0.033392 0.014580 0.001833 0.000000 0.030403 0.001102 0.000000 0.000000 0.015680 0.00000 0.00000 0.00000 Nossoni, Z. Nosrati, M. Geiger, J.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 91.01 92.23 113.59 29.947 35.890 63.866 C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C20 H28 O 284.436 RETINAL non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N O N 4 N C N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N N N 29 N C N 30 N N N 31 N N N 32 N O N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N O N 55 N N N 56 N O N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 S C N 67 N C N 68 N O N 69 N C N 70 N C N 71 N O N 72 N O N 73 N O N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N N N 82 R C N 83 N C N 84 N O N 85 N C N 86 N S N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N C N 102 N O N 103 N N N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N O N 123 N O N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N N N 135 N C N 136 N C N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 N C Y 149 N C Y 150 N N Y 151 N C Y 152 N C Y 153 N N N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N O N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 S C N 173 N C N 174 N C N 175 N C N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N N N 191 S C N 192 N C N 193 N O N 194 N C N 195 N C N 196 N C N 197 N C N 198 N O N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 S C N 214 N C N 215 N O N 216 N C N 217 N C N 218 N C N 219 N C N 220 N N N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N S N 244 N C N 245 N O N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N N N 258 S C N 259 N C N 260 N O N 261 N C Y 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C N 268 N O N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N C N 281 N C N 282 N C N 283 N C N 284 N C N 285 N C N 286 N C N 287 N C N 288 N C N 289 N C N 290 N C N 291 N C N 292 N C N 293 N C N 294 N C N 295 N O N 296 N C N 297 N C N 298 N C N 299 N C N 300 N C N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N N N 330 S C N 331 N C N 332 N O N 333 N C N 334 N O N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N N N 344 S C N 345 N C N 346 N O N 347 R C N 348 N O N 349 N C N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N N N 361 S C N 362 N C N 363 N O N 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N N Y 369 N C Y 370 N C Y 371 N C Y 372 N C Y 373 N C N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N N N 388 S C N 389 N C N 390 N O N 391 N C Y 392 N C Y 393 N C Y 394 N C Y 395 N C Y 396 N C Y 397 N C N 398 N O N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 N C N 416 N C N 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing Y 146 N sing Y 147 N doub Y 148 N doub N 149 N sing Y 150 N sing N 151 N sing Y 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing Y 254 N doub Y 255 N sing Y 256 N sing N 257 N sing Y 258 N doub N 259 N sing Y 260 N doub N 261 N sing Y 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 E doub N 283 N sing N 284 N sing N 285 N sing N 286 E doub N 287 N sing N 288 N sing N 289 N sing N 290 E doub N 291 N sing N 292 N sing N 293 N sing N 294 E doub N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing Y 355 N doub Y 356 N sing Y 357 N sing N 358 N sing Y 359 N doub Y 360 N sing Y 361 N sing N 362 N sing Y 363 N sing Y 364 N doub N 365 N sing Y 366 N doub N 367 N sing Y 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N doub N 379 N sing N 380 N sing N 381 N sing N 382 N sing Y 383 N doub Y 384 N sing Y 385 N sing N 386 N sing Y 387 N doub N 388 N sing Y 389 N doub N 390 N sing Y 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N doub N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing To Be Published 0353 Crystal structure of the Q108K:K40L:T53C mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.55 Angstrom Resolution 10.2210/pdb5fen/pdb pdb_00005fen 100 1 CCD 2011-12-08 MARMOSAIC 300 mm CCD SINGLE WAVELENGTH M x-ray 1 0.9786 1.0 21-ID-D APS 0.9786 SYNCHROTRON APS BEAMLINE 21-ID-D 15584.521 Retinol-binding protein 2 Q108K, K40L, T53C 2 man polymer 284.436 RETINAL 2 syn non-polymer 59.044 ACETATE ION 2 syn non-polymer 18.015 water 209 nat water Cellular retinol-binding protein II,CRBP-II no no TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTLVIDQDGDNFKTKCTSTFRNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTLVIDQDGDNFKTKCTSTFRNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKKWIEGDKLYLELTCGDQVCRQVFKKK A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 133 RBP2, CRBP2 9606 Homo sapiens 511693 Escherichia coli BL21 Plasmid Biological sequence pET17b 2.02 38.97 VAPOR DIFFUSION, HANGING DROP 4.5 30% PEG4000, 0.1M Ammonium Acetate, 0.1 M Sodium Acetate pH 4.5 4-4.8 298 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Data collection Database references Refinement description 1 0 2016-12-21 1 1 2023-09-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession N RCSB Y RCSB 2015-12-17 REL REL 1 B O HOH 412 6.32 RET RETINAL ACT ACETATE ION HOH water 2RCT PDB experimental model RET 1 2 RET RET 201 A ACT 1 3 ACT ACT 202 A RET 2 2 RET RET 201 B ACT 1 3 ACT ACT 202 B HOH 34 4 HOH HOH 301 A HOH 191 4 HOH HOH 302 A HOH 145 4 HOH HOH 303 A HOH 151 4 HOH HOH 304 A HOH 144 4 HOH HOH 305 A HOH 125 4 HOH HOH 306 A HOH 130 4 HOH HOH 307 A HOH 38 4 HOH HOH 308 A HOH 44 4 HOH HOH 309 A HOH 215 4 HOH HOH 310 A HOH 96 4 HOH HOH 311 A HOH 217 4 HOH HOH 312 A HOH 105 4 HOH HOH 313 A HOH 216 4 HOH HOH 314 A HOH 31 4 HOH HOH 315 A HOH 68 4 HOH HOH 316 A HOH 139 4 HOH HOH 317 A HOH 36 4 HOH HOH 318 A HOH 30 4 HOH HOH 319 A HOH 77 4 HOH HOH 320 A HOH 172 4 HOH HOH 321 A HOH 165 4 HOH HOH 322 A HOH 146 4 HOH HOH 323 A HOH 99 4 HOH HOH 324 A HOH 7 4 HOH HOH 325 A HOH 75 4 HOH HOH 326 A HOH 48 4 HOH HOH 327 A HOH 21 4 HOH HOH 328 A HOH 4 4 HOH HOH 329 A HOH 108 4 HOH HOH 330 A HOH 134 4 HOH HOH 331 A HOH 78 4 HOH HOH 332 A HOH 6 4 HOH HOH 333 A HOH 177 4 HOH HOH 334 A HOH 18 4 HOH HOH 335 A HOH 9 4 HOH HOH 336 A HOH 41 4 HOH HOH 337 A HOH 174 4 HOH HOH 338 A HOH 37 4 HOH HOH 339 A HOH 210 4 HOH HOH 340 A HOH 218 4 HOH HOH 341 A HOH 123 4 HOH HOH 342 A HOH 5 4 HOH HOH 343 A HOH 173 4 HOH HOH 344 A HOH 32 4 HOH HOH 345 A HOH 58 4 HOH HOH 346 A HOH 166 4 HOH HOH 347 A HOH 117 4 HOH HOH 348 A HOH 159 4 HOH HOH 349 A HOH 119 4 HOH HOH 350 A HOH 113 4 HOH HOH 351 A HOH 152 4 HOH HOH 352 A HOH 59 4 HOH HOH 353 A HOH 160 4 HOH HOH 354 A HOH 120 4 HOH HOH 355 A HOH 148 4 HOH HOH 356 A HOH 51 4 HOH HOH 357 A HOH 131 4 HOH HOH 358 A HOH 188 4 HOH HOH 359 A HOH 169 4 HOH HOH 360 A HOH 103 4 HOH HOH 361 A HOH 156 4 HOH HOH 362 A HOH 79 4 HOH HOH 363 A HOH 24 4 HOH HOH 364 A HOH 71 4 HOH HOH 365 A HOH 62 4 HOH HOH 366 A HOH 26 4 HOH HOH 367 A HOH 3 4 HOH HOH 368 A HOH 73 4 HOH HOH 369 A HOH 97 4 HOH HOH 370 A HOH 221 4 HOH HOH 371 A HOH 91 4 HOH HOH 372 A HOH 143 4 HOH HOH 373 A HOH 163 4 HOH HOH 374 A HOH 170 4 HOH HOH 375 A HOH 83 4 HOH HOH 376 A HOH 100 4 HOH HOH 377 A HOH 231 4 HOH HOH 378 A HOH 72 4 HOH HOH 379 A HOH 33 4 HOH HOH 380 A HOH 219 4 HOH HOH 381 A HOH 15 4 HOH HOH 382 A HOH 178 4 HOH HOH 383 A HOH 115 4 HOH HOH 384 A HOH 226 4 HOH HOH 385 A HOH 95 4 HOH HOH 386 A HOH 1 4 HOH HOH 387 A HOH 222 4 HOH HOH 388 A HOH 56 4 HOH HOH 389 A HOH 171 4 HOH HOH 390 A HOH 132 4 HOH HOH 391 A HOH 192 4 HOH HOH 392 A HOH 158 4 HOH HOH 393 A HOH 114 4 HOH HOH 394 A HOH 92 4 HOH HOH 395 A HOH 225 4 HOH HOH 396 A HOH 150 4 HOH HOH 397 A HOH 153 4 HOH HOH 301 B HOH 89 4 HOH HOH 302 B HOH 190 4 HOH HOH 303 B HOH 157 4 HOH HOH 304 B HOH 94 4 HOH HOH 305 B HOH 17 4 HOH HOH 306 B HOH 208 4 HOH HOH 307 B HOH 43 4 HOH HOH 308 B HOH 175 4 HOH HOH 309 B HOH 126 4 HOH HOH 310 B HOH 20 4 HOH HOH 311 B HOH 118 4 HOH HOH 312 B HOH 102 4 HOH HOH 313 B HOH 52 4 HOH HOH 314 B HOH 70 4 HOH HOH 315 B HOH 124 4 HOH HOH 316 B HOH 142 4 HOH HOH 317 B HOH 149 4 HOH HOH 318 B HOH 35 4 HOH HOH 319 B HOH 128 4 HOH HOH 320 B HOH 110 4 HOH HOH 321 B HOH 209 4 HOH HOH 322 B HOH 19 4 HOH HOH 323 B HOH 27 4 HOH HOH 324 B HOH 16 4 HOH HOH 325 B HOH 136 4 HOH HOH 326 B HOH 12 4 HOH HOH 327 B HOH 11 4 HOH HOH 328 B HOH 194 4 HOH HOH 329 B HOH 147 4 HOH HOH 330 B HOH 40 4 HOH HOH 331 B HOH 25 4 HOH HOH 332 B HOH 29 4 HOH HOH 333 B HOH 66 4 HOH HOH 334 B HOH 46 4 HOH HOH 335 B HOH 61 4 HOH HOH 336 B HOH 228 4 HOH HOH 337 B HOH 82 4 HOH HOH 338 B HOH 13 4 HOH HOH 339 B HOH 45 4 HOH HOH 340 B HOH 229 4 HOH HOH 341 B HOH 129 4 HOH HOH 342 B HOH 39 4 HOH HOH 343 B HOH 86 4 HOH HOH 344 B HOH 42 4 HOH HOH 345 B HOH 187 4 HOH HOH 346 B HOH 207 4 HOH HOH 347 B HOH 140 4 HOH HOH 348 B HOH 14 4 HOH HOH 349 B HOH 57 4 HOH HOH 350 B HOH 121 4 HOH HOH 351 B HOH 88 4 HOH HOH 352 B HOH 80 4 HOH HOH 353 B HOH 87 4 HOH HOH 354 B HOH 184 4 HOH HOH 355 B HOH 220 4 HOH HOH 356 B HOH 181 4 HOH HOH 357 B HOH 23 4 HOH HOH 358 B HOH 107 4 HOH HOH 359 B HOH 47 4 HOH HOH 360 B HOH 63 4 HOH HOH 361 B HOH 54 4 HOH HOH 362 B HOH 122 4 HOH HOH 363 B HOH 69 4 HOH HOH 364 B HOH 213 4 HOH HOH 365 B HOH 93 4 HOH HOH 366 B HOH 8 4 HOH HOH 367 B HOH 60 4 HOH HOH 368 B HOH 189 4 HOH HOH 369 B HOH 141 4 HOH HOH 370 B HOH 227 4 HOH HOH 371 B HOH 203 4 HOH HOH 372 B HOH 116 4 HOH HOH 373 B HOH 53 4 HOH HOH 374 B HOH 10 4 HOH HOH 375 B HOH 2 4 HOH HOH 376 B HOH 193 4 HOH HOH 377 B HOH 230 4 HOH HOH 378 B HOH 106 4 HOH HOH 379 B HOH 101 4 HOH HOH 380 B HOH 109 4 HOH HOH 381 B HOH 84 4 HOH HOH 382 B HOH 161 4 HOH HOH 383 B HOH 223 4 HOH HOH 384 B HOH 65 4 HOH HOH 385 B HOH 67 4 HOH HOH 386 B HOH 138 4 HOH HOH 387 B HOH 185 4 HOH HOH 388 B HOH 50 4 HOH HOH 389 B HOH 155 4 HOH HOH 390 B HOH 179 4 HOH HOH 391 B HOH 85 4 HOH HOH 392 B HOH 206 4 HOH HOH 393 B HOH 168 4 HOH HOH 394 B HOH 182 4 HOH HOH 395 B HOH 133 4 HOH HOH 396 B HOH 90 4 HOH HOH 397 B HOH 127 4 HOH HOH 398 B HOH 224 4 HOH HOH 399 B HOH 180 4 HOH HOH 400 B HOH 195 4 HOH HOH 401 B HOH 104 4 HOH HOH 402 B HOH 211 4 HOH HOH 403 B HOH 214 4 HOH HOH 404 B HOH 112 4 HOH HOH 405 B HOH 81 4 HOH HOH 406 B HOH 183 4 HOH HOH 407 B HOH 201 4 HOH HOH 408 B HOH 64 4 HOH HOH 409 B HOH 111 4 HOH HOH 410 B HOH 154 4 HOH HOH 411 B HOH 186 4 HOH HOH 412 B THR 1 n 1 THR 1 A ARG 2 n 2 ARG 2 A ASP 3 n 3 ASP 3 A GLN 4 n 4 GLN 4 A ASN 5 n 5 ASN 5 A GLY 6 n 6 GLY 6 A THR 7 n 7 THR 7 A TRP 8 n 8 TRP 8 A GLU 9 n 9 GLU 9 A MET 10 n 10 MET 10 A GLU 11 n 11 GLU 11 A SER 12 n 12 SER 12 A ASN 13 n 13 ASN 13 A GLU 14 n 14 GLU 14 A ASN 15 n 15 ASN 15 A PHE 16 n 16 PHE 16 A GLU 17 n 17 GLU 17 A GLY 18 n 18 GLY 18 A TYR 19 n 19 TYR 19 A MET 20 n 20 MET 20 A LYS 21 n 21 LYS 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A ASP 24 n 24 ASP 24 A ILE 25 n 25 ILE 25 A ASP 26 n 26 ASP 26 A PHE 27 n 27 PHE 27 A ALA 28 n 28 ALA 28 A THR 29 n 29 THR 29 A ARG 30 n 30 ARG 30 A LYS 31 n 31 LYS 31 A ILE 32 n 32 ILE 32 A ALA 33 n 33 ALA 33 A VAL 34 n 34 VAL 34 A ARG 35 n 35 ARG 35 A LEU 36 n 36 LEU 36 A THR 37 n 37 THR 37 A GLN 38 n 38 GLN 38 A THR 39 n 39 THR 39 A LEU 40 n 40 LEU 40 A VAL 41 n 41 VAL 41 A ILE 42 n 42 ILE 42 A ASP 43 n 43 ASP 43 A GLN 44 n 44 GLN 44 A ASP 45 n 45 ASP 45 A GLY 46 n 46 GLY 46 A ASP 47 n 47 ASP 47 A ASN 48 n 48 ASN 48 A PHE 49 n 49 PHE 49 A LYS 50 n 50 LYS 50 A THR 51 n 51 THR 51 A LYS 52 n 52 LYS 52 A CYS 53 n 53 CYS 53 A THR 54 n 54 THR 54 A SER 55 n 55 SER 55 A THR 56 n 56 THR 56 A PHE 57 n 57 PHE 57 A ARG 58 n 58 ARG 58 A ASN 59 n 59 ASN 59 A TYR 60 n 60 TYR 60 A ASP 61 n 61 ASP 61 A VAL 62 n 62 VAL 62 A ASP 63 n 63 ASP 63 A PHE 64 n 64 PHE 64 A THR 65 n 65 THR 65 A VAL 66 n 66 VAL 66 A GLY 67 n 67 GLY 67 A VAL 68 n 68 VAL 68 A GLU 69 n 69 GLU 69 A PHE 70 n 70 PHE 70 A ASP 71 n 71 ASP 71 A GLU 72 n 72 GLU 72 A TYR 73 n 73 TYR 73 A THR 74 n 74 THR 74 A LYS 75 n 75 LYS 75 A SER 76 n 76 SER 76 A LEU 77 n 77 LEU 77 A ASP 78 n 78 ASP 78 A ASN 79 n 79 ASN 79 A ARG 80 n 80 ARG 80 A HIS 81 n 81 HIS 81 A VAL 82 n 82 VAL 82 A LYS 83 n 83 LYS 83 A ALA 84 n 84 ALA 84 A LEU 85 n 85 LEU 85 A VAL 86 n 86 VAL 86 A THR 87 n 87 THR 87 A TRP 88 n 88 TRP 88 A GLU 89 n 89 GLU 89 A GLY 90 n 90 GLY 90 A ASP 91 n 91 ASP 91 A VAL 92 n 92 VAL 92 A LEU 93 n 93 LEU 93 A VAL 94 n 94 VAL 94 A CYS 95 n 95 CYS 95 A VAL 96 n 96 VAL 96 A GLN 97 n 97 GLN 97 A LYS 98 n 98 LYS 98 A GLY 99 n 99 GLY 99 A GLU 100 n 100 GLU 100 A LYS 101 n 101 LYS 101 A GLU 102 n 102 GLU 102 A ASN 103 n 103 ASN 103 A ARG 104 n 104 ARG 104 A GLY 105 n 105 GLY 105 A TRP 106 n 106 TRP 106 A LYS 107 n 107 LYS 107 A LYS 108 n 108 LYS 108 A TRP 109 n 109 TRP 109 A ILE 110 n 110 ILE 110 A GLU 111 n 111 GLU 111 A GLY 112 n 112 GLY 112 A ASP 113 n 113 ASP 113 A LYS 114 n 114 LYS 114 A LEU 115 n 115 LEU 115 A TYR 116 n 116 TYR 116 A LEU 117 n 117 LEU 117 A GLU 118 n 118 GLU 118 A LEU 119 n 119 LEU 119 A THR 120 n 120 THR 120 A CYS 121 n 121 CYS 121 A GLY 122 n 122 GLY 122 A ASP 123 n 123 ASP 123 A GLN 124 n 124 GLN 124 A VAL 125 n 125 VAL 125 A CYS 126 n 126 CYS 126 A ARG 127 n 127 ARG 127 A GLN 128 n 128 GLN 128 A VAL 129 n 129 VAL 129 A PHE 130 n 130 PHE 130 A LYS 131 n 131 LYS 131 A LYS 132 n 132 LYS 132 A LYS 133 n 133 LYS 133 A THR 1 n 1 THR 1 B ARG 2 n 2 ARG 2 B ASP 3 n 3 ASP 3 B GLN 4 n 4 GLN 4 B ASN 5 n 5 ASN 5 B GLY 6 n 6 GLY 6 B THR 7 n 7 THR 7 B TRP 8 n 8 TRP 8 B GLU 9 n 9 GLU 9 B MET 10 n 10 MET 10 B GLU 11 n 11 GLU 11 B SER 12 n 12 SER 12 B ASN 13 n 13 ASN 13 B GLU 14 n 14 GLU 14 B ASN 15 n 15 ASN 15 B PHE 16 n 16 PHE 16 B GLU 17 n 17 GLU 17 B GLY 18 n 18 GLY 18 B TYR 19 n 19 TYR 19 B MET 20 n 20 MET 20 B LYS 21 n 21 LYS 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B ASP 24 n 24 ASP 24 B ILE 25 n 25 ILE 25 B ASP 26 n 26 ASP 26 B PHE 27 n 27 PHE 27 B ALA 28 n 28 ALA 28 B THR 29 n 29 THR 29 B ARG 30 n 30 ARG 30 B LYS 31 n 31 LYS 31 B ILE 32 n 32 ILE 32 B ALA 33 n 33 ALA 33 B VAL 34 n 34 VAL 34 B ARG 35 n 35 ARG 35 B LEU 36 n 36 LEU 36 B THR 37 n 37 THR 37 B GLN 38 n 38 GLN 38 B THR 39 n 39 THR 39 B LEU 40 n 40 LEU 40 B VAL 41 n 41 VAL 41 B ILE 42 n 42 ILE 42 B ASP 43 n 43 ASP 43 B GLN 44 n 44 GLN 44 B ASP 45 n 45 ASP 45 B GLY 46 n 46 GLY 46 B ASP 47 n 47 ASP 47 B ASN 48 n 48 ASN 48 B PHE 49 n 49 PHE 49 B LYS 50 n 50 LYS 50 B THR 51 n 51 THR 51 B LYS 52 n 52 LYS 52 B CYS 53 n 53 CYS 53 B THR 54 n 54 THR 54 B SER 55 n 55 SER 55 B THR 56 n 56 THR 56 B PHE 57 n 57 PHE 57 B ARG 58 n 58 ARG 58 B ASN 59 n 59 ASN 59 B TYR 60 n 60 TYR 60 B ASP 61 n 61 ASP 61 B VAL 62 n 62 VAL 62 B ASP 63 n 63 ASP 63 B PHE 64 n 64 PHE 64 B THR 65 n 65 THR 65 B VAL 66 n 66 VAL 66 B GLY 67 n 67 GLY 67 B VAL 68 n 68 VAL 68 B GLU 69 n 69 GLU 69 B PHE 70 n 70 PHE 70 B ASP 71 n 71 ASP 71 B GLU 72 n 72 GLU 72 B TYR 73 n 73 TYR 73 B THR 74 n 74 THR 74 B LYS 75 n 75 LYS 75 B SER 76 n 76 SER 76 B LEU 77 n 77 LEU 77 B ASP 78 n 78 ASP 78 B ASN 79 n 79 ASN 79 B ARG 80 n 80 ARG 80 B HIS 81 n 81 HIS 81 B VAL 82 n 82 VAL 82 B LYS 83 n 83 LYS 83 B ALA 84 n 84 ALA 84 B LEU 85 n 85 LEU 85 B VAL 86 n 86 VAL 86 B THR 87 n 87 THR 87 B TRP 88 n 88 TRP 88 B GLU 89 n 89 GLU 89 B GLY 90 n 90 GLY 90 B ASP 91 n 91 ASP 91 B VAL 92 n 92 VAL 92 B LEU 93 n 93 LEU 93 B VAL 94 n 94 VAL 94 B CYS 95 n 95 CYS 95 B VAL 96 n 96 VAL 96 B GLN 97 n 97 GLN 97 B LYS 98 n 98 LYS 98 B GLY 99 n 99 GLY 99 B GLU 100 n 100 GLU 100 B LYS 101 n 101 LYS 101 B GLU 102 n 102 GLU 102 B ASN 103 n 103 ASN 103 B ARG 104 n 104 ARG 104 B GLY 105 n 105 GLY 105 B TRP 106 n 106 TRP 106 B LYS 107 n 107 LYS 107 B LYS 108 n 108 LYS 108 B TRP 109 n 109 TRP 109 B ILE 110 n 110 ILE 110 B GLU 111 n 111 GLU 111 B GLY 112 n 112 GLY 112 B ASP 113 n 113 ASP 113 B LYS 114 n 114 LYS 114 B LEU 115 n 115 LEU 115 B TYR 116 n 116 TYR 116 B LEU 117 n 117 LEU 117 B GLU 118 n 118 GLU 118 B LEU 119 n 119 LEU 119 B THR 120 n 120 THR 120 B CYS 121 n 121 CYS 121 B GLY 122 n 122 GLY 122 B ASP 123 n 123 ASP 123 B GLN 124 n 124 GLN 124 B VAL 125 n 125 VAL 125 B CYS 126 n 126 CYS 126 B ARG 127 n 127 ARG 127 B GLN 128 n 128 GLN 128 B VAL 129 n 129 VAL 129 B PHE 130 n 130 PHE 130 B LYS 131 n 131 LYS 131 B LYS 132 n 132 LYS 132 B LYS 133 n 133 LYS 133 B author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 60 A O TYR 60 A N CYS 53 A N CYS 53 A O LYS 52 A O LYS 52 A N VAL 41 A N VAL 41 A O LEU 40 A O LEU 40 A N TRP 8 A N TRP 8 A N GLU 11 A N GLU 11 A O VAL 129 A O VAL 129 A O GLN 128 A O GLN 128 A N LEU 117 A N LEU 117 A O TYR 116 A O TYR 116 A N TRP 109 A N TRP 109 A O TRP 106 A O TRP 106 A N CYS 95 A N CYS 95 A O VAL 94 A O VAL 94 A N THR 87 A N THR 87 A O ALA 84 A O ALA 84 A N PHE 70 A N PHE 70 B O PHE 64 B O PHE 64 B N PHE 49 B N PHE 49 B O LYS 52 B O LYS 52 B N VAL 41 B N VAL 41 B O LEU 40 B O LEU 40 B N TRP 8 B N TRP 8 B N GLU 11 B N GLU 11 B O VAL 129 B O VAL 129 B O CYS 126 B O CYS 126 B N LEU 119 B N LEU 119 B O GLU 118 B O GLU 118 B N LYS 107 B N LYS 107 B O TRP 106 B O TRP 106 B N CYS 95 B N CYS 95 B O VAL 94 B O VAL 94 B N THR 87 B N THR 87 B O ALA 84 B O ALA 84 B N PHE 70 B N PHE 70 1 B CG ASP 113 B CG ASP 113 1 Y 1 B OD1 ASP 113 B OD1 ASP 113 1 Y 1 B OD2 ASP 113 B OD2 ASP 113 1 Y 1 A B O O HOH HOH 302 359 2.18 1_555 1_554 1 A PHE 57 -88.01 -113.82 1 A LEU 77 -123.49 -99.40 1 B THR 74 -78.31 47.57 1 B LEU 77 -127.34 -105.73 0.0776 0.0051 -0.2072 0.2777 -0.1214 -0.3553 0.2413 0.1994 0.2015 1.550 28.796 1662 32791 5.07 92.80 0.49 1 FREE R-VALUE 1.97 MOLECULAR REPLACEMENT 25.18 0.73 1.00 2RCT ML FLAT BULK SOLVENT MODEL 57.052 0.423 1.550 28.796 209 2442 48 0 2185 0.007 2300 1.135 3102 15.674 856 0.071 330 0.011 414 0.3261 0.2842 1.5956 103 1925 69.00 0.3488 0.2770 1.6471 127 2409 85.00 0.3217 0.2602 1.7060 138 2571 92.00 0.2835 0.2516 1.7743 151 2640 94.00 0.3092 0.2366 1.8550 147 2616 95.00 0.2712 0.2180 1.9528 143 2677 96.00 0.2543 0.2080 2.0751 150 2661 96.00 0.2814 0.1948 2.2353 137 2714 96.00 0.2314 0.2047 2.4601 141 2715 97.00 0.2608 0.1992 2.8158 139 2724 97.00 0.2180 0.1880 3.5466 133 2764 98.00 0.1974 0.1737 28.8007 153 2713 97.00 1.55 50 5FEN 32791 1 32.7 3.8 92.8 0.5 1.55 1.6 3.2 1 3.7 69 refinement PHENIX 1.7.2_869 data reduction HKL-2000 data scaling HKL-2000 phasing MOLREP Crystal structure of the Q108K:K40L:T53C mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal after 24 hours of incubation at 1.55 Angstrom Resolution 1 N N 1 N N 2 N N 3 N N 2 N N 3 N N 4 N N 4 N N A ASN 15 A ASN 15 HELX_P A LEU 23 A LEU 23 1 AA1 9 A ASP 26 A ASP 26 HELX_P A LEU 36 A LEU 36 1 AA2 11 B ASN 15 B ASN 15 HELX_P B LEU 23 B LEU 23 1 AA3 9 B ASP 26 B ASP 26 HELX_P B VAL 34 B VAL 34 1 AA4 9 covale 1.265 one A LYS 108 A NZ LYS 108 1_555 A RET 201 C C15 RET 1_555 covale 1.260 one B LYS 108 B NZ LYS 108 1_555 B RET 201 E C15 RET 1_555 TRANSPORT PROTEIN all-trans retinal, retinal light absorbing pigment, wavelength regulation, TRANSPORT PROTEIN RET2_HUMAN UNP 1 2 P50120 TRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRLTQTKVIDQDGDNFKTKTTSTFRNYDVDFTVGVEFDEYTKSLDNR HVKALVTWEGDVLVCVQKGEKENRGWKQWIEGDKLYLELTCGDQVCRQVFKKK 2 134 5FEN 1 133 P50120 A 1 1 133 2 134 5FEN 1 133 P50120 B 1 1 133 1 LYS engineered mutation LEU 40 5FEN A P50120 UNP 41 40 1 THR engineered mutation CYS 53 5FEN A P50120 UNP 54 53 1 GLN engineered mutation LYS 108 5FEN A P50120 UNP 109 108 2 LYS engineered mutation LEU 40 5FEN B P50120 UNP 41 40 2 THR engineered mutation CYS 53 5FEN B P50120 UNP 54 53 2 GLN engineered mutation LYS 108 5FEN B P50120 UNP 109 108 10 10 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A TYR 60 A TYR 60 A THR 65 A THR 65 A ASN 48 A ASN 48 A THR 54 A THR 54 A THR 39 A THR 39 A ASP 45 A ASP 45 A GLY 6 A GLY 6 A GLU 14 A GLU 14 A GLN 124 A GLN 124 A LYS 132 A LYS 132 A LYS 114 A LYS 114 A CYS 121 A CYS 121 A GLY 105 A GLY 105 A GLU 111 A GLU 111 A VAL 92 A VAL 92 A LYS 98 A LYS 98 A HIS 81 A HIS 81 A GLU 89 A GLU 89 A PHE 70 A PHE 70 A TYR 73 A TYR 73 B TYR 60 B TYR 60 B THR 65 B THR 65 B ASN 48 B ASN 48 B THR 54 B THR 54 B THR 39 B THR 39 B ASP 45 B ASP 45 B GLY 6 B GLY 6 B GLU 14 B GLU 14 B GLN 124 B GLN 124 B LYS 132 B LYS 132 B LYS 114 B LYS 114 B CYS 121 B CYS 121 B GLY 105 B GLY 105 B GLU 111 B GLU 111 B VAL 92 B VAL 92 B LYS 98 B LYS 98 B HIS 81 B HIS 81 B GLU 89 B GLU 89 B PHE 70 B PHE 70 B TYR 73 B TYR 73 binding site for residue RET A 201 A RET 201 Software 7 binding site for residue ACT A 202 A ACT 202 Software 4 binding site for residue ACT B 202 B ACT 202 Software 5 A PHE 16 A PHE 16 7 1_555 A MET 20 A MET 20 7 1_555 A THR 51 A THR 51 7 1_555 A TYR 60 A TYR 60 7 1_555 A VAL 62 A VAL 62 7 1_555 A LEU 77 A LEU 77 7 1_555 A LYS 108 A LYS 108 7 1_555 A GLU 72 A GLU 72 4 1_555 A GLN 97 A GLN 97 4 1_555 A TRP 106 A TRP 106 4 1_555 A HOH 391 G HOH 4 1_555 B VAL 62 B VAL 62 5 1_555 B GLU 72 B GLU 72 5 1_555 B GLN 97 B GLN 97 5 1_555 B TRP 106 B TRP 106 5 1_555 B HOH 379 H HOH 5 1_555 1 P 1