
CRYOGENICALLY COOLED CHANNEL-CUT SI[111]
SINGLE WAVELENGTH
M
x-ray
1
0.9801
1.0
PROXIMA 2
SOLEIL
0.9801
SYNCHROTRON
SOLEIL BEAMLINE PROXIMA 2
16698.844
DNA (cytosine-5)-methyltransferase 3B
2.1.1.37
2
man
polymer
1671.964
Histone H3.2
2
syn
polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
163
nat
water
Dnmt3b,DNA methyltransferase HsaIIIB,M.HsaIIIB
Histone H3/m,Histone H3/o
no
no
EADSGDGDSSEYQDGKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMSGMRWVQWFGDGKFSEVSADKLVALGLFSQ
HFNLATFNKLVSYRKAMYHALEKARVRAGKTFPSSPGDSLEDQLKPMLEWAHGGFKPTGIEGLKPNNTQP
EADSGDGDSSEYQDGKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMSGMRWVQWFGDGKFSEVSADKLVALGLFSQ
HFNLATFNKLVSYRKAMYHALEKARVRAGKTFPSSPGDSLEDQLKPMLEWAHGGFKPTGIEGLKPNNTQP
A,B
polypeptide(L)
no
yes
SAPATGGV(M3L)KPHRYR
SAPATGGVKKPHRYR
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
150
DNMT3B
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
PLASMID
Biological sequence
pET28-MHL
1
3.35
63.30
VAPOR DIFFUSION, SITTING DROP
6.5
1.6M SODIUM CITRATE TRIBASIC
298
atom_site
audit_author
database_PDB_rev
database_PDB_rev_record
pdbx_unobs_or_zero_occ_atoms
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_unobs_or_zero_occ_atoms
repository
Initial release
Database references
Advisory
Atomic model
Data collection
Structure summary
Advisory
Data collection
Database references
Refinement description
1
0
2016-03-30
1
1
2016-05-04
2
0
2019-06-12
2
1
2024-01-10
_atom_site.occupancy
_audit_author.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
RCSB
Y
PDBE
2015-07-13
REL
REL
1
A
O
HOH
496
6.80
1
A
O
HOH
497
7.83
GOL
GLYCEROL
HOH
water
9606
Human
Homo sapiens
sample
1
15
3QKJ
PDB
experimental model
GOL
6
3
GOL
GOL
401
B
HOH
53
4
HOH
HOH
401
A
HOH
24
4
HOH
HOH
402
A
HOH
39
4
HOH
HOH
403
A
HOH
3
4
HOH
HOH
404
A
HOH
25
4
HOH
HOH
405
A
HOH
63
4
HOH
HOH
406
A
HOH
26
4
HOH
HOH
407
A
HOH
41
4
HOH
HOH
408
A
HOH
7
4
HOH
HOH
409
A
HOH
43
4
HOH
HOH
410
A
HOH
20
4
HOH
HOH
411
A
HOH
17
4
HOH
HOH
412
A
HOH
52
4
HOH
HOH
413
A
HOH
4
4
HOH
HOH
414
A
HOH
8
4
HOH
HOH
415
A
HOH
1
4
HOH
HOH
416
A
HOH
32
4
HOH
HOH
417
A
HOH
1
4
HOH
HOH
418
A
HOH
58
4
HOH
HOH
419
A
HOH
10
4
HOH
HOH
420
A
HOH
50
4
HOH
HOH
421
A
HOH
21
4
HOH
HOH
422
A
HOH
13
4
HOH
HOH
423
A
HOH
9
4
HOH
HOH
424
A
HOH
54
4
HOH
HOH
425
A
HOH
2
4
HOH
HOH
426
A
HOH
38
4
HOH
HOH
427
A
HOH
18
4
HOH
HOH
428
A
HOH
19
4
HOH
HOH
429
A
HOH
2
4
HOH
HOH
430
A
HOH
15
4
HOH
HOH
431
A
HOH
55
4
HOH
HOH
432
A
HOH
49
4
HOH
HOH
433
A
HOH
46
4
HOH
HOH
434
A
HOH
31
4
HOH
HOH
435
A
HOH
28
4
HOH
HOH
436
A
HOH
37
4
HOH
HOH
437
A
HOH
5
4
HOH
HOH
438
A
HOH
12
4
HOH
HOH
439
A
HOH
22
4
HOH
HOH
440
A
HOH
27
4
HOH
HOH
441
A
HOH
16
4
HOH
HOH
442
A
HOH
11
4
HOH
HOH
443
A
HOH
44
4
HOH
HOH
444
A
HOH
35
4
HOH
HOH
445
A
HOH
60
4
HOH
HOH
446
A
HOH
14
4
HOH
HOH
447
A
HOH
47
4
HOH
HOH
448
A
HOH
45
4
HOH
HOH
449
A
HOH
34
4
HOH
HOH
450
A
HOH
65
4
HOH
HOH
451
A
HOH
61
4
HOH
HOH
452
A
HOH
67
4
HOH
HOH
453
A
HOH
23
4
HOH
HOH
454
A
HOH
7
4
HOH
HOH
455
A
HOH
33
4
HOH
HOH
456
A
HOH
59
4
HOH
HOH
457
A
HOH
2
4
HOH
HOH
458
A
HOH
48
4
HOH
HOH
459
A
HOH
64
4
HOH
HOH
460
A
HOH
66
4
HOH
HOH
461
A
HOH
62
4
HOH
HOH
462
A
HOH
84
4
HOH
HOH
463
A
HOH
29
4
HOH
HOH
464
A
HOH
97
4
HOH
HOH
465
A
HOH
44
4
HOH
HOH
466
A
HOH
71
4
HOH
HOH
467
A
HOH
36
4
HOH
HOH
468
A
HOH
94
4
HOH
HOH
469
A
HOH
30
4
HOH
HOH
470
A
HOH
40
4
HOH
HOH
471
A
HOH
76
4
HOH
HOH
472
A
HOH
74
4
HOH
HOH
473
A
HOH
86
4
HOH
HOH
474
A
HOH
68
4
HOH
HOH
475
A
HOH
77
4
HOH
HOH
476
A
HOH
80
4
HOH
HOH
477
A
HOH
82
4
HOH
HOH
478
A
HOH
56
4
HOH
HOH
479
A
HOH
47
4
HOH
HOH
480
A
HOH
72
4
HOH
HOH
481
A
HOH
75
4
HOH
HOH
482
A
HOH
87
4
HOH
HOH
483
A
HOH
57
4
HOH
HOH
484
A
HOH
93
4
HOH
HOH
485
A
HOH
79
4
HOH
HOH
486
A
HOH
69
4
HOH
HOH
487
A
HOH
88
4
HOH
HOH
488
A
HOH
49
4
HOH
HOH
489
A
HOH
78
4
HOH
HOH
490
A
HOH
81
4
HOH
HOH
491
A
HOH
73
4
HOH
HOH
492
A
HOH
46
4
HOH
HOH
493
A
HOH
89
4
HOH
HOH
494
A
HOH
90
4
HOH
HOH
495
A
HOH
92
4
HOH
HOH
496
A
HOH
96
4
HOH
HOH
497
A
HOH
40
4
HOH
HOH
501
B
HOH
7
4
HOH
HOH
502
B
HOH
37
4
HOH
HOH
503
B
HOH
11
4
HOH
HOH
504
B
HOH
10
4
HOH
HOH
505
B
HOH
20
4
HOH
HOH
506
B
HOH
16
4
HOH
HOH
507
B
HOH
26
4
HOH
HOH
508
B
HOH
1
4
HOH
HOH
509
B
HOH
17
4
HOH
HOH
510
B
HOH
1
4
HOH
HOH
511
B
HOH
2
4
HOH
HOH
512
B
HOH
29
4
HOH
HOH
513
B
HOH
21
4
HOH
HOH
514
B
HOH
12
4
HOH
HOH
515
B
HOH
31
4
HOH
HOH
516
B
HOH
3
4
HOH
HOH
517
B
HOH
33
4
HOH
HOH
518
B
HOH
42
4
HOH
HOH
519
B
HOH
9
4
HOH
HOH
520
B
HOH
8
4
HOH
HOH
521
B
HOH
6
4
HOH
HOH
522
B
HOH
4
4
HOH
HOH
523
B
HOH
14
4
HOH
HOH
524
B
HOH
19
4
HOH
HOH
525
B
HOH
6
4
HOH
HOH
526
B
HOH
34
4
HOH
HOH
527
B
HOH
39
4
HOH
HOH
528
B
HOH
5
4
HOH
HOH
529
B
HOH
27
4
HOH
HOH
530
B
HOH
30
4
HOH
HOH
531
B
HOH
5
4
HOH
HOH
532
B
HOH
28
4
HOH
HOH
533
B
HOH
35
4
HOH
HOH
534
B
HOH
36
4
HOH
HOH
535
B
HOH
15
4
HOH
HOH
536
B
HOH
51
4
HOH
HOH
537
B
HOH
32
4
HOH
HOH
538
B
HOH
50
4
HOH
HOH
539
B
HOH
42
4
HOH
HOH
540
B
HOH
25
4
HOH
HOH
541
B
HOH
83
4
HOH
HOH
542
B
HOH
24
4
HOH
HOH
543
B
HOH
23
4
HOH
HOH
544
B
HOH
85
4
HOH
HOH
545
B
HOH
18
4
HOH
HOH
546
B
HOH
95
4
HOH
HOH
547
B
HOH
48
4
HOH
HOH
548
B
HOH
70
4
HOH
HOH
549
B
HOH
13
4
HOH
HOH
550
B
HOH
41
4
HOH
HOH
551
B
HOH
45
4
HOH
HOH
552
B
HOH
51
4
HOH
HOH
553
B
HOH
43
4
HOH
HOH
554
B
HOH
6
4
HOH
HOH
101
C
HOH
3
4
HOH
HOH
102
C
HOH
4
4
HOH
HOH
103
C
HOH
7
4
HOH
HOH
104
C
HOH
6
4
HOH
HOH
101
D
HOH
4
4
HOH
HOH
102
D
HOH
9
4
HOH
HOH
103
D
HOH
3
4
HOH
HOH
104
D
HOH
8
4
HOH
HOH
105
D
HOH
5
4
HOH
HOH
106
D
HOH
91
4
HOH
HOH
107
D
HOH
38
4
HOH
HOH
108
D
5.220
5.220
40.590
40.590
n
1
206
A
n
2
207
A
n
3
208
A
n
4
209
A
n
5
210
A
n
6
211
A
n
7
212
A
n
8
213
A
n
9
214
A
n
10
215
A
GLU
216
n
11
GLU
216
A
TYR
217
n
12
TYR
217
A
GLN
218
n
13
GLN
218
A
ASP
219
n
14
ASP
219
A
GLY
220
n
15
GLY
220
A
LYS
221
n
16
LYS
221
A
GLU
222
n
17
GLU
222
A
PHE
223
n
18
PHE
223
A
GLY
224
n
19
GLY
224
A
ILE
225
n
20
ILE
225
A
GLY
226
n
21
GLY
226
A
ASP
227
n
22
ASP
227
A
LEU
228
n
23
LEU
228
A
VAL
229
n
24
VAL
229
A
TRP
230
n
25
TRP
230
A
GLY
231
n
26
GLY
231
A
LYS
232
n
27
LYS
232
A
ILE
233
n
28
ILE
233
A
LYS
234
n
29
LYS
234
A
GLY
235
n
30
GLY
235
A
PHE
236
n
31
PHE
236
A
SER
237
n
32
SER
237
A
TRP
238
n
33
TRP
238
A
TRP
239
n
34
TRP
239
A
PRO
240
n
35
PRO
240
A
ALA
241
n
36
ALA
241
A
MET
242
n
37
MET
242
A
VAL
243
n
38
VAL
243
A
VAL
244
n
39
VAL
244
A
SER
245
n
40
SER
245
A
TRP
246
n
41
TRP
246
A
LYS
247
n
42
LYS
247
A
ALA
248
n
43
ALA
248
A
THR
249
n
44
THR
249
A
SER
250
n
45
SER
250
A
LYS
251
n
46
LYS
251
A
ARG
252
n
47
ARG
252
A
GLN
253
n
48
GLN
253
A
ALA
254
n
49
ALA
254
A
MET
255
n
50
MET
255
A
SER
256
n
51
SER
256
A
GLY
257
n
52
GLY
257
A
MET
258
n
53
MET
258
A
ARG
259
n
54
ARG
259
A
TRP
260
n
55
TRP
260
A
VAL
261
n
56
VAL
261
A
GLN
262
n
57
GLN
262
A
TRP
263
n
58
TRP
263
A
PHE
264
n
59
PHE
264
A
GLY
265
n
60
GLY
265
A
ASP
266
n
61
ASP
266
A
GLY
267
n
62
GLY
267
A
LYS
268
n
63
LYS
268
A
PHE
269
n
64
PHE
269
A
SER
270
n
65
SER
270
A
GLU
271
n
66
GLU
271
A
VAL
272
n
67
VAL
272
A
SER
273
n
68
SER
273
A
ALA
274
n
69
ALA
274
A
ASP
275
n
70
ASP
275
A
LYS
276
n
71
LYS
276
A
LEU
277
n
72
LEU
277
A
VAL
278
n
73
VAL
278
A
ALA
279
n
74
ALA
279
A
LEU
280
n
75
LEU
280
A
GLY
281
n
76
GLY
281
A
LEU
282
n
77
LEU
282
A
PHE
283
n
78
PHE
283
A
SER
284
n
79
SER
284
A
GLN
285
n
80
GLN
285
A
HIS
286
n
81
HIS
286
A
PHE
287
n
82
PHE
287
A
ASN
288
n
83
ASN
288
A
LEU
289
n
84
LEU
289
A
ALA
290
n
85
ALA
290
A
THR
291
n
86
THR
291
A
PHE
292
n
87
PHE
292
A
ASN
293
n
88
ASN
293
A
LYS
294
n
89
LYS
294
A
LEU
295
n
90
LEU
295
A
VAL
296
n
91
VAL
296
A
SER
297
n
92
SER
297
A
TYR
298
n
93
TYR
298
A
ARG
299
n
94
ARG
299
A
LYS
300
n
95
LYS
300
A
ALA
301
n
96
ALA
301
A
MET
302
n
97
MET
302
A
TYR
303
n
98
TYR
303
A
HIS
304
n
99
HIS
304
A
ALA
305
n
100
ALA
305
A
LEU
306
n
101
LEU
306
A
GLU
307
n
102
GLU
307
A
LYS
308
n
103
LYS
308
A
ALA
309
n
104
ALA
309
A
ARG
310
n
105
ARG
310
A
VAL
311
n
106
VAL
311
A
ARG
312
n
107
ARG
312
A
ALA
313
n
108
ALA
313
A
GLY
314
n
109
GLY
314
A
LYS
315
n
110
LYS
315
A
THR
316
n
111
THR
316
A
PHE
317
n
112
PHE
317
A
n
113
318
A
n
114
319
A
n
115
320
A
n
116
321
A
n
117
322
A
n
118
323
A
n
119
324
A
n
120
325
A
n
121
326
A
ASP
327
n
122
ASP
327
A
GLN
328
n
123
GLN
328
A
LEU
329
n
124
LEU
329
A
LYS
330
n
125
LYS
330
A
PRO
331
n
126
PRO
331
A
MET
332
n
127
MET
332
A
LEU
333
n
128
LEU
333
A
GLU
334
n
129
GLU
334
A
TRP
335
n
130
TRP
335
A
ALA
336
n
131
ALA
336
A
HIS
337
n
132
HIS
337
A
GLY
338
n
133
GLY
338
A
GLY
339
n
134
GLY
339
A
PHE
340
n
135
PHE
340
A
LYS
341
n
136
LYS
341
A
PRO
342
n
137
PRO
342
A
THR
343
n
138
THR
343
A
GLY
344
n
139
GLY
344
A
ILE
345
n
140
ILE
345
A
GLU
346
n
141
GLU
346
A
GLY
347
n
142
GLY
347
A
LEU
348
n
143
LEU
348
A
LYS
349
n
144
LYS
349
A
PRO
350
n
145
PRO
350
A
ASN
351
n
146
ASN
351
A
n
147
352
A
n
148
353
A
n
149
354
A
n
150
355
A
n
1
206
B
n
2
207
B
n
3
208
B
n
4
209
B
n
5
210
B
n
6
211
B
n
7
212
B
n
8
213
B
n
9
214
B
n
10
215
B
GLU
216
n
11
GLU
216
B
TYR
217
n
12
TYR
217
B
GLN
218
n
13
GLN
218
B
ASP
219
n
14
ASP
219
B
GLY
220
n
15
GLY
220
B
LYS
221
n
16
LYS
221
B
GLU
222
n
17
GLU
222
B
PHE
223
n
18
PHE
223
B
GLY
224
n
19
GLY
224
B
ILE
225
n
20
ILE
225
B
GLY
226
n
21
GLY
226
B
ASP
227
n
22
ASP
227
B
LEU
228
n
23
LEU
228
B
VAL
229
n
24
VAL
229
B
TRP
230
n
25
TRP
230
B
GLY
231
n
26
GLY
231
B
LYS
232
n
27
LYS
232
B
ILE
233
n
28
ILE
233
B
LYS
234
n
29
LYS
234
B
GLY
235
n
30
GLY
235
B
PHE
236
n
31
PHE
236
B
SER
237
n
32
SER
237
B
TRP
238
n
33
TRP
238
B
TRP
239
n
34
TRP
239
B
PRO
240
n
35
PRO
240
B
ALA
241
n
36
ALA
241
B
MET
242
n
37
MET
242
B
VAL
243
n
38
VAL
243
B
VAL
244
n
39
VAL
244
B
SER
245
n
40
SER
245
B
TRP
246
n
41
TRP
246
B
LYS
247
n
42
LYS
247
B
ALA
248
n
43
ALA
248
B
THR
249
n
44
THR
249
B
SER
250
n
45
SER
250
B
LYS
251
n
46
LYS
251
B
ARG
252
n
47
ARG
252
B
GLN
253
n
48
GLN
253
B
ALA
254
n
49
ALA
254
B
MET
255
n
50
MET
255
B
SER
256
n
51
SER
256
B
GLY
257
n
52
GLY
257
B
MET
258
n
53
MET
258
B
ARG
259
n
54
ARG
259
B
TRP
260
n
55
TRP
260
B
VAL
261
n
56
VAL
261
B
GLN
262
n
57
GLN
262
B
TRP
263
n
58
TRP
263
B
PHE
264
n
59
PHE
264
B
GLY
265
n
60
GLY
265
B
ASP
266
n
61
ASP
266
B
GLY
267
n
62
GLY
267
B
LYS
268
n
63
LYS
268
B
PHE
269
n
64
PHE
269
B
SER
270
n
65
SER
270
B
GLU
271
n
66
GLU
271
B
VAL
272
n
67
VAL
272
B
SER
273
n
68
SER
273
B
ALA
274
n
69
ALA
274
B
ASP
275
n
70
ASP
275
B
LYS
276
n
71
LYS
276
B
LEU
277
n
72
LEU
277
B
VAL
278
n
73
VAL
278
B
ALA
279
n
74
ALA
279
B
LEU
280
n
75
LEU
280
B
GLY
281
n
76
GLY
281
B
LEU
282
n
77
LEU
282
B
PHE
283
n
78
PHE
283
B
SER
284
n
79
SER
284
B
GLN
285
n
80
GLN
285
B
HIS
286
n
81
HIS
286
B
PHE
287
n
82
PHE
287
B
ASN
288
n
83
ASN
288
B
LEU
289
n
84
LEU
289
B
n
85
290
B
n
86
291
B
PHE
292
n
87
PHE
292
B
ASN
293
n
88
ASN
293
B
LYS
294
n
89
LYS
294
B
LEU
295
n
90
LEU
295
B
VAL
296
n
91
VAL
296
B
SER
297
n
92
SER
297
B
TYR
298
n
93
TYR
298
B
ARG
299
n
94
ARG
299
B
LYS
300
n
95
LYS
300
B
ALA
301
n
96
ALA
301
B
MET
302
n
97
MET
302
B
TYR
303
n
98
TYR
303
B
HIS
304
n
99
HIS
304
B
ALA
305
n
100
ALA
305
B
LEU
306
n
101
LEU
306
B
GLU
307
n
102
GLU
307
B
LYS
308
n
103
LYS
308
B
ALA
309
n
104
ALA
309
B
ARG
310
n
105
ARG
310
B
VAL
311
n
106
VAL
311
B
ARG
312
n
107
ARG
312
B
ALA
313
n
108
ALA
313
B
GLY
314
n
109
GLY
314
B
LYS
315
n
110
LYS
315
B
n
111
316
B
n
112
317
B
n
113
318
B
n
114
319
B
n
115
320
B
n
116
321
B
n
117
322
B
n
118
323
B
n
119
324
B
n
120
325
B
n
121
326
B
n
122
327
B
n
123
328
B
LEU
329
n
124
LEU
329
B
LYS
330
n
125
LYS
330
B
PRO
331
n
126
PRO
331
B
MET
332
n
127
MET
332
B
LEU
333
n
128
LEU
333
B
GLU
334
n
129
GLU
334
B
TRP
335
n
130
TRP
335
B
ALA
336
n
131
ALA
336
B
HIS
337
n
132
HIS
337
B
GLY
338
n
133
GLY
338
B
GLY
339
n
134
GLY
339
B
PHE
340
n
135
PHE
340
B
LYS
341
n
136
LYS
341
B
PRO
342
n
137
PRO
342
B
THR
343
n
138
THR
343
B
GLY
344
n
139
GLY
344
B
ILE
345
n
140
ILE
345
B
GLU
346
n
141
GLU
346
B
GLY
347
n
142
GLY
347
B
LEU
348
n
143
LEU
348
B
LYS
349
n
144
LYS
349
B
PRO
350
n
145
PRO
350
B
ASN
351
n
146
ASN
351
B
n
147
352
B
n
148
353
B
n
149
354
B
n
150
355
B
n
1
28
C
n
2
29
C
n
3
30
C
n
4
31
C
THR
32
n
5
THR
32
C
GLY
33
n
6
GLY
33
C
GLY
34
n
7
GLY
34
C
VAL
35
n
8
VAL
35
C
M3L
36
n
9
M3L
36
C
LYS
37
n
10
LYS
37
C
PRO
38
n
11
PRO
38
C
n
12
39
C
n
13
40
C
n
14
41
C
n
15
42
C
n
1
28
D
n
2
29
D
n
3
30
D
n
4
31
D
THR
32
n
5
THR
32
D
GLY
33
n
6
GLY
33
D
GLY
34
n
7
GLY
34
D
VAL
35
n
8
VAL
35
D
M3L
36
n
9
M3L
36
D
LYS
37
n
10
LYS
37
D
PRO
38
n
11
PRO
38
D
n
12
39
D
n
13
40
D
n
14
41
D
n
15
42
D
software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
2
dimeric
950
-9
7750
910
-8
7380
C
M3L
36
modified residue
C
M3L
9
LYS
D
M3L
36
modified residue
D
M3L
9
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
272
A
O
VAL
67
A
N
ARG
259
A
N
ARG
54
A
O
GLN
262
A
O
GLN
57
A
N
MET
242
A
N
MET
37
A
O
ALA
241
A
O
ALA
36
A
N
VAL
229
A
N
VAL
24
A
N
TRP
230
A
N
TRP
25
A
O
VAL
278
A
O
VAL
73
B
O
VAL
272
B
O
VAL
67
B
N
ARG
259
B
N
ARG
54
B
O
GLN
262
B
O
GLN
57
B
N
MET
242
B
N
MET
37
B
O
ALA
241
B
O
ALA
36
B
N
VAL
229
B
N
VAL
24
B
N
TRP
230
B
N
TRP
25
B
O
VAL
278
B
O
VAL
73
1
A
HOH
416
F
HOH
1
A
CG
LYS
234
A
CG
LYS
29
0
Y
1
A
CD
LYS
234
A
CD
LYS
29
0
Y
1
A
CE
LYS
234
A
CE
LYS
29
0
Y
1
A
NZ
LYS
234
A
NZ
LYS
29
0
Y
1
B
CB
LYS
234
B
CB
LYS
29
0
Y
1
B
CG
LYS
234
B
CG
LYS
29
0
Y
1
B
CD
LYS
234
B
CD
LYS
29
0
Y
1
B
CE
LYS
234
B
CE
LYS
29
0
Y
1
B
NZ
LYS
234
B
NZ
LYS
29
0
Y
1
B
CB
LYS
330
B
CB
LYS
125
0
Y
1
B
CG
LYS
330
B
CG
LYS
125
0
Y
1
B
CD
LYS
330
B
CD
LYS
125
0
Y
1
B
CE
LYS
330
B
CE
LYS
125
0
Y
1
B
NZ
LYS
330
B
NZ
LYS
125
0
Y
1
B
CB
GLU
334
B
CB
GLU
129
0
Y
1
B
CG
GLU
334
B
CG
GLU
129
0
Y
1
B
CD
GLU
334
B
CD
GLU
129
0
Y
1
B
OE1
GLU
334
B
OE1
GLU
129
0
Y
1
B
OE2
GLU
334
B
OE2
GLU
129
0
Y
1
B
CB
LYS
341
B
CB
LYS
136
0
Y
1
B
CG
LYS
341
B
CG
LYS
136
0
Y
1
B
CD
LYS
341
B
CD
LYS
136
0
Y
1
B
CE
LYS
341
B
CE
LYS
136
0
Y
1
B
NZ
LYS
341
B
NZ
LYS
136
0
Y
1
A
GLU
206
A
GLU
1
1
Y
1
A
ALA
207
A
ALA
2
1
Y
1
A
ASP
208
A
ASP
3
1
Y
1
A
SER
209
A
SER
4
1
Y
1
A
GLY
210
A
GLY
5
1
Y
1
A
ASP
211
A
ASP
6
1
Y
1
A
GLY
212
A
GLY
7
1
Y
1
A
ASP
213
A
ASP
8
1
Y
1
A
SER
214
A
SER
9
1
Y
1
A
SER
215
A
SER
10
1
Y
1
A
PRO
318
A
PRO
113
1
Y
1
A
SER
319
A
SER
114
1
Y
1
A
SER
320
A
SER
115
1
Y
1
A
PRO
321
A
PRO
116
1
Y
1
A
GLY
322
A
GLY
117
1
Y
1
A
ASP
323
A
ASP
118
1
Y
1
A
SER
324
A
SER
119
1
Y
1
A
LEU
325
A
LEU
120
1
Y
1
A
GLU
326
A
GLU
121
1
Y
1
A
ASN
352
A
ASN
147
1
Y
1
A
THR
353
A
THR
148
1
Y
1
A
GLN
354
A
GLN
149
1
Y
1
A
PRO
355
A
PRO
150
1
Y
1
B
GLU
206
B
GLU
1
1
Y
1
B
ALA
207
B
ALA
2
1
Y
1
B
ASP
208
B
ASP
3
1
Y
1
B
SER
209
B
SER
4
1
Y
1
B
GLY
210
B
GLY
5
1
Y
1
B
ASP
211
B
ASP
6
1
Y
1
B
GLY
212
B
GLY
7
1
Y
1
B
ASP
213
B
ASP
8
1
Y
1
B
SER
214
B
SER
9
1
Y
1
B
SER
215
B
SER
10
1
Y
1
B
ALA
290
B
ALA
85
1
Y
1
B
THR
291
B
THR
86
1
Y
1
B
THR
316
B
THR
111
1
Y
1
B
PHE
317
B
PHE
112
1
Y
1
B
PRO
318
B
PRO
113
1
Y
1
B
SER
319
B
SER
114
1
Y
1
B
SER
320
B
SER
115
1
Y
1
B
PRO
321
B
PRO
116
1
Y
1
B
GLY
322
B
GLY
117
1
Y
1
B
ASP
323
B
ASP
118
1
Y
1
B
SER
324
B
SER
119
1
Y
1
B
LEU
325
B
LEU
120
1
Y
1
B
GLU
326
B
GLU
121
1
Y
1
B
ASP
327
B
ASP
122
1
Y
1
B
GLN
328
B
GLN
123
1
Y
1
B
ASN
352
B
ASN
147
1
Y
1
B
THR
353
B
THR
148
1
Y
1
B
GLN
354
B
GLN
149
1
Y
1
B
PRO
355
B
PRO
150
1
Y
1
C
SER
28
C
SER
1
1
Y
1
C
ALA
29
C
ALA
2
1
Y
1
C
PRO
30
C
PRO
3
1
Y
1
C
ALA
31
C
ALA
4
1
Y
1
C
HIS
39
C
HIS
12
1
Y
1
C
ARG
40
C
ARG
13
1
Y
1
C
TYR
41
C
TYR
14
1
Y
1
C
ARG
42
C
ARG
15
1
Y
1
D
SER
28
D
SER
1
1
Y
1
D
ALA
29
D
ALA
2
1
Y
1
D
PRO
30
D
PRO
3
1
Y
1
D
ALA
31
D
ALA
4
1
Y
1
D
HIS
39
D
HIS
12
1
Y
1
D
ARG
40
D
ARG
13
1
Y
1
D
TYR
41
D
TYR
14
1
Y
1
D
ARG
42
D
ARG
15
1
Y
1
A
A
NZ
O
LYS
PHE
232
236
2.04
1
A
A
O
O
PRO
HOH
342
401
2.13
1
A
PHE
223
79.94
138.10
1
A
LYS
251
-117.30
-98.58
1
A
THR
316
-109.18
-63.14
1
B
TYR
217
81.94
19.15
1
B
LYS
251
-108.55
-95.83
98.990
46.4500
21.110
0.2588
0.2241
0.2268
2.2400
36.7180
1905
22531
24436
7.8000
99.7300
0.7870
0.3300
Random selection
1
FREE R-VALUE
1.380
MOLECULAR REPLACEMENT
27.7000
0.9000
1.1100
3QKJ
ML
FLAT BULK SOLVENT MODEL
2.2400
36.7180
163
2266
55.14
49.30
6
0
2097
262
0.009
2162
1.204
2898
0.087
282
0.005
354
13.937
774
0.3815
0.3168
2.2960
136
1604
1740
14
100.0000
0.3533
0.2992
2.3581
133
1568
1701
14
100.0000
0.3145
0.2788
2.4275
134
1580
1714
14
100.0000
0.3455
0.2885
2.5058
136
1582
1718
14
100.0000
0.3266
0.2736
2.5954
134
1584
1718
14
100.0000
0.3185
0.2609
2.6992
135
1596
1731
14
100.0000
0.3434
0.2564
2.8220
140
1612
1752
14
100.0000
0.3184
0.2481
2.9708
135
1571
1706
14
100.0000
0.3166
0.2465
3.1568
132
1606
1738
14
100.0000
0.2806
0.2253
3.4004
132
1616
1748
14
100.0000
0.2501
0.1978
3.7423
136
1633
1769
14
100.0000
0.1851
0.1904
4.2831
133
1632
1765
14
100.0000
0.2014
0.1836
5.3935
141
1653
1794
14
100.0000
0.2472
0.2347
36.7234
148
1694
1842
14
97.0000
49.900
0.999
2.240
50.0
5CIU
24436
-3.000
0.062
0.067
1.042
1
18.440
168485
6.9
99.500
0.846
0.633
2.240
2.370
2.950
26884
3872
3816
0.683
1
0
98.600
0.947
0.381
2.370
2.540
5.090
26368
3664
3664
0.411
1
0
100.000
0.981
0.207
2.540
2.740
9.270
24296
3386
3386
0.224
1
0
100.000
0.995
0.116
2.740
3.000
15.710
22510
3157
3156
0.125
1
0
100.000
0.997
0.070
3.000
3.350
24.510
20093
2881
2880
0.075
1
0
100.000
0.998
0.051
3.350
3.860
33.000
17037
2542
2541
0.055
1
0
100.000
0.998
0.045
3.860
4.720
37.130
14269
2174
2173
0.048
1
0
100.000
0.999
0.039
4.720
6.610
37.800
11104
1734
1731
0.043
1
0
99.800
0.999
0.032
6.610
37.580
5924
1061
998
0.035
1
0
94.100
refinement
PHENIX
data scaling
XSCALE
phasing
PHASER
2.5.2
data extraction
PDB_EXTRACT
3.15
data reduction
XDS
Structural basis of the recognition of H3K36me3 by DNMT3B PWWP domain
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
A
SER
245
A
SER
40
HELX_P
A
THR
249
A
THR
44
5
AA1
5
A
ASN
288
A
ASN
83
HELX_P
A
LEU
295
A
LEU
90
1
AA2
8
A
LEU
295
A
LEU
90
HELX_P
A
GLY
314
A
GLY
109
1
AA3
20
A
GLN
328
A
GLN
123
HELX_P
A
GLY
338
A
GLY
133
1
AA4
11
A
GLY
344
A
GLY
139
HELX_P
A
LYS
349
A
LYS
144
5
AA5
6
B
SER
245
B
SER
40
HELX_P
B
THR
249
B
THR
44
5
AA6
5
B
ASP
275
B
ASP
70
HELX_P
B
LEU
277
B
LEU
72
5
AA7
3
B
LEU
282
B
LEU
77
HELX_P
B
PHE
287
B
PHE
82
1
AA8
6
B
LEU
295
B
LEU
90
HELX_P
B
GLY
314
B
GLY
109
1
AA9
20
B
LYS
330
B
LYS
125
HELX_P
B
GLY
338
B
GLY
133
1
AB1
9
B
GLY
344
B
GLY
139
HELX_P
B
LEU
348
B
LEU
143
5
AB2
5
covale
1.329
both
C
VAL
35
C
C
VAL
8
1_555
C
M3L
36
C
N
M3L
9
1_555
covale
1.331
both
C
M3L
36
C
C
M3L
9
1_555
C
LYS
37
C
N
LYS
10
1_555
covale
1.336
both
D
VAL
35
D
C
VAL
8
1_555
D
M3L
36
D
N
M3L
9
1_555
covale
1.326
both
D
M3L
36
D
C
M3L
9
1_555
D
LYS
37
D
N
LYS
10
1_555
TRANSFERASE
PROTEIN-PEPTIDE COMPLEX, DNMT3B, PWWP DOMAIN, HISTONE BINDING, H3K36ME3, METHYLTRANSFERASE 3 BETA, S-ADENOSYL-L-METHIONINE, TRANSFERASE, ZINC-FINGER
A
LYS
341
A
LYS
136
1
A
PRO
342
A
PRO
137
9.11
B
ASP
219
B
ASP
14
1
B
GLY
220
B
GLY
15
-3.61
B
LYS
341
B
LYS
136
1
B
PRO
342
B
PRO
137
5.53
DNM3B_HUMAN
UNP
1
206
Q9UBC3
EADSGDGDSSEYQDGKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMSGMRWVQWFGDGKFSEVSADKLVALGLFSQ
HFNLATFNKLVSYRKAMYHALEKARVRAGKTFPSSPGDSLEDQLKPMLEWAHGGFKPTGIEGLKPNNTQP
5CIU
PDB
2
1
5CIU
206
355
5CIU
206
355
Q9UBC3
A
1
1
150
206
355
5CIU
206
355
Q9UBC3
B
1
1
150
28
42
5CIU
28
42
5CIU
C
2
1
15
28
42
5CIU
28
42
5CIU
D
2
1
15
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
269
A
PHE
64
A
SER
273
A
SER
68
A
MET
258
A
MET
53
A
TRP
263
A
TRP
58
A
TRP
239
A
TRP
34
A
VAL
244
A
VAL
39
A
LEU
228
A
LEU
23
A
GLY
231
A
GLY
26
A
LEU
277
A
LEU
72
A
ALA
279
A
ALA
74
B
PHE
269
B
PHE
64
B
SER
273
B
SER
68
B
MET
258
B
MET
53
B
TRP
263
B
TRP
58
B
TRP
239
B
TRP
34
B
VAL
244
B
VAL
39
B
LEU
228
B
LEU
23
B
GLY
231
B
GLY
26
B
VAL
278
B
VAL
73
B
ALA
279
B
ALA
74
binding site for residue GOL B 401
B
GOL
401
Software
2
B
ARG
252
B
ARG
47
2
1_555
C
VAL
35
C
VAL
8
2
1_555
154
P 32 2 1