0.023769 0.000000 0.006860 0.000000 0.021079 0.000000 0.000000 0.000000 0.019465 0.00000 0.00000 0.00000 Blankenship, E. Lodowski, D.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 106.10 90.00 42.072 47.441 53.471 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing To be Published 0353 High resolution structures of S. erythraeus trypsin throughout the catalytic cycle 10.2210/pdb5dkm/pdb pdb_00005dkm 100 1 PIXEL 2012-10-20 DECTRIS PILATUS 6M cryo-cooled double crystal Si(111) SINGLE WAVELENGTH M x-ray 1 0.688 1.0 24-ID-C APS 0.688 SYNCHROTRON APS BEAMLINE 24-ID-C 23656.141 Trypsin 3.4.21.4 UNP residues 43-272 1 man polymer 18.015 water 306 nat water SET no no IVGGEDANVQDHPFTVALVTPDGQQFCGGTLAAPNKVVTAAHCTVGSQPADINVVSGRTVMSSNEGTVSKVTNVWVHPEY QDAAKGFDVSVLTLEAPVKEAPIELAKADDAGYAPDTAATILGWGNTSEGGQQADHLQKATVPVNSDDTCKQAYGEYTPD AMVCAGVPEGGVDTCQGDSGGPMVVNNKLIGVTSWGEGCARPGKPGVYARVGAYYDVLMEQINAGAVSAR IVGGEDANVQDHPFTVALVTPDGQQFCGGTLAAPNKVVTAAHCTVGSQPADINVVSGRTVMSSNEGTVSKVTNVWVHPEY QDAAKGFDVSVLTLEAPVKEAPIELAKADDAGYAPDTAATILGWGNTSEGGQQADHLQKATVPVNSDDTCKQAYGEYTPD AMVCAGVPEGGVDTCQGDSGGPMVVNNKLIGVTSWGEGCARPGKPGVYARVGAYYDVLMEQINAGAVSAR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 230 1836 Saccharopolyspora erythraea 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pQE-80L 1 2.17 43.25 VAPOR DIFFUSION, SITTING DROP 6.0 100 mM MES, pH 6.0, 36% PEG400, 100 mM BTP , 120 mM sodium chloride 298 pdbx_audit_support software pdbx_audit_support chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Author supporting evidence Refinement description Author supporting evidence Data collection Database references Refinement description 1 0 2017-03-08 1 1 2017-09-13 1 2 2017-11-22 1 3 2019-12-11 1 4 2023-09-27 _pdbx_audit_support.funding_organization _software.classification _pdbx_audit_support.funding_organization _database_2.pdbx_DOI _database_2.pdbx_database_accession United States National Institutes of Health/National Eye Institute (NIH/NEI) EY019718 N RCSB Y RCSB 2015-09-03 REL REL HOH water 4M7G PDB entry 4M7G PDB experimental model HOH 214 2 HOH HOH 301 A HOH 209 2 HOH HOH 302 A HOH 262 2 HOH HOH 303 A HOH 269 2 HOH HOH 304 A HOH 221 2 HOH HOH 305 A HOH 300 2 HOH HOH 306 A HOH 171 2 HOH HOH 307 A HOH 168 2 HOH HOH 308 A HOH 215 2 HOH HOH 309 A HOH 84 2 HOH HOH 310 A HOH 231 2 HOH HOH 311 A HOH 190 2 HOH HOH 312 A HOH 114 2 HOH HOH 313 A HOH 27 2 HOH HOH 314 A HOH 40 2 HOH HOH 315 A HOH 259 2 HOH HOH 316 A HOH 285 2 HOH HOH 317 A HOH 238 2 HOH HOH 318 A HOH 85 2 HOH HOH 319 A HOH 148 2 HOH HOH 320 A HOH 69 2 HOH HOH 321 A HOH 297 2 HOH HOH 322 A HOH 156 2 HOH HOH 323 A HOH 182 2 HOH HOH 324 A HOH 277 2 HOH HOH 325 A HOH 248 2 HOH HOH 326 A HOH 158 2 HOH HOH 327 A HOH 201 2 HOH HOH 328 A HOH 163 2 HOH HOH 329 A HOH 218 2 HOH HOH 330 A HOH 185 2 HOH HOH 331 A HOH 145 2 HOH HOH 332 A HOH 138 2 HOH HOH 333 A HOH 39 2 HOH HOH 334 A HOH 152 2 HOH HOH 335 A HOH 176 2 HOH HOH 336 A HOH 71 2 HOH HOH 337 A HOH 234 2 HOH HOH 338 A HOH 33 2 HOH HOH 339 A HOH 298 2 HOH HOH 340 A HOH 232 2 HOH HOH 341 A HOH 88 2 HOH HOH 342 A HOH 41 2 HOH HOH 343 A HOH 73 2 HOH HOH 344 A HOH 192 2 HOH HOH 345 A HOH 195 2 HOH HOH 346 A HOH 66 2 HOH HOH 347 A HOH 184 2 HOH HOH 348 A HOH 291 2 HOH HOH 349 A HOH 205 2 HOH HOH 350 A HOH 9 2 HOH HOH 351 A HOH 14 2 HOH HOH 352 A HOH 58 2 HOH HOH 353 A HOH 45 2 HOH HOH 354 A HOH 50 2 HOH HOH 355 A HOH 279 2 HOH HOH 356 A HOH 65 2 HOH HOH 357 A HOH 63 2 HOH HOH 358 A HOH 293 2 HOH HOH 359 A HOH 181 2 HOH HOH 360 A HOH 59 2 HOH HOH 361 A HOH 188 2 HOH HOH 362 A HOH 53 2 HOH HOH 363 A HOH 54 2 HOH HOH 364 A HOH 162 2 HOH HOH 365 A HOH 194 2 HOH HOH 366 A HOH 25 2 HOH HOH 367 A HOH 140 2 HOH HOH 368 A HOH 120 2 HOH HOH 369 A HOH 5 2 HOH HOH 370 A HOH 42 2 HOH HOH 371 A HOH 198 2 HOH HOH 372 A HOH 220 2 HOH HOH 373 A HOH 142 2 HOH HOH 374 A HOH 29 2 HOH HOH 375 A HOH 290 2 HOH HOH 376 A HOH 143 2 HOH HOH 377 A HOH 90 2 HOH HOH 378 A HOH 299 2 HOH HOH 379 A HOH 233 2 HOH HOH 380 A HOH 86 2 HOH HOH 381 A HOH 15 2 HOH HOH 382 A HOH 105 2 HOH HOH 383 A HOH 4 2 HOH HOH 384 A HOH 78 2 HOH HOH 385 A HOH 288 2 HOH HOH 386 A HOH 87 2 HOH HOH 387 A HOH 6 2 HOH HOH 388 A HOH 286 2 HOH HOH 389 A HOH 169 2 HOH HOH 390 A HOH 202 2 HOH HOH 391 A HOH 2 2 HOH HOH 392 A HOH 133 2 HOH HOH 393 A HOH 149 2 HOH HOH 394 A HOH 47 2 HOH HOH 395 A HOH 13 2 HOH HOH 396 A HOH 230 2 HOH HOH 397 A HOH 79 2 HOH HOH 398 A HOH 183 2 HOH HOH 399 A HOH 123 2 HOH HOH 400 A HOH 107 2 HOH HOH 401 A HOH 292 2 HOH HOH 402 A HOH 55 2 HOH HOH 403 A HOH 151 2 HOH HOH 404 A HOH 191 2 HOH HOH 405 A HOH 303 2 HOH HOH 406 A HOH 161 2 HOH HOH 407 A HOH 31 2 HOH HOH 408 A HOH 35 2 HOH HOH 409 A HOH 125 2 HOH HOH 410 A HOH 62 2 HOH HOH 411 A HOH 113 2 HOH HOH 412 A HOH 1 2 HOH HOH 413 A HOH 44 2 HOH HOH 414 A HOH 92 2 HOH HOH 415 A HOH 74 2 HOH HOH 416 A HOH 264 2 HOH HOH 417 A HOH 260 2 HOH HOH 418 A HOH 109 2 HOH HOH 419 A HOH 89 2 HOH HOH 420 A HOH 57 2 HOH HOH 421 A HOH 115 2 HOH HOH 422 A HOH 165 2 HOH HOH 423 A HOH 282 2 HOH HOH 424 A HOH 170 2 HOH HOH 425 A HOH 51 2 HOH HOH 426 A HOH 22 2 HOH HOH 427 A HOH 98 2 HOH HOH 428 A HOH 10 2 HOH HOH 429 A HOH 7 2 HOH HOH 430 A HOH 104 2 HOH HOH 431 A HOH 178 2 HOH HOH 432 A HOH 24 2 HOH HOH 433 A HOH 12 2 HOH HOH 434 A HOH 101 2 HOH HOH 435 A HOH 111 2 HOH HOH 436 A HOH 146 2 HOH HOH 437 A HOH 11 2 HOH HOH 438 A HOH 229 2 HOH HOH 439 A HOH 136 2 HOH HOH 440 A HOH 193 2 HOH HOH 441 A HOH 196 2 HOH HOH 442 A HOH 72 2 HOH HOH 443 A HOH 116 2 HOH HOH 444 A HOH 199 2 HOH HOH 445 A HOH 208 2 HOH HOH 446 A HOH 189 2 HOH HOH 447 A HOH 8 2 HOH HOH 448 A HOH 127 2 HOH HOH 449 A HOH 263 2 HOH HOH 450 A HOH 137 2 HOH HOH 451 A HOH 121 2 HOH HOH 452 A HOH 77 2 HOH HOH 453 A HOH 49 2 HOH HOH 454 A HOH 236 2 HOH HOH 455 A HOH 43 2 HOH HOH 456 A HOH 56 2 HOH HOH 457 A HOH 93 2 HOH HOH 458 A HOH 26 2 HOH HOH 459 A HOH 48 2 HOH HOH 460 A HOH 94 2 HOH HOH 461 A HOH 203 2 HOH HOH 462 A HOH 37 2 HOH HOH 463 A HOH 187 2 HOH HOH 464 A HOH 249 2 HOH HOH 465 A HOH 20 2 HOH HOH 466 A HOH 197 2 HOH HOH 467 A HOH 61 2 HOH HOH 468 A HOH 166 2 HOH HOH 469 A HOH 68 2 HOH HOH 470 A HOH 261 2 HOH HOH 471 A HOH 30 2 HOH HOH 472 A HOH 108 2 HOH HOH 473 A HOH 227 2 HOH HOH 474 A HOH 147 2 HOH HOH 475 A HOH 240 2 HOH HOH 476 A HOH 34 2 HOH HOH 477 A HOH 36 2 HOH HOH 478 A HOH 246 2 HOH HOH 479 A HOH 210 2 HOH HOH 480 A HOH 207 2 HOH HOH 481 A HOH 302 2 HOH HOH 482 A HOH 258 2 HOH HOH 483 A HOH 206 2 HOH HOH 484 A HOH 80 2 HOH HOH 485 A HOH 112 2 HOH HOH 486 A HOH 175 2 HOH HOH 487 A HOH 67 2 HOH HOH 488 A HOH 274 2 HOH HOH 489 A HOH 3 2 HOH HOH 490 A HOH 173 2 HOH HOH 491 A HOH 235 2 HOH HOH 492 A HOH 275 2 HOH HOH 493 A HOH 150 2 HOH HOH 494 A HOH 265 2 HOH HOH 495 A HOH 266 2 HOH HOH 496 A HOH 95 2 HOH HOH 497 A HOH 153 2 HOH HOH 498 A HOH 91 2 HOH HOH 499 A HOH 122 2 HOH HOH 500 A HOH 167 2 HOH HOH 501 A HOH 38 2 HOH HOH 502 A HOH 21 2 HOH HOH 503 A HOH 226 2 HOH HOH 504 A HOH 126 2 HOH HOH 505 A HOH 16 2 HOH HOH 506 A HOH 134 2 HOH HOH 507 A HOH 110 2 HOH HOH 508 A HOH 228 2 HOH HOH 509 A HOH 124 2 HOH HOH 510 A HOH 254 2 HOH HOH 511 A HOH 99 2 HOH HOH 512 A HOH 106 2 HOH HOH 513 A HOH 273 2 HOH HOH 514 A HOH 28 2 HOH HOH 515 A HOH 96 2 HOH HOH 516 A HOH 76 2 HOH HOH 517 A HOH 257 2 HOH HOH 518 A HOH 135 2 HOH HOH 519 A HOH 242 2 HOH HOH 520 A HOH 250 2 HOH HOH 521 A HOH 131 2 HOH HOH 522 A HOH 83 2 HOH HOH 523 A HOH 213 2 HOH HOH 524 A HOH 271 2 HOH HOH 525 A HOH 46 2 HOH HOH 526 A HOH 118 2 HOH HOH 527 A HOH 283 2 HOH HOH 528 A HOH 144 2 HOH HOH 529 A HOH 289 2 HOH HOH 530 A HOH 255 2 HOH HOH 531 A HOH 241 2 HOH HOH 532 A HOH 211 2 HOH HOH 533 A HOH 276 2 HOH HOH 534 A HOH 159 2 HOH HOH 535 A HOH 243 2 HOH HOH 536 A HOH 219 2 HOH HOH 537 A HOH 225 2 HOH HOH 538 A HOH 174 2 HOH HOH 539 A HOH 217 2 HOH HOH 540 A HOH 223 2 HOH HOH 541 A HOH 103 2 HOH HOH 542 A HOH 160 2 HOH HOH 543 A HOH 306 2 HOH HOH 544 A HOH 177 2 HOH HOH 545 A HOH 305 2 HOH HOH 546 A HOH 216 2 HOH HOH 547 A HOH 222 2 HOH HOH 548 A HOH 154 2 HOH HOH 549 A HOH 200 2 HOH HOH 550 A HOH 239 2 HOH HOH 551 A HOH 117 2 HOH HOH 552 A HOH 256 2 HOH HOH 553 A HOH 23 2 HOH HOH 554 A HOH 224 2 HOH HOH 555 A HOH 204 2 HOH HOH 556 A HOH 179 2 HOH HOH 557 A HOH 132 2 HOH HOH 558 A HOH 155 2 HOH HOH 559 A HOH 245 2 HOH HOH 560 A HOH 287 2 HOH HOH 561 A HOH 32 2 HOH HOH 562 A HOH 284 2 HOH HOH 563 A HOH 180 2 HOH HOH 564 A HOH 129 2 HOH HOH 565 A HOH 270 2 HOH HOH 566 A HOH 64 2 HOH HOH 567 A HOH 128 2 HOH HOH 568 A HOH 244 2 HOH HOH 569 A HOH 60 2 HOH HOH 570 A HOH 164 2 HOH HOH 571 A HOH 272 2 HOH HOH 572 A HOH 157 2 HOH HOH 573 A HOH 247 2 HOH HOH 574 A HOH 75 2 HOH HOH 575 A HOH 301 2 HOH HOH 576 A HOH 19 2 HOH HOH 577 A HOH 97 2 HOH HOH 578 A HOH 82 2 HOH HOH 579 A HOH 212 2 HOH HOH 580 A HOH 237 2 HOH HOH 581 A HOH 294 2 HOH HOH 582 A HOH 139 2 HOH HOH 583 A HOH 280 2 HOH HOH 584 A HOH 52 2 HOH HOH 585 A HOH 141 2 HOH HOH 586 A HOH 253 2 HOH HOH 587 A HOH 296 2 HOH HOH 588 A HOH 281 2 HOH HOH 589 A HOH 119 2 HOH HOH 590 A HOH 267 2 HOH HOH 591 A HOH 186 2 HOH HOH 592 A HOH 17 2 HOH HOH 593 A HOH 268 2 HOH HOH 594 A HOH 130 2 HOH HOH 595 A HOH 81 2 HOH HOH 596 A HOH 295 2 HOH HOH 597 A HOH 172 2 HOH HOH 598 A HOH 304 2 HOH HOH 599 A HOH 18 2 HOH HOH 600 A HOH 102 2 HOH HOH 601 A HOH 278 2 HOH HOH 602 A HOH 251 2 HOH HOH 603 A HOH 252 2 HOH HOH 604 A HOH 70 2 HOH HOH 605 A HOH 100 2 HOH HOH 606 A ILE 1 n 1 ILE 1 A VAL 2 n 2 VAL 2 A GLY 3 n 3 GLY 3 A GLY 4 n 4 GLY 4 A GLU 5 n 5 GLU 5 A ASP 6 n 6 ASP 6 A ALA 7 n 7 ALA 7 A ASN 8 n 8 ASN 8 A VAL 9 n 9 VAL 9 A GLN 10 n 10 GLN 10 A ASP 11 n 11 ASP 11 A HIS 12 n 12 HIS 12 A PRO 13 n 13 PRO 13 A PHE 14 n 14 PHE 14 A THR 15 n 15 THR 15 A VAL 16 n 16 VAL 16 A ALA 17 n 17 ALA 17 A LEU 18 n 18 LEU 18 A VAL 19 n 19 VAL 19 A THR 20 n 20 THR 20 A PRO 21 n 21 PRO 21 A ASP 22 n 22 ASP 22 A GLY 23 n 23 GLY 23 A GLN 24 n 24 GLN 24 A GLN 25 n 25 GLN 25 A PHE 26 n 26 PHE 26 A CYS 27 n 27 CYS 27 A GLY 28 n 28 GLY 28 A GLY 29 n 29 GLY 29 A THR 30 n 30 THR 30 A LEU 31 n 31 LEU 31 A ALA 32 n 32 ALA 32 A ALA 33 n 33 ALA 33 A PRO 34 n 34 PRO 34 A ASN 35 n 35 ASN 35 A LYS 36 n 36 LYS 36 A VAL 37 n 37 VAL 37 A VAL 38 n 38 VAL 38 A THR 39 n 39 THR 39 A ALA 40 n 40 ALA 40 A ALA 41 n 41 ALA 41 A HIS 42 n 42 HIS 42 A CYS 43 n 43 CYS 43 A THR 44 n 44 THR 44 A VAL 45 n 45 VAL 45 A GLY 46 n 46 GLY 46 A SER 47 n 47 SER 47 A GLN 48 n 48 GLN 48 A PRO 49 n 49 PRO 49 A ALA 50 n 50 ALA 50 A ASP 51 n 51 ASP 51 A ILE 52 n 52 ILE 52 A ASN 53 n 53 ASN 53 A VAL 54 n 54 VAL 54 A VAL 55 n 55 VAL 55 A SER 56 n 56 SER 56 A GLY 57 n 57 GLY 57 A ARG 58 n 58 ARG 58 A THR 59 n 59 THR 59 A VAL 60 n 60 VAL 60 A MET 61 n 61 MET 61 A SER 62 n 62 SER 62 A SER 63 n 63 SER 63 A ASN 64 n 64 ASN 64 A GLU 65 n 65 GLU 65 A GLY 66 n 66 GLY 66 A THR 67 n 67 THR 67 A VAL 68 n 68 VAL 68 A SER 69 n 69 SER 69 A LYS 70 n 70 LYS 70 A VAL 71 n 71 VAL 71 A THR 72 n 72 THR 72 A ASN 73 n 73 ASN 73 A VAL 74 n 74 VAL 74 A TRP 75 n 75 TRP 75 A VAL 76 n 76 VAL 76 A HIS 77 n 77 HIS 77 A PRO 78 n 78 PRO 78 A GLU 79 n 79 GLU 79 A TYR 80 n 80 TYR 80 A GLN 81 n 81 GLN 81 A ASP 82 n 82 ASP 82 A ALA 83 n 83 ALA 83 A ALA 84 n 84 ALA 84 A LYS 85 n 85 LYS 85 A GLY 86 n 86 GLY 86 A PHE 87 n 87 PHE 87 A ASP 88 n 88 ASP 88 A VAL 89 n 89 VAL 89 A SER 90 n 90 SER 90 A VAL 91 n 91 VAL 91 A LEU 92 n 92 LEU 92 A THR 93 n 93 THR 93 A LEU 94 n 94 LEU 94 A GLU 95 n 95 GLU 95 A ALA 96 n 96 ALA 96 A PRO 97 n 97 PRO 97 A VAL 98 n 98 VAL 98 A LYS 99 n 99 LYS 99 A GLU 100 n 100 GLU 100 A ALA 101 n 101 ALA 101 A PRO 102 n 102 PRO 102 A ILE 103 n 103 ILE 103 A GLU 104 n 104 GLU 104 A LEU 105 n 105 LEU 105 A ALA 106 n 106 ALA 106 A LYS 107 n 107 LYS 107 A ALA 108 n 108 ALA 108 A ASP 109 n 109 ASP 109 A ASP 110 n 110 ASP 110 A ALA 111 n 111 ALA 111 A GLY 112 n 112 GLY 112 A TYR 113 n 113 TYR 113 A ALA 114 n 114 ALA 114 A PRO 115 n 115 PRO 115 A ASP 116 n 116 ASP 116 A THR 117 n 117 THR 117 A ALA 118 n 118 ALA 118 A ALA 119 n 119 ALA 119 A THR 120 n 120 THR 120 A ILE 121 n 121 ILE 121 A LEU 122 n 122 LEU 122 A GLY 123 n 123 GLY 123 A TRP 124 n 124 TRP 124 A GLY 125 n 125 GLY 125 A ASN 126 n 126 ASN 126 A THR 127 n 127 THR 127 A SER 128 n 128 SER 128 A GLU 129 n 129 GLU 129 A GLY 130 n 130 GLY 130 A GLY 131 n 131 GLY 131 A GLN 132 n 132 GLN 132 A GLN 133 n 133 GLN 133 A ALA 134 n 134 ALA 134 A ASP 135 n 135 ASP 135 A HIS 136 n 136 HIS 136 A LEU 137 n 137 LEU 137 A GLN 138 n 138 GLN 138 A LYS 139 n 139 LYS 139 A ALA 140 n 140 ALA 140 A THR 141 n 141 THR 141 A VAL 142 n 142 VAL 142 A PRO 143 n 143 PRO 143 A VAL 144 n 144 VAL 144 A ASN 145 n 145 ASN 145 A SER 146 n 146 SER 146 A ASP 147 n 147 ASP 147 A ASP 148 n 148 ASP 148 A THR 149 n 149 THR 149 A CYS 150 n 150 CYS 150 A LYS 151 n 151 LYS 151 A GLN 152 n 152 GLN 152 A ALA 153 n 153 ALA 153 A TYR 154 n 154 TYR 154 A GLY 155 n 155 GLY 155 A GLU 156 n 156 GLU 156 A TYR 157 n 157 TYR 157 A THR 158 n 158 THR 158 A PRO 159 n 159 PRO 159 A ASP 160 n 160 ASP 160 A ALA 161 n 161 ALA 161 A MET 162 n 162 MET 162 A VAL 163 n 163 VAL 163 A CYS 164 n 164 CYS 164 A ALA 165 n 165 ALA 165 A GLY 166 n 166 GLY 166 A VAL 167 n 167 VAL 167 A PRO 168 n 168 PRO 168 A GLU 169 n 169 GLU 169 A GLY 170 n 170 GLY 170 A GLY 171 n 171 GLY 171 A VAL 172 n 172 VAL 172 A ASP 173 n 173 ASP 173 A THR 174 n 174 THR 174 A CYS 175 n 175 CYS 175 A GLN 176 n 176 GLN 176 A GLY 177 n 177 GLY 177 A ASP 178 n 178 ASP 178 A SER 179 n 179 SER 179 A GLY 180 n 180 GLY 180 A GLY 181 n 181 GLY 181 A PRO 182 n 182 PRO 182 A MET 183 n 183 MET 183 A VAL 184 n 184 VAL 184 A VAL 185 n 185 VAL 185 A ASN 186 n 186 ASN 186 A ASN 187 n 187 ASN 187 A LYS 188 n 188 LYS 188 A LEU 189 n 189 LEU 189 A ILE 190 n 190 ILE 190 A GLY 191 n 191 GLY 191 A VAL 192 n 192 VAL 192 A THR 193 n 193 THR 193 A SER 194 n 194 SER 194 A TRP 195 n 195 TRP 195 A GLY 196 n 196 GLY 196 A GLU 197 n 197 GLU 197 A GLY 198 n 198 GLY 198 A CYS 199 n 199 CYS 199 A ALA 200 n 200 ALA 200 A ARG 201 n 201 ARG 201 A PRO 202 n 202 PRO 202 A GLY 203 n 203 GLY 203 A LYS 204 n 204 LYS 204 A PRO 205 n 205 PRO 205 A GLY 206 n 206 GLY 206 A VAL 207 n 207 VAL 207 A TYR 208 n 208 TYR 208 A ALA 209 n 209 ALA 209 A ARG 210 n 210 ARG 210 A VAL 211 n 211 VAL 211 A GLY 212 n 212 GLY 212 A ALA 213 n 213 ALA 213 A TYR 214 n 214 TYR 214 A TYR 215 n 215 TYR 215 A ASP 216 n 216 ASP 216 A VAL 217 n 217 VAL 217 A LEU 218 n 218 LEU 218 A MET 219 n 219 MET 219 A GLU 220 n 220 GLU 220 A GLN 221 n 221 GLN 221 A ILE 222 n 222 ILE 222 A ASN 223 n 223 ASN 223 A ALA 224 n 224 ALA 224 A GLY 225 n 225 GLY 225 A ALA 226 n 226 ALA 226 A VAL 227 n 227 VAL 227 A SER 228 n 228 SER 228 A ALA 229 n 229 ALA 229 A ARG 230 n 230 ARG 230 A author_and_software_defined_assembly PISA 1 monomeric 0 0 9960 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 5 A N GLU 5 A O LYS 139 A O LYS 139 A O VAL 142 A O VAL 142 A N ALA 119 A N ALA 119 A N THR 120 A N THR 120 A O VAL 184 A O VAL 184 A N MET 183 A N MET 183 A O ILE 190 A O ILE 190 A O LEU 189 A O LEU 189 A N GLU 104 A N GLU 104 A N GLU 5 A N GLU 5 A O LYS 139 A O LYS 139 A O VAL 142 A O VAL 142 A N ALA 119 A N ALA 119 A N THR 120 A N THR 120 A O VAL 184 A O VAL 184 A N MET 183 A N MET 183 A O ILE 190 A O ILE 190 A N TRP 195 A N TRP 195 A O VAL 207 A O VAL 207 A O TYR 208 A O TYR 208 A N VAL 163 A N VAL 163 A N LEU 18 A N LEU 18 A O CYS 27 A O CYS 27 A N THR 30 A N THR 30 A O VAL 38 A O VAL 38 A N VAL 37 A N VAL 37 A O LEU 92 A O LEU 92 A O THR 93 A O THR 93 A N THR 72 A N THR 72 A O SER 69 A O SER 69 A N VAL 54 A N VAL 54 A O VAL 55 A O VAL 55 A N ALA 17 A N ALA 17 1 A A OG1 OD1 THR ASP 20 22 1.95 B 1 A SER 194 -131.44 -63.98 0.1295 0.1194 0.1199 0.920 28.194 6931 139424 4.97 99.66 0.08 1 FREE R-VALUE 1.33 MOLECULAR REPLACEMENT 14.23 0.90 1.11 PDB entry 4M7G ML FLAT BULK SOLVENT MODEL 0.920 28.194 306 1963 0 0 1657 0.008 1978 1.067 2742 16.210 735 0.092 302 0.008 385 0.3442 0.3419 0.9305 221 4392 99.00 0.3137 0.3086 0.9414 193 4398 100.00 0.2893 0.2767 0.9529 263 4398 100.00 0.2609 0.2764 0.9649 227 4372 100.00 0.2384 0.2315 0.9776 226 4443 100.00 0.2218 0.2171 0.9910 229 4390 100.00 0.2105 0.2027 1.0052 217 4445 100.00 0.2039 0.1804 1.0202 246 4381 100.00 0.1817 0.1652 1.0361 224 4424 100.00 0.1822 0.1533 1.0531 241 4415 100.00 0.1555 0.1395 1.0713 210 4409 100.00 0.1337 0.1300 1.0908 247 4387 100.00 0.1485 0.1416 1.1118 212 4336 98.00 0.1361 0.1149 1.1344 214 4451 100.00 0.1441 0.1241 1.1591 235 4328 99.00 0.1126 0.0997 1.1861 211 4463 100.00 0.1068 0.0891 1.2157 242 4412 100.00 0.1017 0.0866 1.2486 200 4455 100.00 0.0979 0.0880 1.2854 249 4372 100.00 0.1096 0.0882 1.3268 234 4444 100.00 0.1197 0.0938 1.3743 232 4354 99.00 0.0909 0.0788 1.4293 230 4417 100.00 0.0925 0.0833 1.4943 238 4442 100.00 0.1050 0.0852 1.5731 249 4415 100.00 0.0941 0.0839 1.6717 230 4461 100.00 0.1039 0.0883 1.8007 248 4382 100.00 0.1126 0.0917 1.9819 261 4447 100.00 0.1024 0.0999 2.2686 218 4462 100.00 0.1174 0.1126 2.8577 231 4460 99.00 0.1402 0.1375 28.2077 253 4538 100.00 8.22 0.87 28.91 5DKM 159546 0.998 0.072 1 11.9 6.4 99.8 2.601 0.88 0.89 0.4 0.275 1 5.8 99.2 refinement PHENIX (dev_2328: ???) data extraction PDB_EXTRACT 3.15 model building Coot data scaling XDS data reduction XDS data scaling Aimless phasing PHASER S. erythraea trypsin Michaelis-Menten complex 1 N N 2 N N A ASN 8 A ASN 8 HELX_P A HIS 12 A HIS 12 5 AA1 5 A ALA 40 A ALA 40 HELX_P A VAL 45 A VAL 45 1 AA2 6 A GLN 48 A GLN 48 HELX_P A ASP 51 A ASP 51 5 AA3 4 A ASP 82 A ASP 82 HELX_P A GLY 86 A GLY 86 5 AA4 5 A ASP 110 A ASP 110 HELX_P A ALA 114 A ALA 114 5 AA5 5 A SER 146 A SER 146 HELX_P A TYR 154 A TYR 154 1 AA6 9 A TYR 214 A TYR 214 HELX_P A ASN 223 A ASN 223 1 AA7 10 disulf 2.077 A CYS 27 A SG CYS 27 1_555 A CYS 43 A SG CYS 43 1_555 disulf 2.064 A A A CYS 150 A SG CYS 150 1_555 A CYS 164 A SG CYS 164 1_555 disulf 1.998 B B A CYS 150 A SG CYS 150 1_555 A CYS 164 A SG CYS 164 1_555 disulf 2.084 A CYS 175 A SG CYS 175 1_555 A CYS 199 A SG CYS 199 1_555 HYDROLASE serine protease, HYDROLASE Q54137_SACER UNP 1 43 Q54137 IVGGEDANVQDHPFTVALVTPDGQQFCGGTLAAPNKVVTAAHCTVGSQPADINVVSGRTVMSSNEGTVSKVTNVWVHPEY QDAAKGFDVSVLTLEAPVKEAPIELAKADDAGYAPDTAATILGWGNTSEGGQQADHLQKATVPVNSDDTCKQAYGEYTPD AMVCAGVPEGGVDTCQGDSGGPMVVNNKLIGVTSWGEGCARPGKPGVYARVGAYYDVLMEQINAGAVSAR 43 272 5DKM 1 230 Q54137 A 1 1 230 6 7 7 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 5 A GLU 5 A ASP 6 A ASP 6 A GLN 138 A GLN 138 A PRO 143 A PRO 143 A ALA 118 A ALA 118 A GLY 123 A GLY 123 A PRO 182 A PRO 182 A VAL 185 A VAL 185 A LYS 188 A LYS 188 A TRP 195 A TRP 195 A GLU 104 A GLU 104 A LEU 105 A LEU 105 A GLU 5 A GLU 5 A ASP 6 A ASP 6 A GLN 138 A GLN 138 A PRO 143 A PRO 143 A ALA 118 A ALA 118 A GLY 123 A GLY 123 A PRO 182 A PRO 182 A VAL 185 A VAL 185 A LYS 188 A LYS 188 A TRP 195 A TRP 195 A GLY 206 A GLY 206 A ARG 210 A ARG 210 A MET 162 A MET 162 A ALA 165 A ALA 165 A THR 15 A THR 15 A VAL 19 A VAL 19 A GLN 25 A GLN 25 A ALA 33 A ALA 33 A LYS 36 A LYS 36 A THR 39 A THR 39 A SER 90 A SER 90 A LEU 94 A LEU 94 A THR 67 A THR 67 A VAL 76 A VAL 76 A ASN 53 A ASN 53 A SER 56 A SER 56 A THR 15 A THR 15 A VAL 19 A VAL 19 4 P 1 21 1