0.018045 0.000000 0.007015 0.000000 0.012621 0.000000 0.000000 0.000000 0.015125 0.00000 0.00000 0.00000 Zhu, Y. Ye, S. Zhang, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 111.24 90.00 55.417 79.236 70.936 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C N 241 N O N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 R C N 255 N O N 256 N C N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C Y 272 N C Y 273 N C Y 274 N C Y 275 N N Y 276 N C Y 277 N C Y 278 N C Y 279 N C Y 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C Y 299 N C Y 300 N C Y 301 N C Y 302 N C Y 303 N C Y 304 N C N 305 N O N 306 N O N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C N 323 N C N 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing Y 264 N doub Y 265 N sing Y 266 N sing N 267 N sing Y 268 N doub Y 269 N sing Y 270 N sing N 271 N sing Y 272 N sing Y 273 N doub N 274 N sing Y 275 N doub N 276 N sing Y 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing Y 292 N doub Y 293 N sing Y 294 N sing N 295 N sing Y 296 N doub N 297 N sing Y 298 N doub N 299 N sing Y 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing US J. Virol. JOVIAM 0825 1098-5514 91 10.1128/JVI.01445-16 27795416 Creating an Artificial Tail Anchor as a Novel Strategy To Enhance the Potency of Peptide-Based HIV Fusion Inhibitors 2017 10.2210/pdb5h0n/pdb pdb_00005h0n 100 1 PIXEL 2016-04-27 DECTRIS PILATUS3 2M SINGLE WAVELENGTH M x-ray 1 0.97853 1.0 BL19U1 SSRF 0.97853 SYNCHROTRON SSRF BEAMLINE BL19U1 5252.146 HIV-1 gp41 NHR 6 syn polymer 3931.463 HIV-1 fusion inhibitor MT-WQ-IDL 6 syn polymer 18.015 water 7 nat water no no TLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL TLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL A,C,E,G,I,K polypeptide(L) no no MTWEEWDKKIEEYTKKIEELIKKSQNQQIDL MTWEEWDKKIEEYTKKIEELIKKSQNQQIDL B,D,F,H,J,L polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1 2.63 53.31 VAPOR DIFFUSION 0.2 M Zinc Acetate, 0.1 M Imidazole: HCl pH 8.0, 20% (v/v) 1,4-Butanediol 289 citation diffrn_detector pdbx_struct_oper_list citation chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Data collection Database references Derived calculations Database references Data collection Database references Refinement description 1 0 2016-11-02 1 1 2017-09-27 1 2 2017-11-22 1 3 2023-11-08 _citation.journal_id_CSD _diffrn_detector.detector _pdbx_struct_oper_list.symmetry_operation _citation.journal_abbrev _citation.journal_volume _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _database_2.pdbx_DOI _database_2.pdbx_database_accession N PDBJ Y PDBJ 2016-10-06 REL REL HOH water 11676 Human immunodeficiency virus 1 sample 1 46 11676 Human immunodeficiency virus 1 sample 1 31 5CMZ PDB experimental model HOH 3 3 HOH HOH 101 C HOH 4 3 HOH HOH 101 D HOH 1 3 HOH HOH 102 D HOH 7 3 HOH HOH 101 E HOH 5 3 HOH HOH 102 E HOH 2 3 HOH HOH 101 H HOH 6 3 HOH HOH 101 L n 1 2 A n 2 3 A n 3 4 A n 4 5 A n 5 6 A ALA 7 n 6 ALA 7 A ARG 8 n 7 ARG 8 A GLN 9 n 8 GLN 9 A LEU 10 n 9 LEU 10 A LEU 11 n 10 LEU 11 A SER 12 n 11 SER 12 A GLY 13 n 12 GLY 13 A ILE 14 n 13 ILE 14 A VAL 15 n 14 VAL 15 A GLN 16 n 15 GLN 16 A GLN 17 n 16 GLN 17 A GLN 18 n 17 GLN 18 A ASN 19 n 18 ASN 19 A ASN 20 n 19 ASN 20 A LEU 21 n 20 LEU 21 A LEU 22 n 21 LEU 22 A ARG 23 n 22 ARG 23 A ALA 24 n 23 ALA 24 A ILE 25 n 24 ILE 25 A GLU 26 n 25 GLU 26 A ALA 27 n 26 ALA 27 A GLN 28 n 27 GLN 28 A GLN 29 n 28 GLN 29 A HIS 30 n 29 HIS 30 A LEU 31 n 30 LEU 31 A LEU 32 n 31 LEU 32 A GLN 33 n 32 GLN 33 A LEU 34 n 33 LEU 34 A THR 35 n 34 THR 35 A VAL 36 n 35 VAL 36 A TRP 37 n 36 TRP 37 A GLY 38 n 37 GLY 38 A ILE 39 n 38 ILE 39 A LYS 40 n 39 LYS 40 A GLN 41 n 40 GLN 41 A LEU 42 n 41 LEU 42 A GLN 43 n 42 GLN 43 A ALA 44 n 43 ALA 44 A ARG 45 n 44 ARG 45 A ILE 46 n 45 ILE 46 A n 46 47 A MET 52 n 1 MET 52 B THR 53 n 2 THR 53 B TRP 54 n 3 TRP 54 B GLU 55 n 4 GLU 55 B GLU 56 n 5 GLU 56 B TRP 57 n 6 TRP 57 B ASP 58 n 7 ASP 58 B LYS 59 n 8 LYS 59 B LYS 60 n 9 LYS 60 B ILE 61 n 10 ILE 61 B GLU 62 n 11 GLU 62 B GLU 63 n 12 GLU 63 B TYR 64 n 13 TYR 64 B THR 65 n 14 THR 65 B LYS 66 n 15 LYS 66 B LYS 67 n 16 LYS 67 B ILE 68 n 17 ILE 68 B GLU 69 n 18 GLU 69 B GLU 70 n 19 GLU 70 B LEU 71 n 20 LEU 71 B ILE 72 n 21 ILE 72 B LYS 73 n 22 LYS 73 B LYS 74 n 23 LYS 74 B SER 75 n 24 SER 75 B GLN 76 n 25 GLN 76 B ASN 77 n 26 ASN 77 B GLN 78 n 27 GLN 78 B GLN 79 n 28 GLN 79 B ILE 80 n 29 ILE 80 B ASP 81 n 30 ASP 81 B LEU 82 n 31 LEU 82 B n 1 2 C n 2 3 C n 3 4 C VAL 5 n 4 VAL 5 C GLN 6 n 5 GLN 6 C ALA 7 n 6 ALA 7 C ARG 8 n 7 ARG 8 C GLN 9 n 8 GLN 9 C LEU 10 n 9 LEU 10 C LEU 11 n 10 LEU 11 C SER 12 n 11 SER 12 C GLY 13 n 12 GLY 13 C ILE 14 n 13 ILE 14 C VAL 15 n 14 VAL 15 C GLN 16 n 15 GLN 16 C GLN 17 n 16 GLN 17 C GLN 18 n 17 GLN 18 C ASN 19 n 18 ASN 19 C ASN 20 n 19 ASN 20 C LEU 21 n 20 LEU 21 C LEU 22 n 21 LEU 22 C ARG 23 n 22 ARG 23 C ALA 24 n 23 ALA 24 C ILE 25 n 24 ILE 25 C GLU 26 n 25 GLU 26 C ALA 27 n 26 ALA 27 C GLN 28 n 27 GLN 28 C GLN 29 n 28 GLN 29 C HIS 30 n 29 HIS 30 C LEU 31 n 30 LEU 31 C LEU 32 n 31 LEU 32 C GLN 33 n 32 GLN 33 C LEU 34 n 33 LEU 34 C THR 35 n 34 THR 35 C VAL 36 n 35 VAL 36 C TRP 37 n 36 TRP 37 C GLY 38 n 37 GLY 38 C ILE 39 n 38 ILE 39 C LYS 40 n 39 LYS 40 C GLN 41 n 40 GLN 41 C LEU 42 n 41 LEU 42 C GLN 43 n 42 GLN 43 C ALA 44 n 43 ALA 44 C ARG 45 n 44 ARG 45 C ILE 46 n 45 ILE 46 C n 46 47 C MET 52 n 1 MET 52 D THR 53 n 2 THR 53 D TRP 54 n 3 TRP 54 D GLU 55 n 4 GLU 55 D GLU 56 n 5 GLU 56 D TRP 57 n 6 TRP 57 D ASP 58 n 7 ASP 58 D LYS 59 n 8 LYS 59 D LYS 60 n 9 LYS 60 D ILE 61 n 10 ILE 61 D GLU 62 n 11 GLU 62 D GLU 63 n 12 GLU 63 D TYR 64 n 13 TYR 64 D THR 65 n 14 THR 65 D LYS 66 n 15 LYS 66 D LYS 67 n 16 LYS 67 D ILE 68 n 17 ILE 68 D GLU 69 n 18 GLU 69 D GLU 70 n 19 GLU 70 D LEU 71 n 20 LEU 71 D ILE 72 n 21 ILE 72 D LYS 73 n 22 LYS 73 D LYS 74 n 23 LYS 74 D SER 75 n 24 SER 75 D GLN 76 n 25 GLN 76 D ASN 77 n 26 ASN 77 D GLN 78 n 27 GLN 78 D GLN 79 n 28 GLN 79 D ILE 80 n 29 ILE 80 D ASP 81 n 30 ASP 81 D n 31 82 D n 1 2 E n 2 3 E THR 4 n 3 THR 4 E VAL 5 n 4 VAL 5 E GLN 6 n 5 GLN 6 E ALA 7 n 6 ALA 7 E ARG 8 n 7 ARG 8 E GLN 9 n 8 GLN 9 E LEU 10 n 9 LEU 10 E LEU 11 n 10 LEU 11 E SER 12 n 11 SER 12 E GLY 13 n 12 GLY 13 E ILE 14 n 13 ILE 14 E VAL 15 n 14 VAL 15 E GLN 16 n 15 GLN 16 E GLN 17 n 16 GLN 17 E GLN 18 n 17 GLN 18 E ASN 19 n 18 ASN 19 E ASN 20 n 19 ASN 20 E LEU 21 n 20 LEU 21 E LEU 22 n 21 LEU 22 E ARG 23 n 22 ARG 23 E ALA 24 n 23 ALA 24 E ILE 25 n 24 ILE 25 E GLU 26 n 25 GLU 26 E ALA 27 n 26 ALA 27 E GLN 28 n 27 GLN 28 E GLN 29 n 28 GLN 29 E HIS 30 n 29 HIS 30 E LEU 31 n 30 LEU 31 E LEU 32 n 31 LEU 32 E GLN 33 n 32 GLN 33 E LEU 34 n 33 LEU 34 E THR 35 n 34 THR 35 E VAL 36 n 35 VAL 36 E TRP 37 n 36 TRP 37 E GLY 38 n 37 GLY 38 E ILE 39 n 38 ILE 39 E LYS 40 n 39 LYS 40 E GLN 41 n 40 GLN 41 E LEU 42 n 41 LEU 42 E GLN 43 n 42 GLN 43 E ALA 44 n 43 ALA 44 E ARG 45 n 44 ARG 45 E ILE 46 n 45 ILE 46 E n 46 47 E MET 52 n 1 MET 52 F THR 53 n 2 THR 53 F TRP 54 n 3 TRP 54 F GLU 55 n 4 GLU 55 F GLU 56 n 5 GLU 56 F TRP 57 n 6 TRP 57 F ASP 58 n 7 ASP 58 F LYS 59 n 8 LYS 59 F LYS 60 n 9 LYS 60 F ILE 61 n 10 ILE 61 F GLU 62 n 11 GLU 62 F GLU 63 n 12 GLU 63 F TYR 64 n 13 TYR 64 F THR 65 n 14 THR 65 F LYS 66 n 15 LYS 66 F LYS 67 n 16 LYS 67 F ILE 68 n 17 ILE 68 F GLU 69 n 18 GLU 69 F GLU 70 n 19 GLU 70 F LEU 71 n 20 LEU 71 F ILE 72 n 21 ILE 72 F LYS 73 n 22 LYS 73 F LYS 74 n 23 LYS 74 F SER 75 n 24 SER 75 F GLN 76 n 25 GLN 76 F ASN 77 n 26 ASN 77 F GLN 78 n 27 GLN 78 F GLN 79 n 28 GLN 79 F ILE 80 n 29 ILE 80 F ASP 81 n 30 ASP 81 F n 31 82 F n 1 2 G LEU 3 n 2 LEU 3 G THR 4 n 3 THR 4 G VAL 5 n 4 VAL 5 G GLN 6 n 5 GLN 6 G ALA 7 n 6 ALA 7 G ARG 8 n 7 ARG 8 G GLN 9 n 8 GLN 9 G LEU 10 n 9 LEU 10 G LEU 11 n 10 LEU 11 G SER 12 n 11 SER 12 G GLY 13 n 12 GLY 13 G ILE 14 n 13 ILE 14 G VAL 15 n 14 VAL 15 G GLN 16 n 15 GLN 16 G GLN 17 n 16 GLN 17 G GLN 18 n 17 GLN 18 G ASN 19 n 18 ASN 19 G ASN 20 n 19 ASN 20 G LEU 21 n 20 LEU 21 G LEU 22 n 21 LEU 22 G ARG 23 n 22 ARG 23 G ALA 24 n 23 ALA 24 G ILE 25 n 24 ILE 25 G GLU 26 n 25 GLU 26 G ALA 27 n 26 ALA 27 G GLN 28 n 27 GLN 28 G GLN 29 n 28 GLN 29 G HIS 30 n 29 HIS 30 G LEU 31 n 30 LEU 31 G LEU 32 n 31 LEU 32 G GLN 33 n 32 GLN 33 G LEU 34 n 33 LEU 34 G THR 35 n 34 THR 35 G VAL 36 n 35 VAL 36 G TRP 37 n 36 TRP 37 G GLY 38 n 37 GLY 38 G ILE 39 n 38 ILE 39 G LYS 40 n 39 LYS 40 G GLN 41 n 40 GLN 41 G LEU 42 n 41 LEU 42 G GLN 43 n 42 GLN 43 G ALA 44 n 43 ALA 44 G ARG 45 n 44 ARG 45 G ILE 46 n 45 ILE 46 G n 46 47 G MET 52 n 1 MET 52 H THR 53 n 2 THR 53 H TRP 54 n 3 TRP 54 H GLU 55 n 4 GLU 55 H GLU 56 n 5 GLU 56 H TRP 57 n 6 TRP 57 H ASP 58 n 7 ASP 58 H LYS 59 n 8 LYS 59 H LYS 60 n 9 LYS 60 H ILE 61 n 10 ILE 61 H GLU 62 n 11 GLU 62 H GLU 63 n 12 GLU 63 H TYR 64 n 13 TYR 64 H THR 65 n 14 THR 65 H LYS 66 n 15 LYS 66 H LYS 67 n 16 LYS 67 H ILE 68 n 17 ILE 68 H GLU 69 n 18 GLU 69 H GLU 70 n 19 GLU 70 H LEU 71 n 20 LEU 71 H ILE 72 n 21 ILE 72 H LYS 73 n 22 LYS 73 H LYS 74 n 23 LYS 74 H SER 75 n 24 SER 75 H GLN 76 n 25 GLN 76 H ASN 77 n 26 ASN 77 H GLN 78 n 27 GLN 78 H GLN 79 n 28 GLN 79 H ILE 80 n 29 ILE 80 H ASP 81 n 30 ASP 81 H n 31 82 H n 1 2 I LEU 3 n 2 LEU 3 I THR 4 n 3 THR 4 I VAL 5 n 4 VAL 5 I GLN 6 n 5 GLN 6 I ALA 7 n 6 ALA 7 I ARG 8 n 7 ARG 8 I GLN 9 n 8 GLN 9 I LEU 10 n 9 LEU 10 I LEU 11 n 10 LEU 11 I SER 12 n 11 SER 12 I GLY 13 n 12 GLY 13 I ILE 14 n 13 ILE 14 I VAL 15 n 14 VAL 15 I GLN 16 n 15 GLN 16 I GLN 17 n 16 GLN 17 I GLN 18 n 17 GLN 18 I ASN 19 n 18 ASN 19 I ASN 20 n 19 ASN 20 I LEU 21 n 20 LEU 21 I LEU 22 n 21 LEU 22 I ARG 23 n 22 ARG 23 I ALA 24 n 23 ALA 24 I ILE 25 n 24 ILE 25 I GLU 26 n 25 GLU 26 I ALA 27 n 26 ALA 27 I GLN 28 n 27 GLN 28 I GLN 29 n 28 GLN 29 I HIS 30 n 29 HIS 30 I LEU 31 n 30 LEU 31 I LEU 32 n 31 LEU 32 I GLN 33 n 32 GLN 33 I LEU 34 n 33 LEU 34 I THR 35 n 34 THR 35 I VAL 36 n 35 VAL 36 I TRP 37 n 36 TRP 37 I GLY 38 n 37 GLY 38 I ILE 39 n 38 ILE 39 I LYS 40 n 39 LYS 40 I GLN 41 n 40 GLN 41 I LEU 42 n 41 LEU 42 I GLN 43 n 42 GLN 43 I ALA 44 n 43 ALA 44 I ARG 45 n 44 ARG 45 I ILE 46 n 45 ILE 46 I n 46 47 I MET 52 n 1 MET 52 J THR 53 n 2 THR 53 J TRP 54 n 3 TRP 54 J GLU 55 n 4 GLU 55 J GLU 56 n 5 GLU 56 J TRP 57 n 6 TRP 57 J ASP 58 n 7 ASP 58 J LYS 59 n 8 LYS 59 J LYS 60 n 9 LYS 60 J ILE 61 n 10 ILE 61 J GLU 62 n 11 GLU 62 J GLU 63 n 12 GLU 63 J TYR 64 n 13 TYR 64 J THR 65 n 14 THR 65 J LYS 66 n 15 LYS 66 J LYS 67 n 16 LYS 67 J ILE 68 n 17 ILE 68 J GLU 69 n 18 GLU 69 J GLU 70 n 19 GLU 70 J LEU 71 n 20 LEU 71 J ILE 72 n 21 ILE 72 J LYS 73 n 22 LYS 73 J LYS 74 n 23 LYS 74 J SER 75 n 24 SER 75 J GLN 76 n 25 GLN 76 J ASN 77 n 26 ASN 77 J GLN 78 n 27 GLN 78 J GLN 79 n 28 GLN 79 J ILE 80 n 29 ILE 80 J ASP 81 n 30 ASP 81 J LEU 82 n 31 LEU 82 J n 1 2 K n 2 3 K THR 4 n 3 THR 4 K VAL 5 n 4 VAL 5 K GLN 6 n 5 GLN 6 K ALA 7 n 6 ALA 7 K ARG 8 n 7 ARG 8 K GLN 9 n 8 GLN 9 K LEU 10 n 9 LEU 10 K LEU 11 n 10 LEU 11 K SER 12 n 11 SER 12 K GLY 13 n 12 GLY 13 K ILE 14 n 13 ILE 14 K VAL 15 n 14 VAL 15 K GLN 16 n 15 GLN 16 K GLN 17 n 16 GLN 17 K GLN 18 n 17 GLN 18 K ASN 19 n 18 ASN 19 K ASN 20 n 19 ASN 20 K LEU 21 n 20 LEU 21 K LEU 22 n 21 LEU 22 K ARG 23 n 22 ARG 23 K ALA 24 n 23 ALA 24 K ILE 25 n 24 ILE 25 K GLU 26 n 25 GLU 26 K ALA 27 n 26 ALA 27 K GLN 28 n 27 GLN 28 K GLN 29 n 28 GLN 29 K HIS 30 n 29 HIS 30 K LEU 31 n 30 LEU 31 K LEU 32 n 31 LEU 32 K GLN 33 n 32 GLN 33 K LEU 34 n 33 LEU 34 K THR 35 n 34 THR 35 K VAL 36 n 35 VAL 36 K TRP 37 n 36 TRP 37 K GLY 38 n 37 GLY 38 K ILE 39 n 38 ILE 39 K LYS 40 n 39 LYS 40 K GLN 41 n 40 GLN 41 K LEU 42 n 41 LEU 42 K GLN 43 n 42 GLN 43 K ALA 44 n 43 ALA 44 K ARG 45 n 44 ARG 45 K ILE 46 n 45 ILE 46 K n 46 47 K MET 52 n 1 MET 52 L THR 53 n 2 THR 53 L TRP 54 n 3 TRP 54 L GLU 55 n 4 GLU 55 L GLU 56 n 5 GLU 56 L TRP 57 n 6 TRP 57 L ASP 58 n 7 ASP 58 L LYS 59 n 8 LYS 59 L LYS 60 n 9 LYS 60 L ILE 61 n 10 ILE 61 L GLU 62 n 11 GLU 62 L GLU 63 n 12 GLU 63 L TYR 64 n 13 TYR 64 L THR 65 n 14 THR 65 L LYS 66 n 15 LYS 66 L LYS 67 n 16 LYS 67 L ILE 68 n 17 ILE 68 L GLU 69 n 18 GLU 69 L GLU 70 n 19 GLU 70 L LEU 71 n 20 LEU 71 L ILE 72 n 21 ILE 72 L LYS 73 n 22 LYS 73 L LYS 74 n 23 LYS 74 L SER 75 n 24 SER 75 L GLN 76 n 25 GLN 76 L ASN 77 n 26 ASN 77 L GLN 78 n 27 GLN 78 L GLN 79 n 28 GLN 79 L ILE 80 n 29 ILE 80 L ASP 81 n 30 ASP 81 L n 31 82 L author_and_software_defined_assembly PISA 6 hexameric author_and_software_defined_assembly PISA 6 hexameric 11560 -100 11480 11480 -95 11950 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A THR 2 A THR 1 1 Y 1 A LEU 3 A LEU 2 1 Y 1 A THR 4 A THR 3 1 Y 1 A VAL 5 A VAL 4 1 Y 1 A GLN 6 A GLN 5 1 Y 1 A LEU 47 A LEU 46 1 Y 1 C THR 2 C THR 1 1 Y 1 C LEU 3 C LEU 2 1 Y 1 C THR 4 C THR 3 1 Y 1 C LEU 47 C LEU 46 1 Y 1 D LEU 82 D LEU 31 1 Y 1 E THR 2 E THR 1 1 Y 1 E LEU 3 E LEU 2 1 Y 1 E LEU 47 E LEU 46 1 Y 1 F LEU 82 F LEU 31 1 Y 1 G THR 2 G THR 1 1 Y 1 G LEU 47 G LEU 46 1 Y 1 H LEU 82 H LEU 31 1 Y 1 I THR 2 I THR 1 1 Y 1 I LEU 47 I LEU 46 1 Y 1 K THR 2 K THR 1 1 Y 1 K LEU 3 K LEU 2 1 Y 1 K LEU 47 K LEU 46 1 Y 1 L LEU 82 L LEU 31 1 Y 1 D D N O MET HOH 52 101 2.04 1 J D CD2 O LEU HOH 82 101 2.17 1_555 2_455 1 B ASP 81 -79.68 42.63 1 C ARG 8 -53.67 -72.42 1 D ILE 80 -69.64 70.27 1 F ILE 80 -58.59 -7.52 1 G VAL 5 -151.28 79.66 1 K GLN 6 -94.13 56.01 1 L ILE 80 -72.61 22.08 0.2759 0.2371 0.2392 2.800 39.6 634 12009 5.28 84.58 0.41 1 FREE R-VALUE 1.38 MOLECULAR REPLACEMENT 30.34 0.90 1.11 5CMZ 2.800 39.6 7 3687 0 0 3680 0.004 3716 0.465 4988 21.457 1448 0.035 571 0.002 623 0.3283 0.2673 3.0162 129 2315 87.00 0.3099 0.2588 3.3196 113 2284 85.00 0.2852 0.2422 3.7996 137 2310 87.00 0.2209 0.2028 4.7858 127 2246 84.00 0.3018 0.2514 39.6219 128 2220 81.00 2.8 39.6 5H0N 12009 0.079 1 9.3 2.5 84.6 2.80 2.85 1 refinement PHENIX (1.10.1_2155: ???) data reduction HKL-3000 data scaling HKL-3000 phasing PHENIX N Crystal structure of HIV-1 fusion inhibitor MT-WQ-IDL bound to gp41 NHR 1 N N 2 N N 1 N N 2 N N 1 N N 2 N N 1 N N 2 N N 1 N N 2 N N 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N A GLN 9 A GLN 8 HELX_P A ALA 44 A ALA 43 1 AA1 36 B THR 53 B THR 2 HELX_P B GLN 78 B GLN 27 1 AA2 26 C ALA 7 C ALA 6 HELX_P C ARG 45 C ARG 44 1 AA3 39 D THR 53 D THR 2 HELX_P D ILE 80 D ILE 29 1 AA4 28 E VAL 5 E VAL 4 HELX_P E ALA 44 E ALA 43 1 AA5 40 F THR 53 F THR 2 HELX_P F ILE 80 F ILE 29 1 AA6 28 G GLN 6 G GLN 5 HELX_P G GLN 43 G GLN 42 1 AA7 38 H THR 53 H THR 2 HELX_P H ILE 80 H ILE 29 1 AA8 28 I THR 4 I THR 3 HELX_P I ILE 46 I ILE 45 1 AA9 43 J THR 53 J THR 2 HELX_P J GLN 78 J GLN 27 1 AB1 26 K ALA 7 K ALA 6 HELX_P K ALA 44 K ALA 43 1 AB2 38 L THR 53 L THR 2 HELX_P L ILE 80 L ILE 29 1 AB3 28 VIRAL PROTEIN/VIRAL PROTEIN INHIBITOR MT-WQ-IDL, HIV-1, fusion inhibitor, VIRAL PROTEIN-VIRAL PROTEIN INHIBITOR complex 5H0N PDB 1 1 5H0N 5H0N PDB 2 1 5H0N 2 47 5H0N 2 47 5H0N A 1 1 46 52 82 5H0N 52 82 5H0N B 2 1 31 2 47 5H0N 2 47 5H0N C 1 1 46 52 82 5H0N 52 82 5H0N D 2 1 31 2 47 5H0N 2 47 5H0N E 1 1 46 52 82 5H0N 52 82 5H0N F 2 1 31 2 47 5H0N 2 47 5H0N G 1 1 46 52 82 5H0N 52 82 5H0N H 2 1 31 2 47 5H0N 2 47 5H0N I 1 1 46 52 82 5H0N 52 82 5H0N J 2 1 31 2 47 5H0N 2 47 5H0N K 1 1 46 52 82 5H0N 52 82 5H0N L 2 1 31 4 P 1 21 1