0.017285
0.000000
0.001441
0.000000
0.010262
0.000000
0.000000
0.000000
0.016371
0.00000
0.00000
0.00000
Murakami, R.
Miyoshi, T.
Uchiumi, T.
Ito, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
94.77
90.00
57.853
97.448
61.296
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H15 N5 O11 P2
443.201
n
GUANOSINE-5'-DIPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
P
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
C
N
84
R
C
N
85
N
O
N
86
S
C
N
87
N
O
N
88
R
C
N
89
N
O
N
90
R
C
Y
91
N
N
Y
92
N
C
Y
93
N
N
Y
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
C
N
99
N
N
N
100
N
N
Y
101
N
C
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
N
N
118
S
C
N
119
N
C
N
120
N
O
N
121
N
C
N
122
N
C
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
O
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
N
C
N
158
N
C
N
159
N
O
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
Y
171
N
C
Y
172
N
N
Y
173
N
C
Y
174
N
C
Y
175
N
N
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
S
C
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
N
N
235
S
C
N
236
N
C
N
237
N
O
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
N
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
S
N
266
N
C
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
O
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
R
C
N
338
N
O
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
N
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
N
388
N
O
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
N
406
N
C
N
407
N
C
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
Y
99
N
sing
Y
100
N
sing
Y
101
N
doub
N
102
N
sing
Y
103
N
sing
N
104
N
sing
Y
105
N
doub
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
Y
172
N
sing
Y
173
N
doub
Y
174
N
doub
N
175
N
sing
Y
176
N
sing
N
177
N
sing
Y
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
Y
280
N
doub
Y
281
N
sing
Y
282
N
sing
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
Y
355
N
sing
N
356
N
sing
Y
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
doub
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
US
Proteins
PSFGEY
0867
1097-0134
84
712
717
10.1002/prot.25009
26868175
Crystal structure of translation initiation factor 5B from the crenarchaeon Aeropyrum pernix.
2016
10.2210/pdb5fg3/pdb
pdb_00005fg3
95
1
CCD
2013-11-24
ADSC QUANTUM 210
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
AR-NW12A
Photon Factory
1.0000
SYNCHROTRON
PHOTON FACTORY BEAMLINE AR-NW12A
69455.719
Probable translation initiation factor IF-2
1
man
polymer
443.201
GUANOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
276
nat
water
no
no
MAGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKLVI
PGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKERRVPFLIAANKIDRIPGWKPNPDAPFIET
IRRQDPKVREILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIPELLAVLAGLTQTYLKERLRYAEG
PAKGVVLEVKEMQGFGTVVDAVIYDGVLKKEDIIVVGGREGPIVTRVRALLMPAPLQDIRSREARFVQVDRVYAAAGVRI
AAPGLDDVIAGSPIYAAESEEEARKLMEAVQREIEELRFRTENIGVVVKADTLGTLEALVEALRRRGVPVRLADIGPVSR
SDVLDAAVTRKIDPYLGVVLAFNVKVLPEAEEEASRAGVKIFRESMIYKLIEDYEEWVKKEKEAERLKALNSLIRPGKFR
ILPGYVFRRSDPAIVGVEVLGGVIRPGYPVMDSQGRELGRIMAIKDRDRSLEEARLGAAVAVSIQGRILIGRHANEGDIL
YTNVPAQHAYKILTEFKDLVSKDELDVLREIAEIKRRAADHEYNKVLLRLKIKRVSQHHHHHH
MAGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKLVI
PGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKERRVPFLIAANKIDRIPGWKPNPDAPFIET
IRRQDPKVREILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIPELLAVLAGLTQTYLKERLRYAEG
PAKGVVLEVKEMQGFGTVVDAVIYDGVLKKEDIIVVGGREGPIVTRVRALLMPAPLQDIRSREARFVQVDRVYAAAGVRI
AAPGLDDVIAGSPIYAAESEEEARKLMEAVQREIEELRFRTENIGVVVKADTLGTLEALVEALRRRGVPVRLADIGPVSR
SDVLDAAVTRKIDPYLGVVLAFNVKVLPEAEEEASRAGVKIFRESMIYKLIEDYEEWVKKEKEAERLKALNSLIRPGKFR
ILPGYVFRRSDPAIVGVEVLGGVIRPGYPVMDSQGRELGRIMAIKDRDRSLEEARLGAAVAVSIQGRILIGRHANEGDIL
YTNVPAQHAYKILTEFKDLVSKDELDVLREIAEIKRRAADHEYNKVLLRLKIKRVSQHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1
sample
1
623
infB, APE_2374
272557
Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
562
Escherichia coli
Biological sequence
2.51
50.98
VAPOR DIFFUSION, SITTING DROP
7.5
0.1 M Tris-HCl (pH7.5), 20%(w/v) PEG 3000, 0.2 M calcium acetate
293
citation
diffrn_source
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Derived calculations
Data collection
Database references
Refinement description
1
0
2016-05-04
1
1
2020-02-19
1
2
2023-11-08
_citation.journal_id_CSD
_diffrn_source.pdbx_synchrotron_site
_pdbx_struct_oper_list.symmetry_operation
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Japan
Japan Society for The Promotion of Science
15J04972
Japan
Japan Society for The Promotion of Science
21770108
Japan
Uchida Energy Science Promotion Foundation
22-1-10
Japan
The Ministry of Education,Culture,Sports,Science and Technology
24370073
N
RCSB
Y
PDBJ
2015-12-20
REL
REL
1
A
O
HOH
1076
6.48
GDP
GUANOSINE-5'-DIPHOSPHATE
HOH
water
1G7S
PDB
experimental model
GDP
1
2
GDP
GDP
701
A
HOH
267
3
HOH
HOH
801
A
HOH
14
3
HOH
HOH
802
A
HOH
8
3
HOH
HOH
803
A
HOH
36
3
HOH
HOH
804
A
HOH
47
3
HOH
HOH
805
A
HOH
132
3
HOH
HOH
806
A
HOH
265
3
HOH
HOH
807
A
HOH
32
3
HOH
HOH
808
A
HOH
127
3
HOH
HOH
809
A
HOH
129
3
HOH
HOH
810
A
HOH
10
3
HOH
HOH
811
A
HOH
146
3
HOH
HOH
812
A
HOH
21
3
HOH
HOH
813
A
HOH
197
3
HOH
HOH
814
A
HOH
94
3
HOH
HOH
815
A
HOH
163
3
HOH
HOH
816
A
HOH
169
3
HOH
HOH
817
A
HOH
188
3
HOH
HOH
818
A
HOH
70
3
HOH
HOH
819
A
HOH
114
3
HOH
HOH
820
A
HOH
159
3
HOH
HOH
821
A
HOH
49
3
HOH
HOH
822
A
HOH
168
3
HOH
HOH
823
A
HOH
254
3
HOH
HOH
824
A
HOH
96
3
HOH
HOH
825
A
HOH
216
3
HOH
HOH
826
A
HOH
6
3
HOH
HOH
827
A
HOH
252
3
HOH
HOH
828
A
HOH
230
3
HOH
HOH
829
A
HOH
162
3
HOH
HOH
830
A
HOH
78
3
HOH
HOH
831
A
HOH
52
3
HOH
HOH
832
A
HOH
121
3
HOH
HOH
833
A
HOH
260
3
HOH
HOH
834
A
HOH
200
3
HOH
HOH
835
A
HOH
269
3
HOH
HOH
836
A
HOH
41
3
HOH
HOH
837
A
HOH
223
3
HOH
HOH
838
A
HOH
1
3
HOH
HOH
839
A
HOH
119
3
HOH
HOH
840
A
HOH
91
3
HOH
HOH
841
A
HOH
224
3
HOH
HOH
842
A
HOH
195
3
HOH
HOH
843
A
HOH
48
3
HOH
HOH
844
A
HOH
170
3
HOH
HOH
845
A
HOH
266
3
HOH
HOH
846
A
HOH
37
3
HOH
HOH
847
A
HOH
95
3
HOH
HOH
848
A
HOH
105
3
HOH
HOH
849
A
HOH
103
3
HOH
HOH
850
A
HOH
140
3
HOH
HOH
851
A
HOH
191
3
HOH
HOH
852
A
HOH
33
3
HOH
HOH
853
A
HOH
3
3
HOH
HOH
854
A
HOH
227
3
HOH
HOH
855
A
HOH
30
3
HOH
HOH
856
A
HOH
249
3
HOH
HOH
857
A
HOH
274
3
HOH
HOH
858
A
HOH
26
3
HOH
HOH
859
A
HOH
38
3
HOH
HOH
860
A
HOH
181
3
HOH
HOH
861
A
HOH
226
3
HOH
HOH
862
A
HOH
84
3
HOH
HOH
863
A
HOH
261
3
HOH
HOH
864
A
HOH
133
3
HOH
HOH
865
A
HOH
81
3
HOH
HOH
866
A
HOH
183
3
HOH
HOH
867
A
HOH
18
3
HOH
HOH
868
A
HOH
160
3
HOH
HOH
869
A
HOH
42
3
HOH
HOH
870
A
HOH
151
3
HOH
HOH
871
A
HOH
144
3
HOH
HOH
872
A
HOH
148
3
HOH
HOH
873
A
HOH
73
3
HOH
HOH
874
A
HOH
177
3
HOH
HOH
875
A
HOH
112
3
HOH
HOH
876
A
HOH
27
3
HOH
HOH
877
A
HOH
72
3
HOH
HOH
878
A
HOH
46
3
HOH
HOH
879
A
HOH
16
3
HOH
HOH
880
A
HOH
147
3
HOH
HOH
881
A
HOH
87
3
HOH
HOH
882
A
HOH
24
3
HOH
HOH
883
A
HOH
150
3
HOH
HOH
884
A
HOH
44
3
HOH
HOH
885
A
HOH
66
3
HOH
HOH
886
A
HOH
178
3
HOH
HOH
887
A
HOH
182
3
HOH
HOH
888
A
HOH
17
3
HOH
HOH
889
A
HOH
83
3
HOH
HOH
890
A
HOH
15
3
HOH
HOH
891
A
HOH
113
3
HOH
HOH
892
A
HOH
50
3
HOH
HOH
893
A
HOH
11
3
HOH
HOH
894
A
HOH
29
3
HOH
HOH
895
A
HOH
22
3
HOH
HOH
896
A
HOH
28
3
HOH
HOH
897
A
HOH
65
3
HOH
HOH
898
A
HOH
256
3
HOH
HOH
899
A
HOH
250
3
HOH
HOH
900
A
HOH
240
3
HOH
HOH
901
A
HOH
102
3
HOH
HOH
902
A
HOH
270
3
HOH
HOH
903
A
HOH
149
3
HOH
HOH
904
A
HOH
62
3
HOH
HOH
905
A
HOH
271
3
HOH
HOH
906
A
HOH
5
3
HOH
HOH
907
A
HOH
158
3
HOH
HOH
908
A
HOH
143
3
HOH
HOH
909
A
HOH
79
3
HOH
HOH
910
A
HOH
118
3
HOH
HOH
911
A
HOH
109
3
HOH
HOH
912
A
HOH
135
3
HOH
HOH
913
A
HOH
77
3
HOH
HOH
914
A
HOH
187
3
HOH
HOH
915
A
HOH
93
3
HOH
HOH
916
A
HOH
12
3
HOH
HOH
917
A
HOH
116
3
HOH
HOH
918
A
HOH
246
3
HOH
HOH
919
A
HOH
67
3
HOH
HOH
920
A
HOH
19
3
HOH
HOH
921
A
HOH
193
3
HOH
HOH
922
A
HOH
211
3
HOH
HOH
923
A
HOH
4
3
HOH
HOH
924
A
HOH
172
3
HOH
HOH
925
A
HOH
174
3
HOH
HOH
926
A
HOH
31
3
HOH
HOH
927
A
HOH
262
3
HOH
HOH
928
A
HOH
43
3
HOH
HOH
929
A
HOH
51
3
HOH
HOH
930
A
HOH
145
3
HOH
HOH
931
A
HOH
7
3
HOH
HOH
932
A
HOH
107
3
HOH
HOH
933
A
HOH
56
3
HOH
HOH
934
A
HOH
217
3
HOH
HOH
935
A
HOH
9
3
HOH
HOH
936
A
HOH
180
3
HOH
HOH
937
A
HOH
23
3
HOH
HOH
938
A
HOH
2
3
HOH
HOH
939
A
HOH
206
3
HOH
HOH
940
A
HOH
61
3
HOH
HOH
941
A
HOH
101
3
HOH
HOH
942
A
HOH
213
3
HOH
HOH
943
A
HOH
138
3
HOH
HOH
944
A
HOH
69
3
HOH
HOH
945
A
HOH
239
3
HOH
HOH
946
A
HOH
25
3
HOH
HOH
947
A
HOH
166
3
HOH
HOH
948
A
HOH
97
3
HOH
HOH
949
A
HOH
110
3
HOH
HOH
950
A
HOH
255
3
HOH
HOH
951
A
HOH
125
3
HOH
HOH
952
A
HOH
122
3
HOH
HOH
953
A
HOH
263
3
HOH
HOH
954
A
HOH
90
3
HOH
HOH
955
A
HOH
264
3
HOH
HOH
956
A
HOH
154
3
HOH
HOH
957
A
HOH
126
3
HOH
HOH
958
A
HOH
212
3
HOH
HOH
959
A
HOH
244
3
HOH
HOH
960
A
HOH
173
3
HOH
HOH
961
A
HOH
100
3
HOH
HOH
962
A
HOH
89
3
HOH
HOH
963
A
HOH
34
3
HOH
HOH
964
A
HOH
219
3
HOH
HOH
965
A
HOH
202
3
HOH
HOH
966
A
HOH
60
3
HOH
HOH
967
A
HOH
165
3
HOH
HOH
968
A
HOH
199
3
HOH
HOH
969
A
HOH
259
3
HOH
HOH
970
A
HOH
68
3
HOH
HOH
971
A
HOH
45
3
HOH
HOH
972
A
HOH
156
3
HOH
HOH
973
A
HOH
111
3
HOH
HOH
974
A
HOH
13
3
HOH
HOH
975
A
HOH
222
3
HOH
HOH
976
A
HOH
253
3
HOH
HOH
977
A
HOH
64
3
HOH
HOH
978
A
HOH
234
3
HOH
HOH
979
A
HOH
115
3
HOH
HOH
980
A
HOH
63
3
HOH
HOH
981
A
HOH
251
3
HOH
HOH
982
A
HOH
123
3
HOH
HOH
983
A
HOH
137
3
HOH
HOH
984
A
HOH
171
3
HOH
HOH
985
A
HOH
225
3
HOH
HOH
986
A
HOH
275
3
HOH
HOH
987
A
HOH
153
3
HOH
HOH
988
A
HOH
58
3
HOH
HOH
989
A
HOH
167
3
HOH
HOH
990
A
HOH
40
3
HOH
HOH
991
A
HOH
238
3
HOH
HOH
992
A
HOH
136
3
HOH
HOH
993
A
HOH
258
3
HOH
HOH
994
A
HOH
257
3
HOH
HOH
995
A
HOH
39
3
HOH
HOH
996
A
HOH
74
3
HOH
HOH
997
A
HOH
80
3
HOH
HOH
998
A
HOH
248
3
HOH
HOH
999
A
HOH
268
3
HOH
HOH
1000
A
HOH
247
3
HOH
HOH
1001
A
HOH
98
3
HOH
HOH
1002
A
HOH
20
3
HOH
HOH
1003
A
HOH
57
3
HOH
HOH
1004
A
HOH
204
3
HOH
HOH
1005
A
HOH
55
3
HOH
HOH
1006
A
HOH
104
3
HOH
HOH
1007
A
HOH
128
3
HOH
HOH
1008
A
HOH
229
3
HOH
HOH
1009
A
HOH
185
3
HOH
HOH
1010
A
HOH
210
3
HOH
HOH
1011
A
HOH
276
3
HOH
HOH
1012
A
HOH
215
3
HOH
HOH
1013
A
HOH
164
3
HOH
HOH
1014
A
HOH
236
3
HOH
HOH
1015
A
HOH
198
3
HOH
HOH
1016
A
HOH
157
3
HOH
HOH
1017
A
HOH
134
3
HOH
HOH
1018
A
HOH
209
3
HOH
HOH
1019
A
HOH
235
3
HOH
HOH
1020
A
HOH
54
3
HOH
HOH
1021
A
HOH
53
3
HOH
HOH
1022
A
HOH
184
3
HOH
HOH
1023
A
HOH
86
3
HOH
HOH
1024
A
HOH
92
3
HOH
HOH
1025
A
HOH
75
3
HOH
HOH
1026
A
HOH
76
3
HOH
HOH
1027
A
HOH
245
3
HOH
HOH
1028
A
HOH
124
3
HOH
HOH
1029
A
HOH
108
3
HOH
HOH
1030
A
HOH
88
3
HOH
HOH
1031
A
HOH
232
3
HOH
HOH
1032
A
HOH
192
3
HOH
HOH
1033
A
HOH
176
3
HOH
HOH
1034
A
HOH
194
3
HOH
HOH
1035
A
HOH
117
3
HOH
HOH
1036
A
HOH
59
3
HOH
HOH
1037
A
HOH
35
3
HOH
HOH
1038
A
HOH
218
3
HOH
HOH
1039
A
HOH
131
3
HOH
HOH
1040
A
HOH
237
3
HOH
HOH
1041
A
HOH
141
3
HOH
HOH
1042
A
HOH
186
3
HOH
HOH
1043
A
HOH
106
3
HOH
HOH
1044
A
HOH
241
3
HOH
HOH
1045
A
HOH
272
3
HOH
HOH
1046
A
HOH
208
3
HOH
HOH
1047
A
HOH
233
3
HOH
HOH
1048
A
HOH
82
3
HOH
HOH
1049
A
HOH
189
3
HOH
HOH
1050
A
HOH
190
3
HOH
HOH
1051
A
HOH
175
3
HOH
HOH
1052
A
HOH
179
3
HOH
HOH
1053
A
HOH
139
3
HOH
HOH
1054
A
HOH
242
3
HOH
HOH
1055
A
HOH
243
3
HOH
HOH
1056
A
HOH
228
3
HOH
HOH
1057
A
HOH
273
3
HOH
HOH
1058
A
HOH
99
3
HOH
HOH
1059
A
HOH
214
3
HOH
HOH
1060
A
HOH
201
3
HOH
HOH
1061
A
HOH
231
3
HOH
HOH
1062
A
HOH
205
3
HOH
HOH
1063
A
HOH
221
3
HOH
HOH
1064
A
HOH
196
3
HOH
HOH
1065
A
HOH
71
3
HOH
HOH
1066
A
HOH
85
3
HOH
HOH
1067
A
HOH
155
3
HOH
HOH
1068
A
HOH
120
3
HOH
HOH
1069
A
HOH
142
3
HOH
HOH
1070
A
HOH
152
3
HOH
HOH
1071
A
HOH
161
3
HOH
HOH
1072
A
HOH
130
3
HOH
HOH
1073
A
HOH
203
3
HOH
HOH
1074
A
HOH
207
3
HOH
HOH
1075
A
HOH
220
3
HOH
HOH
1076
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
ARG
13
n
13
ARG
13
A
LEU
14
n
14
LEU
14
A
ARG
15
n
15
ARG
15
A
GLN
16
n
16
GLN
16
A
PRO
17
n
17
PRO
17
A
ILE
18
n
18
ILE
18
A
VAL
19
n
19
VAL
19
A
VAL
20
n
20
VAL
20
A
VAL
21
n
21
VAL
21
A
LEU
22
n
22
LEU
22
A
GLY
23
n
23
GLY
23
A
HIS
24
n
24
HIS
24
A
VAL
25
n
25
VAL
25
A
ASP
26
n
26
ASP
26
A
HIS
27
n
27
HIS
27
A
GLY
28
n
28
GLY
28
A
LYS
29
n
29
LYS
29
A
THR
30
n
30
THR
30
A
THR
31
n
31
THR
31
A
LEU
32
n
32
LEU
32
A
LEU
33
n
33
LEU
33
A
ASP
34
n
34
ASP
34
A
LYS
35
n
35
LYS
35
A
ILE
36
n
36
ILE
36
A
ARG
37
n
37
ARG
37
A
ARG
38
n
38
ARG
38
A
THR
39
n
39
THR
39
A
ALA
40
n
40
ALA
40
A
VAL
41
n
41
VAL
41
A
ALA
42
n
42
ALA
42
A
ALA
43
n
43
ALA
43
A
LYS
44
n
44
LYS
44
A
GLU
45
n
45
GLU
45
A
ALA
46
n
46
ALA
46
A
GLY
47
n
47
GLY
47
A
GLY
48
n
48
GLY
48
A
ILE
49
n
49
ILE
49
A
THR
50
n
50
THR
50
A
GLN
51
n
51
GLN
51
A
HIS
52
n
52
HIS
52
A
ILE
53
n
53
ILE
53
A
GLY
54
n
54
GLY
54
A
ALA
55
n
55
ALA
55
A
SER
56
n
56
SER
56
A
ILE
57
n
57
ILE
57
A
VAL
58
n
58
VAL
58
A
PRO
59
n
59
PRO
59
A
ALA
60
n
60
ALA
60
A
ASP
61
n
61
ASP
61
A
VAL
62
n
62
VAL
62
A
ILE
63
n
63
ILE
63
A
GLU
64
n
64
GLU
64
A
LYS
65
n
65
LYS
65
A
ILE
66
n
66
ILE
66
A
ALA
67
n
67
ALA
67
A
GLU
68
n
68
GLU
68
A
PRO
69
n
69
PRO
69
A
LEU
70
n
70
LEU
70
A
LYS
71
n
71
LYS
71
A
LYS
72
n
72
LYS
72
A
VAL
73
n
73
VAL
73
A
ILE
74
n
74
ILE
74
A
PRO
75
n
75
PRO
75
A
VAL
76
n
76
VAL
76
A
LYS
77
n
77
LYS
77
A
LEU
78
n
78
LEU
78
A
VAL
79
n
79
VAL
79
A
ILE
80
n
80
ILE
80
A
PRO
81
n
81
PRO
81
A
GLY
82
n
82
GLY
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
PHE
85
n
85
PHE
85
A
ILE
86
n
86
ILE
86
A
ASP
87
n
87
ASP
87
A
THR
88
n
88
THR
88
A
PRO
89
n
89
PRO
89
A
GLY
90
n
90
GLY
90
A
HIS
91
n
91
HIS
91
A
GLU
92
n
92
GLU
92
A
LEU
93
n
93
LEU
93
A
PHE
94
n
94
PHE
94
A
SER
95
n
95
SER
95
A
ASN
96
n
96
ASN
96
A
LEU
97
n
97
LEU
97
A
ARG
98
n
98
ARG
98
A
ARG
99
n
99
ARG
99
A
ARG
100
n
100
ARG
100
A
GLY
101
n
101
GLY
101
A
GLY
102
n
102
GLY
102
A
SER
103
n
103
SER
103
A
VAL
104
n
104
VAL
104
A
ALA
105
n
105
ALA
105
A
ASP
106
n
106
ASP
106
A
PHE
107
n
107
PHE
107
A
ALA
108
n
108
ALA
108
A
ILE
109
n
109
ILE
109
A
LEU
110
n
110
LEU
110
A
VAL
111
n
111
VAL
111
A
VAL
112
n
112
VAL
112
A
ASP
113
n
113
ASP
113
A
ILE
114
n
114
ILE
114
A
MET
115
n
115
MET
115
A
GLU
116
n
116
GLU
116
A
GLY
117
n
117
GLY
117
A
PHE
118
n
118
PHE
118
A
LYS
119
n
119
LYS
119
A
PRO
120
n
120
PRO
120
A
GLN
121
n
121
GLN
121
A
THR
122
n
122
THR
122
A
TYR
123
n
123
TYR
123
A
GLU
124
n
124
GLU
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
GLU
127
n
127
GLU
127
A
LEU
128
n
128
LEU
128
A
LEU
129
n
129
LEU
129
A
LYS
130
n
130
LYS
130
A
GLU
131
n
131
GLU
131
A
ARG
132
n
132
ARG
132
A
ARG
133
n
133
ARG
133
A
VAL
134
n
134
VAL
134
A
PRO
135
n
135
PRO
135
A
PHE
136
n
136
PHE
136
A
LEU
137
n
137
LEU
137
A
ILE
138
n
138
ILE
138
A
ALA
139
n
139
ALA
139
A
ALA
140
n
140
ALA
140
A
ASN
141
n
141
ASN
141
A
LYS
142
n
142
LYS
142
A
ILE
143
n
143
ILE
143
A
ASP
144
n
144
ASP
144
A
ARG
145
n
145
ARG
145
A
ILE
146
n
146
ILE
146
A
PRO
147
n
147
PRO
147
A
GLY
148
n
148
GLY
148
A
TRP
149
n
149
TRP
149
A
LYS
150
n
150
LYS
150
A
PRO
151
n
151
PRO
151
A
ASN
152
n
152
ASN
152
A
PRO
153
n
153
PRO
153
A
ASP
154
n
154
ASP
154
A
ALA
155
n
155
ALA
155
A
PRO
156
n
156
PRO
156
A
PHE
157
n
157
PHE
157
A
ILE
158
n
158
ILE
158
A
GLU
159
n
159
GLU
159
A
THR
160
n
160
THR
160
A
ILE
161
n
161
ILE
161
A
ARG
162
n
162
ARG
162
A
ARG
163
n
163
ARG
163
A
GLN
164
n
164
GLN
164
A
ASP
165
n
165
ASP
165
A
PRO
166
n
166
PRO
166
A
LYS
167
n
167
LYS
167
A
VAL
168
n
168
VAL
168
A
ARG
169
n
169
ARG
169
A
GLU
170
n
170
GLU
170
A
ILE
171
n
171
ILE
171
A
LEU
172
n
172
LEU
172
A
GLU
173
n
173
GLU
173
A
GLN
174
n
174
GLN
174
A
ARG
175
n
175
ARG
175
A
VAL
176
n
176
VAL
176
A
TYR
177
n
177
TYR
177
A
GLU
178
n
178
GLU
178
A
ILE
179
n
179
ILE
179
A
VAL
180
n
180
VAL
180
A
GLY
181
n
181
GLY
181
A
LYS
182
n
182
LYS
182
A
MET
183
n
183
MET
183
A
TYR
184
n
184
TYR
184
A
GLU
185
n
185
GLU
185
A
ALA
186
n
186
ALA
186
A
GLY
187
n
187
GLY
187
A
LEU
188
n
188
LEU
188
A
PRO
189
n
189
PRO
189
A
ALA
190
n
190
ALA
190
A
GLU
191
n
191
GLU
191
A
LEU
192
n
192
LEU
192
A
PHE
193
n
193
PHE
193
A
THR
194
n
194
THR
194
A
ARG
195
n
195
ARG
195
A
ILE
196
n
196
ILE
196
A
LYS
197
n
197
LYS
197
A
ASP
198
n
198
ASP
198
A
PHE
199
n
199
PHE
199
A
ARG
200
n
200
ARG
200
A
ARG
201
n
201
ARG
201
A
LYS
202
n
202
LYS
202
A
ILE
203
n
203
ILE
203
A
ALA
204
n
204
ALA
204
A
ILE
205
n
205
ILE
205
A
VAL
206
n
206
VAL
206
A
PRO
207
n
207
PRO
207
A
VAL
208
n
208
VAL
208
A
SER
209
n
209
SER
209
A
ALA
210
n
210
ALA
210
A
ARG
211
n
211
ARG
211
A
THR
212
n
212
THR
212
A
GLY
213
n
213
GLY
213
A
GLU
214
n
214
GLU
214
A
GLY
215
n
215
GLY
215
A
ILE
216
n
216
ILE
216
A
PRO
217
n
217
PRO
217
A
GLU
218
n
218
GLU
218
A
LEU
219
n
219
LEU
219
A
LEU
220
n
220
LEU
220
A
ALA
221
n
221
ALA
221
A
VAL
222
n
222
VAL
222
A
LEU
223
n
223
LEU
223
A
ALA
224
n
224
ALA
224
A
GLY
225
n
225
GLY
225
A
LEU
226
n
226
LEU
226
A
THR
227
n
227
THR
227
A
GLN
228
n
228
GLN
228
A
THR
229
n
229
THR
229
A
TYR
230
n
230
TYR
230
A
LEU
231
n
231
LEU
231
A
LYS
232
n
232
LYS
232
A
GLU
233
n
233
GLU
233
A
ARG
234
n
234
ARG
234
A
LEU
235
n
235
LEU
235
A
ARG
236
n
236
ARG
236
A
TYR
237
n
237
TYR
237
A
ALA
238
n
238
ALA
238
A
GLU
239
n
239
GLU
239
A
GLY
240
n
240
GLY
240
A
PRO
241
n
241
PRO
241
A
ALA
242
n
242
ALA
242
A
LYS
243
n
243
LYS
243
A
GLY
244
n
244
GLY
244
A
VAL
245
n
245
VAL
245
A
VAL
246
n
246
VAL
246
A
LEU
247
n
247
LEU
247
A
GLU
248
n
248
GLU
248
A
VAL
249
n
249
VAL
249
A
LYS
250
n
250
LYS
250
A
GLU
251
n
251
GLU
251
A
MET
252
n
252
MET
252
A
GLN
253
n
253
GLN
253
A
GLY
254
n
254
GLY
254
A
PHE
255
n
255
PHE
255
A
GLY
256
n
256
GLY
256
A
THR
257
n
257
THR
257
A
VAL
258
n
258
VAL
258
A
VAL
259
n
259
VAL
259
A
ASP
260
n
260
ASP
260
A
ALA
261
n
261
ALA
261
A
VAL
262
n
262
VAL
262
A
ILE
263
n
263
ILE
263
A
TYR
264
n
264
TYR
264
A
ASP
265
n
265
ASP
265
A
GLY
266
n
266
GLY
266
A
VAL
267
n
267
VAL
267
A
LEU
268
n
268
LEU
268
A
LYS
269
n
269
LYS
269
A
LYS
270
n
270
LYS
270
A
GLU
271
n
271
GLU
271
A
ASP
272
n
272
ASP
272
A
ILE
273
n
273
ILE
273
A
ILE
274
n
274
ILE
274
A
VAL
275
n
275
VAL
275
A
VAL
276
n
276
VAL
276
A
GLY
277
n
277
GLY
277
A
GLY
278
n
278
GLY
278
A
ARG
279
n
279
ARG
279
A
GLU
280
n
280
GLU
280
A
GLY
281
n
281
GLY
281
A
PRO
282
n
282
PRO
282
A
ILE
283
n
283
ILE
283
A
VAL
284
n
284
VAL
284
A
THR
285
n
285
THR
285
A
ARG
286
n
286
ARG
286
A
VAL
287
n
287
VAL
287
A
ARG
288
n
288
ARG
288
A
ALA
289
n
289
ALA
289
A
LEU
290
n
290
LEU
290
A
LEU
291
n
291
LEU
291
A
MET
292
n
292
MET
292
A
PRO
293
n
293
PRO
293
A
ALA
294
n
294
ALA
294
A
PRO
295
n
295
PRO
295
A
LEU
296
n
296
LEU
296
A
GLN
297
n
297
GLN
297
A
ASP
298
n
298
ASP
298
A
ILE
299
n
299
ILE
299
A
ARG
300
n
300
ARG
300
A
SER
301
n
301
SER
301
A
ARG
302
n
302
ARG
302
A
GLU
303
n
303
GLU
303
A
ALA
304
n
304
ALA
304
A
ARG
305
n
305
ARG
305
A
PHE
306
n
306
PHE
306
A
VAL
307
n
307
VAL
307
A
GLN
308
n
308
GLN
308
A
VAL
309
n
309
VAL
309
A
ASP
310
n
310
ASP
310
A
ARG
311
n
311
ARG
311
A
VAL
312
n
312
VAL
312
A
TYR
313
n
313
TYR
313
A
ALA
314
n
314
ALA
314
A
ALA
315
n
315
ALA
315
A
ALA
316
n
316
ALA
316
A
GLY
317
n
317
GLY
317
A
VAL
318
n
318
VAL
318
A
ARG
319
n
319
ARG
319
A
ILE
320
n
320
ILE
320
A
ALA
321
n
321
ALA
321
A
ALA
322
n
322
ALA
322
A
PRO
323
n
323
PRO
323
A
GLY
324
n
324
GLY
324
A
LEU
325
n
325
LEU
325
A
ASP
326
n
326
ASP
326
A
ASP
327
n
327
ASP
327
A
VAL
328
n
328
VAL
328
A
ILE
329
n
329
ILE
329
A
ALA
330
n
330
ALA
330
A
GLY
331
n
331
GLY
331
A
SER
332
n
332
SER
332
A
PRO
333
n
333
PRO
333
A
ILE
334
n
334
ILE
334
A
TYR
335
n
335
TYR
335
A
ALA
336
n
336
ALA
336
A
ALA
337
n
337
ALA
337
A
GLU
338
n
338
GLU
338
A
SER
339
n
339
SER
339
A
GLU
340
n
340
GLU
340
A
GLU
341
n
341
GLU
341
A
GLU
342
n
342
GLU
342
A
ALA
343
n
343
ALA
343
A
ARG
344
n
344
ARG
344
A
LYS
345
n
345
LYS
345
A
LEU
346
n
346
LEU
346
A
MET
347
n
347
MET
347
A
GLU
348
n
348
GLU
348
A
ALA
349
n
349
ALA
349
A
VAL
350
n
350
VAL
350
A
GLN
351
n
351
GLN
351
A
ARG
352
n
352
ARG
352
A
GLU
353
n
353
GLU
353
A
ILE
354
n
354
ILE
354
A
GLU
355
n
355
GLU
355
A
GLU
356
n
356
GLU
356
A
LEU
357
n
357
LEU
357
A
ARG
358
n
358
ARG
358
A
PHE
359
n
359
PHE
359
A
ARG
360
n
360
ARG
360
A
THR
361
n
361
THR
361
A
GLU
362
n
362
GLU
362
A
ASN
363
n
363
ASN
363
A
ILE
364
n
364
ILE
364
A
GLY
365
n
365
GLY
365
A
VAL
366
n
366
VAL
366
A
VAL
367
n
367
VAL
367
A
VAL
368
n
368
VAL
368
A
LYS
369
n
369
LYS
369
A
ALA
370
n
370
ALA
370
A
ASP
371
n
371
ASP
371
A
THR
372
n
372
THR
372
A
LEU
373
n
373
LEU
373
A
GLY
374
n
374
GLY
374
A
THR
375
n
375
THR
375
A
LEU
376
n
376
LEU
376
A
GLU
377
n
377
GLU
377
A
ALA
378
n
378
ALA
378
A
LEU
379
n
379
LEU
379
A
VAL
380
n
380
VAL
380
A
GLU
381
n
381
GLU
381
A
ALA
382
n
382
ALA
382
A
LEU
383
n
383
LEU
383
A
ARG
384
n
384
ARG
384
A
ARG
385
n
385
ARG
385
A
ARG
386
n
386
ARG
386
A
GLY
387
n
387
GLY
387
A
VAL
388
n
388
VAL
388
A
PRO
389
n
389
PRO
389
A
VAL
390
n
390
VAL
390
A
ARG
391
n
391
ARG
391
A
LEU
392
n
392
LEU
392
A
ALA
393
n
393
ALA
393
A
ASP
394
n
394
ASP
394
A
ILE
395
n
395
ILE
395
A
GLY
396
n
396
GLY
396
A
PRO
397
n
397
PRO
397
A
VAL
398
n
398
VAL
398
A
SER
399
n
399
SER
399
A
ARG
400
n
400
ARG
400
A
SER
401
n
401
SER
401
A
ASP
402
n
402
ASP
402
A
VAL
403
n
403
VAL
403
A
LEU
404
n
404
LEU
404
A
ASP
405
n
405
ASP
405
A
ALA
406
n
406
ALA
406
A
ALA
407
n
407
ALA
407
A
VAL
408
n
408
VAL
408
A
THR
409
n
409
THR
409
A
ARG
410
n
410
ARG
410
A
LYS
411
n
411
LYS
411
A
ILE
412
n
412
ILE
412
A
ASP
413
n
413
ASP
413
A
PRO
414
n
414
PRO
414
A
TYR
415
n
415
TYR
415
A
LEU
416
n
416
LEU
416
A
GLY
417
n
417
GLY
417
A
VAL
418
n
418
VAL
418
A
VAL
419
n
419
VAL
419
A
LEU
420
n
420
LEU
420
A
ALA
421
n
421
ALA
421
A
PHE
422
n
422
PHE
422
A
ASN
423
n
423
ASN
423
A
VAL
424
n
424
VAL
424
A
LYS
425
n
425
LYS
425
A
VAL
426
n
426
VAL
426
A
LEU
427
n
427
LEU
427
A
PRO
428
n
428
PRO
428
A
GLU
429
n
429
GLU
429
A
ALA
430
n
430
ALA
430
A
GLU
431
n
431
GLU
431
A
GLU
432
n
432
GLU
432
A
GLU
433
n
433
GLU
433
A
ALA
434
n
434
ALA
434
A
SER
435
n
435
SER
435
A
ARG
436
n
436
ARG
436
A
ALA
437
n
437
ALA
437
A
GLY
438
n
438
GLY
438
A
VAL
439
n
439
VAL
439
A
LYS
440
n
440
LYS
440
A
ILE
441
n
441
ILE
441
A
PHE
442
n
442
PHE
442
A
ARG
443
n
443
ARG
443
A
GLU
444
n
444
GLU
444
A
SER
445
n
445
SER
445
A
MET
446
n
446
MET
446
A
ILE
447
n
447
ILE
447
A
TYR
448
n
448
TYR
448
A
LYS
449
n
449
LYS
449
A
LEU
450
n
450
LEU
450
A
ILE
451
n
451
ILE
451
A
GLU
452
n
452
GLU
452
A
ASP
453
n
453
ASP
453
A
TYR
454
n
454
TYR
454
A
GLU
455
n
455
GLU
455
A
GLU
456
n
456
GLU
456
A
TRP
457
n
457
TRP
457
A
VAL
458
n
458
VAL
458
A
LYS
459
n
459
LYS
459
A
LYS
460
n
460
LYS
460
A
GLU
461
n
461
GLU
461
A
LYS
462
n
462
LYS
462
A
GLU
463
n
463
GLU
463
A
ALA
464
n
464
ALA
464
A
GLU
465
n
465
GLU
465
A
ARG
466
n
466
ARG
466
A
LEU
467
n
467
LEU
467
A
LYS
468
n
468
LYS
468
A
ALA
469
n
469
ALA
469
A
LEU
470
n
470
LEU
470
A
ASN
471
n
471
ASN
471
A
SER
472
n
472
SER
472
A
LEU
473
n
473
LEU
473
A
ILE
474
n
474
ILE
474
A
ARG
475
n
475
ARG
475
A
PRO
476
n
476
PRO
476
A
GLY
477
n
477
GLY
477
A
LYS
478
n
478
LYS
478
A
PHE
479
n
479
PHE
479
A
ARG
480
n
480
ARG
480
A
ILE
481
n
481
ILE
481
A
LEU
482
n
482
LEU
482
A
PRO
483
n
483
PRO
483
A
GLY
484
n
484
GLY
484
A
TYR
485
n
485
TYR
485
A
VAL
486
n
486
VAL
486
A
PHE
487
n
487
PHE
487
A
ARG
488
n
488
ARG
488
A
ARG
489
n
489
ARG
489
A
SER
490
n
490
SER
490
A
ASP
491
n
491
ASP
491
A
PRO
492
n
492
PRO
492
A
ALA
493
n
493
ALA
493
A
ILE
494
n
494
ILE
494
A
VAL
495
n
495
VAL
495
A
GLY
496
n
496
GLY
496
A
VAL
497
n
497
VAL
497
A
GLU
498
n
498
GLU
498
A
VAL
499
n
499
VAL
499
A
LEU
500
n
500
LEU
500
A
GLY
501
n
501
GLY
501
A
GLY
502
n
502
GLY
502
A
VAL
503
n
503
VAL
503
A
ILE
504
n
504
ILE
504
A
ARG
505
n
505
ARG
505
A
PRO
506
n
506
PRO
506
A
GLY
507
n
507
GLY
507
A
TYR
508
n
508
TYR
508
A
PRO
509
n
509
PRO
509
A
VAL
510
n
510
VAL
510
A
MET
511
n
511
MET
511
A
ASP
512
n
512
ASP
512
A
SER
513
n
513
SER
513
A
GLN
514
n
514
GLN
514
A
GLY
515
n
515
GLY
515
A
ARG
516
n
516
ARG
516
A
GLU
517
n
517
GLU
517
A
LEU
518
n
518
LEU
518
A
GLY
519
n
519
GLY
519
A
ARG
520
n
520
ARG
520
A
ILE
521
n
521
ILE
521
A
MET
522
n
522
MET
522
A
ALA
523
n
523
ALA
523
A
ILE
524
n
524
ILE
524
A
LYS
525
n
525
LYS
525
A
ASP
526
n
526
ASP
526
A
ARG
527
n
527
ARG
527
A
ASP
528
n
528
ASP
528
A
ARG
529
n
529
ARG
529
A
SER
530
n
530
SER
530
A
LEU
531
n
531
LEU
531
A
GLU
532
n
532
GLU
532
A
GLU
533
n
533
GLU
533
A
ALA
534
n
534
ALA
534
A
ARG
535
n
535
ARG
535
A
LEU
536
n
536
LEU
536
A
GLY
537
n
537
GLY
537
A
ALA
538
n
538
ALA
538
A
ALA
539
n
539
ALA
539
A
VAL
540
n
540
VAL
540
A
ALA
541
n
541
ALA
541
A
VAL
542
n
542
VAL
542
A
SER
543
n
543
SER
543
A
ILE
544
n
544
ILE
544
A
GLN
545
n
545
GLN
545
A
GLY
546
n
546
GLY
546
A
ARG
547
n
547
ARG
547
A
ILE
548
n
548
ILE
548
A
LEU
549
n
549
LEU
549
A
ILE
550
n
550
ILE
550
A
GLY
551
n
551
GLY
551
A
ARG
552
n
552
ARG
552
A
HIS
553
n
553
HIS
553
A
ALA
554
n
554
ALA
554
A
ASN
555
n
555
ASN
555
A
GLU
556
n
556
GLU
556
A
GLY
557
n
557
GLY
557
A
ASP
558
n
558
ASP
558
A
ILE
559
n
559
ILE
559
A
LEU
560
n
560
LEU
560
A
TYR
561
n
561
TYR
561
A
THR
562
n
562
THR
562
A
ASN
563
n
563
ASN
563
A
VAL
564
n
564
VAL
564
A
PRO
565
n
565
PRO
565
A
ALA
566
n
566
ALA
566
A
GLN
567
n
567
GLN
567
A
HIS
568
n
568
HIS
568
A
ALA
569
n
569
ALA
569
A
TYR
570
n
570
TYR
570
A
LYS
571
n
571
LYS
571
A
ILE
572
n
572
ILE
572
A
LEU
573
n
573
LEU
573
A
THR
574
n
574
THR
574
A
GLU
575
n
575
GLU
575
A
PHE
576
n
576
PHE
576
A
LYS
577
n
577
LYS
577
A
ASP
578
n
578
ASP
578
A
LEU
579
n
579
LEU
579
A
VAL
580
n
580
VAL
580
A
SER
581
n
581
SER
581
A
LYS
582
n
582
LYS
582
A
ASP
583
n
583
ASP
583
A
GLU
584
n
584
GLU
584
A
LEU
585
n
585
LEU
585
A
ASP
586
n
586
ASP
586
A
VAL
587
n
587
VAL
587
A
LEU
588
n
588
LEU
588
A
ARG
589
n
589
ARG
589
A
GLU
590
n
590
GLU
590
A
ILE
591
n
591
ILE
591
A
ALA
592
n
592
ALA
592
A
GLU
593
n
593
GLU
593
A
ILE
594
n
594
ILE
594
A
LYS
595
n
595
LYS
595
A
ARG
596
n
596
ARG
596
A
ARG
597
n
597
ARG
597
A
ALA
598
n
598
ALA
598
A
ALA
599
n
599
ALA
599
A
ASP
600
n
600
ASP
600
A
HIS
601
n
601
HIS
601
A
GLU
602
n
602
GLU
602
A
TYR
603
n
603
TYR
603
A
ASN
604
n
604
ASN
604
A
LYS
605
n
605
LYS
605
A
VAL
606
n
606
VAL
606
A
LEU
607
n
607
LEU
607
A
LEU
608
n
608
LEU
608
A
ARG
609
n
609
ARG
609
A
LEU
610
n
610
LEU
610
A
n
611
611
A
n
612
612
A
n
613
613
A
n
614
614
A
n
615
615
A
n
616
616
A
n
617
617
A
n
618
618
A
n
619
619
A
n
620
620
A
n
621
621
A
n
622
622
A
n
623
623
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
56
A
N
SER
56
A
O
PHE
85
A
O
PHE
85
A
O
LEU
84
A
O
LEU
84
A
N
VAL
19
A
N
VAL
19
A
N
LEU
22
A
N
LEU
22
A
O
ILE
109
A
O
ILE
109
A
N
LEU
110
A
N
LEU
110
A
O
LEU
137
A
O
LEU
137
A
N
ILE
138
A
N
ILE
138
A
O
VAL
206
A
O
VAL
206
A
O
ILE
203
A
O
ILE
203
A
N
GLU
191
A
N
GLU
191
A
N
ARG
99
A
N
ARG
99
A
O
GLY
102
A
O
GLY
102
A
O
ILE
283
A
O
ILE
283
A
N
VAL
276
A
N
VAL
276
A
N
ILE
273
A
N
ILE
273
A
O
ALA
337
A
O
ALA
337
A
O
ILE
334
A
O
ILE
334
A
N
GLY
244
A
N
GLY
244
A
N
LYS
250
A
N
LYS
250
A
O
VAL
258
A
O
VAL
258
A
N
VAL
259
A
N
VAL
259
A
O
ILE
320
A
O
ILE
320
A
O
ARG
319
A
O
ARG
319
A
N
LEU
291
A
N
LEU
291
A
N
MET
292
A
N
MET
292
A
O
VAL
307
A
O
VAL
307
A
N
LEU
268
A
N
LEU
268
A
O
VAL
312
A
O
VAL
312
A
N
PHE
359
A
N
PHE
359
A
O
ALA
393
A
O
ALA
393
A
O
LEU
392
A
O
LEU
392
A
N
VAL
368
A
N
VAL
368
A
N
LYS
369
A
N
LYS
369
A
O
PHE
422
A
O
PHE
422
A
N
VAL
419
A
N
VAL
419
A
O
PHE
442
A
O
PHE
442
A
O
ALA
534
A
O
ALA
534
A
N
ILE
504
A
N
ILE
504
A
N
ALA
493
A
N
ALA
493
A
O
ILE
544
A
O
ILE
544
A
O
GLN
545
A
O
GLN
545
A
N
ARG
520
A
N
ARG
520
A
O
GLY
519
A
O
GLY
519
A
N
VAL
510
A
N
VAL
510
A
N
MET
511
A
N
MET
511
A
O
TYR
561
A
O
TYR
561
A
O
LEU
560
A
O
LEU
560
A
N
PHE
479
A
N
PHE
479
A
N
LEU
482
A
N
LEU
482
A
O
GLY
496
A
O
GLY
496
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
GLY
3
A
GLY
3
1
Y
1
A
ASP
4
A
ASP
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
GLY
6
A
GLY
6
1
Y
1
A
GLY
7
A
GLY
7
1
Y
1
A
GLY
8
A
GLY
8
1
Y
1
A
ASP
9
A
ASP
9
1
Y
1
A
GLY
10
A
GLY
10
1
Y
1
A
GLU
11
A
GLU
11
1
Y
1
A
ARG
12
A
ARG
12
1
Y
1
A
LYS
611
A
LYS
611
1
Y
1
A
ILE
612
A
ILE
612
1
Y
1
A
LYS
613
A
LYS
613
1
Y
1
A
ARG
614
A
ARG
614
1
Y
1
A
VAL
615
A
VAL
615
1
Y
1
A
SER
616
A
SER
616
1
Y
1
A
GLN
617
A
GLN
617
1
Y
1
A
HIS
618
A
HIS
618
1
Y
1
A
HIS
619
A
HIS
619
1
Y
1
A
HIS
620
A
HIS
620
1
Y
1
A
HIS
621
A
HIS
621
1
Y
1
A
HIS
622
A
HIS
622
1
Y
1
A
HIS
623
A
HIS
623
1
Y
1
A
GLU
45
136.35
-87.68
1
A
ALA
46
-144.69
-79.17
1
A
LYS
142
73.43
33.20
1
A
GLU
271
75.71
-6.39
1
A
LEU
536
-35.82
127.63
1
A
ILE
548
-39.59
128.68
29.995
0.10
0.00
-0.03
-0.14
0.00
0.04
0.951
0.926
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.24293
0.19424
0.19668
1.90
37.21
2486
47238
5.0
93.48
4.570
0.128
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.165
0.156
0.80
0.80
1.20
1G7S
MAXIMUM LIKELIHOOD
MASK
1.90
37.21
276
4996
28
0
4692
0.010
0.019
4796
0.002
0.020
4892
1.446
2.001
6488
0.924
3.000
11219
6.343
5.000
597
32.530
22.512
207
15.139
15.000
881
15.148
15.000
57
0.074
0.200
750
0.005
0.021
5288
0.002
0.020
1027
1.621
2.757
2391
1.621
2.756
2390
2.538
4.127
2987
2.538
4.128
2988
2.116
3.147
2405
2.118
3.149
2397
3.459
4.572
3489
5.080
22.100
5296
5.011
21.952
5215
0.369
0.327
1.951
162
3083
20
82.65
1.9
37.21
5FG3
50764
0.065
1
12.3
3.5
95.4
0.305
1.90
2.02
3.7
1
3.0
88.1
refinement
REFMAC
5.8.0135
data collection
XDS
phasing
MOLREP
data reduction
XDS
data scaling
XSCALE
model building
Coot
Crystal structure of GDP-bound aIF5B from Aeropyrum pernix
1
N
N
2
N
N
3
N
N
A
GLY
28
A
GLY
28
HELX_P
A
LYS
44
A
LYS
44
1
AA1
17
A
ALA
60
A
ALA
60
HELX_P
A
ALA
67
A
ALA
67
1
AA2
8
A
GLU
68
A
GLU
68
HELX_P
A
LYS
71
A
LYS
71
5
AA3
4
A
GLY
90
A
GLY
90
HELX_P
A
LEU
97
A
LEU
97
1
AA4
8
A
LYS
119
A
LYS
119
HELX_P
A
ARG
132
A
ARG
132
1
AA5
14
A
LYS
142
A
LYS
142
HELX_P
A
ILE
146
A
ILE
146
5
AA6
5
A
PRO
156
A
PRO
156
HELX_P
A
ARG
162
A
ARG
162
1
AA7
7
A
ASP
165
A
ASP
165
HELX_P
A
ALA
186
A
ALA
186
1
AA8
22
A
THR
194
A
THR
194
HELX_P
A
ILE
196
A
ILE
196
5
AA9
3
A
GLY
215
A
GLY
215
HELX_P
A
LEU
231
A
LEU
231
1
AB1
17
A
ASP
298
A
ASP
298
HELX_P
A
ARG
302
A
ARG
302
5
AB2
5
A
SER
339
A
SER
339
HELX_P
A
ARG
358
A
ARG
358
1
AB3
20
A
THR
372
A
THR
372
HELX_P
A
GLY
387
A
GLY
387
1
AB4
16
A
SER
399
A
SER
399
HELX_P
A
ASP
413
A
ASP
413
1
AB5
15
A
PRO
414
A
PRO
414
HELX_P
A
LEU
416
A
LEU
416
5
AB6
3
A
LEU
427
A
LEU
427
HELX_P
A
GLY
438
A
GLY
438
1
AB7
12
A
MET
446
A
MET
446
HELX_P
A
ASN
471
A
ASN
471
1
AB8
26
A
PRO
565
A
PRO
565
HELX_P
A
PHE
576
A
PHE
576
1
AB9
12
A
SER
581
A
SER
581
HELX_P
A
ALA
598
A
ALA
598
1
AC1
18
A
ASP
600
A
ASP
600
HELX_P
A
LEU
610
A
LEU
610
1
AC2
11
TRANSLATION
Translation initiaton factor, GTPase, Ribosomal subunit joining, Crenarchaea, TRANSLATION
A
LYS
44
A
LYS
44
1
A
GLU
45
A
GLU
45
10.91
A
ALA
314
A
ALA
314
1
A
ALA
315
A
ALA
315
0.30
A
ASP
491
A
ASP
491
1
A
PRO
492
A
PRO
492
-13.65
IF2P_AERPE
UNP
1
1
Q9Y9B3
MAGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKLVI
PGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKERRVPFLIAANKIDRIPGWKPNPDAPFIET
IRRQDPKVREILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIPELLAVLAGLTQTYLKERLRYAEG
PAKGVVLEVKEMQGFGTVVDAVIYDGVLKKEDIIVVGGREGPIVTRVRALLMPAPLQDIRSREARFVQVDRVYAAAGVRI
AAPGLDDVIAGSPIYAAESEEEARKLMEAVQREIEELRFRTENIGVVVKADTLGTLEALVEALRRRGVPVRLADIGPVSR
SDVLDAAVTRKIDPYLGVVLAFNVKVLPEAEEEASRAGVKIFRESMIYKLIEDYEEWVKKEKEAERLKALNSLIRPGKFR
ILPGYVFRRSDPAIVGVEVLGGVIRPGYPVMDSQGRELGRIMAIKDRDRSLEEARLGAAVAVSIQGRILIGRHANEGDIL
YTNVPAQHAYKILTEFKDLVSKDELDVLREIAEIKRRAADHEYNKVLLRLKIKRVSQ
1
617
5FG3
1
617
Q9Y9B3
A
1
1
617
1
expression tag
HIS
618
5FG3
A
Q9Y9B3
UNP
618
1
expression tag
HIS
619
5FG3
A
Q9Y9B3
UNP
619
1
expression tag
HIS
620
5FG3
A
Q9Y9B3
UNP
620
1
expression tag
HIS
621
5FG3
A
Q9Y9B3
UNP
621
1
expression tag
HIS
622
5FG3
A
Q9Y9B3
UNP
622
1
expression tag
HIS
623
5FG3
A
Q9Y9B3
UNP
623
7
2
8
2
5
8
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
55
A
ALA
55
A
PRO
59
A
PRO
59
A
GLY
82
A
GLY
82
A
ILE
86
A
ILE
86
A
ILE
18
A
ILE
18
A
LEU
22
A
LEU
22
A
PHE
107
A
PHE
107
A
ASP
113
A
ASP
113
A
PHE
136
A
PHE
136
A
ASN
141
A
ASN
141
A
ILE
203
A
ILE
203
A
PRO
207
A
PRO
207
A
ALA
190
A
ALA
190
A
LEU
192
A
LEU
192
A
ARG
98
A
ARG
98
A
ARG
99
A
ARG
99
A
GLY
102
A
GLY
102
A
SER
103
A
SER
103
A
GLY
281
A
GLY
281
A
ARG
286
A
ARG
286
A
ILE
273
A
ILE
273
A
GLY
278
A
GLY
278
A
PRO
333
A
PRO
333
A
ALA
337
A
ALA
337
A
LYS
243
A
LYS
243
A
MET
252
A
MET
252
A
GLY
256
A
GLY
256
A
ASP
265
A
ASP
265
A
ALA
316
A
ALA
316
A
ALA
321
A
ALA
321
A
ALA
289
A
ALA
289
A
PRO
293
A
PRO
293
A
PHE
306
A
PHE
306
A
VAL
309
A
VAL
309
A
VAL
267
A
VAL
267
A
LYS
269
A
LYS
269
A
ARG
311
A
ARG
311
A
TYR
313
A
TYR
313
A
PHE
359
A
PHE
359
A
ARG
360
A
ARG
360
A
VAL
390
A
VAL
390
A
ILE
395
A
ILE
395
A
VAL
366
A
VAL
366
A
ALA
370
A
ALA
370
A
VAL
418
A
VAL
418
A
PHE
422
A
PHE
422
A
LYS
440
A
LYS
440
A
GLU
444
A
GLU
444
A
ALA
534
A
ALA
534
A
ARG
535
A
ARG
535
A
ALA
493
A
ALA
493
A
ILE
504
A
ILE
504
A
ALA
539
A
ALA
539
A
GLN
545
A
GLN
545
A
GLU
517
A
GLU
517
A
LYS
525
A
LYS
525
A
PRO
509
A
PRO
509
A
MET
511
A
MET
511
A
ILE
559
A
ILE
559
A
THR
562
A
THR
562
A
GLY
477
A
GLY
477
A
ARG
488
A
ARG
488
A
ALA
493
A
ALA
493
A
ILE
504
A
ILE
504
binding site for residue GDP A 701
A
GDP
701
Software
17
A
HIS
24
A
HIS
24
17
1_555
A
ASP
26
A
ASP
26
17
1_555
A
HIS
27
A
HIS
27
17
1_555
A
GLY
28
A
GLY
28
17
1_555
A
LYS
29
A
LYS
29
17
1_555
A
THR
30
A
THR
30
17
1_555
A
THR
31
A
THR
31
17
1_555
A
ASN
141
A
ASN
141
17
1_555
A
LYS
142
A
LYS
142
17
1_555
A
ASP
144
A
ASP
144
17
1_555
A
ARG
145
A
ARG
145
17
1_555
A
SER
209
A
SER
209
17
1_555
A
ALA
210
A
ALA
210
17
1_555
A
ARG
211
A
ARG
211
17
1_555
A
HOH
802
C
HOH
17
1_555
A
HOH
874
C
HOH
17
1_555
A
HOH
899
C
HOH
17
1_555
4
P 1 21 1