0.012984
0.000000
0.000000
0.000000
0.012982
0.000000
0.000000
0.000000
0.011733
0.000000
0.000000
0.000000
Gorman, J.
Kwong, P.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
77.016
77.027
85.227
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-mannopyranose
beta-D-mannose; D-mannose; mannose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H11 N O6 S
261.252
n
O-SULFO-L-TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
S
C
N
78
R
C
N
79
N
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
R
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
S
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
S
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
C
N
118
N
C
N
119
N
O
N
120
N
N
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
N
N
133
S
C
N
134
N
C
N
135
N
O
N
136
N
C
N
137
N
C
N
138
N
C
N
139
N
O
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
N
C
N
153
N
C
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
N
C
Y
166
N
C
Y
167
N
N
Y
168
N
C
Y
169
N
C
Y
170
N
N
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
O
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
S
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
N
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
S
N
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
R
C
N
275
R
C
N
276
R
C
N
277
S
C
N
278
R
C
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
N
N
283
N
O
N
284
N
O
N
285
N
O
N
286
N
O
N
287
N
O
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
N
N
328
S
C
N
329
N
C
N
330
N
O
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
O
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
R
C
N
363
N
O
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
N
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
N
413
N
O
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
C
N
435
N
O
N
436
N
S
N
437
N
O
N
438
N
O
N
439
N
O
N
440
N
C
N
441
N
O
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
Y
164
N
sing
Y
165
N
doub
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
N
169
N
sing
Y
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
Y
302
N
doub
Y
303
N
sing
Y
304
N
sing
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
Y
371
N
doub
Y
372
N
sing
Y
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
Y
421
N
doub
Y
422
N
sing
Y
423
N
sing
N
424
N
sing
Y
425
N
doub
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
doub
N
434
N
doub
N
435
N
sing
N
436
N
sing
N
437
N
doub
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
doub
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
US
J.Virol.
JOVIAM
0825
1098-5514
90
76
91
10.1128/JVI.01791-15
26468542
New Member of the V1V2-Directed CAP256-VRC26 Lineage That Shows Increased Breadth and Exceptional Potency.
2015
10.2210/pdb5dt1/pdb
pdb_00005dt1
100
1
CCD
2014-11-26
MARMOSAIC 300 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
22-ID
APS
1.0
SYNCHROTRON
APS BEAMLINE 22-ID
28083.482
Fab Heavy chain of broadly neutralizing antibody VRC26.25
1
man
polymer
23052.611
Fab Light chain of broadly neutralizing antibody VRC26.25
1
man
polymer
586.542
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
18.015
water
333
nat
water
no
yes
QVQLVESGGGVVQPGTSLRLSCAASQFRFDGYGMHWVRQAPGKGLEWVASISHDGIKKYHAEKVWGRFTISRDNSKNTLY
LQMNSLRPEDTALYYCAKDLREDECEEWWSD(TYS)(TYS)DFGKQLPCAKSRGGLVGIADNWGQGTMVTVSSASTKGPS
VFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNH
KPSNTKVDKRVEPKSCDKGLEVLFQ
QVQLVESGGGVVQPGTSLRLSCAASQFRFDGYGMHWVRQAPGKGLEWVASISHDGIKKYHAEKVWGRFTISRDNSKNTLY
LQMNSLRPEDTALYYCAKDLREDECEEWWSDYYDFGKQLPCAKSRGGLVGIADNWGQGTMVTVSSASTKGPSVFPLAPSS
KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVD
KRVEPKSCDKGLEVLFQ
H
polypeptide(L)
no
no
QSVLTQPPSVSAAPGQKVTISCSGNTSNIGNNFVSWYQQRPGRAPQLLIYETDKRPSGIPDRFSASKSGTSGTLAITGLQ
TGDEADYYCATWAASLSSARVFGTGTKVIVLVQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV
KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QSVLTQPPSVSAAPGQKVTISCSGNTSNIGNNFVSWYQQRPGRAPQLLIYETDKRPSGIPDRFSASKSGTSGTLAITGLQ
TGDEADYYCATWAASLSSARVFGTGTKVIVLVQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV
KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
257
9606
Homo sapiens
Expi 293 cells
9606
Homo sapiens
Biological sequence
sample
1
217
9606
Homo sapiens
Expi 293 cells
9606
Homo sapiens
Biological sequence
1
2.54
51.61
VAPOR DIFFUSION
7.5
Crystals grown in a reservoir solution of 23% PEG 8000 and 0.1M HEPES pH 7.5 and flash frozen in liquid nitrogen with 20% PEG 400 as a cryoprotectant
7.5
293
atom_site
chem_comp
citation
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_oper_list
pdbx_struct_special_symmetry
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
chem_comp_atom
chem_comp_bond
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Database references
Atomic model
Data collection
Database references
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
Data collection
1
0
2015-10-21
1
1
2015-10-28
1
2
2015-12-30
2
0
2020-07-29
2
1
2023-09-27
2
2
2023-11-15
_atom_site.auth_asym_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_chem_comp.name
_chem_comp.type
_citation.journal_id_CSD
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_special_symmetry.label_asym_id
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
L
NAG
1026
n
A
NAG
1
L
NAG
1027
n
A
NAG
2
L
BMA
1028
n
A
BMA
3
DManpb
b-D-mannopyranose
b-D-Manp
Man
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Same antibody lineage
Same antibody lineage
Same antibody lineage
Same antibody lineage
Same antibody lineage
Same antibody lineage
Same antibody lineage
N
RCSB
Y
RCSB
2015-09-17
REL
REL
oligosaccharide
DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}
3
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
3
O1
HO4
sing
C1
O4
BMA
NAG
3
2
3
O1
HO4
sing
n
n
n
HOH
water
4OD1
PDB
experimental model
HOH
301
4
HOH
HOH
301
H
HOH
90
4
HOH
HOH
302
H
HOH
123
4
HOH
HOH
303
H
HOH
40
4
HOH
HOH
304
H
HOH
247
4
HOH
HOH
305
H
HOH
112
4
HOH
HOH
306
H
HOH
104
4
HOH
HOH
307
H
HOH
191
4
HOH
HOH
308
H
HOH
132
4
HOH
HOH
309
H
HOH
38
4
HOH
HOH
310
H
HOH
122
4
HOH
HOH
311
H
HOH
68
4
HOH
HOH
312
H
HOH
96
4
HOH
HOH
313
H
HOH
290
4
HOH
HOH
314
H
HOH
165
4
HOH
HOH
315
H
HOH
102
4
HOH
HOH
316
H
HOH
31
4
HOH
HOH
317
H
HOH
266
4
HOH
HOH
318
H
HOH
192
4
HOH
HOH
319
H
HOH
78
4
HOH
HOH
320
H
HOH
282
4
HOH
HOH
321
H
HOH
7
4
HOH
HOH
322
H
HOH
56
4
HOH
HOH
323
H
HOH
70
4
HOH
HOH
324
H
HOH
47
4
HOH
HOH
325
H
HOH
181
4
HOH
HOH
326
H
HOH
219
4
HOH
HOH
327
H
HOH
103
4
HOH
HOH
328
H
HOH
328
4
HOH
HOH
329
H
HOH
211
4
HOH
HOH
330
H
HOH
4
4
HOH
HOH
331
H
HOH
95
4
HOH
HOH
332
H
HOH
276
4
HOH
HOH
333
H
HOH
23
4
HOH
HOH
334
H
HOH
11
4
HOH
HOH
335
H
HOH
197
4
HOH
HOH
336
H
HOH
16
4
HOH
HOH
337
H
HOH
12
4
HOH
HOH
338
H
HOH
24
4
HOH
HOH
339
H
HOH
72
4
HOH
HOH
340
H
HOH
45
4
HOH
HOH
341
H
HOH
25
4
HOH
HOH
342
H
HOH
147
4
HOH
HOH
343
H
HOH
136
4
HOH
HOH
344
H
HOH
202
4
HOH
HOH
345
H
HOH
111
4
HOH
HOH
346
H
HOH
196
4
HOH
HOH
347
H
HOH
100
4
HOH
HOH
348
H
HOH
200
4
HOH
HOH
349
H
HOH
48
4
HOH
HOH
350
H
HOH
142
4
HOH
HOH
351
H
HOH
108
4
HOH
HOH
352
H
HOH
178
4
HOH
HOH
353
H
HOH
157
4
HOH
HOH
354
H
HOH
82
4
HOH
HOH
355
H
HOH
254
4
HOH
HOH
356
H
HOH
215
4
HOH
HOH
357
H
HOH
91
4
HOH
HOH
358
H
HOH
76
4
HOH
HOH
359
H
HOH
83
4
HOH
HOH
360
H
HOH
182
4
HOH
HOH
361
H
HOH
128
4
HOH
HOH
362
H
HOH
121
4
HOH
HOH
363
H
HOH
253
4
HOH
HOH
364
H
HOH
152
4
HOH
HOH
365
H
HOH
81
4
HOH
HOH
366
H
HOH
41
4
HOH
HOH
367
H
HOH
115
4
HOH
HOH
368
H
HOH
179
4
HOH
HOH
369
H
HOH
63
4
HOH
HOH
370
H
HOH
307
4
HOH
HOH
371
H
HOH
118
4
HOH
HOH
372
H
HOH
175
4
HOH
HOH
373
H
HOH
21
4
HOH
HOH
374
H
HOH
14
4
HOH
HOH
375
H
HOH
69
4
HOH
HOH
376
H
HOH
110
4
HOH
HOH
377
H
HOH
20
4
HOH
HOH
378
H
HOH
50
4
HOH
HOH
379
H
HOH
148
4
HOH
HOH
380
H
HOH
177
4
HOH
HOH
381
H
HOH
278
4
HOH
HOH
382
H
HOH
86
4
HOH
HOH
383
H
HOH
153
4
HOH
HOH
384
H
HOH
57
4
HOH
HOH
385
H
HOH
193
4
HOH
HOH
386
H
HOH
141
4
HOH
HOH
387
H
HOH
235
4
HOH
HOH
388
H
HOH
293
4
HOH
HOH
389
H
HOH
87
4
HOH
HOH
390
H
HOH
292
4
HOH
HOH
391
H
HOH
187
4
HOH
HOH
392
H
HOH
167
4
HOH
HOH
393
H
HOH
161
4
HOH
HOH
394
H
HOH
194
4
HOH
HOH
395
H
HOH
6
4
HOH
HOH
396
H
HOH
322
4
HOH
HOH
397
H
HOH
133
4
HOH
HOH
398
H
HOH
85
4
HOH
HOH
399
H
HOH
84
4
HOH
HOH
400
H
HOH
154
4
HOH
HOH
401
H
HOH
120
4
HOH
HOH
402
H
HOH
127
4
HOH
HOH
403
H
HOH
13
4
HOH
HOH
404
H
HOH
286
4
HOH
HOH
405
H
HOH
313
4
HOH
HOH
406
H
HOH
269
4
HOH
HOH
407
H
HOH
284
4
HOH
HOH
408
H
HOH
244
4
HOH
HOH
409
H
HOH
131
4
HOH
HOH
410
H
HOH
296
4
HOH
HOH
411
H
HOH
92
4
HOH
HOH
412
H
HOH
107
4
HOH
HOH
413
H
HOH
317
4
HOH
HOH
414
H
HOH
65
4
HOH
HOH
415
H
HOH
183
4
HOH
HOH
416
H
HOH
271
4
HOH
HOH
417
H
HOH
206
4
HOH
HOH
418
H
HOH
277
4
HOH
HOH
419
H
HOH
170
4
HOH
HOH
420
H
HOH
283
4
HOH
HOH
421
H
HOH
213
4
HOH
HOH
422
H
HOH
252
4
HOH
HOH
423
H
HOH
218
4
HOH
HOH
424
H
HOH
331
4
HOH
HOH
425
H
HOH
93
4
HOH
HOH
426
H
HOH
294
4
HOH
HOH
427
H
HOH
173
4
HOH
HOH
428
H
HOH
299
4
HOH
HOH
429
H
HOH
169
4
HOH
HOH
430
H
HOH
116
4
HOH
HOH
431
H
HOH
226
4
HOH
HOH
432
H
HOH
189
4
HOH
HOH
433
H
HOH
32
4
HOH
HOH
434
H
HOH
270
4
HOH
HOH
435
H
HOH
241
4
HOH
HOH
436
H
HOH
238
4
HOH
HOH
437
H
HOH
214
4
HOH
HOH
438
H
HOH
306
4
HOH
HOH
439
H
HOH
117
4
HOH
HOH
440
H
HOH
274
4
HOH
HOH
441
H
HOH
265
4
HOH
HOH
442
H
HOH
135
4
HOH
HOH
443
H
HOH
273
4
HOH
HOH
444
H
HOH
288
4
HOH
HOH
445
H
HOH
305
4
HOH
HOH
446
H
HOH
309
4
HOH
HOH
447
H
HOH
312
4
HOH
HOH
448
H
HOH
297
4
HOH
HOH
449
H
HOH
246
4
HOH
HOH
450
H
HOH
164
4
HOH
HOH
451
H
HOH
228
4
HOH
HOH
452
H
HOH
208
4
HOH
HOH
453
H
HOH
315
4
HOH
HOH
454
H
HOH
320
4
HOH
HOH
455
H
HOH
302
4
HOH
HOH
456
H
HOH
201
4
HOH
HOH
457
H
HOH
113
4
HOH
HOH
458
H
HOH
234
4
HOH
HOH
459
H
HOH
257
4
HOH
HOH
460
H
HOH
207
4
HOH
HOH
461
H
HOH
300
4
HOH
HOH
462
H
HOH
308
4
HOH
HOH
463
H
HOH
255
4
HOH
HOH
464
H
HOH
329
4
HOH
HOH
465
H
HOH
316
4
HOH
HOH
466
H
HOH
243
4
HOH
HOH
467
H
HOH
222
4
HOH
HOH
401
L
HOH
311
4
HOH
HOH
402
L
HOH
263
4
HOH
HOH
403
L
HOH
280
4
HOH
HOH
404
L
HOH
97
4
HOH
HOH
405
L
HOH
285
4
HOH
HOH
406
L
HOH
281
4
HOH
HOH
407
L
HOH
15
4
HOH
HOH
408
L
HOH
261
4
HOH
HOH
409
L
HOH
139
4
HOH
HOH
410
L
HOH
126
4
HOH
HOH
411
L
HOH
44
4
HOH
HOH
412
L
HOH
143
4
HOH
HOH
413
L
HOH
134
4
HOH
HOH
414
L
HOH
5
4
HOH
HOH
415
L
HOH
124
4
HOH
HOH
416
L
HOH
89
4
HOH
HOH
417
L
HOH
1
4
HOH
HOH
418
L
HOH
29
4
HOH
HOH
419
L
HOH
3
4
HOH
HOH
420
L
HOH
26
4
HOH
HOH
421
L
HOH
2
4
HOH
HOH
422
L
HOH
17
4
HOH
HOH
423
L
HOH
10
4
HOH
HOH
424
L
HOH
303
4
HOH
HOH
425
L
HOH
227
4
HOH
HOH
426
L
HOH
272
4
HOH
HOH
427
L
HOH
73
4
HOH
HOH
428
L
HOH
260
4
HOH
HOH
429
L
HOH
59
4
HOH
HOH
430
L
HOH
217
4
HOH
HOH
431
L
HOH
19
4
HOH
HOH
432
L
HOH
106
4
HOH
HOH
433
L
HOH
267
4
HOH
HOH
434
L
HOH
30
4
HOH
HOH
435
L
HOH
232
4
HOH
HOH
436
L
HOH
144
4
HOH
HOH
437
L
HOH
18
4
HOH
HOH
438
L
HOH
46
4
HOH
HOH
439
L
HOH
42
4
HOH
HOH
440
L
HOH
8
4
HOH
HOH
441
L
HOH
35
4
HOH
HOH
442
L
HOH
79
4
HOH
HOH
443
L
HOH
220
4
HOH
HOH
444
L
HOH
36
4
HOH
HOH
445
L
HOH
37
4
HOH
HOH
446
L
HOH
168
4
HOH
HOH
447
L
HOH
125
4
HOH
HOH
448
L
HOH
75
4
HOH
HOH
449
L
HOH
80
4
HOH
HOH
450
L
HOH
98
4
HOH
HOH
451
L
HOH
130
4
HOH
HOH
452
L
HOH
55
4
HOH
HOH
453
L
HOH
74
4
HOH
HOH
454
L
HOH
158
4
HOH
HOH
455
L
HOH
236
4
HOH
HOH
456
L
HOH
9
4
HOH
HOH
457
L
HOH
52
4
HOH
HOH
458
L
HOH
149
4
HOH
HOH
459
L
HOH
129
4
HOH
HOH
460
L
HOH
268
4
HOH
HOH
461
L
HOH
105
4
HOH
HOH
462
L
HOH
221
4
HOH
HOH
463
L
HOH
146
4
HOH
HOH
464
L
HOH
71
4
HOH
HOH
465
L
HOH
279
4
HOH
HOH
466
L
HOH
62
4
HOH
HOH
467
L
HOH
77
4
HOH
HOH
468
L
HOH
66
4
HOH
HOH
469
L
HOH
171
4
HOH
HOH
470
L
HOH
172
4
HOH
HOH
471
L
HOH
176
4
HOH
HOH
472
L
HOH
155
4
HOH
HOH
473
L
HOH
67
4
HOH
HOH
474
L
HOH
186
4
HOH
HOH
475
L
HOH
162
4
HOH
HOH
476
L
HOH
51
4
HOH
HOH
477
L
HOH
138
4
HOH
HOH
478
L
HOH
174
4
HOH
HOH
479
L
HOH
203
4
HOH
HOH
480
L
HOH
99
4
HOH
HOH
481
L
HOH
195
4
HOH
HOH
482
L
HOH
240
4
HOH
HOH
483
L
HOH
242
4
HOH
HOH
484
L
HOH
49
4
HOH
HOH
485
L
HOH
43
4
HOH
HOH
486
L
HOH
239
4
HOH
HOH
487
L
HOH
156
4
HOH
HOH
488
L
HOH
33
4
HOH
HOH
489
L
HOH
185
4
HOH
HOH
490
L
HOH
101
4
HOH
HOH
491
L
HOH
212
4
HOH
HOH
492
L
HOH
145
4
HOH
HOH
493
L
HOH
327
4
HOH
HOH
494
L
HOH
58
4
HOH
HOH
495
L
HOH
259
4
HOH
HOH
496
L
HOH
53
4
HOH
HOH
497
L
HOH
22
4
HOH
HOH
498
L
HOH
304
4
HOH
HOH
499
L
HOH
27
4
HOH
HOH
500
L
HOH
64
4
HOH
HOH
501
L
HOH
114
4
HOH
HOH
502
L
HOH
88
4
HOH
HOH
503
L
HOH
28
4
HOH
HOH
504
L
HOH
150
4
HOH
HOH
505
L
HOH
140
4
HOH
HOH
506
L
HOH
249
4
HOH
HOH
507
L
HOH
163
4
HOH
HOH
508
L
HOH
248
4
HOH
HOH
509
L
HOH
94
4
HOH
HOH
510
L
HOH
34
4
HOH
HOH
511
L
HOH
233
4
HOH
HOH
512
L
HOH
210
4
HOH
HOH
513
L
HOH
225
4
HOH
HOH
514
L
HOH
287
4
HOH
HOH
515
L
HOH
237
4
HOH
HOH
516
L
HOH
264
4
HOH
HOH
517
L
HOH
256
4
HOH
HOH
518
L
HOH
250
4
HOH
HOH
519
L
HOH
60
4
HOH
HOH
520
L
HOH
109
4
HOH
HOH
521
L
HOH
251
4
HOH
HOH
522
L
HOH
291
4
HOH
HOH
523
L
HOH
160
4
HOH
HOH
524
L
HOH
209
4
HOH
HOH
525
L
HOH
298
4
HOH
HOH
526
L
HOH
199
4
HOH
HOH
527
L
HOH
262
4
HOH
HOH
528
L
HOH
137
4
HOH
HOH
529
L
HOH
275
4
HOH
HOH
530
L
HOH
314
4
HOH
HOH
531
L
HOH
54
4
HOH
HOH
532
L
HOH
258
4
HOH
HOH
533
L
HOH
231
4
HOH
HOH
534
L
HOH
205
4
HOH
HOH
535
L
HOH
245
4
HOH
HOH
536
L
HOH
318
4
HOH
HOH
537
L
HOH
326
4
HOH
HOH
538
L
HOH
324
4
HOH
HOH
539
L
HOH
295
4
HOH
HOH
540
L
HOH
289
4
HOH
HOH
541
L
HOH
321
4
HOH
HOH
542
L
HOH
180
4
HOH
HOH
543
L
HOH
39
4
HOH
HOH
544
L
HOH
230
4
HOH
HOH
545
L
HOH
332
4
HOH
HOH
546
L
HOH
61
4
HOH
HOH
547
L
HOH
330
4
HOH
HOH
548
L
HOH
119
4
HOH
HOH
549
L
HOH
223
4
HOH
HOH
550
L
HOH
188
4
HOH
HOH
551
L
HOH
333
4
HOH
HOH
552
L
HOH
310
4
HOH
HOH
553
L
HOH
325
4
HOH
HOH
554
L
HOH
224
4
HOH
HOH
555
L
HOH
198
4
HOH
HOH
556
L
HOH
184
4
HOH
HOH
557
L
HOH
151
4
HOH
HOH
558
L
HOH
216
4
HOH
HOH
559
L
HOH
159
4
HOH
HOH
560
L
HOH
190
4
HOH
HOH
561
L
HOH
319
4
HOH
HOH
562
L
HOH
204
4
HOH
HOH
563
L
HOH
323
4
HOH
HOH
564
L
HOH
229
4
HOH
HOH
565
L
HOH
166
4
HOH
HOH
566
L
n
1
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
GLY
9
n
9
GLY
9
H
GLY
10
n
10
GLY
10
H
VAL
11
n
11
VAL
11
H
VAL
12
n
12
VAL
12
H
GLN
13
n
13
GLN
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
THR
16
n
16
THR
16
H
SER
17
n
17
SER
17
H
LEU
18
n
18
LEU
18
H
ARG
19
n
19
ARG
19
H
LEU
20
n
20
LEU
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
ALA
23
n
23
ALA
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLN
26
n
26
GLN
26
H
PHE
27
n
27
PHE
27
H
ARG
28
n
28
ARG
28
H
PHE
29
n
29
PHE
29
H
ASP
30
n
30
ASP
30
H
GLY
31
n
31
GLY
31
H
TYR
32
n
32
TYR
32
H
GLY
33
n
33
GLY
33
H
MET
34
n
34
MET
34
H
HIS
35
n
35
HIS
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
ARG
38
n
38
ARG
38
H
GLN
39
n
39
GLN
39
H
ALA
40
n
40
ALA
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
LYS
43
n
43
LYS
43
H
GLY
44
n
44
GLY
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
VAL
48
n
48
VAL
48
H
ALA
49
n
49
ALA
49
H
SER
50
n
50
SER
50
H
ILE
51
n
51
ILE
51
H
SER
52
n
52
SER
52
H
HIS
52
n
53
A
HIS
52
H
ASP
53
n
54
ASP
53
H
GLY
54
n
55
GLY
54
H
ILE
55
n
56
ILE
55
H
LYS
56
n
57
LYS
56
H
LYS
57
n
58
LYS
57
H
TYR
58
n
59
TYR
58
H
HIS
59
n
60
HIS
59
H
ALA
60
n
61
ALA
60
H
GLU
61
n
62
GLU
61
H
LYS
62
n
63
LYS
62
H
VAL
63
n
64
VAL
63
H
TRP
64
n
65
TRP
64
H
GLY
65
n
66
GLY
65
H
ARG
66
n
67
ARG
66
H
PHE
67
n
68
PHE
67
H
THR
68
n
69
THR
68
H
ILE
69
n
70
ILE
69
H
SER
70
n
71
SER
70
H
ARG
71
n
72
ARG
71
H
ASP
72
n
73
ASP
72
H
ASN
73
n
74
ASN
73
H
SER
74
n
75
SER
74
H
LYS
75
n
76
LYS
75
H
ASN
76
n
77
ASN
76
H
THR
77
n
78
THR
77
H
LEU
78
n
79
LEU
78
H
TYR
79
n
80
TYR
79
H
LEU
80
n
81
LEU
80
H
GLN
81
n
82
GLN
81
H
MET
82
n
83
MET
82
H
ASN
82
n
84
A
ASN
82
H
SER
82
n
85
B
SER
82
H
LEU
82
n
86
C
LEU
82
H
ARG
83
n
87
ARG
83
H
PRO
84
n
88
PRO
84
H
GLU
85
n
89
GLU
85
H
ASP
86
n
90
ASP
86
H
THR
87
n
91
THR
87
H
ALA
88
n
92
ALA
88
H
LEU
89
n
93
LEU
89
H
TYR
90
n
94
TYR
90
H
TYR
91
n
95
TYR
91
H
CYS
92
n
96
CYS
92
H
ALA
93
n
97
ALA
93
H
LYS
94
n
98
LYS
94
H
ASP
95
n
99
ASP
95
H
LEU
96
n
100
LEU
96
H
ARG
97
n
101
ARG
97
H
GLU
98
n
102
GLU
98
H
ASP
99
n
103
ASP
99
H
GLU
100
n
104
GLU
100
H
CYS
100
n
105
A
CYS
100
H
GLU
100
n
106
B
GLU
100
H
GLU
100
n
107
C
GLU
100
H
TRP
100
n
108
D
TRP
100
H
TRP
100
n
109
E
TRP
100
H
SER
100
n
110
F
SER
100
H
ASP
100
n
111
G
ASP
100
H
TYS
100
n
112
H
TYS
100
H
TYS
100
n
113
I
TYS
100
H
ASP
100
n
114
J
ASP
100
H
PHE
100
n
115
K
PHE
100
H
GLY
100
n
116
L
GLY
100
H
LYS
100
n
117
M
LYS
100
H
GLN
100
n
118
N
GLN
100
H
LEU
100
n
119
O
LEU
100
H
PRO
100
n
120
P
PRO
100
H
CYS
100
n
121
Q
CYS
100
H
ALA
100
n
122
R
ALA
100
H
LYS
100
n
123
S
LYS
100
H
SER
100
n
124
T
SER
100
H
ARG
100
n
125
U
ARG
100
H
GLY
100
n
126
V
GLY
100
H
GLY
100
n
127
W
GLY
100
H
LEU
100
n
128
X
LEU
100
H
VAL
100
n
129
Y
VAL
100
H
GLY
100
n
130
Z
GLY
100
H
ILE
101
n
131
ILE
101
H
ALA
101
n
132
A
ALA
101
H
ASP
101
n
133
B
ASP
101
H
ASN
102
n
134
ASN
102
H
TRP
103
n
135
TRP
103
H
GLY
104
n
136
GLY
104
H
GLN
105
n
137
GLN
105
H
GLY
106
n
138
GLY
106
H
THR
107
n
139
THR
107
H
MET
108
n
140
MET
108
H
VAL
109
n
141
VAL
109
H
THR
110
n
142
THR
110
H
VAL
111
n
143
VAL
111
H
SER
112
n
144
SER
112
H
SER
113
n
145
SER
113
H
ALA
114
n
146
ALA
114
H
SER
115
n
147
SER
115
H
THR
116
n
148
THR
116
H
LYS
117
n
149
LYS
117
H
GLY
118
n
150
GLY
118
H
PRO
119
n
151
PRO
119
H
SER
120
n
152
SER
120
H
VAL
121
n
153
VAL
121
H
PHE
122
n
154
PHE
122
H
PRO
123
n
155
PRO
123
H
LEU
124
n
156
LEU
124
H
ALA
125
n
157
ALA
125
H
PRO
126
n
158
PRO
126
H
SER
127
n
159
SER
127
H
SER
128
n
160
SER
128
H
LYS
129
n
161
LYS
129
H
SER
130
n
162
SER
130
H
THR
131
n
163
THR
131
H
SER
132
n
164
SER
132
H
GLY
133
n
165
GLY
133
H
GLY
134
n
166
GLY
134
H
THR
135
n
167
THR
135
H
ALA
136
n
168
ALA
136
H
ALA
137
n
169
ALA
137
H
LEU
138
n
170
LEU
138
H
GLY
139
n
171
GLY
139
H
CYS
140
n
172
CYS
140
H
LEU
141
n
173
LEU
141
H
VAL
142
n
174
VAL
142
H
LYS
143
n
175
LYS
143
H
ASP
144
n
176
ASP
144
H
TYR
145
n
177
TYR
145
H
PHE
146
n
178
PHE
146
H
PRO
147
n
179
PRO
147
H
GLU
148
n
180
GLU
148
H
PRO
149
n
181
PRO
149
H
VAL
150
n
182
VAL
150
H
THR
151
n
183
THR
151
H
VAL
152
n
184
VAL
152
H
SER
153
n
185
SER
153
H
TRP
154
n
186
TRP
154
H
ASN
155
n
187
ASN
155
H
SER
156
n
188
SER
156
H
GLY
157
n
189
GLY
157
H
ALA
158
n
190
ALA
158
H
LEU
159
n
191
LEU
159
H
THR
160
n
192
THR
160
H
SER
161
n
193
SER
161
H
GLY
162
n
194
GLY
162
H
VAL
163
n
195
VAL
163
H
HIS
164
n
196
HIS
164
H
THR
165
n
197
THR
165
H
PHE
166
n
198
PHE
166
H
PRO
167
n
199
PRO
167
H
ALA
168
n
200
ALA
168
H
VAL
169
n
201
VAL
169
H
LEU
170
n
202
LEU
170
H
GLN
171
n
203
GLN
171
H
SER
172
n
204
SER
172
H
SER
173
n
205
SER
173
H
GLY
174
n
206
GLY
174
H
LEU
175
n
207
LEU
175
H
TYR
176
n
208
TYR
176
H
SER
177
n
209
SER
177
H
LEU
178
n
210
LEU
178
H
SER
179
n
211
SER
179
H
SER
180
n
212
SER
180
H
VAL
181
n
213
VAL
181
H
VAL
182
n
214
VAL
182
H
THR
183
n
215
THR
183
H
VAL
184
n
216
VAL
184
H
PRO
185
n
217
PRO
185
H
SER
186
n
218
SER
186
H
SER
187
n
219
SER
187
H
SER
188
n
220
SER
188
H
LEU
189
n
221
LEU
189
H
GLY
190
n
222
GLY
190
H
THR
191
n
223
THR
191
H
GLN
192
n
224
GLN
192
H
THR
193
n
225
THR
193
H
TYR
194
n
226
TYR
194
H
ILE
195
n
227
ILE
195
H
CYS
196
n
228
CYS
196
H
ASN
197
n
229
ASN
197
H
VAL
198
n
230
VAL
198
H
ASN
199
n
231
ASN
199
H
HIS
200
n
232
HIS
200
H
LYS
201
n
233
LYS
201
H
PRO
202
n
234
PRO
202
H
SER
203
n
235
SER
203
H
ASN
204
n
236
ASN
204
H
THR
205
n
237
THR
205
H
LYS
206
n
238
LYS
206
H
VAL
207
n
239
VAL
207
H
ASP
208
n
240
ASP
208
H
LYS
209
n
241
LYS
209
H
ARG
210
n
242
ARG
210
H
VAL
211
n
243
VAL
211
H
GLU
212
n
244
GLU
212
H
PRO
213
n
245
PRO
213
H
LYS
214
n
246
LYS
214
H
n
247
215
H
n
248
216
H
n
249
217
H
n
250
218
H
n
251
219
H
n
252
220
H
n
253
221
H
n
254
222
H
n
255
223
H
n
256
224
H
n
257
225
H
GLN
1
n
1
GLN
1
L
SER
2
n
2
SER
2
L
VAL
3
n
3
VAL
3
L
LEU
4
n
4
LEU
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
PRO
7
n
7
PRO
7
L
PRO
8
n
8
PRO
8
L
SER
9
n
9
SER
9
L
VAL
11
n
10
VAL
11
L
SER
12
n
11
SER
12
L
ALA
13
n
12
ALA
13
L
ALA
14
n
13
ALA
14
L
PRO
15
n
14
PRO
15
L
GLY
16
n
15
GLY
16
L
GLN
17
n
16
GLN
17
L
LYS
18
n
17
LYS
18
L
VAL
19
n
18
VAL
19
L
THR
20
n
19
THR
20
L
ILE
21
n
20
ILE
21
L
SER
22
n
21
SER
22
L
CYS
23
n
22
CYS
23
L
SER
24
n
23
SER
24
L
GLY
25
n
24
GLY
25
L
ASN
26
n
25
ASN
26
L
THR
27
n
26
THR
27
L
SER
27
n
27
A
SER
27
L
ASN
27
n
28
B
ASN
27
L
ILE
28
n
29
ILE
28
L
GLY
29
n
30
GLY
29
L
ASN
30
n
31
ASN
30
L
ASN
31
n
32
ASN
31
L
PHE
32
n
33
PHE
32
L
VAL
33
n
34
VAL
33
L
SER
34
n
35
SER
34
L
TRP
35
n
36
TRP
35
L
TYR
36
n
37
TYR
36
L
GLN
37
n
38
GLN
37
L
GLN
38
n
39
GLN
38
L
ARG
39
n
40
ARG
39
L
PRO
40
n
41
PRO
40
L
GLY
41
n
42
GLY
41
L
ARG
42
n
43
ARG
42
L
ALA
43
n
44
ALA
43
L
PRO
44
n
45
PRO
44
L
GLN
45
n
46
GLN
45
L
LEU
46
n
47
LEU
46
L
LEU
47
n
48
LEU
47
L
ILE
48
n
49
ILE
48
L
TYR
49
n
50
TYR
49
L
GLU
50
n
51
GLU
50
L
THR
51
n
52
THR
51
L
ASP
52
n
53
ASP
52
L
LYS
53
n
54
LYS
53
L
ARG
54
n
55
ARG
54
L
PRO
55
n
56
PRO
55
L
SER
56
n
57
SER
56
L
GLY
57
n
58
GLY
57
L
ILE
58
n
59
ILE
58
L
PRO
59
n
60
PRO
59
L
ASP
60
n
61
ASP
60
L
ARG
61
n
62
ARG
61
L
PHE
62
n
63
PHE
62
L
SER
63
n
64
SER
63
L
ALA
64
n
65
ALA
64
L
SER
65
n
66
SER
65
L
LYS
66
n
67
LYS
66
L
SER
67
n
68
SER
67
L
GLY
68
n
69
GLY
68
L
THR
69
n
70
THR
69
L
SER
70
n
71
SER
70
L
GLY
71
n
72
GLY
71
L
THR
72
n
73
THR
72
L
LEU
73
n
74
LEU
73
L
ALA
74
n
75
ALA
74
L
ILE
75
n
76
ILE
75
L
THR
76
n
77
THR
76
L
GLY
77
n
78
GLY
77
L
LEU
78
n
79
LEU
78
L
GLN
79
n
80
GLN
79
L
THR
80
n
81
THR
80
L
GLY
81
n
82
GLY
81
L
ASP
82
n
83
ASP
82
L
GLU
83
n
84
GLU
83
L
ALA
84
n
85
ALA
84
L
ASP
85
n
86
ASP
85
L
TYR
86
n
87
TYR
86
L
TYR
87
n
88
TYR
87
L
CYS
88
n
89
CYS
88
L
ALA
89
n
90
ALA
89
L
THR
90
n
91
THR
90
L
TRP
91
n
92
TRP
91
L
ALA
92
n
93
ALA
92
L
ALA
93
n
94
ALA
93
L
SER
94
n
95
SER
94
L
LEU
95
n
96
LEU
95
L
SER
95
n
97
A
SER
95
L
SER
95
n
98
B
SER
95
L
ALA
95
n
99
C
ALA
95
L
ARG
96
n
100
ARG
96
L
VAL
97
n
101
VAL
97
L
PHE
98
n
102
PHE
98
L
GLY
99
n
103
GLY
99
L
THR
100
n
104
THR
100
L
GLY
101
n
105
GLY
101
L
THR
102
n
106
THR
102
L
LYS
103
n
107
LYS
103
L
VAL
104
n
108
VAL
104
L
ILE
105
n
109
ILE
105
L
VAL
106
n
110
VAL
106
L
LEU
106
n
111
A
LEU
106
L
VAL
107
n
112
VAL
107
L
GLN
108
n
113
GLN
108
L
PRO
109
n
114
PRO
109
L
LYS
110
n
115
LYS
110
L
ALA
111
n
116
ALA
111
L
ASN
112
n
117
ASN
112
L
PRO
113
n
118
PRO
113
L
THR
114
n
119
THR
114
L
VAL
115
n
120
VAL
115
L
THR
116
n
121
THR
116
L
LEU
117
n
122
LEU
117
L
PHE
118
n
123
PHE
118
L
PRO
119
n
124
PRO
119
L
PRO
120
n
125
PRO
120
L
SER
121
n
126
SER
121
L
SER
122
n
127
SER
122
L
GLU
123
n
128
GLU
123
L
GLU
124
n
129
GLU
124
L
LEU
125
n
130
LEU
125
L
GLN
126
n
131
GLN
126
L
ALA
127
n
132
ALA
127
L
ASN
128
n
133
ASN
128
L
LYS
129
n
134
LYS
129
L
ALA
130
n
135
ALA
130
L
THR
131
n
136
THR
131
L
LEU
132
n
137
LEU
132
L
VAL
133
n
138
VAL
133
L
CYS
134
n
139
CYS
134
L
LEU
135
n
140
LEU
135
L
ILE
136
n
141
ILE
136
L
SER
137
n
142
SER
137
L
ASP
138
n
143
ASP
138
L
PHE
139
n
144
PHE
139
L
TYR
140
n
145
TYR
140
L
PRO
141
n
146
PRO
141
L
GLY
142
n
147
GLY
142
L
ALA
143
n
148
ALA
143
L
VAL
144
n
149
VAL
144
L
THR
145
n
150
THR
145
L
VAL
146
n
151
VAL
146
L
ALA
147
n
152
ALA
147
L
TRP
148
n
153
TRP
148
L
LYS
149
n
154
LYS
149
L
ALA
150
n
155
ALA
150
L
ASP
151
n
156
ASP
151
L
SER
152
n
157
SER
152
L
SER
153
n
158
SER
153
L
PRO
154
n
159
PRO
154
L
VAL
155
n
160
VAL
155
L
LYS
156
n
161
LYS
156
L
ALA
157
n
162
ALA
157
L
GLY
158
n
163
GLY
158
L
VAL
159
n
164
VAL
159
L
GLU
160
n
165
GLU
160
L
THR
161
n
166
THR
161
L
THR
162
n
167
THR
162
L
THR
163
n
168
THR
163
L
PRO
164
n
169
PRO
164
L
SER
165
n
170
SER
165
L
LYS
166
n
171
LYS
166
L
GLN
167
n
172
GLN
167
L
SER
168
n
173
SER
168
L
ASN
169
n
174
ASN
169
L
ASN
170
n
175
ASN
170
L
LYS
171
n
176
LYS
171
L
TYR
172
n
177
TYR
172
L
ALA
173
n
178
ALA
173
L
ALA
174
n
179
ALA
174
L
SER
175
n
180
SER
175
L
SER
176
n
181
SER
176
L
TYR
177
n
182
TYR
177
L
LEU
178
n
183
LEU
178
L
SER
179
n
184
SER
179
L
LEU
180
n
185
LEU
180
L
THR
181
n
186
THR
181
L
PRO
182
n
187
PRO
182
L
GLU
183
n
188
GLU
183
L
GLN
184
n
189
GLN
184
L
TRP
185
n
190
TRP
185
L
LYS
186
n
191
LYS
186
L
SER
187
n
192
SER
187
L
HIS
188
n
193
HIS
188
L
ARG
189
n
194
ARG
189
L
SER
190
n
195
SER
190
L
TYR
191
n
196
TYR
191
L
SER
192
n
197
SER
192
L
CYS
193
n
198
CYS
193
L
GLN
194
n
199
GLN
194
L
VAL
195
n
200
VAL
195
L
THR
196
n
201
THR
196
L
HIS
197
n
202
HIS
197
L
GLU
198
n
203
GLU
198
L
GLY
199
n
204
GLY
199
L
SER
200
n
205
SER
200
L
THR
201
n
206
THR
201
L
VAL
202
n
207
VAL
202
L
GLU
203
n
208
GLU
203
L
LYS
204
n
209
LYS
204
L
THR
205
n
210
THR
205
L
VAL
206
n
211
VAL
206
L
ALA
207
n
212
ALA
207
L
PRO
208
n
213
PRO
208
L
THR
209
n
214
THR
209
L
GLU
210
n
215
GLU
210
L
n
216
211
L
n
217
212
L
4.3090
1.1641
-1.4741
1.2732
-0.4178
1.2930
-0.0343
-0.0607
-0.0411
-0.0698
0.0293
-0.1122
-0.0602
0.0733
0.0145
0.1562
0.0208
-0.0222
0.1160
0.0027
0.1077
refined
22.1988
-21.3353
-32.7523
X-RAY DIFFRACTION
4.1550
-1.0113
-0.6701
3.3294
-0.5641
7.1855
-0.1862
-0.3314
-0.0263
0.3565
0.1323
0.1615
-0.2752
-0.0003
0.0364
0.1974
0.0066
-0.0399
0.1738
0.0079
0.1820
refined
-20.8442
-13.8330
-23.7750
X-RAY DIFFRACTION
3.0583
-1.6440
-1.6083
3.2198
1.6288
3.4662
0.0190
-0.1159
0.0614
0.0976
0.0622
-0.1174
0.0453
0.2426
-0.0666
0.1500
-0.0299
-0.0339
0.1579
0.0121
0.1166
refined
16.9765
-15.4095
-11.6996
X-RAY DIFFRACTION
3.1564
3.1751
1.2691
5.7524
1.5207
2.7593
0.0053
-0.0505
-0.0442
0.0369
0.0274
0.0534
0.0787
-0.0063
-0.0023
0.0948
0.0486
-0.0182
0.1169
0.0067
0.1534
refined
-12.5407
-20.8981
-11.8407
X-RAY DIFFRACTION
H
0
H
0
X-RAY DIFFRACTION
1
chain 'H' and (resid 2 through 114 )
H
0
H
0
X-RAY DIFFRACTION
2
chain 'H' and (resid 115 through 214 )
L
0
L
0
X-RAY DIFFRACTION
3
chain 'L' and (resid 2 through 107 )
L
0
L
0
X-RAY DIFFRACTION
4
chain 'L' and (resid 108 through 210 )
author_and_software_defined_assembly
PISA
2
dimeric
4150
-17
22010
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
H
N
SER
7
A
N
SER
7
H
O
SER
21
A
O
SER
21
H
N
LEU
18
A
N
LEU
18
H
O
MET
82
A
O
MET
83
H
O
TYR
79
A
O
TYR
80
H
N
SER
70
A
N
SER
71
H
N
VAL
12
A
N
VAL
12
H
O
THR
110
A
O
THR
142
H
O
THR
107
A
O
THR
139
H
N
TYR
90
A
N
TYR
94
H
O
TYR
91
A
O
TYR
95
H
N
VAL
37
A
N
VAL
37
H
N
TRP
36
A
N
TRP
36
H
O
ALA
49
A
O
ALA
49
H
N
SER
50
A
N
SER
50
H
O
TYR
58
A
O
TYR
59
H
N
VAL
12
A
N
VAL
12
H
O
THR
110
A
O
THR
142
H
O
THR
107
A
O
THR
139
H
N
TYR
90
A
N
TYR
94
H
N
LYS
94
A
N
LYS
98
H
O
ASN
102
A
O
ASN
134
B
H
N
GLU
100
A
N
GLU
106
S
H
O
LYS
100
A
O
LYS
123
H
N
SER
120
A
N
SER
152
H
O
LYS
143
A
O
LYS
175
H
N
ALA
136
A
N
ALA
168
H
O
VAL
184
A
O
VAL
216
H
O
VAL
181
A
O
VAL
213
H
N
HIS
164
A
N
HIS
196
H
N
SER
132
A
N
SER
164
H
O
THR
135
A
O
THR
167
H
N
ALA
136
A
N
ALA
168
H
O
VAL
184
A
O
VAL
216
H
O
SER
177
A
O
SER
209
H
N
VAL
169
A
N
VAL
201
H
N
SER
153
A
N
SER
185
H
O
ASN
197
A
O
ASN
229
H
N
VAL
198
A
N
VAL
230
H
O
VAL
207
A
O
VAL
239
L
N
VAL
11
B
N
VAL
10
L
O
LYS
103
B
O
LYS
107
L
O
VAL
104
B
O
VAL
108
L
N
ALA
84
B
N
ALA
85
L
O
ASP
85
B
O
ASP
86
L
N
GLN
38
B
N
GLN
39
L
N
TRP
35
B
N
TRP
36
L
O
LEU
47
B
O
LEU
48
L
N
VAL
11
B
N
VAL
10
L
O
LYS
103
B
O
LYS
107
L
O
VAL
104
B
O
VAL
108
L
N
ALA
84
B
N
ALA
85
L
N
THR
90
B
N
THR
91
L
O
VAL
97
B
O
VAL
101
L
N
CYS
23
B
N
CYS
22
L
O
GLY
71
B
O
GLY
72
L
O
ALA
74
B
O
ALA
75
L
N
SER
63
B
N
SER
64
L
N
THR
116
B
N
THR
121
L
O
LEU
135
B
O
LEU
140
L
N
CYS
134
B
N
CYS
139
L
O
SER
176
B
O
SER
181
L
O
TYR
177
B
O
TYR
182
L
N
GLU
160
B
N
GLU
165
L
N
THR
116
B
N
THR
121
L
O
LEU
135
B
O
LEU
140
L
N
CYS
134
B
N
CYS
139
L
O
SER
176
B
O
SER
181
L
O
ALA
173
B
O
ALA
178
L
N
SER
165
B
N
SER
170
L
O
SER
153
B
O
SER
158
L
N
ALA
150
B
N
ALA
155
L
N
ALA
147
B
N
ALA
152
L
O
GLN
194
B
O
GLN
199
L
N
VAL
195
B
N
VAL
200
L
O
VAL
202
B
O
VAL
207
1
H
HOH
356
D
HOH
1
L
HOH
564
E
HOH
1
H
GLN
1
A
GLN
1
1
Y
1
H
SER
215
A
SER
247
1
Y
1
H
CYS
216
A
CYS
248
1
Y
1
H
ASP
217
A
ASP
249
1
Y
1
H
LYS
218
A
LYS
250
1
Y
1
H
GLY
219
A
GLY
251
1
Y
1
H
LEU
220
A
LEU
252
1
Y
1
H
GLU
221
A
GLU
253
1
Y
1
H
VAL
222
A
VAL
254
1
Y
1
H
LEU
223
A
LEU
255
1
Y
1
H
PHE
224
A
PHE
256
1
Y
1
H
GLN
225
A
GLN
257
1
Y
1
L
CYS
211
B
CYS
216
1
Y
1
L
SER
212
B
SER
217
1
Y
1
L
L
O
O
HOH
HOH
539
555
1.99
1
L
L
O
O
HOH
HOH
530
533
1.99
1
H
H
O
O
HOH
HOH
448
455
2.07
1
H
H
O
O
HOH
HOH
389
411
2.08
1
L
L
O
O
HOH
HOH
413
475
2.08
1
H
H
O
O
HOH
HOH
416
454
2.14
1
H
H
O
O
HOH
HOH
419
447
2.16
1
H
H
O
O
HOH
HOH
463
465
2.17
1
H
LYS
43
-114.37
-169.49
1
H
ALA
88
177.37
161.42
J
1
H
ASP
100
-102.97
66.49
B
1
L
ASN
27
-100.07
-88.04
1
L
THR
51
78.80
-45.60
1
L
ASP
138
70.07
37.60
1
L
ASP
151
51.33
-111.82
1
L
THR
209
-82.76
30.57
174.030
33.7624
12.520
0.2146
0.1693
0.1716
1.9540
42.614
1684
31938
33622
5.0100
89.7800
0.2100
1
FREE R-VALUE
1.350
MOLECULAR REPLACEMENT
21.5400
0.9000
1.1100
4OD1
ML
FLAT BULK SOLVENT MODEL
1.9540
42.614
333
3889
92.28
37.25
72
0
3484
460
0.007
3617
0.889
4941
0.055
561
0.006
626
11.607
2152
0.2542
0.2450
2.0112
66
1148
1214
12
40.0000
0.2845
0.2183
2.0761
95
1873
1968
12
64.0000
0.2670
0.2073
2.1503
120
2354
2474
12
81.0000
0.2454
0.1976
2.2364
147
2711
2858
12
93.0000
0.2366
0.1780
2.3382
154
2910
3064
12
99.0000
0.2316
0.1758
2.4614
154
2931
3085
12
100.0000
0.2250
0.1688
2.6156
155
2927
3082
12
100.0000
0.1986
0.1692
2.8176
154
2960
3114
12
100.0000
0.2175
0.1740
3.1010
154
2984
3138
12
100.0000
0.1969
0.1594
3.5496
159
2971
3130
12
100.0000
0.1843
0.1433
4.4713
159
3021
3180
12
100.0000
0.2171
0.1690
42.6236
167
3148
3315
12
100.0000
24.790
1.954
42.614
5DT1
33667
0.114
0.049
0.125
1.017
1
11.969
10.200
179032
5.300
90.800
0.329
1.970
2.040
1841
0.817
0.283
0.436
1.039
1
1.600
0
50.400
0.305
2.040
2.120
2567
0.813
0.240
0.390
1.062
1
1.900
0
70.800
0.301
2.120
2.220
3226
0.852
0.212
0.371
1.061
1
2.500
0
87.800
0.316
2.220
2.340
3574
0.878
0.189
0.371
1.075
1
3.500
0
97.900
0.304
2.340
2.480
3667
0.939
0.148
0.339
1.063
1
5.000
0
99.800
0.270
2.480
2.670
3716
0.961
0.115
0.294
1.052
1
6.400
0
100.000
0.195
2.670
2.940
3669
0.984
0.078
0.210
1.025
1
7.200
0
100.000
0.134
2.940
3.370
3716
0.990
0.053
0.144
1.065
1
7.400
0
100.000
0.092
3.370
4.240
3753
0.994
0.036
0.099
0.943
1
7.300
0
100.000
0.076
4.240
50.000
3938
0.993
0.031
0.082
0.942
1
7.000
0
99.800
data scaling
HKL-2000
refinement
PHENIX
1.10_2155
data extraction
PDB_EXTRACT
3.15
data reduction
HKL-2000
phasing
PHENIX
Crystal structure of human Fab CAP256-VRC26.25, a potent V1V2-directed HIV-1 broadly neutralizing antibody
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
H
ARG
28
A
ARG
28
HELX_P
H
ASP
30
A
ASP
30
5
AA1
3
H
GLU
61
A
GLU
62
HELX_P
H
TRP
64
A
TRP
65
5
AA2
4
H
ARG
83
A
ARG
87
HELX_P
H
THR
87
A
THR
91
5
AA3
5
H
SER
156
A
SER
188
HELX_P
H
ALA
158
A
ALA
190
5
AA4
3
H
SER
187
A
SER
219
HELX_P
H
THR
191
A
THR
223
5
AA5
5
H
LYS
201
A
LYS
233
HELX_P
H
ASN
204
A
ASN
236
5
AA6
4
L
ASN
27
B
ASN
28
HELX_P
L
ASN
31
B
ASN
32
5
AA7
5
B
L
GLN
79
B
GLN
80
HELX_P
L
GLU
83
B
GLU
84
5
AA8
5
L
LEU
95
B
LEU
96
HELX_P
L
ARG
96
B
ARG
100
5
AA9
5
L
SER
121
B
SER
126
HELX_P
L
ALA
127
B
ALA
132
1
AB1
7
L
THR
181
B
THR
186
HELX_P
L
SER
187
B
SER
192
1
AB2
7
disulf
2.096
H
CYS
22
A
SG
CYS
22
1_555
H
CYS
92
A
SG
CYS
96
1_555
disulf
2.077
A
Q
H
CYS
100
A
SG
CYS
105
1_555
H
CYS
100
A
SG
CYS
121
1_555
disulf
2.085
H
CYS
140
A
SG
CYS
172
1_555
H
CYS
196
A
SG
CYS
228
1_555
disulf
2.061
L
CYS
23
B
SG
CYS
22
1_555
L
CYS
88
B
SG
CYS
89
1_555
disulf
2.058
L
CYS
134
B
SG
CYS
139
1_555
L
CYS
193
B
SG
CYS
198
1_555
covale
1.330
both
G
H
H
ASP
100
A
C
ASP
111
1_555
H
TYS
100
A
N
TYS
112
1_555
covale
1.329
both
H
I
H
TYS
100
A
C
TYS
112
1_555
H
TYS
100
A
N
TYS
113
1_555
covale
1.322
both
I
J
H
TYS
100
A
C
TYS
113
1_555
H
ASP
100
A
N
ASP
114
1_555
covale
1.437
one
N-Glycosylation
L
ASN
26
B
ND2
ASN
25
1_555
A
NAG
1
C
C1
NAG
1_555
covale
1.433
both
A
NAG
1
C
O4
NAG
1_555
A
NAG
2
C
C1
NAG
1_555
covale
1.432
both
A
NAG
2
C
O4
NAG
1_555
A
BMA
3
C
C1
BMA
1_555
IMMUNE SYSTEM
VRC26, CAP256, V1V2, HIV-1, Env, Envelope, Broadly Neutralizing, superinfection, IMMUNE SYSTEM
H
GLY
133
A
GLY
165
1
H
GLY
134
A
GLY
166
0.59
H
PHE
146
A
PHE
178
1
H
PRO
147
A
PRO
179
-8.57
H
GLU
148
A
GLU
180
1
H
PRO
149
A
PRO
181
-3.56
H
PRO
213
A
PRO
245
1
H
LYS
214
A
LYS
246
12.51
L
TYR
140
B
TYR
145
1
L
PRO
141
B
PRO
146
0.19
5DT1
PDB
1
1
5DT1
5DT1
PDB
2
1
5DT1
1
225
5DT1
1
225
5DT1
H
1
1
257
1
212
5DT1
1
212
5DT1
L
2
1
217
4
6
4
2
4
4
3
5
4
3
4
4
4
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
H
GLN
3
A
GLN
3
H
SER
7
A
SER
7
H
LEU
18
A
LEU
18
H
SER
25
A
SER
25
H
THR
77
A
THR
78
H
MET
82
A
MET
83
H
PHE
67
A
PHE
68
H
ASP
72
A
ASP
73
H
GLY
10
A
GLY
10
H
VAL
12
A
VAL
12
H
THR
107
A
THR
139
H
VAL
111
A
VAL
143
H
ALA
88
A
ALA
92
H
GLU
98
A
GLU
102
H
TYR
32
A
TYR
32
H
GLN
39
A
GLN
39
H
LEU
45
A
LEU
45
H
ILE
51
A
ILE
51
H
LYS
57
A
LYS
58
H
HIS
59
A
HIS
60
H
GLY
10
A
GLY
10
H
VAL
12
A
VAL
12
H
THR
107
A
THR
139
H
VAL
111
A
VAL
143
H
ALA
88
A
ALA
92
H
GLU
98
A
GLU
102
H
ALA
101
A
ALA
132
H
TRP
103
A
TRP
135
A
H
GLU
100
A
GLU
104
H
GLU
100
A
GLU
107
C
H
LYS
100
A
LYS
123
H
ARG
100
A
ARG
125
S
U
H
SER
120
A
SER
152
H
LEU
124
A
LEU
156
H
THR
135
A
THR
167
H
TYR
145
A
TYR
177
H
TYR
176
A
TYR
208
H
PRO
185
A
PRO
217
H
VAL
163
A
VAL
195
H
THR
165
A
THR
197
H
THR
131
A
THR
163
H
SER
132
A
SER
164
H
THR
135
A
THR
167
H
TYR
145
A
TYR
177
H
TYR
176
A
TYR
208
H
PRO
185
A
PRO
217
H
VAL
169
A
VAL
201
H
LEU
170
A
LEU
202
H
THR
151
A
THR
183
H
TRP
154
A
TRP
186
H
TYR
194
A
TYR
226
H
HIS
200
A
HIS
232
H
THR
205
A
THR
237
H
VAL
211
A
VAL
243
L
SER
9
B
SER
9
L
ALA
13
B
ALA
12
L
THR
102
B
THR
106
L
VAL
106
B
VAL
110
L
ALA
84
B
ALA
85
L
THR
90
B
THR
91
L
SER
34
B
SER
35
L
GLN
38
B
GLN
39
L
GLN
45
B
GLN
46
L
ILE
48
B
ILE
49
L
SER
9
B
SER
9
L
ALA
13
B
ALA
12
L
THR
102
B
THR
106
L
VAL
106
B
VAL
110
L
ALA
84
B
ALA
85
L
THR
90
B
THR
91
L
VAL
97
B
VAL
101
L
PHE
98
B
PHE
102
L
VAL
19
B
VAL
18
L
SER
24
B
SER
23
L
SER
70
B
SER
71
L
ILE
75
B
ILE
76
L
PHE
62
B
PHE
63
L
SER
67
B
SER
68
L
THR
114
B
THR
119
L
PHE
118
B
PHE
123
L
ALA
130
B
ALA
135
L
PHE
139
B
PHE
144
L
TYR
172
B
TYR
177
L
LEU
180
B
LEU
185
L
VAL
159
B
VAL
164
L
THR
161
B
THR
166
L
THR
114
B
THR
119
L
PHE
118
B
PHE
123
L
ALA
130
B
ALA
135
L
PHE
139
B
PHE
144
L
TYR
172
B
TYR
177
L
LEU
180
B
LEU
185
L
SER
165
B
SER
170
L
LYS
166
B
LYS
171
L
SER
153
B
SER
158
L
VAL
155
B
VAL
160
L
THR
145
B
THR
150
L
ALA
150
B
ALA
155
L
TYR
191
B
TYR
196
L
HIS
197
B
HIS
202
L
SER
200
B
SER
205
L
VAL
206
B
VAL
211
18
P 21 2 21