0.019668
0.000000
0.000000
0.000000
0.019067
0.000000
0.000000
0.000000
0.014698
0.00000
0.00000
0.00000
Shi, K.
Kurahashi, K.
Aihara, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
50.843
52.448
68.035
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
O
N
90
N
P
N
91
N
O
N
92
N
O
N
93
N
O
N
94
N
C
N
95
R
C
N
96
N
O
N
97
S
C
N
98
N
O
N
99
N
C
N
100
R
C
N
101
N
N
N
102
N
C
N
103
N
O
N
104
N
N
N
105
N
C
N
106
N
N
N
107
N
C
N
108
N
C
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
C
N
124
N
O
N
125
N
C
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
N
N
134
S
C
N
135
N
C
N
136
N
O
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
N
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
N
N
154
S
C
N
155
N
C
N
156
N
O
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
N
N
173
N
C
N
174
N
C
N
175
N
O
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
Y
187
N
C
Y
188
N
N
Y
189
N
C
Y
190
N
C
Y
191
N
N
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
S
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
N
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
S
N
282
N
C
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
O
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
R
C
N
354
N
O
N
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
N
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
N
C
N
422
N
C
N
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
US
J.Biol.Chem.
JBCHA3
0071
1083-351X
290
28120
28130
10.1074/jbc.M115.679951
26416889
Crystal Structure of the DNA Deaminase APOBEC3B Catalytic Domain.
2015
10.2210/pdb5cqh/pdb
pdb_00005cqh
100
1
PIXEL
2014-11-24
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
24-ID-C
APS
0.979
SYNCHROTRON
APS BEAMLINE 24-ID-C
21978.963
DNA dC-dU-editing enzyme APOBEC-3B
3.5.4.-
UNP Residues 187-378
1
man
polymer
65.409
ZINC ION
1
syn
non-polymer
307.197
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
4
syn
non-polymer
18.015
water
185
nat
water
A3B,Phorbolin-1-related protein,Phorbolin-2/3
no
no
MEILRYLMDPDTFTSNFNNDPLVLRRRQTYLCYEVERLDNGTSVKMDQHMGFLCNESGRHAELRFLDLVPSLQLDPAQIY
RVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIKAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQG
CPFQPWDGLEEHSQALSGRLRAILQL
MEILRYLMDPDTFTSNFNNDPLVLRRRQTYLCYEVERLDNGTSVKMDQHMGFLCNESGRHAELRFLDLVPSLQLDPAQIY
RVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIKAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQG
CPFQPWDGLEEHSQALSGRLRAILQL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
186
APOBEC3B
9606
Homo sapiens
562
Escherichia coli
Biological sequence
2.06
40.40
VAPOR DIFFUSION, HANGING DROP
PEG 3350, MES-NaOH
293
pdbx_audit_support
pdbx_struct_oper_list
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Database references
Database references
Data collection
Author supporting evidence
Derived calculations
Author supporting evidence
Data collection
Database references
1
0
2015-10-07
1
1
2015-10-14
1
2
2015-12-02
1
3
2016-07-20
1
4
2017-09-27
1
5
2019-12-25
1
6
2024-03-06
_pdbx_audit_support.funding_organization
_pdbx_struct_oper_list.symmetry_operation
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
N
RCSB
Y
RCSB
2015-07-21
REL
REL
1
A
O
HOH
685
6.50
ZN
ZINC ION
DC
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
CL
CHLORIDE ION
EDO
1,2-ETHANEDIOL
HOH
water
ZN
2
2
ZN
ZN
401
A
Cd
1
3
DC
DC
402
A
CL
1
4
CL
CL
403
A
EDO
1
5
EDO
EDO
404
A
EDO
2
5
EDO
EDO
405
A
EDO
3
5
EDO
EDO
406
A
EDO
4
5
EDO
EDO
407
A
HOH
107
6
HOH
HOH
501
A
HOH
171
6
HOH
HOH
502
A
HOH
88
6
HOH
HOH
503
A
HOH
102
6
HOH
HOH
504
A
HOH
51
6
HOH
HOH
505
A
HOH
101
6
HOH
HOH
506
A
HOH
157
6
HOH
HOH
507
A
HOH
94
6
HOH
HOH
508
A
HOH
160
6
HOH
HOH
509
A
HOH
72
6
HOH
HOH
510
A
HOH
152
6
HOH
HOH
511
A
HOH
96
6
HOH
HOH
512
A
HOH
4
6
HOH
HOH
513
A
HOH
177
6
HOH
HOH
514
A
HOH
52
6
HOH
HOH
515
A
HOH
116
6
HOH
HOH
516
A
HOH
105
6
HOH
HOH
517
A
HOH
8
6
HOH
HOH
518
A
HOH
142
6
HOH
HOH
519
A
HOH
78
6
HOH
HOH
520
A
HOH
80
6
HOH
HOH
521
A
HOH
6
6
HOH
HOH
522
A
HOH
64
6
HOH
HOH
523
A
HOH
54
6
HOH
HOH
524
A
HOH
181
6
HOH
HOH
525
A
HOH
55
6
HOH
HOH
526
A
HOH
111
6
HOH
HOH
527
A
HOH
81
6
HOH
HOH
528
A
HOH
91
6
HOH
HOH
529
A
HOH
148
6
HOH
HOH
530
A
HOH
16
6
HOH
HOH
531
A
HOH
103
6
HOH
HOH
532
A
HOH
132
6
HOH
HOH
533
A
HOH
37
6
HOH
HOH
534
A
HOH
67
6
HOH
HOH
535
A
HOH
32
6
HOH
HOH
536
A
HOH
144
6
HOH
HOH
537
A
HOH
175
6
HOH
HOH
538
A
HOH
70
6
HOH
HOH
539
A
HOH
2
6
HOH
HOH
540
A
HOH
166
6
HOH
HOH
541
A
HOH
3
6
HOH
HOH
542
A
HOH
124
6
HOH
HOH
543
A
HOH
7
6
HOH
HOH
544
A
HOH
9
6
HOH
HOH
545
A
HOH
34
6
HOH
HOH
546
A
HOH
140
6
HOH
HOH
547
A
HOH
110
6
HOH
HOH
548
A
HOH
104
6
HOH
HOH
549
A
HOH
93
6
HOH
HOH
550
A
HOH
87
6
HOH
HOH
551
A
HOH
29
6
HOH
HOH
552
A
HOH
66
6
HOH
HOH
553
A
HOH
176
6
HOH
HOH
554
A
HOH
59
6
HOH
HOH
555
A
HOH
60
6
HOH
HOH
556
A
HOH
85
6
HOH
HOH
557
A
HOH
69
6
HOH
HOH
558
A
HOH
47
6
HOH
HOH
559
A
HOH
39
6
HOH
HOH
560
A
HOH
49
6
HOH
HOH
561
A
HOH
40
6
HOH
HOH
562
A
HOH
28
6
HOH
HOH
563
A
HOH
23
6
HOH
HOH
564
A
HOH
82
6
HOH
HOH
565
A
HOH
27
6
HOH
HOH
566
A
HOH
35
6
HOH
HOH
567
A
HOH
45
6
HOH
HOH
568
A
HOH
100
6
HOH
HOH
569
A
HOH
120
6
HOH
HOH
570
A
HOH
12
6
HOH
HOH
571
A
HOH
109
6
HOH
HOH
572
A
HOH
99
6
HOH
HOH
573
A
HOH
61
6
HOH
HOH
574
A
HOH
138
6
HOH
HOH
575
A
HOH
76
6
HOH
HOH
576
A
HOH
10
6
HOH
HOH
577
A
HOH
46
6
HOH
HOH
578
A
HOH
167
6
HOH
HOH
579
A
HOH
18
6
HOH
HOH
580
A
HOH
155
6
HOH
HOH
581
A
HOH
178
6
HOH
HOH
582
A
HOH
57
6
HOH
HOH
583
A
HOH
89
6
HOH
HOH
584
A
HOH
92
6
HOH
HOH
585
A
HOH
1
6
HOH
HOH
586
A
HOH
153
6
HOH
HOH
587
A
HOH
21
6
HOH
HOH
588
A
HOH
139
6
HOH
HOH
589
A
HOH
128
6
HOH
HOH
590
A
HOH
22
6
HOH
HOH
591
A
HOH
95
6
HOH
HOH
592
A
HOH
56
6
HOH
HOH
593
A
HOH
14
6
HOH
HOH
594
A
HOH
30
6
HOH
HOH
595
A
HOH
135
6
HOH
HOH
596
A
HOH
63
6
HOH
HOH
597
A
HOH
154
6
HOH
HOH
598
A
HOH
15
6
HOH
HOH
599
A
HOH
149
6
HOH
HOH
600
A
HOH
73
6
HOH
HOH
601
A
HOH
44
6
HOH
HOH
602
A
HOH
5
6
HOH
HOH
603
A
HOH
136
6
HOH
HOH
604
A
HOH
163
6
HOH
HOH
605
A
HOH
68
6
HOH
HOH
606
A
HOH
41
6
HOH
HOH
607
A
HOH
24
6
HOH
HOH
608
A
HOH
36
6
HOH
HOH
609
A
HOH
79
6
HOH
HOH
610
A
HOH
86
6
HOH
HOH
611
A
HOH
71
6
HOH
HOH
612
A
HOH
113
6
HOH
HOH
613
A
HOH
65
6
HOH
HOH
614
A
HOH
74
6
HOH
HOH
615
A
HOH
77
6
HOH
HOH
616
A
HOH
13
6
HOH
HOH
617
A
HOH
162
6
HOH
HOH
618
A
HOH
106
6
HOH
HOH
619
A
HOH
117
6
HOH
HOH
620
A
HOH
169
6
HOH
HOH
621
A
HOH
126
6
HOH
HOH
622
A
HOH
118
6
HOH
HOH
623
A
HOH
31
6
HOH
HOH
624
A
HOH
42
6
HOH
HOH
625
A
HOH
26
6
HOH
HOH
626
A
HOH
17
6
HOH
HOH
627
A
HOH
50
6
HOH
HOH
628
A
HOH
25
6
HOH
HOH
629
A
HOH
137
6
HOH
HOH
630
A
HOH
11
6
HOH
HOH
631
A
HOH
62
6
HOH
HOH
632
A
HOH
114
6
HOH
HOH
633
A
HOH
121
6
HOH
HOH
634
A
HOH
183
6
HOH
HOH
635
A
HOH
134
6
HOH
HOH
636
A
HOH
19
6
HOH
HOH
637
A
HOH
151
6
HOH
HOH
638
A
HOH
38
6
HOH
HOH
639
A
HOH
98
6
HOH
HOH
640
A
HOH
119
6
HOH
HOH
641
A
HOH
58
6
HOH
HOH
642
A
HOH
43
6
HOH
HOH
643
A
HOH
48
6
HOH
HOH
644
A
HOH
156
6
HOH
HOH
645
A
HOH
20
6
HOH
HOH
646
A
HOH
141
6
HOH
HOH
647
A
HOH
145
6
HOH
HOH
648
A
HOH
168
6
HOH
HOH
649
A
HOH
115
6
HOH
HOH
650
A
HOH
184
6
HOH
HOH
651
A
HOH
164
6
HOH
HOH
652
A
HOH
170
6
HOH
HOH
653
A
HOH
123
6
HOH
HOH
654
A
HOH
90
6
HOH
HOH
655
A
HOH
165
6
HOH
HOH
656
A
HOH
158
6
HOH
HOH
657
A
HOH
179
6
HOH
HOH
658
A
HOH
97
6
HOH
HOH
659
A
HOH
112
6
HOH
HOH
660
A
HOH
83
6
HOH
HOH
661
A
HOH
143
6
HOH
HOH
662
A
HOH
147
6
HOH
HOH
663
A
HOH
159
6
HOH
HOH
664
A
HOH
150
6
HOH
HOH
665
A
HOH
122
6
HOH
HOH
666
A
HOH
75
6
HOH
HOH
667
A
HOH
127
6
HOH
HOH
668
A
HOH
33
6
HOH
HOH
669
A
HOH
180
6
HOH
HOH
670
A
HOH
84
6
HOH
HOH
671
A
HOH
182
6
HOH
HOH
672
A
HOH
53
6
HOH
HOH
673
A
HOH
174
6
HOH
HOH
674
A
HOH
131
6
HOH
HOH
675
A
HOH
146
6
HOH
HOH
676
A
HOH
108
6
HOH
HOH
677
A
HOH
172
6
HOH
HOH
678
A
HOH
130
6
HOH
HOH
679
A
HOH
173
6
HOH
HOH
680
A
HOH
125
6
HOH
HOH
681
A
HOH
161
6
HOH
HOH
682
A
HOH
185
6
HOH
HOH
683
A
HOH
129
6
HOH
HOH
684
A
HOH
133
6
HOH
HOH
685
A
n
1
186
A
n
2
187
A
n
3
188
A
ALA
189
n
4
LEU
189
A
ARG
190
n
5
ARG
190
A
TYR
191
n
6
TYR
191
A
LEU
192
n
7
LEU
192
A
MET
193
n
8
MET
193
A
ASP
194
n
9
ASP
194
A
PRO
195
n
10
PRO
195
A
ASP
196
n
11
ASP
196
A
THR
197
n
12
THR
197
A
PHE
198
n
13
PHE
198
A
THR
199
n
14
THR
199
A
SER
200
n
15
SER
200
A
ASN
201
n
16
ASN
201
A
PHE
202
n
17
PHE
202
A
ASN
203
n
18
ASN
203
A
ASN
204
n
19
ASN
204
A
ASP
205
n
20
ASP
205
A
PRO
206
n
21
PRO
206
A
LEU
207
n
22
LEU
207
A
VAL
208
n
23
VAL
208
A
LEU
209
n
24
LEU
209
A
ARG
210
n
25
ARG
210
A
ARG
211
n
26
ARG
211
A
ARG
212
n
27
ARG
212
A
GLN
213
n
28
GLN
213
A
THR
214
n
29
THR
214
A
TYR
215
n
30
TYR
215
A
LEU
216
n
31
LEU
216
A
CYS
217
n
32
CYS
217
A
TYR
218
n
33
TYR
218
A
GLU
219
n
34
GLU
219
A
VAL
220
n
35
VAL
220
A
GLU
221
n
36
GLU
221
A
ARG
222
n
37
ARG
222
A
LEU
223
n
38
LEU
223
A
ASP
224
n
39
ASP
224
A
ASN
225
n
40
ASN
225
A
GLY
226
n
41
GLY
226
A
THR
227
n
42
THR
227
A
SER
228
n
43
SER
228
A
VAL
229
n
44
VAL
229
A
LYS
230
n
45
LYS
230
A
MET
231
n
46
MET
231
A
ASP
232
n
47
ASP
232
A
GLN
233
n
48
GLN
233
A
HIS
234
n
49
HIS
234
A
MET
235
n
50
MET
235
A
GLY
236
n
51
GLY
236
A
PHE
237
n
52
PHE
237
A
LEU
238
n
53
LEU
238
A
CYS
239
n
54
CYS
239
A
ASN
240
n
55
ASN
240
A
GLU
241
n
56
GLU
241
A
SER
250
n
57
SER
250
A
GLY
251
n
58
GLY
251
A
ARG
252
n
59
ARG
252
A
HIS
253
n
60
HIS
253
A
ALA
254
n
61
ALA
254
A
GLU
255
n
62
GLU
255
A
LEU
256
n
63
LEU
256
A
ARG
257
n
64
ARG
257
A
PHE
258
n
65
PHE
258
A
LEU
259
n
66
LEU
259
A
ASP
260
n
67
ASP
260
A
LEU
261
n
68
LEU
261
A
VAL
262
n
69
VAL
262
A
PRO
263
n
70
PRO
263
A
SER
264
n
71
SER
264
A
LEU
265
n
72
LEU
265
A
GLN
266
n
73
GLN
266
A
LEU
267
n
74
LEU
267
A
ASP
268
n
75
ASP
268
A
PRO
269
n
76
PRO
269
A
ALA
270
n
77
ALA
270
A
GLN
271
n
78
GLN
271
A
ILE
272
n
79
ILE
272
A
TYR
273
n
80
TYR
273
A
ARG
274
n
81
ARG
274
A
VAL
275
n
82
VAL
275
A
THR
276
n
83
THR
276
A
TRP
277
n
84
TRP
277
A
PHE
278
n
85
PHE
278
A
ILE
279
n
86
ILE
279
A
SER
280
n
87
SER
280
A
TRP
281
n
88
TRP
281
A
SER
282
n
89
SER
282
A
PRO
283
n
90
PRO
283
A
CYS
284
n
91
CYS
284
A
PHE
285
n
92
PHE
285
A
SER
286
n
93
SER
286
A
TRP
287
n
94
TRP
287
A
GLY
288
n
95
GLY
288
A
CYS
289
n
96
CYS
289
A
ALA
290
n
97
ALA
290
A
GLY
291
n
98
GLY
291
A
GLU
292
n
99
GLU
292
A
VAL
293
n
100
VAL
293
A
ARG
294
n
101
ARG
294
A
ALA
295
n
102
ALA
295
A
PHE
296
n
103
PHE
296
A
LEU
297
n
104
LEU
297
A
GLN
298
n
105
GLN
298
A
GLU
299
n
106
GLU
299
A
ASN
300
n
107
ASN
300
A
THR
301
n
108
THR
301
A
HIS
302
n
109
HIS
302
A
VAL
303
n
110
VAL
303
A
ARG
304
n
111
ARG
304
A
LEU
305
n
112
LEU
305
A
ARG
306
n
113
ARG
306
A
ILE
307
n
114
ILE
307
A
LYS
308
n
115
LYS
308
A
ALA
309
n
116
ALA
309
A
ALA
310
n
117
ALA
310
A
ARG
311
n
118
ARG
311
A
ILE
312
n
119
ILE
312
A
TYR
313
n
120
TYR
313
A
ASP
314
n
121
ASP
314
A
TYR
315
n
122
TYR
315
A
ASP
316
n
123
ASP
316
A
PRO
317
n
124
PRO
317
A
LEU
318
n
125
LEU
318
A
TYR
319
n
126
TYR
319
A
LYS
320
n
127
LYS
320
A
GLU
321
n
128
GLU
321
A
ALA
322
n
129
ALA
322
A
LEU
323
n
130
LEU
323
A
GLN
324
n
131
GLN
324
A
MET
325
n
132
MET
325
A
LEU
326
n
133
LEU
326
A
ARG
327
n
134
ARG
327
A
ASP
328
n
135
ASP
328
A
ALA
329
n
136
ALA
329
A
GLY
330
n
137
GLY
330
A
ALA
331
n
138
ALA
331
A
GLN
332
n
139
GLN
332
A
VAL
333
n
140
VAL
333
A
SER
334
n
141
SER
334
A
ILE
335
n
142
ILE
335
A
MET
336
n
143
MET
336
A
THR
337
n
144
THR
337
A
TYR
338
n
145
TYR
338
A
ASP
339
n
146
ASP
339
A
GLU
340
n
147
GLU
340
A
PHE
341
n
148
PHE
341
A
GLU
342
n
149
GLU
342
A
TYR
343
n
150
TYR
343
A
CYS
344
n
151
CYS
344
A
TRP
345
n
152
TRP
345
A
ASP
346
n
153
ASP
346
A
THR
347
n
154
THR
347
A
PHE
348
n
155
PHE
348
A
VAL
349
n
156
VAL
349
A
TYR
350
n
157
TYR
350
A
ARG
351
n
158
ARG
351
A
GLN
352
n
159
GLN
352
A
GLY
353
n
160
GLY
353
A
CYS
354
n
161
CYS
354
A
PRO
355
n
162
PRO
355
A
PHE
356
n
163
PHE
356
A
GLN
357
n
164
GLN
357
A
PRO
358
n
165
PRO
358
A
TRP
359
n
166
TRP
359
A
ASP
360
n
167
ASP
360
A
GLY
361
n
168
GLY
361
A
LEU
362
n
169
LEU
362
A
GLU
363
n
170
GLU
363
A
GLU
364
n
171
GLU
364
A
HIS
365
n
172
HIS
365
A
SER
366
n
173
SER
366
A
GLN
367
n
174
GLN
367
A
ALA
368
n
175
ALA
368
A
LEU
369
n
176
LEU
369
A
SER
370
n
177
SER
370
A
GLY
371
n
178
GLY
371
A
ARG
372
n
179
ARG
372
A
LEU
373
n
180
LEU
373
A
ARG
374
n
181
ARG
374
A
ALA
375
n
182
ALA
375
A
ILE
376
n
183
ILE
376
A
LEU
377
n
184
LEU
377
A
GLN
378
n
185
GLN
378
A
LEU
379
n
186
LEU
379
A
6.9200
2.1456
-1.4288
5.8884
-2.5237
6.0428
-0.0060
0.4256
0.0791
-0.3117
0.1543
-0.2504
0.1061
0.0803
-0.0753
0.1033
0.0250
0.0046
0.1739
-0.0270
0.0932
refined
-0.6908
-11.9846
-4.1927
X-RAY DIFFRACTION
2.1178
0.2958
-0.0800
2.5190
-0.1907
1.9461
0.0602
-0.0475
-0.0769
-0.0283
-0.0649
-0.0299
-0.0207
0.0372
-0.0169
0.0951
0.0161
-0.0023
0.1157
-0.0067
0.0593
refined
-5.6082
-10.6088
4.6285
X-RAY DIFFRACTION
5.4260
-4.8021
2.3781
6.2463
-1.5943
2.5519
0.0015
0.2150
0.3324
-0.3552
-0.1196
0.2546
-0.2948
-0.2468
0.0589
0.2142
0.0378
-0.0148
0.1950
0.0313
0.1854
refined
-10.9968
1.9111
-2.8619
X-RAY DIFFRACTION
1.0196
0.1634
0.0812
1.3306
0.1888
1.9046
0.0150
-0.0369
0.1092
0.0961
-0.0236
0.0022
-0.1431
-0.0236
0.0183
0.0839
0.0050
0.0014
0.1142
0.0006
0.1050
refined
-8.5535
-4.9282
9.8818
X-RAY DIFFRACTION
2.0261
1.2827
-0.8512
1.9023
-1.1335
4.6096
-0.0429
0.1694
-0.2541
-0.1297
0.0350
-0.0394
0.3527
-0.1637
-0.0053
0.0627
0.0067
-0.0487
0.1191
-0.0140
0.1111
refined
-12.1216
-19.1868
2.4583
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 189 through 202 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 203 through 224 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 225 through 239 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 240 through 348 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 349 through 379 )
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
253
A
ND1
HIS
60
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
284
A
SG
CYS
91
1_555
114.4
A
HIS
253
A
ND1
HIS
60
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
289
A
SG
CYS
96
1_555
113.0
A
CYS
284
A
SG
CYS
91
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
289
A
SG
CYS
96
1_555
114.0
A
HIS
253
A
ND1
HIS
60
1_555
A
ZN
401
B
ZN
ZN
1_555
A
EDO
405
F
O2
EDO
1_555
100.7
A
CYS
284
A
SG
CYS
91
1_555
A
ZN
401
B
ZN
ZN
1_555
A
EDO
405
F
O2
EDO
1_555
107.1
A
CYS
289
A
SG
CYS
96
1_555
A
ZN
401
B
ZN
ZN
1_555
A
EDO
405
F
O2
EDO
1_555
106.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
227
A
O
THR
42
A
N
ASP
224
A
N
ASP
39
A
N
TYR
218
A
N
TYR
33
A
O
GLY
236
A
O
GLY
51
A
O
THR
227
A
O
THR
42
A
N
ASP
224
A
N
ASP
39
A
N
GLU
219
A
N
GLU
34
A
O
THR
276
A
O
THR
83
A
N
TRP
277
A
N
TRP
84
A
O
LYS
308
A
O
LYS
115
A
N
ILE
307
A
N
ILE
114
A
O
GLN
332
A
O
GLN
139
1
A
CG
LEU
189
A
CG
LEU
4
1
Y
1
A
CD1
LEU
189
A
CD1
LEU
4
1
Y
1
A
CD2
LEU
189
A
CD2
LEU
4
1
Y
1
A
MET
186
A
MET
1
1
Y
1
A
GLU
187
A
GLU
2
1
Y
1
A
ILE
188
A
ILE
3
1
Y
1
A
A
O
O
HOH
HOH
533
589
1.98
1
A
A
OD2
O
ASP
HOH
232
501
2.11
1
A
A
O
O
HOH
HOH
556
668
2.12
1
A
A
O
O
HOH
HOH
589
662
2.16
1
-3.17
0.50
120.30
117.13
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
190
190
190
N
1
A
A
O
O
HOH
HOH
621
658
2.09
1_555
3_545
1
A
ARG
210
-151.86
31.40
1
A
ASN
225
39.90
72.06
0.1859
0.1523
0.1541
1.730
40.7
998
19544
5.11
99.78
0.19
Random selection
1
FREE R-VALUE
1.35
18.17
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
1.730
40.7
185
1739
38
0
1516
0.018
1614
1.652
2189
17.201
948
0.100
225
0.010
285
0.2940
0.2306
1.8213
137
2615
100.00
0.2268
0.1781
1.9354
148
2581
100.00
0.1998
0.1584
2.0848
121
2655
100.00
0.1901
0.1444
2.2946
160
2603
100.00
0.1815
0.1440
2.6266
166
2625
100.00
0.1777
0.1494
3.3090
126
2686
100.00
0.1614
0.1407
40.7383
140
2781
99.00
1.73
40.7
5CQH
19558
1
17.3
4.7
100
refinement
PHENIX
(dev_2067: ???)
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
PHASER
Crystal Structure of the Cancer Genomic DNA Mutator APOBEC3B
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
A
ASP
194
A
ASP
9
HELX_P
A
ASN
203
A
ASN
18
1
AA1
10
A
ASP
232
A
ASP
47
HELX_P
A
MET
235
A
MET
50
5
AA2
4
A
HIS
253
A
HIS
60
HELX_P
A
GLN
266
A
GLN
73
1
AA3
14
A
GLY
288
A
GLY
95
HELX_P
A
ASN
300
A
ASN
107
1
AA4
13
A
LEU
318
A
LEU
125
HELX_P
A
ALA
329
A
ALA
136
1
AA5
12
A
THR
337
A
THR
144
HELX_P
A
VAL
349
A
VAL
156
1
AA6
13
A
GLY
361
A
GLY
168
HELX_P
A
GLN
378
A
GLN
185
1
AA7
18
metalc
2.001
A
HIS
253
A
ND1
HIS
60
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.295
A
CYS
284
A
SG
CYS
91
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.267
A
CYS
289
A
SG
CYS
96
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.067
A
ZN
401
B
ZN
ZN
1_555
A
EDO
405
F
O2
EDO
1_555
HYDROLASE
APOBEC, deaminase, HYDROLASE
ABC3B_HUMAN
UNP
1
187
Q9UH17
EILRYLMDPDTFTFNFNNDPLVLRRRQTYLCYEVERLDNGTWVLMDQHMGFLCNEAKNLLCGFYGRHAELRFLDLVPSLQ
LDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWD
TFVYRQGCPFQPWDGLEEHSQALSGRLRAILQ
187
378
5CQH
187
378
Q9UH17
A
1
2
185
1
initiating methionine
MET
186
5CQH
A
Q9UH17
UNP
1
1
PHE
conflict
SER
200
5CQH
A
Q9UH17
UNP
200
15
1
TRP
conflict
SER
228
5CQH
A
Q9UH17
UNP
228
43
1
LEU
conflict
LYS
230
5CQH
A
Q9UH17
UNP
230
45
1
ALA
deletion
5CQH
A
Q9UH17
UNP
242
1
LYS
deletion
5CQH
A
Q9UH17
UNP
243
1
ASN
deletion
5CQH
A
Q9UH17
UNP
244
1
LEU
deletion
5CQH
A
Q9UH17
UNP
245
1
LEU
deletion
5CQH
A
Q9UH17
UNP
246
1
CYS
deletion
5CQH
A
Q9UH17
UNP
247
1
GLY
deletion
5CQH
A
Q9UH17
UNP
248
1
PHE
deletion
5CQH
A
Q9UH17
UNP
249
1
TYR
conflict
SER
250
5CQH
A
Q9UH17
UNP
250
57
1
PHE
conflict
LYS
308
5CQH
A
Q9UH17
UNP
308
115
1
expression tag
LEU
379
5CQH
A
Q9UH17
UNP
186
3
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
A
THR
227
A
THR
42
A
LYS
230
A
LYS
45
A
TYR
215
A
TYR
30
A
ASP
224
A
ASP
39
A
GLY
236
A
GLY
51
A
CYS
239
A
CYS
54
A
THR
227
A
THR
42
A
LYS
230
A
LYS
45
A
TYR
215
A
TYR
30
A
ASP
224
A
ASP
39
A
ILE
272
A
ILE
79
A
ILE
279
A
ILE
86
A
VAL
303
A
VAL
110
A
ALA
309
A
ALA
116
A
GLN
332
A
GLN
139
A
ILE
335
A
ILE
142
binding site for residue ZN A 401
A
ZN
401
Software
4
binding site for residue DC A 402
A
DC
402
Software
13
binding site for residue CL A 403
A
CL
403
Software
3
binding site for residue EDO A 404
A
EDO
404
Software
6
binding site for residue EDO A 405
A
EDO
405
Software
7
binding site for residue EDO A 406
A
EDO
406
Software
6
binding site for residue EDO A 407
A
EDO
407
Software
6
A
HIS
253
A
HIS
60
4
1_555
A
CYS
284
A
CYS
91
4
1_555
A
CYS
289
A
CYS
96
4
1_555
A
EDO
405
F
EDO
4
1_555
A
ARG
252
A
ARG
59
13
3_545
A
ASP
260
A
ASP
67
13
3_545
A
ASP
314
A
ASP
121
13
1_555
A
TYR
319
A
TYR
126
13
1_555
A
LYS
320
A
LYS
127
13
1_555
A
ARG
372
A
ARG
179
13
1_555
A
HOH
504
I
HOH
13
1_555
A
HOH
549
I
HOH
13
1_555
A
HOH
554
I
HOH
13
1_555
A
HOH
559
I
HOH
13
1_555
A
HOH
598
I
HOH
13
1_555
A
HOH
616
I
HOH
13
1_555
A
HOH
620
I
HOH
13
1_555
A
ILE
335
A
ILE
142
3
1_555
A
SER
370
A
SER
177
3
1_555
A
ARG
374
A
ARG
181
3
1_555
A
PRO
206
A
PRO
21
6
3_555
A
ARG
252
A
ARG
59
6
1_555
A
TRP
287
A
TRP
94
6
1_555
A
GLU
292
A
GLU
99
6
1_555
A
HOH
510
I
HOH
6
1_555
A
HOH
580
I
HOH
6
1_555
A
THR
214
A
THR
29
7
1_555
A
HIS
253
A
HIS
60
7
1_555
A
GLU
255
A
GLU
62
7
1_555
A
SER
282
A
SER
89
7
1_555
A
CYS
284
A
CYS
91
7
1_555
A
CYS
289
A
CYS
96
7
1_555
A
ZN
401
B
ZN
7
1_555
A
CYS
239
A
CYS
54
6
1_555
A
THR
337
A
THR
144
6
4_545
A
TYR
338
A
TYR
145
6
4_545
A
ASP
339
A
ASP
146
6
4_545
A
HOH
560
I
HOH
6
1_555
A
HOH
562
I
HOH
6
1_555
A
ASP
339
A
ASP
146
6
1_555
A
GLU
340
A
GLU
147
6
1_555
A
TYR
343
A
TYR
150
6
1_555
A
HOH
516
I
HOH
6
1_555
A
HOH
622
I
HOH
6
1_555
A
HOH
640
I
HOH
6
1_555
19
P 21 21 21