0.010301
0.005947
0.000000
0.000000
0.011894
0.000000
0.000000
0.000000
0.012394
0.00000
0.00000
0.00000
Murray, J.M.
Wallweber, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90
90
120
97.0790
97.0790
80.6870
C22 H23 N7
385.465
(1S,3S)-N-{6-[5-(pyridin-3-yl)-1H-pyrazolo[3,4-c]pyridin-3-yl]pyridin-2-yl}cyclohexane-1,3-diamine
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
Y
2
N
C
N
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
N
Y
8
N
C
N
9
N
N
N
10
S
C
N
11
N
C
N
12
S
C
N
13
N
C
N
14
N
N
Y
15
N
C
Y
16
N
C
Y
17
N
C
Y
18
N
C
Y
19
N
N
Y
20
N
C
Y
21
N
C
Y
22
N
N
Y
23
N
N
Y
24
N
C
Y
25
N
C
Y
26
N
C
Y
27
N
C
Y
28
N
N
Y
29
N
C
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
N
N
54
S
C
N
55
N
C
N
56
N
O
N
57
N
C
N
58
N
O
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
C
N
72
N
C
N
73
N
N
N
74
N
C
N
75
N
N
N
76
N
N
N
77
N
O
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
N
N
94
S
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
C
N
99
N
O
N
100
N
N
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
S
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
N
N
127
R
C
N
128
N
C
N
129
N
O
N
130
N
C
N
131
N
S
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
N
N
141
S
C
N
142
N
C
N
143
N
O
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
N
N
149
N
O
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
O
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
N
C
Y
194
N
C
Y
195
N
N
Y
196
N
C
Y
197
N
C
Y
198
N
N
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
S
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
N
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
N
N
283
S
C
N
284
N
C
N
285
N
O
N
286
N
C
N
287
N
C
N
288
N
S
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
C
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
N
N
357
S
C
N
358
N
C
N
359
N
O
N
360
R
C
N
361
N
O
N
362
N
C
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
N
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
N
411
N
O
N
412
N
O
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
N
N
425
S
C
N
426
N
C
N
427
N
O
N
428
N
C
N
429
N
C
N
430
N
C
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
Y
1
N
doub
Y
2
N
sing
Y
3
N
sing
Y
4
N
sing
Y
5
N
sing
Y
6
N
doub
Y
7
N
doub
Y
8
N
sing
Y
9
N
doub
N
10
N
sing
Y
11
N
doub
Y
12
N
sing
Y
13
N
sing
Y
14
N
sing
Y
15
N
doub
N
16
N
sing
Y
17
N
doub
Y
18
N
sing
Y
19
N
doub
Y
20
N
sing
Y
21
N
sing
Y
22
N
doub
Y
23
N
doub
Y
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
Y
196
N
sing
Y
197
N
doub
Y
198
N
doub
N
199
N
sing
Y
200
N
sing
N
201
N
sing
Y
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
doub
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
1464-3405
25
5258
5264
10.1016/j.bmcl.2015.09.052
26459208
Discovery of 3,5-substituted 6-azaindazoles as potent pan-Pim inhibitors.
2015
10.2210/pdb5dia/pdb
pdb_00005dia
100
1
CCD
2010-12-16
ADSC QUANTUM 315
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
BL7-1
SSRL
0.9795
SYNCHROTRON
SSRL BEAMLINE BL7-1
34447.141
Serine/threonine-protein kinase pim-1
2.7.11.1
kinase domain (UNP residues 120-404)
1
man
polymer
385.465
(1S,3S)-N-{6-[5-(pyridin-3-yl)-1H-pyrazolo[3,4-c]pyridin-3-yl]pyridin-2-yl}cyclohexane-1,3-diamine
1
syn
non-polymer
18.015
water
219
nat
water
no
no
MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL
DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF
GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLI
RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSKKLAAALEHHHHHH
MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL
DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF
GSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLI
RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSKKLAAALEHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
299
PIM1
9606
Homo sapiens
511693
Escherichia coli
BL21
plasmid
Biological sequence
1
3.19
61.40
VAPOR DIFFUSION, HANGING DROP
8.5
PEG 4000, 0.2M LiSO4, 0.1M Tris-HCl
289
chem_comp_atom
chem_comp_bond
citation
database_2
pdbx_struct_oper_list
repository
Initial release
Database references
Data collection
Database references
Derived calculations
1
0
2015-10-28
1
1
2015-11-11
1
2
2024-03-06
_citation.journal_id_CSD
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_oper_list.symmetry_operation
N
RCSB
Y
RCSB
2015-08-31
REL
REL
1
A
O
HOH
719
6.13
5E6
(1S,3S)-N-{6-[5-(pyridin-3-yl)-1H-pyrazolo[3,4-c]pyridin-3-yl]pyridin-2-yl}cyclohexane-1,3-diamine
HOH
water
ZZZ
1
2
5E6
5E6
401
A
HOH
42
3
HOH
HOH
501
A
HOH
167
3
HOH
HOH
502
A
HOH
70
3
HOH
HOH
503
A
HOH
174
3
HOH
HOH
504
A
HOH
151
3
HOH
HOH
505
A
HOH
194
3
HOH
HOH
506
A
HOH
139
3
HOH
HOH
507
A
HOH
110
3
HOH
HOH
508
A
HOH
216
3
HOH
HOH
509
A
HOH
146
3
HOH
HOH
510
A
HOH
195
3
HOH
HOH
511
A
HOH
35
3
HOH
HOH
512
A
HOH
154
3
HOH
HOH
513
A
HOH
78
3
HOH
HOH
514
A
HOH
143
3
HOH
HOH
515
A
HOH
73
3
HOH
HOH
516
A
HOH
60
3
HOH
HOH
517
A
HOH
56
3
HOH
HOH
518
A
HOH
53
3
HOH
HOH
519
A
HOH
44
3
HOH
HOH
520
A
HOH
142
3
HOH
HOH
521
A
HOH
48
3
HOH
HOH
522
A
HOH
192
3
HOH
HOH
523
A
HOH
5
3
HOH
HOH
524
A
HOH
116
3
HOH
HOH
525
A
HOH
126
3
HOH
HOH
526
A
HOH
52
3
HOH
HOH
527
A
HOH
140
3
HOH
HOH
528
A
HOH
63
3
HOH
HOH
529
A
HOH
138
3
HOH
HOH
530
A
HOH
45
3
HOH
HOH
531
A
HOH
54
3
HOH
HOH
532
A
HOH
65
3
HOH
HOH
533
A
HOH
33
3
HOH
HOH
534
A
HOH
152
3
HOH
HOH
535
A
HOH
25
3
HOH
HOH
536
A
HOH
36
3
HOH
HOH
537
A
HOH
40
3
HOH
HOH
538
A
HOH
57
3
HOH
HOH
539
A
HOH
50
3
HOH
HOH
540
A
HOH
37
3
HOH
HOH
541
A
HOH
207
3
HOH
HOH
542
A
HOH
22
3
HOH
HOH
543
A
HOH
62
3
HOH
HOH
544
A
HOH
66
3
HOH
HOH
545
A
HOH
29
3
HOH
HOH
546
A
HOH
137
3
HOH
HOH
547
A
HOH
106
3
HOH
HOH
548
A
HOH
94
3
HOH
HOH
549
A
HOH
155
3
HOH
HOH
550
A
HOH
8
3
HOH
HOH
551
A
HOH
14
3
HOH
HOH
552
A
HOH
20
3
HOH
HOH
553
A
HOH
55
3
HOH
HOH
554
A
HOH
86
3
HOH
HOH
555
A
HOH
157
3
HOH
HOH
556
A
HOH
135
3
HOH
HOH
557
A
HOH
121
3
HOH
HOH
558
A
HOH
2
3
HOH
HOH
559
A
HOH
93
3
HOH
HOH
560
A
HOH
211
3
HOH
HOH
561
A
HOH
59
3
HOH
HOH
562
A
HOH
19
3
HOH
HOH
563
A
HOH
202
3
HOH
HOH
564
A
HOH
16
3
HOH
HOH
565
A
HOH
218
3
HOH
HOH
566
A
HOH
17
3
HOH
HOH
567
A
HOH
58
3
HOH
HOH
568
A
HOH
4
3
HOH
HOH
569
A
HOH
133
3
HOH
HOH
570
A
HOH
26
3
HOH
HOH
571
A
HOH
134
3
HOH
HOH
572
A
HOH
148
3
HOH
HOH
573
A
HOH
32
3
HOH
HOH
574
A
HOH
84
3
HOH
HOH
575
A
HOH
95
3
HOH
HOH
576
A
HOH
6
3
HOH
HOH
577
A
HOH
18
3
HOH
HOH
578
A
HOH
147
3
HOH
HOH
579
A
HOH
162
3
HOH
HOH
580
A
HOH
136
3
HOH
HOH
581
A
HOH
87
3
HOH
HOH
582
A
HOH
11
3
HOH
HOH
583
A
HOH
173
3
HOH
HOH
584
A
HOH
77
3
HOH
HOH
585
A
HOH
83
3
HOH
HOH
586
A
HOH
10
3
HOH
HOH
587
A
HOH
27
3
HOH
HOH
588
A
HOH
196
3
HOH
HOH
589
A
HOH
3
3
HOH
HOH
590
A
HOH
171
3
HOH
HOH
591
A
HOH
1
3
HOH
HOH
592
A
HOH
23
3
HOH
HOH
593
A
HOH
9
3
HOH
HOH
594
A
HOH
130
3
HOH
HOH
595
A
HOH
7
3
HOH
HOH
596
A
HOH
156
3
HOH
HOH
597
A
HOH
125
3
HOH
HOH
598
A
HOH
61
3
HOH
HOH
599
A
HOH
31
3
HOH
HOH
600
A
HOH
205
3
HOH
HOH
601
A
HOH
180
3
HOH
HOH
602
A
HOH
28
3
HOH
HOH
603
A
HOH
117
3
HOH
HOH
604
A
HOH
81
3
HOH
HOH
605
A
HOH
21
3
HOH
HOH
606
A
HOH
74
3
HOH
HOH
607
A
HOH
182
3
HOH
HOH
608
A
HOH
97
3
HOH
HOH
609
A
HOH
30
3
HOH
HOH
610
A
HOH
127
3
HOH
HOH
611
A
HOH
115
3
HOH
HOH
612
A
HOH
96
3
HOH
HOH
613
A
HOH
170
3
HOH
HOH
614
A
HOH
178
3
HOH
HOH
615
A
HOH
46
3
HOH
HOH
616
A
HOH
41
3
HOH
HOH
617
A
HOH
120
3
HOH
HOH
618
A
HOH
132
3
HOH
HOH
619
A
HOH
99
3
HOH
HOH
620
A
HOH
69
3
HOH
HOH
621
A
HOH
158
3
HOH
HOH
622
A
HOH
24
3
HOH
HOH
623
A
HOH
12
3
HOH
HOH
624
A
HOH
185
3
HOH
HOH
625
A
HOH
91
3
HOH
HOH
626
A
HOH
113
3
HOH
HOH
627
A
HOH
67
3
HOH
HOH
628
A
HOH
75
3
HOH
HOH
629
A
HOH
123
3
HOH
HOH
630
A
HOH
85
3
HOH
HOH
631
A
HOH
163
3
HOH
HOH
632
A
HOH
105
3
HOH
HOH
633
A
HOH
39
3
HOH
HOH
634
A
HOH
13
3
HOH
HOH
635
A
HOH
82
3
HOH
HOH
636
A
HOH
150
3
HOH
HOH
637
A
HOH
80
3
HOH
HOH
638
A
HOH
68
3
HOH
HOH
639
A
HOH
186
3
HOH
HOH
640
A
HOH
141
3
HOH
HOH
641
A
HOH
144
3
HOH
HOH
642
A
HOH
112
3
HOH
HOH
643
A
HOH
102
3
HOH
HOH
644
A
HOH
199
3
HOH
HOH
645
A
HOH
76
3
HOH
HOH
646
A
HOH
190
3
HOH
HOH
647
A
HOH
98
3
HOH
HOH
648
A
HOH
51
3
HOH
HOH
649
A
HOH
88
3
HOH
HOH
650
A
HOH
64
3
HOH
HOH
651
A
HOH
188
3
HOH
HOH
652
A
HOH
197
3
HOH
HOH
653
A
HOH
103
3
HOH
HOH
654
A
HOH
34
3
HOH
HOH
655
A
HOH
200
3
HOH
HOH
656
A
HOH
204
3
HOH
HOH
657
A
HOH
72
3
HOH
HOH
658
A
HOH
71
3
HOH
HOH
659
A
HOH
124
3
HOH
HOH
660
A
HOH
131
3
HOH
HOH
661
A
HOH
47
3
HOH
HOH
662
A
HOH
161
3
HOH
HOH
663
A
HOH
49
3
HOH
HOH
664
A
HOH
114
3
HOH
HOH
665
A
HOH
90
3
HOH
HOH
666
A
HOH
219
3
HOH
HOH
667
A
HOH
214
3
HOH
HOH
668
A
HOH
184
3
HOH
HOH
669
A
HOH
208
3
HOH
HOH
670
A
HOH
183
3
HOH
HOH
671
A
HOH
145
3
HOH
HOH
672
A
HOH
15
3
HOH
HOH
673
A
HOH
189
3
HOH
HOH
674
A
HOH
128
3
HOH
HOH
675
A
HOH
209
3
HOH
HOH
676
A
HOH
149
3
HOH
HOH
677
A
HOH
129
3
HOH
HOH
678
A
HOH
79
3
HOH
HOH
679
A
HOH
159
3
HOH
HOH
680
A
HOH
175
3
HOH
HOH
681
A
HOH
104
3
HOH
HOH
682
A
HOH
160
3
HOH
HOH
683
A
HOH
179
3
HOH
HOH
684
A
HOH
119
3
HOH
HOH
685
A
HOH
169
3
HOH
HOH
686
A
HOH
164
3
HOH
HOH
687
A
HOH
108
3
HOH
HOH
688
A
HOH
100
3
HOH
HOH
689
A
HOH
43
3
HOH
HOH
690
A
HOH
177
3
HOH
HOH
691
A
HOH
109
3
HOH
HOH
692
A
HOH
92
3
HOH
HOH
693
A
HOH
201
3
HOH
HOH
694
A
HOH
122
3
HOH
HOH
695
A
HOH
191
3
HOH
HOH
696
A
HOH
165
3
HOH
HOH
697
A
HOH
111
3
HOH
HOH
698
A
HOH
101
3
HOH
HOH
699
A
HOH
176
3
HOH
HOH
700
A
HOH
172
3
HOH
HOH
701
A
HOH
89
3
HOH
HOH
702
A
HOH
217
3
HOH
HOH
703
A
HOH
118
3
HOH
HOH
704
A
HOH
107
3
HOH
HOH
705
A
HOH
153
3
HOH
HOH
706
A
HOH
203
3
HOH
HOH
707
A
HOH
210
3
HOH
HOH
708
A
HOH
187
3
HOH
HOH
709
A
HOH
206
3
HOH
HOH
710
A
HOH
181
3
HOH
HOH
711
A
HOH
212
3
HOH
HOH
712
A
HOH
166
3
HOH
HOH
713
A
HOH
215
3
HOH
HOH
714
A
HOH
198
3
HOH
HOH
715
A
HOH
38
3
HOH
HOH
716
A
HOH
168
3
HOH
HOH
717
A
HOH
193
3
HOH
HOH
718
A
HOH
213
3
HOH
HOH
719
A
n
1
28
A
n
2
29
A
n
3
30
A
n
4
31
A
n
5
32
A
PRO
33
n
6
PRO
33
A
LEU
34
n
7
LEU
34
A
GLU
35
n
8
GLU
35
A
SER
36
n
9
SER
36
A
GLN
37
n
10
GLN
37
A
TYR
38
n
11
TYR
38
A
GLN
39
n
12
GLN
39
A
VAL
40
n
13
VAL
40
A
GLY
41
n
14
GLY
41
A
PRO
42
n
15
PRO
42
A
LEU
43
n
16
LEU
43
A
LEU
44
n
17
LEU
44
A
GLY
45
n
18
GLY
45
A
SER
46
n
19
SER
46
A
GLY
47
n
20
GLY
47
A
GLY
48
n
21
GLY
48
A
PHE
49
n
22
PHE
49
A
GLY
50
n
23
GLY
50
A
SER
51
n
24
SER
51
A
VAL
52
n
25
VAL
52
A
TYR
53
n
26
TYR
53
A
SER
54
n
27
SER
54
A
GLY
55
n
28
GLY
55
A
ILE
56
n
29
ILE
56
A
ARG
57
n
30
ARG
57
A
VAL
58
n
31
VAL
58
A
SER
59
n
32
SER
59
A
ASP
60
n
33
ASP
60
A
ASN
61
n
34
ASN
61
A
LEU
62
n
35
LEU
62
A
PRO
63
n
36
PRO
63
A
VAL
64
n
37
VAL
64
A
ALA
65
n
38
ALA
65
A
ILE
66
n
39
ILE
66
A
LYS
67
n
40
LYS
67
A
HIS
68
n
41
HIS
68
A
VAL
69
n
42
VAL
69
A
GLU
70
n
43
GLU
70
A
LYS
71
n
44
LYS
71
A
ASP
72
n
45
ASP
72
A
ARG
73
n
46
ARG
73
A
ILE
74
n
47
ILE
74
A
SER
75
n
48
SER
75
A
ASP
76
n
49
ASP
76
A
TRP
77
n
50
TRP
77
A
GLY
78
n
51
GLY
78
A
GLU
79
n
52
GLU
79
A
LEU
80
n
53
LEU
80
A
PRO
81
n
54
PRO
81
A
ASN
82
n
55
ASN
82
A
GLY
83
n
56
GLY
83
A
THR
84
n
57
THR
84
A
ARG
85
n
58
ARG
85
A
VAL
86
n
59
VAL
86
A
PRO
87
n
60
PRO
87
A
MET
88
n
61
MET
88
A
GLU
89
n
62
GLU
89
A
VAL
90
n
63
VAL
90
A
VAL
91
n
64
VAL
91
A
LEU
92
n
65
LEU
92
A
LEU
93
n
66
LEU
93
A
LYS
94
n
67
LYS
94
A
LYS
95
n
68
LYS
95
A
VAL
96
n
69
VAL
96
A
SER
97
n
70
SER
97
A
SER
98
n
71
SER
98
A
GLY
99
n
72
GLY
99
A
PHE
100
n
73
PHE
100
A
SER
101
n
74
SER
101
A
GLY
102
n
75
GLY
102
A
VAL
103
n
76
VAL
103
A
ILE
104
n
77
ILE
104
A
ARG
105
n
78
ARG
105
A
LEU
106
n
79
LEU
106
A
LEU
107
n
80
LEU
107
A
ASP
108
n
81
ASP
108
A
TRP
109
n
82
TRP
109
A
PHE
110
n
83
PHE
110
A
GLU
111
n
84
GLU
111
A
ARG
112
n
85
ARG
112
A
PRO
113
n
86
PRO
113
A
ASP
114
n
87
ASP
114
A
SER
115
n
88
SER
115
A
PHE
116
n
89
PHE
116
A
VAL
117
n
90
VAL
117
A
LEU
118
n
91
LEU
118
A
ILE
119
n
92
ILE
119
A
LEU
120
n
93
LEU
120
A
GLU
121
n
94
GLU
121
A
ARG
122
n
95
ARG
122
A
PRO
123
n
96
PRO
123
A
GLU
124
n
97
GLU
124
A
PRO
125
n
98
PRO
125
A
VAL
126
n
99
VAL
126
A
GLN
127
n
100
GLN
127
A
ASP
128
n
101
ASP
128
A
LEU
129
n
102
LEU
129
A
PHE
130
n
103
PHE
130
A
ASP
131
n
104
ASP
131
A
PHE
132
n
105
PHE
132
A
ILE
133
n
106
ILE
133
A
THR
134
n
107
THR
134
A
GLU
135
n
108
GLU
135
A
ARG
136
n
109
ARG
136
A
GLY
137
n
110
GLY
137
A
ALA
138
n
111
ALA
138
A
LEU
139
n
112
LEU
139
A
GLN
140
n
113
GLN
140
A
GLU
141
n
114
GLU
141
A
GLU
142
n
115
GLU
142
A
LEU
143
n
116
LEU
143
A
ALA
144
n
117
ALA
144
A
ARG
145
n
118
ARG
145
A
SER
146
n
119
SER
146
A
PHE
147
n
120
PHE
147
A
PHE
148
n
121
PHE
148
A
TRP
149
n
122
TRP
149
A
GLN
150
n
123
GLN
150
A
VAL
151
n
124
VAL
151
A
LEU
152
n
125
LEU
152
A
GLU
153
n
126
GLU
153
A
ALA
154
n
127
ALA
154
A
VAL
155
n
128
VAL
155
A
ARG
156
n
129
ARG
156
A
HIS
157
n
130
HIS
157
A
CYS
158
n
131
CYS
158
A
HIS
159
n
132
HIS
159
A
ASN
160
n
133
ASN
160
A
CYS
161
n
134
CYS
161
A
GLY
162
n
135
GLY
162
A
VAL
163
n
136
VAL
163
A
LEU
164
n
137
LEU
164
A
HIS
165
n
138
HIS
165
A
ARG
166
n
139
ARG
166
A
ASP
167
n
140
ASP
167
A
ILE
168
n
141
ILE
168
A
LYS
169
n
142
LYS
169
A
ASP
170
n
143
ASP
170
A
GLU
171
n
144
GLU
171
A
ASN
172
n
145
ASN
172
A
ILE
173
n
146
ILE
173
A
LEU
174
n
147
LEU
174
A
ILE
175
n
148
ILE
175
A
ASP
176
n
149
ASP
176
A
LEU
177
n
150
LEU
177
A
ASN
178
n
151
ASN
178
A
ARG
179
n
152
ARG
179
A
GLY
180
n
153
GLY
180
A
GLU
181
n
154
GLU
181
A
LEU
182
n
155
LEU
182
A
LYS
183
n
156
LYS
183
A
LEU
184
n
157
LEU
184
A
ILE
185
n
158
ILE
185
A
ASP
186
n
159
ASP
186
A
PHE
187
n
160
PHE
187
A
GLY
188
n
161
GLY
188
A
SER
189
n
162
SER
189
A
GLY
190
n
163
GLY
190
A
ALA
191
n
164
ALA
191
A
LEU
192
n
165
LEU
192
A
LEU
193
n
166
LEU
193
A
LYS
194
n
167
LYS
194
A
ASP
195
n
168
ASP
195
A
THR
196
n
169
THR
196
A
VAL
197
n
170
VAL
197
A
TYR
198
n
171
TYR
198
A
THR
199
n
172
THR
199
A
ASP
200
n
173
ASP
200
A
PHE
201
n
174
PHE
201
A
ASP
202
n
175
ASP
202
A
GLY
203
n
176
GLY
203
A
THR
204
n
177
THR
204
A
ARG
205
n
178
ARG
205
A
VAL
206
n
179
VAL
206
A
TYR
207
n
180
TYR
207
A
SER
208
n
181
SER
208
A
PRO
209
n
182
PRO
209
A
PRO
210
n
183
PRO
210
A
GLU
211
n
184
GLU
211
A
TRP
212
n
185
TRP
212
A
ILE
213
n
186
ILE
213
A
ARG
214
n
187
ARG
214
A
TYR
215
n
188
TYR
215
A
HIS
216
n
189
HIS
216
A
ARG
217
n
190
ARG
217
A
TYR
218
n
191
TYR
218
A
HIS
219
n
192
HIS
219
A
GLY
220
n
193
GLY
220
A
ARG
221
n
194
ARG
221
A
SER
222
n
195
SER
222
A
ALA
223
n
196
ALA
223
A
ALA
224
n
197
ALA
224
A
VAL
225
n
198
VAL
225
A
TRP
226
n
199
TRP
226
A
SER
227
n
200
SER
227
A
LEU
228
n
201
LEU
228
A
GLY
229
n
202
GLY
229
A
ILE
230
n
203
ILE
230
A
LEU
231
n
204
LEU
231
A
LEU
232
n
205
LEU
232
A
TYR
233
n
206
TYR
233
A
ASP
234
n
207
ASP
234
A
MET
235
n
208
MET
235
A
VAL
236
n
209
VAL
236
A
CYS
237
n
210
CYS
237
A
GLY
238
n
211
GLY
238
A
ASP
239
n
212
ASP
239
A
ILE
240
n
213
ILE
240
A
PRO
241
n
214
PRO
241
A
PHE
242
n
215
PHE
242
A
GLU
243
n
216
GLU
243
A
HIS
244
n
217
HIS
244
A
ASP
245
n
218
ASP
245
A
GLU
246
n
219
GLU
246
A
GLU
247
n
220
GLU
247
A
ILE
248
n
221
ILE
248
A
ILE
249
n
222
ILE
249
A
ARG
250
n
223
ARG
250
A
GLY
251
n
224
GLY
251
A
GLN
252
n
225
GLN
252
A
VAL
253
n
226
VAL
253
A
PHE
254
n
227
PHE
254
A
PHE
255
n
228
PHE
255
A
ARG
256
n
229
ARG
256
A
GLN
257
n
230
GLN
257
A
ARG
258
n
231
ARG
258
A
VAL
259
n
232
VAL
259
A
SER
260
n
233
SER
260
A
SER
261
n
234
SER
261
A
GLU
262
n
235
GLU
262
A
CYS
263
n
236
CYS
263
A
GLN
264
n
237
GLN
264
A
HIS
265
n
238
HIS
265
A
LEU
266
n
239
LEU
266
A
ILE
267
n
240
ILE
267
A
ARG
268
n
241
ARG
268
A
TRP
269
n
242
TRP
269
A
CYS
270
n
243
CYS
270
A
LEU
271
n
244
LEU
271
A
ALA
272
n
245
ALA
272
A
LEU
273
n
246
LEU
273
A
ARG
274
n
247
ARG
274
A
PRO
275
n
248
PRO
275
A
SER
276
n
249
SER
276
A
ASP
277
n
250
ASP
277
A
ARG
278
n
251
ARG
278
A
PRO
279
n
252
PRO
279
A
THR
280
n
253
THR
280
A
PHE
281
n
254
PHE
281
A
GLU
282
n
255
GLU
282
A
GLU
283
n
256
GLU
283
A
ILE
284
n
257
ILE
284
A
GLN
285
n
258
GLN
285
A
ASN
286
n
259
ASN
286
A
HIS
287
n
260
HIS
287
A
PRO
288
n
261
PRO
288
A
TRP
289
n
262
TRP
289
A
MET
290
n
263
MET
290
A
GLN
291
n
264
GLN
291
A
ASP
292
n
265
ASP
292
A
VAL
293
n
266
VAL
293
A
LEU
294
n
267
LEU
294
A
LEU
295
n
268
LEU
295
A
PRO
296
n
269
PRO
296
A
GLN
297
n
270
GLN
297
A
GLU
298
n
271
GLU
298
A
THR
299
n
272
THR
299
A
ALA
300
n
273
ALA
300
A
GLU
301
n
274
GLU
301
A
ILE
302
n
275
ILE
302
A
HIS
303
n
276
HIS
303
A
LEU
304
n
277
LEU
304
A
HIS
305
n
278
HIS
305
A
n
279
306
A
n
280
307
A
n
281
308
A
n
282
309
A
n
283
310
A
n
284
311
A
n
285
312
A
n
286
313
A
n
287
314
A
n
288
315
A
n
289
316
A
n
290
317
A
n
291
318
A
n
292
319
A
n
293
320
A
n
294
321
A
n
295
322
A
n
296
323
A
n
297
324
A
n
298
325
A
n
299
326
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
41
A
N
GLY
14
A
O
SER
54
A
O
SER
27
A
N
SER
51
A
N
SER
24
A
O
HIS
68
A
O
HIS
41
A
N
ALA
65
A
N
ALA
38
A
O
LEU
120
A
O
LEU
93
A
O
SER
115
A
O
SER
88
A
N
ARG
112
A
N
ARG
85
A
N
GLY
78
A
N
GLY
51
A
O
VAL
86
A
O
VAL
59
A
N
GLN
127
A
N
GLN
100
A
O
ILE
175
A
O
ILE
148
A
N
LEU
174
A
N
LEU
147
A
O
LYS
183
A
O
LYS
156
A
N
LEU
164
A
N
LEU
137
A
O
ALA
191
A
O
ALA
164
1
A
CG
ARG
73
A
CG
ARG
46
1
Y
1
A
CD
ARG
73
A
CD
ARG
46
1
Y
1
A
NE
ARG
73
A
NE
ARG
46
1
Y
1
A
CZ
ARG
73
A
CZ
ARG
46
1
Y
1
A
NH1
ARG
73
A
NH1
ARG
46
1
Y
1
A
NH2
ARG
73
A
NH2
ARG
46
1
Y
1
A
CG
ARG
105
A
CG
ARG
78
1
Y
1
A
CD
ARG
105
A
CD
ARG
78
1
Y
1
A
NE
ARG
105
A
NE
ARG
78
1
Y
1
A
CZ
ARG
105
A
CZ
ARG
78
1
Y
1
A
NH1
ARG
105
A
NH1
ARG
78
1
Y
1
A
NH2
ARG
105
A
NH2
ARG
78
1
Y
1
A
MET
28
A
MET
1
1
Y
1
A
LYS
29
A
LYS
2
1
Y
1
A
GLU
30
A
GLU
3
1
Y
1
A
LYS
31
A
LYS
4
1
Y
1
A
GLU
32
A
GLU
5
1
Y
1
A
SER
306
A
SER
279
1
Y
1
A
LEU
307
A
LEU
280
1
Y
1
A
SER
308
A
SER
281
1
Y
1
A
PRO
309
A
PRO
282
1
Y
1
A
GLY
310
A
GLY
283
1
Y
1
A
PRO
311
A
PRO
284
1
Y
1
A
SER
312
A
SER
285
1
Y
1
A
LYS
313
A
LYS
286
1
Y
1
A
LYS
314
A
LYS
287
1
Y
1
A
LEU
315
A
LEU
288
1
Y
1
A
ALA
316
A
ALA
289
1
Y
1
A
ALA
317
A
ALA
290
1
Y
1
A
ALA
318
A
ALA
291
1
Y
1
A
LEU
319
A
LEU
292
1
Y
1
A
GLU
320
A
GLU
293
1
Y
1
A
HIS
321
A
HIS
294
1
Y
1
A
HIS
322
A
HIS
295
1
Y
1
A
HIS
323
A
HIS
296
1
Y
1
A
HIS
324
A
HIS
297
1
Y
1
A
HIS
325
A
HIS
298
1
Y
1
A
HIS
326
A
HIS
299
1
Y
1
A
A
O
O
HOH
HOH
679
690
2.13
1_555
2_544
1
A
SER
98
174.04
-151.68
1
A
PHE
100
-56.22
108.33
1
A
SER
101
-99.00
38.55
1
A
ARG
166
79.23
-0.98
1
A
ASP
167
-145.43
42.16
1
A
ASP
186
65.64
95.79
121.780
41.1516
19.760
0.2286
0.1960
0.1976
1.964
37.280
1527
30079
5.08
97.43
random
1
FREE R-VALUE
MOLECULAR REPLACEMENT
1.964
37.280
219
2460
29
0
2212
0.2752
0.2583
2.0276
124
2119
5
81
34.801
1.964
84.073
5DIA
30084
0.043
1
30.200
221504
7.400
97.300
0.645
1.964
1.971
3.1
1397
207
1
6.700
0
70.200
0.019
9.113
84.073
1612
298
1
5.400
0
87.900
data collection
HKL-2000
data scaling
SCALA
phasing
PHASER
refinement
PHENIX
(PHENIX.REFINE: 1.9_1692)
data extraction
PDB_EXTRACT
3.15
data reduction
XDS
PIM1 in complex with Cpd36 ((1S,3S)-N1-(6-(5-(pyridin-3-yl)-1H-pyrazolo[3,4-c]pyridin-3-yl)pyridin-2-yl)cyclohexane-1,3-diamine)
1
N
N
2
N
N
3
N
N
A
PRO
33
A
PRO
6
HELX_P
A
GLN
37
A
GLN
10
1
AA1
5
A
ASP
72
A
ASP
45
HELX_P
A
ILE
74
A
ILE
47
5
AA2
3
A
MET
88
A
MET
61
HELX_P
A
SER
97
A
SER
70
1
AA3
10
A
LEU
129
A
LEU
102
HELX_P
A
GLY
137
A
GLY
110
1
AA4
9
A
GLN
140
A
GLN
113
HELX_P
A
CYS
161
A
CYS
134
1
AA5
22
A
LYS
169
A
LYS
142
HELX_P
A
GLU
171
A
GLU
144
5
AA6
3
A
THR
204
A
THR
177
HELX_P
A
SER
208
A
SER
181
5
AA7
5
A
PRO
209
A
PRO
182
HELX_P
A
HIS
216
A
HIS
189
1
AA8
8
A
HIS
219
A
HIS
192
HELX_P
A
GLY
238
A
GLY
211
1
AA9
20
A
HIS
244
A
HIS
217
HELX_P
A
GLY
251
A
GLY
224
1
AB1
8
A
SER
260
A
SER
233
HELX_P
A
LEU
271
A
LEU
244
1
AB2
12
A
ARG
274
A
ARG
247
HELX_P
A
ARG
278
A
ARG
251
5
AB3
5
A
THR
280
A
THR
253
HELX_P
A
ASN
286
A
ASN
259
1
AB4
7
A
HIS
287
A
HIS
260
HELX_P
A
GLN
291
A
GLN
264
5
AB5
5
A
LEU
295
A
LEU
268
HELX_P
A
LEU
304
A
LEU
277
1
AB6
10
Transferase/Transferase Inhibitor
PIM-1, kinase, ATP-competitive, Structure-based drug design, Transferase-Transferase Inhibitor complex
A
GLU
124
A
GLU
97
1
A
PRO
125
A
PRO
98
-4.66
PIM1_HUMAN
UNP
1
120
P11309
KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD
WFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG
SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIR
WCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSK
120
404
5DIA
29
313
P11309
A
1
2
286
1
initiating methionine
MET
28
5DIA
A
P11309
UNP
1
1
expression tag
LYS
314
5DIA
A
P11309
UNP
287
1
expression tag
LEU
315
5DIA
A
P11309
UNP
288
1
expression tag
ALA
316
5DIA
A
P11309
UNP
289
1
expression tag
ALA
317
5DIA
A
P11309
UNP
290
1
expression tag
ALA
318
5DIA
A
P11309
UNP
291
1
expression tag
LEU
319
5DIA
A
P11309
UNP
292
1
expression tag
GLU
320
5DIA
A
P11309
UNP
293
1
expression tag
HIS
321
5DIA
A
P11309
UNP
294
1
expression tag
HIS
322
5DIA
A
P11309
UNP
295
1
expression tag
HIS
323
5DIA
A
P11309
UNP
296
1
expression tag
HIS
324
5DIA
A
P11309
UNP
297
1
expression tag
HIS
325
5DIA
A
P11309
UNP
298
1
expression tag
HIS
326
5DIA
A
P11309
UNP
299
5
2
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
38
A
TYR
11
A
GLY
47
A
GLY
20
A
GLY
50
A
GLY
23
A
ARG
57
A
ARG
30
A
PRO
63
A
PRO
36
A
GLU
70
A
GLU
43
A
SER
115
A
SER
88
A
GLU
121
A
GLU
94
A
LEU
106
A
LEU
79
A
ARG
112
A
ARG
85
A
TRP
77
A
TRP
50
A
GLU
79
A
GLU
52
A
ARG
85
A
ARG
58
A
PRO
87
A
PRO
60
A
VAL
126
A
VAL
99
A
ASP
128
A
ASP
101
A
ILE
173
A
ILE
146
A
ASP
176
A
ASP
149
A
GLU
181
A
GLU
154
A
LEU
184
A
LEU
157
A
VAL
163
A
VAL
136
A
LEU
164
A
LEU
137
A
ALA
191
A
ALA
164
A
LEU
192
A
LEU
165
binding site for residue 5E6 A 401
A
5E6
401
Software
16
A
LEU
44
A
LEU
17
16
1_555
A
PHE
49
A
PHE
22
16
1_555
A
ALA
65
A
ALA
38
16
1_555
A
LYS
67
A
LYS
40
16
1_555
A
LEU
120
A
LEU
93
16
1_555
A
GLU
121
A
GLU
94
16
1_555
A
VAL
126
A
VAL
99
16
1_555
A
ASP
128
A
ASP
101
16
1_555
A
GLU
171
A
GLU
144
16
1_555
A
LEU
174
A
LEU
147
16
1_555
A
ILE
185
A
ILE
158
16
1_555
A
ASP
186
A
ASP
159
16
1_555
A
HOH
592
C
HOH
16
1_555
A
HOH
594
C
HOH
16
1_555
A
HOH
608
C
HOH
16
1_555
A
HOH
638
C
HOH
16
1_555
170
P 65