0.023350
0.000000
0.000000
0.000000
0.021819
0.000000
0.000000
0.000000
0.015143
0.00000
0.00000
0.00000
Xu, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
42.826
45.832
66.038
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C8 H16 N2 O3
188.224
n
N(6)-ACETYLLYSINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
O
N
15
N
C
N
16
N
C
N
17
N
N
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
C
N
22
S
C
N
23
N
N
N
24
N
C
N
25
N
O
N
26
N
O
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
C
N
49
N
C
N
50
N
N
N
51
N
C
N
52
N
N
N
53
N
N
N
54
N
O
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
N
N
71
S
C
N
72
N
C
N
73
N
O
N
74
N
C
N
75
N
C
N
76
N
O
N
77
N
N
N
78
N
O
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
N
N
88
S
C
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
C
N
93
N
O
N
94
N
O
N
95
N
O
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
N
N
104
R
C
N
105
N
C
N
106
N
O
N
107
N
C
N
108
N
S
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
N
N
118
S
C
N
119
N
C
N
120
N
O
N
121
N
C
N
122
N
C
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
O
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
N
C
N
158
N
C
N
159
N
O
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
Y
171
N
C
Y
172
N
N
Y
173
N
C
Y
174
N
C
Y
175
N
N
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
S
C
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
N
N
235
S
C
N
236
N
C
N
237
N
O
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
N
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
S
N
266
N
C
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
O
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
R
C
N
338
N
O
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
N
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
N
388
N
O
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
N
406
N
C
N
407
N
C
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
doub
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
Y
168
N
sing
Y
169
N
doub
Y
170
N
doub
N
171
N
sing
Y
172
N
sing
N
173
N
sing
Y
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
Y
276
N
doub
Y
277
N
sing
Y
278
N
sing
N
279
N
sing
Y
280
N
doub
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
sing
Y
354
N
doub
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
UK
FEBS J.
1742-4658
10.1111/febs.14198
28815970
Structural insight into CBP bromodomain-mediated recognition of acetylated histone H3K56ac
2017
10.2210/pdb5gh9/pdb
pdb_00005gh9
100
1
PIXEL
2015-06-12
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.9776
1.0
BL19U1
SSRF
0.9776
SYNCHROTRON
SSRF BEAMLINE BL19U1
14217.365
CREB-binding protein
UNP residues 1081-1196
1
man
polymer
1721.979
Histone H3
UNP residues 45-58
1
syn
polymer
18.015
water
131
nat
water
no
no
HMRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVW
LMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSL
HMRKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVW
LMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSL
A
polypeptide(L)
no
yes
GTVALREIRRYQ(ALY)S
GTVALREIRRYQKS
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
118
CREBBP, CBP
9606
Homo sapiens
866768
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
'BL21-Gold(DE3)pLysS AG'
Biological sequence
1
2.23
39.45
VAPOR DIFFUSION, SITTING DROP
7.5
0.05 M Cadmium sulfate hydrate, 0.1 M HEPES, 1.0 M Sodium acetate trihydrate,
293
citation
citation_author
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
chem_comp_atom
chem_comp_bond
repository
Initial release
Database references
Data collection
Database references
Refinement description
Data collection
1
0
2017-06-21
1
1
2017-08-30
1
2
2023-11-08
1
3
2023-11-15
_citation.country
_citation.journal_abbrev
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
N
PDBJ
Y
PDBJ
2016-06-19
REL
REL
HOH
water
9606
Human
Homo sapiens
sample
1
14
4OUI
PDB
experimental model
HOH
1
3
HOH
HOH
1201
A
HOH
76
3
HOH
HOH
1202
A
HOH
142
3
HOH
HOH
1203
A
HOH
61
3
HOH
HOH
1204
A
HOH
107
3
HOH
HOH
1205
A
HOH
63
3
HOH
HOH
1206
A
HOH
2
3
HOH
HOH
1207
A
HOH
69
3
HOH
HOH
1208
A
HOH
70
3
HOH
HOH
1209
A
HOH
157
3
HOH
HOH
1210
A
HOH
87
3
HOH
HOH
1211
A
HOH
64
3
HOH
HOH
1212
A
HOH
161
3
HOH
HOH
1213
A
HOH
60
3
HOH
HOH
1214
A
HOH
83
3
HOH
HOH
1215
A
HOH
74
3
HOH
HOH
1216
A
HOH
25
3
HOH
HOH
1217
A
HOH
37
3
HOH
HOH
1218
A
HOH
36
3
HOH
HOH
1219
A
HOH
10
3
HOH
HOH
1220
A
HOH
50
3
HOH
HOH
1221
A
HOH
27
3
HOH
HOH
1222
A
HOH
11
3
HOH
HOH
1223
A
HOH
105
3
HOH
HOH
1224
A
HOH
30
3
HOH
HOH
1225
A
HOH
8
3
HOH
HOH
1226
A
HOH
156
3
HOH
HOH
1227
A
HOH
16
3
HOH
HOH
1228
A
HOH
133
3
HOH
HOH
1229
A
HOH
41
3
HOH
HOH
1230
A
HOH
6
3
HOH
HOH
1231
A
HOH
3
3
HOH
HOH
1232
A
HOH
139
3
HOH
HOH
1233
A
HOH
21
3
HOH
HOH
1234
A
HOH
28
3
HOH
HOH
1235
A
HOH
141
3
HOH
HOH
1236
A
HOH
52
3
HOH
HOH
1237
A
HOH
79
3
HOH
HOH
1238
A
HOH
137
3
HOH
HOH
1239
A
HOH
24
3
HOH
HOH
1240
A
HOH
51
3
HOH
HOH
1241
A
HOH
62
3
HOH
HOH
1242
A
HOH
17
3
HOH
HOH
1243
A
HOH
86
3
HOH
HOH
1244
A
HOH
73
3
HOH
HOH
1245
A
HOH
12
3
HOH
HOH
1246
A
HOH
5
3
HOH
HOH
1247
A
HOH
42
3
HOH
HOH
1248
A
HOH
9
3
HOH
HOH
1249
A
HOH
136
3
HOH
HOH
1250
A
HOH
4
3
HOH
HOH
1251
A
HOH
48
3
HOH
HOH
1252
A
HOH
38
3
HOH
HOH
1253
A
HOH
144
3
HOH
HOH
1254
A
HOH
56
3
HOH
HOH
1255
A
HOH
130
3
HOH
HOH
1256
A
HOH
55
3
HOH
HOH
1257
A
HOH
45
3
HOH
HOH
1258
A
HOH
66
3
HOH
HOH
1259
A
HOH
85
3
HOH
HOH
1260
A
HOH
98
3
HOH
HOH
1261
A
HOH
54
3
HOH
HOH
1262
A
HOH
26
3
HOH
HOH
1263
A
HOH
59
3
HOH
HOH
1264
A
HOH
46
3
HOH
HOH
1265
A
HOH
49
3
HOH
HOH
1266
A
HOH
18
3
HOH
HOH
1267
A
HOH
23
3
HOH
HOH
1268
A
HOH
20
3
HOH
HOH
1269
A
HOH
33
3
HOH
HOH
1270
A
HOH
88
3
HOH
HOH
1271
A
HOH
132
3
HOH
HOH
1272
A
HOH
14
3
HOH
HOH
1273
A
HOH
152
3
HOH
HOH
1274
A
HOH
22
3
HOH
HOH
1275
A
HOH
146
3
HOH
HOH
1276
A
HOH
82
3
HOH
HOH
1277
A
HOH
162
3
HOH
HOH
1278
A
HOH
89
3
HOH
HOH
1279
A
HOH
32
3
HOH
HOH
1280
A
HOH
15
3
HOH
HOH
1281
A
HOH
153
3
HOH
HOH
1282
A
HOH
117
3
HOH
HOH
1283
A
HOH
7
3
HOH
HOH
1284
A
HOH
114
3
HOH
HOH
1285
A
HOH
149
3
HOH
HOH
1286
A
HOH
78
3
HOH
HOH
1287
A
HOH
13
3
HOH
HOH
1288
A
HOH
147
3
HOH
HOH
1289
A
HOH
148
3
HOH
HOH
1290
A
HOH
145
3
HOH
HOH
1291
A
HOH
112
3
HOH
HOH
1292
A
HOH
127
3
HOH
HOH
1293
A
HOH
140
3
HOH
HOH
1294
A
HOH
155
3
HOH
HOH
1295
A
HOH
47
3
HOH
HOH
1296
A
HOH
143
3
HOH
HOH
1297
A
HOH
35
3
HOH
HOH
1298
A
HOH
39
3
HOH
HOH
1299
A
HOH
159
3
HOH
HOH
1300
A
HOH
128
3
HOH
HOH
1301
A
HOH
113
3
HOH
HOH
1302
A
HOH
65
3
HOH
HOH
1303
A
HOH
135
3
HOH
HOH
1304
A
HOH
129
3
HOH
HOH
1305
A
HOH
43
3
HOH
HOH
1306
A
HOH
44
3
HOH
HOH
1307
A
HOH
151
3
HOH
HOH
1308
A
HOH
75
3
HOH
HOH
1309
A
HOH
84
3
HOH
HOH
1310
A
HOH
116
3
HOH
HOH
1311
A
HOH
68
3
HOH
HOH
1312
A
HOH
72
3
HOH
HOH
1313
A
HOH
118
3
HOH
HOH
1314
A
HOH
150
3
HOH
HOH
1315
A
HOH
111
3
HOH
HOH
1316
A
HOH
120
3
HOH
HOH
1317
A
HOH
104
3
HOH
HOH
1318
A
HOH
40
3
HOH
HOH
101
B
HOH
71
3
HOH
HOH
102
B
HOH
154
3
HOH
HOH
103
B
HOH
53
3
HOH
HOH
104
B
HOH
34
3
HOH
HOH
105
B
HOH
126
3
HOH
HOH
106
B
HOH
67
3
HOH
HOH
107
B
HOH
29
3
HOH
HOH
108
B
HOH
131
3
HOH
HOH
109
B
HOH
134
3
HOH
HOH
110
B
HOH
58
3
HOH
HOH
111
B
HOH
97
3
HOH
HOH
112
B
HOH
160
3
HOH
HOH
113
B
n
1
1079
A
n
2
1080
A
n
3
1081
A
n
4
1082
A
n
5
1083
A
ILE
1084
n
6
ILE
1084
A
PHE
1085
n
7
PHE
1085
A
LYS
1086
n
8
LYS
1086
A
PRO
1087
n
9
PRO
1087
A
GLU
1088
n
10
GLU
1088
A
GLU
1089
n
11
GLU
1089
A
LEU
1090
n
12
LEU
1090
A
ARG
1091
n
13
ARG
1091
A
GLN
1092
n
14
GLN
1092
A
ALA
1093
n
15
ALA
1093
A
LEU
1094
n
16
LEU
1094
A
MET
1095
n
17
MET
1095
A
PRO
1096
n
18
PRO
1096
A
THR
1097
n
19
THR
1097
A
LEU
1098
n
20
LEU
1098
A
GLU
1099
n
21
GLU
1099
A
ALA
1100
n
22
ALA
1100
A
LEU
1101
n
23
LEU
1101
A
TYR
1102
n
24
TYR
1102
A
ARG
1103
n
25
ARG
1103
A
GLN
1104
n
26
GLN
1104
A
ASP
1105
n
27
ASP
1105
A
PRO
1106
n
28
PRO
1106
A
GLU
1107
n
29
GLU
1107
A
SER
1108
n
30
SER
1108
A
LEU
1109
n
31
LEU
1109
A
PRO
1110
n
32
PRO
1110
A
PHE
1111
n
33
PHE
1111
A
ARG
1112
n
34
ARG
1112
A
GLN
1113
n
35
GLN
1113
A
PRO
1114
n
36
PRO
1114
A
VAL
1115
n
37
VAL
1115
A
ASP
1116
n
38
ASP
1116
A
PRO
1117
n
39
PRO
1117
A
GLN
1118
n
40
GLN
1118
A
LEU
1119
n
41
LEU
1119
A
LEU
1120
n
42
LEU
1120
A
GLY
1121
n
43
GLY
1121
A
ILE
1122
n
44
ILE
1122
A
PRO
1123
n
45
PRO
1123
A
ASP
1124
n
46
ASP
1124
A
TYR
1125
n
47
TYR
1125
A
PHE
1126
n
48
PHE
1126
A
ASP
1127
n
49
ASP
1127
A
ILE
1128
n
50
ILE
1128
A
VAL
1129
n
51
VAL
1129
A
LYS
1130
n
52
LYS
1130
A
ASN
1131
n
53
ASN
1131
A
PRO
1132
n
54
PRO
1132
A
MET
1133
n
55
MET
1133
A
ASP
1134
n
56
ASP
1134
A
LEU
1135
n
57
LEU
1135
A
SER
1136
n
58
SER
1136
A
THR
1137
n
59
THR
1137
A
ILE
1138
n
60
ILE
1138
A
LYS
1139
n
61
LYS
1139
A
ARG
1140
n
62
ARG
1140
A
LYS
1141
n
63
LYS
1141
A
LEU
1142
n
64
LEU
1142
A
ASP
1143
n
65
ASP
1143
A
THR
1144
n
66
THR
1144
A
GLY
1145
n
67
GLY
1145
A
GLN
1146
n
68
GLN
1146
A
TYR
1147
n
69
TYR
1147
A
GLN
1148
n
70
GLN
1148
A
GLU
1149
n
71
GLU
1149
A
PRO
1150
n
72
PRO
1150
A
TRP
1151
n
73
TRP
1151
A
GLN
1152
n
74
GLN
1152
A
TYR
1153
n
75
TYR
1153
A
VAL
1154
n
76
VAL
1154
A
ASP
1155
n
77
ASP
1155
A
ASP
1156
n
78
ASP
1156
A
VAL
1157
n
79
VAL
1157
A
TRP
1158
n
80
TRP
1158
A
LEU
1159
n
81
LEU
1159
A
MET
1160
n
82
MET
1160
A
PHE
1161
n
83
PHE
1161
A
ASN
1162
n
84
ASN
1162
A
ASN
1163
n
85
ASN
1163
A
ALA
1164
n
86
ALA
1164
A
TRP
1165
n
87
TRP
1165
A
LEU
1166
n
88
LEU
1166
A
TYR
1167
n
89
TYR
1167
A
ASN
1168
n
90
ASN
1168
A
ARG
1169
n
91
ARG
1169
A
LYS
1170
n
92
LYS
1170
A
THR
1171
n
93
THR
1171
A
SER
1172
n
94
SER
1172
A
ARG
1173
n
95
ARG
1173
A
VAL
1174
n
96
VAL
1174
A
TYR
1175
n
97
TYR
1175
A
LYS
1176
n
98
LYS
1176
A
PHE
1177
n
99
PHE
1177
A
CYS
1178
n
100
CYS
1178
A
SER
1179
n
101
SER
1179
A
LYS
1180
n
102
LYS
1180
A
LEU
1181
n
103
LEU
1181
A
ALA
1182
n
104
ALA
1182
A
GLU
1183
n
105
GLU
1183
A
VAL
1184
n
106
VAL
1184
A
PHE
1185
n
107
PHE
1185
A
GLU
1186
n
108
GLU
1186
A
GLN
1187
n
109
GLN
1187
A
GLU
1188
n
110
GLU
1188
A
ILE
1189
n
111
ILE
1189
A
ASP
1190
n
112
ASP
1190
A
PRO
1191
n
113
PRO
1191
A
VAL
1192
n
114
VAL
1192
A
MET
1193
n
115
MET
1193
A
GLN
1194
n
116
GLN
1194
A
SER
1195
n
117
SER
1195
A
LEU
1196
n
118
LEU
1196
A
n
1
79
B
n
2
80
B
n
3
81
B
n
4
82
B
n
5
83
B
n
6
84
B
n
7
85
B
n
8
86
B
ARG
87
n
9
ARG
87
B
ARG
88
n
10
ARG
88
B
TYR
89
n
11
TYR
89
B
GLN
90
n
12
GLN
90
B
ALY
91
n
13
ALY
91
B
SER
92
n
14
SER
92
B
author_and_software_defined_assembly
PISA
2
dimeric
1080
-4
7050
B
ALY
91
modified residue
B
ALY
13
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HIS
1079
A
HIS
1
1
Y
1
A
MET
1080
A
MET
2
1
Y
1
A
ARG
1081
A
ARG
3
1
Y
1
A
LYS
1082
A
LYS
4
1
Y
1
A
LYS
1083
A
LYS
5
1
Y
1
B
GLY
79
B
GLY
1
1
Y
1
B
THR
80
B
THR
2
1
Y
1
B
VAL
81
B
VAL
3
1
Y
1
B
ALA
82
B
ALA
4
1
Y
1
B
LEU
83
B
LEU
5
1
Y
1
B
ARG
84
B
ARG
6
1
Y
1
B
GLU
85
B
GLU
7
1
Y
1
B
ILE
86
B
ILE
8
1
Y
1
A
A
O
O
HOH
HOH
1265
1269
2.16
0.1764
0.1454
0.1469
1.451
37.652
1199
23538
5.09
99.43
0.11
1
FREE R-VALUE
1.35
MOLECULAR REPLACEMENT
15.50
0.90
1.11
4OUI
ML
FLAT BULK SOLVENT MODEL
1.451
37.652
131
1145
0
0
1014
0.005
1060
0.835
1439
18.567
417
0.074
148
0.006
189
0.2064
0.1491
1.5089
115
2451
99.00
0.2193
0.1330
1.5776
136
2448
100.00
0.1692
0.1253
1.6607
128
2460
100.00
0.1705
0.1281
1.7648
132
2439
99.00
0.1716
0.1272
1.9010
119
2492
100.00
0.1588
0.1339
2.0923
135
2454
99.00
0.1569
0.1363
2.3950
154
2480
100.00
0.1743
0.1574
3.0173
150
2491
99.00
0.1902
0.1580
37.6651
130
2624
99.00
12.930
1.450
50.000
5GH9
24495
0.061
1
33.113
8.500
5.900
99.700
0.547
1.450
1.530
1
5.500
99.700
0.480
1.530
1.550
1
5.500
99.900
0.454
1.550
1.580
1
5.100
99.700
0.424
1.580
1.620
1
5.800
99.800
0.341
1.620
1.650
1
6.200
99.800
0.317
1.650
1.690
1
6.200
99.500
0.283
1.690
1.730
1
6.200
100.000
0.234
1.730
1.780
1
6.200
99.400
0.187
1.780
1.830
1
6.200
99.700
0.155
1.830
1.890
1
6.100
99.800
0.128
1.890
1.960
1
5.700
99.500
0.101
1.960
2.040
1
5.600
99.800
0.081
2.040
2.130
1
6.400
99.900
0.066
2.130
2.240
1
6.300
99.900
0.058
2.240
2.380
1
6.300
99.900
0.050
2.380
2.560
1
6.100
99.700
0.042
2.560
2.820
1
5.500
99.200
0.036
2.820
3.230
1
6.100
99.900
0.031
3.230
4.070
1
6.100
100.000
0.030
4.070
50.000
1
5.500
98.900
refinement
PHENIX
(1.10.1_2155: ???)
data scaling
HKL-2000
data extraction
PDB_EXTRACT
3.20
data reduction
HKL-2000
phasing
MOLREP
N
Crystal structure of CBP Bromodomain with H3K56ac peptide
1
N
N
2
N
N
3
N
N
3
N
N
A
LYS
1086
A
LYS
8
HELX_P
A
ARG
1103
A
ARG
25
1
AA1
18
A
SER
1108
A
SER
30
HELX_P
A
ARG
1112
A
ARG
34
5
AA2
5
A
ASP
1116
A
ASP
38
HELX_P
A
GLY
1121
A
GLY
43
1
AA3
6
A
ASP
1124
A
ASP
46
HELX_P
A
VAL
1129
A
VAL
51
1
AA4
6
A
ASP
1134
A
ASP
56
HELX_P
A
THR
1144
A
THR
66
1
AA5
11
A
GLU
1149
A
GLU
71
HELX_P
A
ASN
1168
A
ASN
90
1
AA6
20
A
SER
1172
A
SER
94
HELX_P
A
LEU
1196
A
LEU
118
1
AA7
25
covale
1.330
both
B
GLN
90
B
C
GLN
12
1_555
B
ALY
91
B
N
ALY
13
1_555
covale
1.331
both
B
ALY
91
B
C
ALY
13
1_555
B
SER
92
B
N
SER
14
1_555
TRANSCRIPTION
H3K56ac Bromodomain, TRANSCRIPTION
A
ASP
1105
A
ASP
27
1
A
PRO
1106
A
PRO
28
12.34
CBP_HUMAN
UNP
1
1081
Q92793
RKKIFKPEELRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLM
FNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSL
K7EMV3_HUMAN
UNP
2
45
K7EMV3
GTVALREIRRYQKS
1081
1196
5GH9
1081
1196
Q92793
A
1
3
118
45
58
5GH9
79
92
K7EMV3
B
2
1
14
1
expression tag
HIS
1079
5GH9
A
Q92793
UNP
1
1
expression tag
MET
1080
5GH9
A
Q92793
UNP
2
19
P 21 21 21