0.035680
0.000000
0.004849
0.000000
0.021507
0.000000
0.000000
0.000000
0.023384
0.00000
0.00000
0.00000
Gao, S.
Pan, M.
Zheng, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
97.74
90.00
28.027
46.497
43.157
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2
89.093
D-ALANINE
D-peptide linking
C6 H15 N4 O2 1
175.209
D-ARGININE
D-peptide linking
C4 H7 N O4
133.103
D-ASPARTIC ACID
D-peptide linking
C5 H9 N O4
147.129
D-GLUTAMIC ACID
D-peptide linking
C5 H10 N2 O3
146.144
D-GLUTAMINE
D-peptide linking
C6 H10 N3 O2 1
156.162
D-HISTIDINE
D-peptide linking
C6 H13 N O2
131.173
D-ISOLEUCINE
D-peptide linking
C6 H13 N O2
131.173
D-LEUCINE
D-peptide linking
C6 H14 N2 O2
146.188
D-LYSINE
D-peptide linking
C6 H13 N O2
131.173
D-NORLEUCINE
D-peptide linking
C9 H11 N O2
165.189
D-PHENYLALANINE
D-peptide linking
C5 H9 N O2
115.130
D-PROLINE
D-peptide linking
C4 H8 N2 O3
132.118
D-ASPARAGINE
D-peptide linking
C3 H7 N O3
105.093
D-SERINE
D-peptide linking
C4 H9 N O3
119.119
D-THREONINE
D-peptide linking
C9 H11 N O3
181.189
D-TYROSINE
D-peptide linking
C5 H11 N O2
117.146
D-VALINE
D-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
C
N
78
N
O
N
79
N
O
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
N
N
88
R
C
N
89
N
C
N
90
N
C
N
91
N
C
N
92
N
N
N
93
N
C
N
94
N
N
N
95
N
N
N
96
N
C
N
97
N
O
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
N
N
115
R
C
N
116
N
C
N
117
N
O
N
118
N
C
N
119
N
C
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
R
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
O
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
R
C
N
151
N
C
N
152
N
O
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
N
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
R
C
N
171
N
C
N
172
N
O
N
173
N
C
Y
174
N
C
Y
175
N
N
Y
176
N
C
Y
177
N
C
Y
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
N
N
191
R
C
N
192
N
C
N
193
N
O
N
194
R
C
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
R
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
O
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
N
N
235
R
C
N
236
N
C
N
237
N
O
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
N
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
R
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
R
C
N
282
N
C
N
283
N
O
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
R
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
R
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
N
N
328
N
O
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
R
C
N
339
N
C
N
340
N
O
N
341
N
O
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
R
C
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
R
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
R
C
N
394
N
C
N
395
N
C
N
396
N
C
N
397
N
C
N
398
N
O
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
N
N
412
S
C
N
413
N
C
N
414
N
O
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
O
N
419
N
N
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
N
N
432
S
C
N
433
N
C
N
434
N
O
N
435
N
C
N
436
N
C
N
437
N
C
N
438
N
O
N
439
N
O
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
N
N
451
N
C
N
452
N
C
N
453
N
O
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
N
N
461
S
C
N
462
N
C
N
463
N
O
N
464
N
C
Y
465
N
C
Y
466
N
N
Y
467
N
C
Y
468
N
C
Y
469
N
N
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
O
N
482
N
H
N
483
N
H
N
484
N
N
N
485
S
C
N
486
N
C
N
487
N
O
N
488
S
C
N
489
N
C
N
490
N
C
N
491
N
C
N
492
N
O
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
N
N
507
S
C
N
508
N
C
N
509
N
O
N
510
N
C
N
511
N
C
N
512
N
C
N
513
N
C
N
514
N
O
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
N
N
529
S
C
N
530
N
C
N
531
N
O
N
532
N
C
N
533
N
C
N
534
N
C
N
535
N
C
N
536
N
N
N
537
N
O
N
538
N
H
N
539
N
H
N
540
N
H
N
541
N
H
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
N
N
554
S
C
N
555
N
C
N
556
N
O
N
557
N
C
N
558
N
C
N
559
N
S
N
560
N
C
N
561
N
O
N
562
N
H
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
N
N
574
S
C
N
575
N
C
N
576
N
O
N
577
N
C
Y
578
N
C
Y
579
N
C
Y
580
N
C
Y
581
N
C
Y
582
N
C
Y
583
N
C
N
584
N
O
N
585
N
H
N
586
N
H
N
587
N
H
N
588
N
H
N
589
N
H
N
590
N
H
N
591
N
H
N
592
N
H
N
593
N
H
N
594
N
H
N
595
N
H
N
596
N
N
N
597
S
C
N
598
N
C
N
599
N
O
N
600
N
C
N
601
N
C
N
602
N
C
N
603
N
O
N
604
N
H
N
605
N
H
N
606
N
H
N
607
N
H
N
608
N
H
N
609
N
H
N
610
N
H
N
611
N
H
N
612
N
H
N
613
N
N
N
614
S
C
N
615
N
C
N
616
N
O
N
617
N
C
N
618
N
O
N
619
N
O
N
620
N
H
N
621
N
H
N
622
N
H
N
623
N
H
N
624
N
H
N
625
N
H
N
626
N
H
N
627
N
N
N
628
S
C
N
629
N
C
N
630
N
O
N
631
R
C
N
632
N
O
N
633
N
C
N
634
N
O
N
635
N
H
N
636
N
H
N
637
N
H
N
638
N
H
N
639
N
H
N
640
N
H
N
641
N
H
N
642
N
H
N
643
N
H
N
644
N
N
N
645
S
C
N
646
N
C
N
647
N
O
N
648
N
C
Y
649
N
C
Y
650
N
C
Y
651
N
C
Y
652
N
C
Y
653
N
C
Y
654
N
C
N
655
N
O
N
656
N
O
N
657
N
H
N
658
N
H
N
659
N
H
N
660
N
H
N
661
N
H
N
662
N
H
N
663
N
H
N
664
N
H
N
665
N
H
N
666
N
H
N
667
N
H
N
668
N
N
N
669
S
C
N
670
N
C
N
671
N
O
N
672
N
C
N
673
N
C
N
674
N
C
N
675
N
O
N
676
N
H
N
677
N
H
N
678
N
H
N
679
N
H
N
680
N
H
N
681
N
H
N
682
N
H
N
683
N
H
N
684
N
H
N
685
N
H
N
686
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
Y
171
N
sing
Y
172
N
doub
Y
173
N
doub
N
174
N
sing
Y
175
N
sing
N
176
N
sing
Y
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
Y
279
N
doub
Y
280
N
sing
Y
281
N
sing
N
282
N
sing
Y
283
N
doub
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
Y
363
N
doub
Y
364
N
sing
Y
365
N
sing
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
doub
N
370
N
sing
Y
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
doub
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
doub
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
Y
451
N
sing
Y
452
N
doub
Y
453
N
doub
N
454
N
sing
Y
455
N
sing
N
456
N
sing
Y
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
doub
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
doub
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
doub
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
doub
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
sing
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
sing
N
547
N
sing
N
548
N
sing
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
doub
N
555
N
sing
N
556
N
sing
N
557
N
sing
N
558
N
sing
Y
559
N
doub
Y
560
N
sing
Y
561
N
sing
N
562
N
sing
Y
563
N
doub
N
564
N
sing
Y
565
N
doub
N
566
N
sing
Y
567
N
sing
N
568
N
sing
N
569
N
sing
N
570
N
sing
N
571
N
sing
N
572
N
sing
N
573
N
sing
N
574
N
sing
N
575
N
sing
N
576
N
sing
N
577
N
doub
N
578
N
sing
N
579
N
sing
N
580
N
sing
N
581
N
sing
N
582
N
sing
N
583
N
sing
N
584
N
sing
N
585
N
sing
N
586
N
sing
N
587
N
sing
N
588
N
sing
N
589
N
sing
N
590
N
sing
N
591
N
sing
N
592
N
sing
N
593
N
sing
N
594
N
doub
N
595
N
sing
N
596
N
sing
N
597
N
sing
N
598
N
sing
N
599
N
sing
N
600
N
sing
N
601
N
sing
N
602
N
sing
N
603
N
sing
N
604
N
sing
N
605
N
sing
N
606
N
sing
N
607
N
doub
N
608
N
sing
N
609
N
sing
N
610
N
sing
N
611
N
sing
N
612
N
sing
N
613
N
sing
N
614
N
sing
N
615
N
sing
N
616
N
sing
N
617
N
sing
N
618
N
sing
N
619
N
sing
N
620
N
sing
N
621
N
sing
N
622
N
sing
N
623
N
doub
N
624
N
sing
N
625
N
sing
N
626
N
sing
N
627
N
sing
Y
628
N
doub
Y
629
N
sing
Y
630
N
sing
N
631
N
sing
Y
632
N
doub
N
633
N
sing
Y
634
N
doub
N
635
N
sing
Y
636
N
sing
N
637
N
sing
N
638
N
sing
N
639
N
sing
N
640
N
sing
N
641
N
sing
N
642
N
sing
N
643
N
sing
N
644
N
sing
N
645
N
sing
N
646
N
sing
N
647
N
doub
N
648
N
sing
N
649
N
sing
N
650
N
sing
N
651
N
sing
N
652
N
sing
N
653
N
sing
N
654
N
sing
N
655
N
sing
N
656
N
sing
N
657
N
sing
N
658
N
sing
US
J.Am.Chem.Soc.
JACSAT
1520-5126
138
14497
14502
10.1021/jacs.6b09545
27768314
Monomer/Oligomer Quasi-Racemic Protein Crystallography
2016
10.2210/pdb5gog/pdb
pdb_00005gog
100
1
PIXEL
2015-06-04
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.9791
1.0
21-ID-E
APS
0.9791
SYNCHROTRON
APS BEAMLINE 21-ID-E
8576.831
Ubiquitin
1
syn
polymer
8551.744
D-ubiquitin
1
syn
polymer
18.015
water
54
nat
water
no
no
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
A
polypeptide(L)
no
yes
(DNE)(DGN)(DIL)(DPN)(DVA)(DLY)(DTH)(DLE)(DTH)G(DLY)(DTH)(DIL)(DTH)(DLE)(DGL)
(DVA)(DGL)(DPR)(DSN)(DAS)(DTH)(DIL)(DGL)(DSG)(DVA)(DLY)(DAL)(DLY)(DIL)(DGN)(DAS)
(DLY)(DGL)G(DIL)(DPR)(DPR)(DAS)(DGN)(DGN)(DAR)(DLE)(DIL)(DPN)(DAL)G(DLY)(DGN)
(DLE)(DGL)(DAS)G(DAR)(DTH)(DLE)(DSN)(DAS)(DTY)(DSG)(DIL)(DGN)(DLY)(DGL)(DSN)
(DTH)(DLE)(DHI)(DLE)(DVA)(DLE)(DAR)(DLE)(DAR)GG
LQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
B
polypeptide(D)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
1.63
24.60
VAPOR DIFFUSION, SITTING DROP
0.2M Potassium sulfate, 20% PEG 3350
289
database_2
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
chem_comp_atom
chem_comp_bond
repository
Initial release
Database references
Database references
Derived calculations
Data collection
Refinement description
Data collection
1
0
2016-11-02
1
1
2016-11-16
1
2
2022-02-09
1
3
2023-11-08
1
4
2023-11-15
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_oper_list.symmetry_operation
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_2
China
National Basic Research Program of China
2013CB932800
N
PDBJ
Y
PDBJ
2016-07-27
REL
REL
HOH
water
9606
Human
Homo sapiens
sample
1
76
9606
Homo sapiens
sample
1
76
1UBQ
PDB
experimental model
HOH
15
3
HOH
HOH
101
A
HOH
12
3
HOH
HOH
102
A
HOH
22
3
HOH
HOH
103
A
HOH
51
3
HOH
HOH
104
A
HOH
9
3
HOH
HOH
105
A
HOH
1
3
HOH
HOH
106
A
HOH
11
3
HOH
HOH
107
A
HOH
14
3
HOH
HOH
108
A
HOH
8
3
HOH
HOH
109
A
HOH
5
3
HOH
HOH
110
A
HOH
3
3
HOH
HOH
111
A
HOH
13
3
HOH
HOH
112
A
HOH
32
3
HOH
HOH
113
A
HOH
53
3
HOH
HOH
114
A
HOH
35
3
HOH
HOH
115
A
HOH
21
3
HOH
HOH
116
A
HOH
41
3
HOH
HOH
117
A
HOH
6
3
HOH
HOH
118
A
HOH
28
3
HOH
HOH
119
A
HOH
34
3
HOH
HOH
120
A
HOH
17
3
HOH
HOH
121
A
HOH
36
3
HOH
HOH
122
A
HOH
44
3
HOH
HOH
123
A
HOH
25
3
HOH
HOH
124
A
HOH
40
3
HOH
HOH
125
A
HOH
20
3
HOH
HOH
126
A
HOH
16
3
HOH
HOH
127
A
HOH
24
3
HOH
HOH
128
A
HOH
48
3
HOH
HOH
129
A
HOH
49
3
HOH
HOH
130
A
HOH
29
3
HOH
HOH
131
A
HOH
23
3
HOH
HOH
132
A
HOH
46
3
HOH
HOH
101
B
HOH
37
3
HOH
HOH
102
B
HOH
52
3
HOH
HOH
103
B
HOH
27
3
HOH
HOH
104
B
HOH
50
3
HOH
HOH
105
B
HOH
4
3
HOH
HOH
106
B
HOH
2
3
HOH
HOH
107
B
HOH
7
3
HOH
HOH
108
B
HOH
26
3
HOH
HOH
109
B
HOH
42
3
HOH
HOH
110
B
HOH
10
3
HOH
HOH
111
B
HOH
38
3
HOH
HOH
112
B
HOH
43
3
HOH
HOH
113
B
HOH
18
3
HOH
HOH
114
B
HOH
31
3
HOH
HOH
115
B
HOH
19
3
HOH
HOH
116
B
HOH
54
3
HOH
HOH
117
B
HOH
30
3
HOH
HOH
118
B
HOH
33
3
HOH
HOH
119
B
HOH
47
3
HOH
HOH
120
B
HOH
45
3
HOH
HOH
121
B
HOH
39
3
HOH
HOH
122
B
MET
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
ILE
3
n
3
ILE
3
A
PHE
4
n
4
PHE
4
A
VAL
5
n
5
VAL
5
A
LYS
6
n
6
LYS
6
A
THR
7
n
7
THR
7
A
LEU
8
n
8
LEU
8
A
THR
9
n
9
THR
9
A
GLY
10
n
10
GLY
10
A
LYS
11
n
11
LYS
11
A
THR
12
n
12
THR
12
A
ILE
13
n
13
ILE
13
A
THR
14
n
14
THR
14
A
LEU
15
n
15
LEU
15
A
GLU
16
n
16
GLU
16
A
VAL
17
n
17
VAL
17
A
GLU
18
n
18
GLU
18
A
PRO
19
n
19
PRO
19
A
SER
20
n
20
SER
20
A
ASP
21
n
21
ASP
21
A
THR
22
n
22
THR
22
A
ILE
23
n
23
ILE
23
A
GLU
24
n
24
GLU
24
A
ASN
25
n
25
ASN
25
A
VAL
26
n
26
VAL
26
A
LYS
27
n
27
LYS
27
A
ALA
28
n
28
ALA
28
A
LYS
29
n
29
LYS
29
A
ILE
30
n
30
ILE
30
A
GLN
31
n
31
GLN
31
A
ASP
32
n
32
ASP
32
A
LYS
33
n
33
LYS
33
A
GLU
34
n
34
GLU
34
A
GLY
35
n
35
GLY
35
A
ILE
36
n
36
ILE
36
A
PRO
37
n
37
PRO
37
A
PRO
38
n
38
PRO
38
A
ASP
39
n
39
ASP
39
A
GLN
40
n
40
GLN
40
A
GLN
41
n
41
GLN
41
A
ARG
42
n
42
ARG
42
A
LEU
43
n
43
LEU
43
A
ILE
44
n
44
ILE
44
A
PHE
45
n
45
PHE
45
A
ALA
46
n
46
ALA
46
A
GLY
47
n
47
GLY
47
A
LYS
48
n
48
LYS
48
A
GLN
49
n
49
GLN
49
A
LEU
50
n
50
LEU
50
A
GLU
51
n
51
GLU
51
A
ASP
52
n
52
ASP
52
A
GLY
53
n
53
GLY
53
A
ARG
54
n
54
ARG
54
A
THR
55
n
55
THR
55
A
LEU
56
n
56
LEU
56
A
SER
57
n
57
SER
57
A
ASP
58
n
58
ASP
58
A
TYR
59
n
59
TYR
59
A
ASN
60
n
60
ASN
60
A
ILE
61
n
61
ILE
61
A
GLN
62
n
62
GLN
62
A
LYS
63
n
63
LYS
63
A
GLU
64
n
64
GLU
64
A
SER
65
n
65
SER
65
A
THR
66
n
66
THR
66
A
LEU
67
n
67
LEU
67
A
HIS
68
n
68
HIS
68
A
LEU
69
n
69
LEU
69
A
VAL
70
n
70
VAL
70
A
LEU
71
n
71
LEU
71
A
n
72
72
A
LEU
73
n
73
LEU
73
A
ARG
74
n
74
ARG
74
A
n
75
75
A
n
76
76
A
DNE
1
n
1
DNE
1
B
DGN
2
n
2
DGN
2
B
DIL
3
n
3
DIL
3
B
DPN
4
n
4
DPN
4
B
DVA
5
n
5
DVA
5
B
DLY
6
n
6
DLY
6
B
DTH
7
n
7
DTH
7
B
DLE
8
n
8
DLE
8
B
DTH
9
n
9
DTH
9
B
GLY
10
n
10
GLY
10
B
DLY
11
n
11
DLY
11
B
DTH
12
n
12
DTH
12
B
DIL
13
n
13
DIL
13
B
DTH
14
n
14
DTH
14
B
DLE
15
n
15
DLE
15
B
DGL
16
n
16
DGL
16
B
DVA
17
n
17
DVA
17
B
DGL
18
n
18
DGL
18
B
DPR
19
n
19
DPR
19
B
DSN
20
n
20
DSN
20
B
DAS
21
n
21
DAS
21
B
DTH
22
n
22
DTH
22
B
DIL
23
n
23
DIL
23
B
DGL
24
n
24
DGL
24
B
DSG
25
n
25
DSG
25
B
DVA
26
n
26
DVA
26
B
DLY
27
n
27
DLY
27
B
DAL
28
n
28
DAL
28
B
DLY
29
n
29
DLY
29
B
DIL
30
n
30
DIL
30
B
DGN
31
n
31
DGN
31
B
DAS
32
n
32
DAS
32
B
DLY
33
n
33
DLY
33
B
DGL
34
n
34
DGL
34
B
GLY
35
n
35
GLY
35
B
DIL
36
n
36
DIL
36
B
DPR
37
n
37
DPR
37
B
DPR
38
n
38
DPR
38
B
DAS
39
n
39
DAS
39
B
DGN
40
n
40
DGN
40
B
DGN
41
n
41
DGN
41
B
DAR
42
n
42
DAR
42
B
DLE
43
n
43
DLE
43
B
DIL
44
n
44
DIL
44
B
DPN
45
n
45
DPN
45
B
DAL
46
n
46
DAL
46
B
GLY
47
n
47
GLY
47
B
DLY
48
n
48
DLY
48
B
DGN
49
n
49
DGN
49
B
DLE
50
n
50
DLE
50
B
DGL
51
n
51
DGL
51
B
DAS
52
n
52
DAS
52
B
GLY
53
n
53
GLY
53
B
DAR
54
n
54
DAR
54
B
DTH
55
n
55
DTH
55
B
DLE
56
n
56
DLE
56
B
DSN
57
n
57
DSN
57
B
DAS
58
n
58
DAS
58
B
DTY
59
n
59
DTY
59
B
DSG
60
n
60
DSG
60
B
DIL
61
n
61
DIL
61
B
DGN
62
n
62
DGN
62
B
DLY
63
n
63
DLY
63
B
DGL
64
n
64
DGL
64
B
DSN
65
n
65
DSN
65
B
DTH
66
n
66
DTH
66
B
DLE
67
n
67
DLE
67
B
DHI
68
n
68
DHI
68
B
DLE
69
n
69
DLE
69
B
DVA
70
n
70
DVA
70
B
DLE
71
n
71
DLE
71
B
DAR
72
n
72
DAR
72
B
DLE
73
n
73
DLE
73
B
n
74
74
B
n
75
75
B
n
76
76
B
author_defined_assembly
2
dimeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_655
x+1,y,z
crystal symmetry operation
28.0270000000
0.0000000000
0.0000000000
A
O
LEU
15
A
O
LEU
15
A
N
ILE
3
A
N
ILE
3
A
N
LYS
6
A
N
LYS
6
A
O
LEU
67
A
O
LEU
67
A
O
HIS
68
A
O
HIS
68
A
N
ILE
44
A
N
ILE
44
A
N
PHE
45
A
N
PHE
45
A
O
LYS
48
A
O
LYS
48
B
O
DIL
13
B
O
DIL
13
B
N
DVA
5
B
N
DVA
5
B
N
DLY
6
B
N
DLY
6
B
O
DLE
69
B
O
DLE
69
B
O
DHI
68
B
O
DHI
68
B
N
DIL
44
B
N
DIL
44
B
N
DPN
45
B
N
DPN
45
B
O
DLY
48
B
O
DLY
48
1
A
HOH
106
C
HOH
1
A
HOH
119
C
HOH
1
A
HOH
129
C
HOH
1
A
HOH
132
C
HOH
1
B
HOH
103
D
HOH
1
B
HOH
107
D
HOH
1
B
HOH
116
D
HOH
1
B
HOH
120
D
HOH
1
A
CG
GLN
2
A
CG
GLN
2
1
Y
1
A
CD
GLN
2
A
CD
GLN
2
1
Y
1
A
OE1
GLN
2
A
OE1
GLN
2
1
Y
1
A
NE2
GLN
2
A
NE2
GLN
2
1
Y
1
A
CG
LEU
8
A
CG
LEU
8
1
Y
1
A
CD1
LEU
8
A
CD1
LEU
8
1
Y
1
A
CD2
LEU
8
A
CD2
LEU
8
1
Y
1
A
CG1
ILE
13
A
CG1
ILE
13
1
Y
1
A
CG2
ILE
13
A
CG2
ILE
13
1
Y
1
A
CD1
ILE
13
A
CD1
ILE
13
1
Y
1
A
CG
GLU
16
A
CG
GLU
16
1
Y
1
A
CD
GLU
16
A
CD
GLU
16
1
Y
1
A
OE1
GLU
16
A
OE1
GLU
16
1
Y
1
A
OE2
GLU
16
A
OE2
GLU
16
1
Y
1
A
CG
LYS
33
A
CG
LYS
33
1
Y
1
A
CD
LYS
33
A
CD
LYS
33
1
Y
1
A
CE
LYS
33
A
CE
LYS
33
1
Y
1
A
NZ
LYS
33
A
NZ
LYS
33
1
Y
1
A
CG
ARG
42
A
CG
ARG
42
1
Y
1
A
CD
ARG
42
A
CD
ARG
42
1
Y
1
A
NE
ARG
42
A
NE
ARG
42
1
Y
1
A
CZ
ARG
42
A
CZ
ARG
42
1
Y
1
A
NH1
ARG
42
A
NH1
ARG
42
1
Y
1
A
NH2
ARG
42
A
NH2
ARG
42
1
Y
1
A
CG1
ILE
44
A
CG1
ILE
44
1
Y
1
A
CG2
ILE
44
A
CG2
ILE
44
1
Y
1
A
CD1
ILE
44
A
CD1
ILE
44
1
Y
1
A
CG
LYS
63
A
CG
LYS
63
1
Y
1
A
CD
LYS
63
A
CD
LYS
63
1
Y
1
A
CE
LYS
63
A
CE
LYS
63
1
Y
1
A
NZ
LYS
63
A
NZ
LYS
63
1
Y
1
A
CG
LEU
73
A
CG
LEU
73
1
Y
1
A
CD1
LEU
73
A
CD1
LEU
73
1
Y
1
A
CD2
LEU
73
A
CD2
LEU
73
1
Y
1
B
CG
DLE
8
B
CG
DLE
8
1
Y
1
B
CD1
DLE
8
B
CD1
DLE
8
1
Y
1
B
CD2
DLE
8
B
CD2
DLE
8
1
Y
1
B
CG
DLY
11
B
CG
DLY
11
1
Y
1
B
CD
DLY
11
B
CD
DLY
11
1
Y
1
B
CE
DLY
11
B
CE
DLY
11
1
Y
1
B
NZ
DLY
11
B
NZ
DLY
11
1
Y
1
B
CG
DGL
16
B
CG
DGL
16
1
Y
1
B
CD
DGL
16
B
CD
DGL
16
1
Y
1
B
OE1
DGL
16
B
OE1
DGL
16
1
Y
1
B
OE2
DGL
16
B
OE2
DGL
16
1
Y
1
B
CG
DLY
63
B
CG
DLY
63
1
Y
1
B
CD
DLY
63
B
CD
DLY
63
1
Y
1
B
CE
DLY
63
B
CE
DLY
63
1
Y
1
B
NZ
DLY
63
B
NZ
DLY
63
1
Y
1
B
CG
DLE
73
B
CG
DLE
73
1
Y
1
B
CD1
DLE
73
B
CD1
DLE
73
1
Y
1
B
CD2
DLE
73
B
CD2
DLE
73
1
Y
1
A
ARG
72
A
ARG
72
1
Y
1
A
GLY
75
A
GLY
75
1
Y
1
A
GLY
76
A
GLY
76
1
Y
1
B
DAR
74
B
DAR
74
1
Y
1
B
GLY
75
B
GLY
75
1
Y
1
B
GLY
76
B
GLY
76
1
Y
1
B
B
H
O
DAR
HOH
54
101
1.29
1
A
A
HE22
O
GLN
HOH
31
102
1.58
1
B
B
OE2
H
DGL
GLY
24
53
1.60
1
A
A
O
O
HOH
HOH
117
124
1.71
1
A
A
O
O
LEU
HOH
56
101
1.74
1
A
A
O
O
HOH
HOH
122
128
1.82
1
B
B
O
O
DGL
HOH
51
101
1.82
1
A
A
O
O
HOH
HOH
128
131
1.94
1
A
A
O
O
HOH
HOH
116
126
1.95
1
B
B
N
O
DAR
HOH
54
101
1.99
1
A
A
O
O
HOH
HOH
122
131
1.99
1
A
A
NE2
O
GLN
HOH
31
102
2.05
1
A
A
O
O
HOH
HOH
105
113
2.05
1
A
B
HH12
O
ARG
DAL
54
46
1.47
1_555
1_665
1
B
B
O
O
HOH
HOH
112
113
1.61
1_555
2_556
1
A
A
O
O
HOH
HOH
123
130
1.83
1_555
2_656
1
A
A
O
O
HOH
HOH
120
124
1.93
1_555
2_556
1
A
LYS
11
-38.75
130.55
1
A
ASP
52
-49.48
151.27
1
B
DAL
46
-37.72
-54.59
0.3297
0.2451
0.2495
1.977
46.497
272
5292
5.14
67.82
0.38
1
NONE
1.38
MOLECULAR REPLACEMENT
30.56
0.90
1.11
1UBQ
ML
FLAT BULK SOLVENT MODEL
1.977
46.497
54
1166
0
0
1112
0.019
1164
1.847
1601
23.442
598
0.104
186
0.017
238
0.3227
0.2479
2.4911
86
1612
44.00
0.3311
0.2446
46.5098
186
3408
91.00
1.977
46.497
5GOG
5293
0.117
1
7.32
2.5
68
0.382
1.98
2.05
1
1.5
refinement
PHENIX
(1.10.1_2155: ???)
N
Lys29-linked di-ubiquitin
1
N
N
2
N
N
3
N
N
3
N
N
A
THR
22
A
THR
22
HELX_P
A
GLY
35
A
GLY
35
1
AA1
14
A
PRO
37
A
PRO
37
HELX_P
A
GLN
41
A
GLN
41
5
AA2
5
A
THR
55
A
THR
55
HELX_P
A
ASN
60
A
ASN
60
5
AA3
6
B
DTH
22
B
DTH
22
HELX_P
B
GLY
35
B
GLY
35
1
AA4
14
B
DPR
37
B
DPR
37
HELX_P
B
DAS
39
B
DAS
39
5
AA5
3
B
DTH
55
B
DTH
55
HELX_P
B
DTY
59
B
DTY
59
5
AA6
5
covale
1.328
both
B
DNE
1
B
C
DNE
1
1_555
B
DGN
2
B
N
DGN
2
1_555
covale
1.366
both
B
DGN
2
B
C
DGN
2
1_555
B
DIL
3
B
N
DIL
3
1_555
covale
1.315
both
B
DIL
3
B
C
DIL
3
1_555
B
DPN
4
B
N
DPN
4
1_555
covale
1.316
both
B
DPN
4
B
C
DPN
4
1_555
B
DVA
5
B
N
DVA
5
1_555
covale
1.318
both
B
DVA
5
B
C
DVA
5
1_555
B
DLY
6
B
N
DLY
6
1_555
covale
1.329
both
B
DLY
6
B
C
DLY
6
1_555
B
DTH
7
B
N
DTH
7
1_555
covale
1.332
both
B
DTH
7
B
C
DTH
7
1_555
B
DLE
8
B
N
DLE
8
1_555
covale
1.334
both
B
DLE
8
B
C
DLE
8
1_555
B
DTH
9
B
N
DTH
9
1_555
covale
1.330
both
B
DTH
9
B
C
DTH
9
1_555
B
GLY
10
B
N
GLY
10
1_555
covale
1.322
both
B
GLY
10
B
C
GLY
10
1_555
B
DLY
11
B
N
DLY
11
1_555
covale
1.322
both
B
DLY
11
B
C
DLY
11
1_555
B
DTH
12
B
N
DTH
12
1_555
covale
1.321
both
B
DTH
12
B
C
DTH
12
1_555
B
DIL
13
B
N
DIL
13
1_555
covale
1.321
both
B
DIL
13
B
C
DIL
13
1_555
B
DTH
14
B
N
DTH
14
1_555
covale
1.342
both
B
DTH
14
B
C
DTH
14
1_555
B
DLE
15
B
N
DLE
15
1_555
covale
1.332
both
B
DLE
15
B
C
DLE
15
1_555
B
DGL
16
B
N
DGL
16
1_555
covale
1.319
both
B
DGL
16
B
C
DGL
16
1_555
B
DVA
17
B
N
DVA
17
1_555
covale
1.333
both
B
DVA
17
B
C
DVA
17
1_555
B
DGL
18
B
N
DGL
18
1_555
covale
1.345
both
B
DGL
18
B
C
DGL
18
1_555
B
DPR
19
B
N
DPR
19
1_555
covale
1.331
both
B
DPR
19
B
C
DPR
19
1_555
B
DSN
20
B
N
DSN
20
1_555
covale
1.353
both
B
DSN
20
B
C
DSN
20
1_555
B
DAS
21
B
N
DAS
21
1_555
covale
1.327
both
B
DAS
21
B
C
DAS
21
1_555
B
DTH
22
B
N
DTH
22
1_555
covale
1.326
both
B
DTH
22
B
C
DTH
22
1_555
B
DIL
23
B
N
DIL
23
1_555
covale
1.332
both
B
DIL
23
B
C
DIL
23
1_555
B
DGL
24
B
N
DGL
24
1_555
covale
1.336
both
B
DGL
24
B
C
DGL
24
1_555
B
DSG
25
B
N
DSG
25
1_555
covale
1.325
both
B
DSG
25
B
C
DSG
25
1_555
B
DVA
26
B
N
DVA
26
1_555
covale
1.323
both
B
DVA
26
B
C
DVA
26
1_555
B
DLY
27
B
N
DLY
27
1_555
covale
1.336
both
B
DLY
27
B
C
DLY
27
1_555
B
DAL
28
B
N
DAL
28
1_555
covale
1.333
both
B
DAL
28
B
C
DAL
28
1_555
B
DLY
29
B
N
DLY
29
1_555
covale
1.336
both
B
DLY
29
B
C
DLY
29
1_555
B
DIL
30
B
N
DIL
30
1_555
covale
1.332
both
B
DIL
30
B
C
DIL
30
1_555
B
DGN
31
B
N
DGN
31
1_555
covale
1.362
both
B
DGN
31
B
C
DGN
31
1_555
B
DAS
32
B
N
DAS
32
1_555
covale
1.322
both
B
DAS
32
B
C
DAS
32
1_555
B
DLY
33
B
N
DLY
33
1_555
covale
1.325
both
B
DLY
33
B
C
DLY
33
1_555
B
DGL
34
B
N
DGL
34
1_555
covale
1.334
both
B
DGL
34
B
C
DGL
34
1_555
B
GLY
35
B
N
GLY
35
1_555
covale
1.325
both
B
GLY
35
B
C
GLY
35
1_555
B
DIL
36
B
N
DIL
36
1_555
covale
1.343
both
B
DIL
36
B
C
DIL
36
1_555
B
DPR
37
B
N
DPR
37
1_555
covale
1.333
both
B
DPR
37
B
C
DPR
37
1_555
B
DPR
38
B
N
DPR
38
1_555
covale
1.329
both
B
DPR
38
B
C
DPR
38
1_555
B
DAS
39
B
N
DAS
39
1_555
covale
1.327
both
B
DAS
39
B
C
DAS
39
1_555
B
DGN
40
B
N
DGN
40
1_555
covale
1.364
both
B
DGN
40
B
C
DGN
40
1_555
B
DGN
41
B
N
DGN
41
1_555
covale
1.351
both
B
DGN
41
B
C
DGN
41
1_555
B
DAR
42
B
N
DAR
42
1_555
covale
1.321
both
B
DAR
42
B
C
DAR
42
1_555
B
DLE
43
B
N
DLE
43
1_555
covale
1.333
both
B
DLE
43
B
C
DLE
43
1_555
B
DIL
44
B
N
DIL
44
1_555
covale
1.330
both
B
DIL
44
B
C
DIL
44
1_555
B
DPN
45
B
N
DPN
45
1_555
covale
1.334
both
B
DPN
45
B
C
DPN
45
1_555
B
DAL
46
B
N
DAL
46
1_555
covale
1.328
both
B
DAL
46
B
C
DAL
46
1_555
B
GLY
47
B
N
GLY
47
1_555
covale
1.329
both
B
GLY
47
B
C
GLY
47
1_555
B
DLY
48
B
N
DLY
48
1_555
covale
1.324
both
B
DLY
48
B
C
DLY
48
1_555
B
DGN
49
B
N
DGN
49
1_555
covale
1.338
both
B
DGN
49
B
C
DGN
49
1_555
B
DLE
50
B
N
DLE
50
1_555
covale
1.329
both
B
DLE
50
B
C
DLE
50
1_555
B
DGL
51
B
N
DGL
51
1_555
covale
1.323
both
B
DGL
51
B
C
DGL
51
1_555
B
DAS
52
B
N
DAS
52
1_555
covale
1.317
both
B
DAS
52
B
C
DAS
52
1_555
B
GLY
53
B
N
GLY
53
1_555
covale
1.332
both
B
GLY
53
B
C
GLY
53
1_555
B
DAR
54
B
N
DAR
54
1_555
covale
1.334
both
B
DAR
54
B
C
DAR
54
1_555
B
DTH
55
B
N
DTH
55
1_555
covale
1.334
both
B
DTH
55
B
C
DTH
55
1_555
B
DLE
56
B
N
DLE
56
1_555
covale
1.340
both
B
DLE
56
B
C
DLE
56
1_555
B
DSN
57
B
N
DSN
57
1_555
covale
1.358
both
B
DSN
57
B
C
DSN
57
1_555
B
DAS
58
B
N
DAS
58
1_555
covale
1.340
both
B
DAS
58
B
C
DAS
58
1_555
B
DTY
59
B
N
DTY
59
1_555
covale
1.325
both
B
DTY
59
B
C
DTY
59
1_555
B
DSG
60
B
N
DSG
60
1_555
covale
1.329
both
B
DSG
60
B
C
DSG
60
1_555
B
DIL
61
B
N
DIL
61
1_555
covale
1.331
both
B
DIL
61
B
C
DIL
61
1_555
B
DGN
62
B
N
DGN
62
1_555
covale
1.353
both
B
DGN
62
B
C
DGN
62
1_555
B
DLY
63
B
N
DLY
63
1_555
covale
1.325
both
B
DLY
63
B
C
DLY
63
1_555
B
DGL
64
B
N
DGL
64
1_555
covale
1.325
both
B
DGL
64
B
C
DGL
64
1_555
B
DSN
65
B
N
DSN
65
1_555
covale
1.341
both
B
DSN
65
B
C
DSN
65
1_555
B
DTH
66
B
N
DTH
66
1_555
covale
1.336
both
B
DTH
66
B
C
DTH
66
1_555
B
DLE
67
B
N
DLE
67
1_555
covale
1.322
both
B
DLE
67
B
C
DLE
67
1_555
B
DHI
68
B
N
DHI
68
1_555
covale
1.321
both
B
DHI
68
B
C
DHI
68
1_555
B
DLE
69
B
N
DLE
69
1_555
covale
1.332
both
B
DLE
69
B
C
DLE
69
1_555
B
DVA
70
B
N
DVA
70
1_555
covale
1.334
both
B
DVA
70
B
C
DVA
70
1_555
B
DLE
71
B
N
DLE
71
1_555
covale
1.323
both
B
DLE
71
B
C
DLE
71
1_555
B
DAR
72
B
N
DAR
72
1_555
covale
1.324
both
B
DAR
72
B
C
DAR
72
1_555
B
DLE
73
B
N
DLE
73
1_555
PROTEIN BINDING
polyubiquitin chains, quasi-racemic crystal, PROTEIN BINDING
UBB_HUMAN
UNP
1
1
P0CG47
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
5GOG
PDB
2
1
5GOG
1
76
5GOG
1
76
P0CG47
A
1
1
76
1
76
5GOG
1
76
5GOG
B
2
1
76
5
5
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
THR
12
A
THR
12
A
GLU
16
A
GLU
16
A
GLN
2
A
GLN
2
A
THR
7
A
THR
7
A
THR
66
A
THR
66
A
VAL
70
A
VAL
70
A
ARG
42
A
ARG
42
A
PHE
45
A
PHE
45
A
LYS
48
A
LYS
48
A
GLN
49
A
GLN
49
B
DTH
12
B
DTH
12
B
DGL
16
B
DGL
16
B
DGN
2
B
DGN
2
B
DLY
6
B
DLY
6
B
DTH
66
B
DTH
66
B
DLE
71
B
DLE
71
B
DGN
41
B
DGN
41
B
DPN
45
B
DPN
45
B
DLY
48
B
DLY
48
B
DGN
49
B
DGN
49
3
P 1 2 1