0.016000 0.009238 0.000000 0.000000 0.018475 0.000000 0.000000 0.000000 0.008929 0.00000 0.00000 0.00000 Royant, A. Nango, E. Nakane, T. Tanaka, T. Arima, T. Neutze, R. Iwata, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 62.500 62.500 112.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C14 H30 198.388 TETRADECANE non-polymer C10 H22 142.282 DECANE non-polymer C9 H20 128.255 nonane non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C7 H16 100.202 HEPTANE non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C43 H88 O3 653.157 2,3-DI-PHYTANYL-GLYCEROL 1,2-DI-1-(3,7,11,15-TETRAMETHYL-HEXADECANE)-SN-GLYCEROL non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C15 H32 212.415 PENTADECANE non-polymer C8 H18 114.229 N-OCTANE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C20 H28 O 284.436 RETINAL non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C13 H28 184.361 TRIDECANE LIPID FRAGMENT non-polymer C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C11 H24 156.308 UNDECANE LIPID FRAGMENT non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N C N 76 N C N 77 N C N 78 N C N 79 N C N 80 N C N 81 N C N 82 N C N 83 N C N 84 N C N 85 N C N 86 N C N 87 N C N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N C N 119 N C N 120 N C N 121 N C N 122 N C N 123 N C N 124 N C N 125 N C N 126 N C N 127 N C N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N C N 151 N C N 152 N C N 153 N C N 154 N C N 155 N C N 156 N C N 157 N C N 158 N C N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N N N 180 S C N 181 N C N 182 N O N 183 N C N 184 N C N 185 N C N 186 N O N 187 N N N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 N C N 204 N C N 205 N C N 206 N O N 207 N O N 208 N O N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N N N 219 N C N 220 N C N 221 N O N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N O N 229 N H N 230 N H N 231 N C N 232 N C N 233 N C N 234 N C N 235 N C N 236 N C N 237 N C N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 S C N 259 N C N 260 N C N 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N C N 277 N O N 278 R C N 279 N O N 280 N C N 281 N O N 282 N C N 283 N C N 284 R C N 285 N C N 286 N C N 287 N C N 288 N C N 289 R C N 290 N C N 291 N C N 292 N C N 293 N C N 294 R C N 295 N C N 296 N C N 297 N C N 298 N C N 299 N C N 300 N C N 301 N C N 302 N C N 303 N C N 304 R C N 305 N C N 306 N C N 307 N C N 308 N C N 309 R C N 310 N C N 311 N C N 312 N C N 313 N C N 314 R C N 315 N C N 316 N C N 317 N C N 318 N C N 319 N C N 320 N C N 321 N C N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 N C N 415 N C N 416 N C N 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N C N 440 N N N 441 N O N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N N N 458 S C N 459 N C N 460 N O N 461 N C N 462 N C N 463 N S N 464 N C N 465 N O N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N C N 478 N C N 479 N C N 480 N C N 481 N C N 482 N C N 483 N C N 484 N C N 485 N C N 486 N C N 487 N C N 488 N C N 489 N C N 490 N C N 491 N C N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N C N 525 N C N 526 N C N 527 N C N 528 N C N 529 N C N 530 N C N 531 N C N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N N N 551 S C N 552 N C N 553 N O N 554 N C Y 555 N C Y 556 N C Y 557 N C Y 558 N C Y 559 N C Y 560 N C N 561 N O N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N H N 573 N N N 574 S C N 575 N C N 576 N O N 577 N C N 578 N C N 579 N C N 580 N O N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N H N 587 N H N 588 N H N 589 N H N 590 N C N 591 N C N 592 N C N 593 N C N 594 N C N 595 N C N 596 N C N 597 N C N 598 N C N 599 N C N 600 N C N 601 N C N 602 N C N 603 N C N 604 N C N 605 N O N 606 N C N 607 N C N 608 N C N 609 N C N 610 N C N 611 N H N 612 N H N 613 N H N 614 N H N 615 N H N 616 N H N 617 N H N 618 N H N 619 N H N 620 N H N 621 N H N 622 N H N 623 N H N 624 N H N 625 N H N 626 N H N 627 N H N 628 N H N 629 N H N 630 N H N 631 N H N 632 N H N 633 N H N 634 N H N 635 N H N 636 N H N 637 N H N 638 N H N 639 N N N 640 S C N 641 N C N 642 N O N 643 N C N 644 N O N 645 N O N 646 N H N 647 N H N 648 N H N 649 N H N 650 N H N 651 N H N 652 N H N 653 N N N 654 S C N 655 N C N 656 N O N 657 R C N 658 N O N 659 N C N 660 N O N 661 N H N 662 N H N 663 N H N 664 N H N 665 N H N 666 N H N 667 N H N 668 N H N 669 N H N 670 N C N 671 N C N 672 N C N 673 N C N 674 N C N 675 N C N 676 N C N 677 N C N 678 N C N 679 N C N 680 N C N 681 N C N 682 N C N 683 N H N 684 N H N 685 N H N 686 N H N 687 N H N 688 N H N 689 N H N 690 N H N 691 N H N 692 N H N 693 N H N 694 N H N 695 N H N 696 N H N 697 N H N 698 N H N 699 N H N 700 N H N 701 N H N 702 N H N 703 N H N 704 N H N 705 N H N 706 N H N 707 N H N 708 N H N 709 N H N 710 N H N 711 N N N 712 S C N 713 N C N 714 N O N 715 N C Y 716 N C Y 717 N C Y 718 N C Y 719 N N Y 720 N C Y 721 N C Y 722 N C Y 723 N C Y 724 N C N 725 N O N 726 N H N 727 N H N 728 N H N 729 N H N 730 N H N 731 N H N 732 N H N 733 N H N 734 N H N 735 N H N 736 N H N 737 N H N 738 N N N 739 S C N 740 N C N 741 N O N 742 N C Y 743 N C Y 744 N C Y 745 N C Y 746 N C Y 747 N C Y 748 N C N 749 N O N 750 N O N 751 N H N 752 N H N 753 N H N 754 N H N 755 N H N 756 N H N 757 N H N 758 N H N 759 N H N 760 N H N 761 N H N 762 N C N 763 N C N 764 N C N 765 N C N 766 N C N 767 N C N 768 N C N 769 N C N 770 N C N 771 N C N 772 N C N 773 N H N 774 N H N 775 N H N 776 N H N 777 N H N 778 N H N 779 N H N 780 N H N 781 N H N 782 N H N 783 N H N 784 N H N 785 N H N 786 N H N 787 N H N 788 N H N 789 N H N 790 N H N 791 N H N 792 N H N 793 N H N 794 N H N 795 N H N 796 N H N 797 N N N 798 S C N 799 N C N 800 N O N 801 N C N 802 N C N 803 N C N 804 N O N 805 N H N 806 N H N 807 N H N 808 N H N 809 N H N 810 N H N 811 N H N 812 N H N 813 N H N 814 N H N 815 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N doub N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N doub N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N doub N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing N 533 N sing N 534 N sing N 535 N sing N 536 N sing N 537 N doub N 538 N sing N 539 N sing N 540 N sing N 541 N sing Y 542 N doub Y 543 N sing Y 544 N sing N 545 N sing Y 546 N doub N 547 N sing Y 548 N doub N 549 N sing Y 550 N sing N 551 N sing N 552 N sing N 553 N sing N 554 N sing N 555 N sing N 556 N sing N 557 N sing N 558 N sing N 559 N sing N 560 N doub N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N sing N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing N 580 N sing N 581 N sing N 582 N sing N 583 N sing N 584 N doub N 585 N sing N 586 N sing N 587 E doub N 588 N sing N 589 N sing N 590 N sing N 591 E doub N 592 N sing N 593 N sing N 594 N sing N 595 E doub N 596 N sing N 597 N sing N 598 N sing N 599 E doub N 600 N sing N 601 N sing N 602 N sing N 603 N doub N 604 N sing N 605 N sing N 606 N sing N 607 N sing N 608 N sing N 609 N sing N 610 N sing N 611 N sing N 612 N sing N 613 N sing N 614 N sing N 615 N sing N 616 N sing N 617 N sing N 618 N sing N 619 N sing N 620 N sing N 621 N sing N 622 N sing N 623 N sing N 624 N sing N 625 N sing N 626 N doub N 627 N sing N 628 N sing N 629 N sing N 630 N sing N 631 N sing N 632 N sing N 633 N sing N 634 N sing N 635 N sing N 636 N sing N 637 N sing N 638 N sing N 639 N doub N 640 N sing N 641 N sing N 642 N sing N 643 N sing N 644 N sing N 645 N sing N 646 N sing N 647 N sing N 648 N sing N 649 N sing N 650 N sing N 651 N sing N 652 N sing N 653 N sing N 654 N sing N 655 N sing N 656 N sing N 657 N sing N 658 N sing N 659 N sing N 660 N sing N 661 N sing N 662 N sing N 663 N sing N 664 N sing N 665 N sing N 666 N sing N 667 N sing N 668 N sing N 669 N sing N 670 N sing N 671 N sing N 672 N sing N 673 N sing N 674 N sing N 675 N sing N 676 N sing N 677 N sing N 678 N sing N 679 N sing N 680 N sing N 681 N sing N 682 N sing N 683 N sing N 684 N sing N 685 N sing N 686 N sing N 687 N sing N 688 N sing N 689 N sing N 690 N sing N 691 N sing N 692 N sing N 693 N sing N 694 N sing N 695 N doub N 696 N sing N 697 N sing N 698 N sing N 699 N sing Y 700 N doub Y 701 N sing Y 702 N sing N 703 N sing Y 704 N doub Y 705 N sing Y 706 N sing N 707 N sing Y 708 N sing Y 709 N doub N 710 N sing Y 711 N doub N 712 N sing Y 713 N sing N 714 N sing N 715 N sing N 716 N sing N 717 N sing N 718 N sing N 719 N sing N 720 N sing N 721 N sing N 722 N sing N 723 N doub N 724 N sing N 725 N sing N 726 N sing N 727 N sing Y 728 N doub Y 729 N sing Y 730 N sing N 731 N sing Y 732 N doub N 733 N sing Y 734 N doub N 735 N sing Y 736 N sing N 737 N sing N 738 N sing N 739 N sing N 740 N sing N 741 N sing N 742 N sing N 743 N sing N 744 N sing N 745 N sing N 746 N sing N 747 N sing N 748 N sing N 749 N sing N 750 N sing N 751 N sing N 752 N sing N 753 N sing N 754 N sing N 755 N sing N 756 N sing N 757 N sing N 758 N sing N 759 N sing N 760 N sing N 761 N sing N 762 N sing N 763 N sing N 764 N sing N 765 N sing N 766 N sing N 767 N sing N 768 N sing N 769 N sing N 770 N sing N 771 N sing N 772 N sing N 773 N sing N 774 N sing N 775 N sing N 776 N sing N 777 N sing N 778 N sing N 779 N sing N 780 N sing N 781 N doub N 782 N sing N 783 N sing N 784 N sing N 785 N sing N 786 N sing N 787 N sing N 788 N sing N 789 N sing N 790 N sing N 791 N sing N 792 N sing US Science SCIEAS 0038 1095-9203 354 1552 1557 10.1126/science.aah3497 28008064 A three-dimensional movie of structural changes in bacteriorhodopsin 2016 10.2210/pdb5h2j/pdb pdb_00005h2j 293 1 CCD 2016-02-05 MPCCD SINGLE WAVELENGTH M x-ray 1 1.63 1.0 BL3 SACLA 1.63 FREE ELECTRON LASER SACLA BEAMLINE BL3 26814.412 Bacteriorhodopsin UNP residues 14-261 1 nat polymer 284.436 RETINAL 1 syn non-polymer 653.157 2,3-DI-PHYTANYL-GLYCEROL 3 syn non-polymer 184.361 TRIDECANE 1 syn non-polymer 142.282 DECANE 1 syn non-polymer 100.202 HEPTANE 1 syn non-polymer 114.229 N-OCTANE 3 syn non-polymer 212.415 PENTADECANE 2 syn non-polymer 156.308 UNDECANE 2 syn non-polymer 128.255 nonane 1 syn non-polymer 198.388 TETRADECANE 1 syn non-polymer 18.015 water 18 nat water BR,Bacterioopsin,BO no no QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATS QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Halobacterium sp. NRC-1 sample 1 248 64091 Halobacterium salinarum NRC-1 NRC-1 1 2.35 47.77 LIPIDIC CUBIC PHASE 5.4 0.1M Na/K phosphate pH5.4, 30% PEG 2000 293 diffrn_source chem_comp_atom chem_comp_bond database_2 pdbx_related_exp_data_set pdbx_initial_refinement_model repository Initial release Database references Data collection Data collection Database references Refinement description 1 0 2016-12-21 1 1 2017-02-01 1 2 2018-01-31 1 3 2023-09-06 1 4 2023-11-08 _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site _database_2.pdbx_DOI _database_2.pdbx_database_accession N PDBJ Y PDBJ 2016-10-15 REL REL RET RETINAL L2P 2,3-DI-PHYTANYL-GLYCEROL TRD TRIDECANE D10 DECANE HP6 HEPTANE OCT N-OCTANE MYS PENTADECANE UND UNDECANE DD9 nonane C14 TETRADECANE HOH water 5B6V PDB experimental model RET 300 2 RET RET 300 A L2P 600 3 L2P L2P 600 A TRD 601 4 TRD TRD 601 A D10 602 5 D10 D10 602 A HP6 603 6 HP6 HP6 603 A OCT 604 7 OCT OCT 604 A OCT 605 7 OCT OCT 605 A MYS 606 8 MYS MYS 606 A UND 607 9 UND UND 607 A L2P 608 3 L2P L2P 608 A L2P 609 3 L2P L2P 609 A MYS 610 8 MYS MYS 610 A DD9 611 10 DD9 DD9 611 A C14 612 11 C14 C14 612 A OCT 613 7 OCT OCT 613 A UND 614 9 UND UND 614 A HOH 400 12 HOH HOH 400 A HOH 401 12 HOH HOH 401 A HOH 402 12 HOH HOH 402 A HOH 403 12 HOH HOH 403 A HOH 404 12 HOH HOH 404 A HOH 405 12 HOH HOH 405 A HOH 406 12 HOH HOH 406 A HOH 407 12 HOH HOH 407 A HOH 408 12 HOH HOH 408 A HOH 414 12 HOH HOH 414 A HOH 425 12 HOH HOH 425 A HOH 424 12 HOH HOH 424 A HOH 433 12 HOH HOH 433 A HOH 438 12 HOH HOH 438 A HOH 441 12 HOH HOH 441 A HOH 442 12 HOH HOH 442 A HOH 443 12 HOH HOH 443 A HOH 453 12 HOH HOH 453 A n 1 1 A n 2 2 A n 3 3 A ILE 4 n 4 ILE 4 A THR 5 n 5 THR 5 A GLY 6 n 6 GLY 6 A ARG 7 n 7 ARG 7 A PRO 8 n 8 PRO 8 A GLU 9 n 9 GLU 9 A TRP 10 n 10 TRP 10 A ILE 11 n 11 ILE 11 A TRP 12 n 12 TRP 12 A LEU 13 n 13 LEU 13 A ALA 14 n 14 ALA 14 A LEU 15 n 15 LEU 15 A GLY 16 n 16 GLY 16 A THR 17 n 17 THR 17 A ALA 18 n 18 ALA 18 A LEU 19 n 19 LEU 19 A MET 20 n 20 MET 20 A GLY 21 n 21 GLY 21 A LEU 22 n 22 LEU 22 A GLY 23 n 23 GLY 23 A THR 24 n 24 THR 24 A LEU 25 n 25 LEU 25 A TYR 26 n 26 TYR 26 A PHE 27 n 27 PHE 27 A LEU 28 n 28 LEU 28 A VAL 29 n 29 VAL 29 A LYS 30 n 30 LYS 30 A GLY 31 n 31 GLY 31 A MET 32 n 32 MET 32 A GLY 33 n 33 GLY 33 A VAL 34 n 34 VAL 34 A SER 35 n 35 SER 35 A ASP 36 n 36 ASP 36 A PRO 37 n 37 PRO 37 A ASP 38 n 38 ASP 38 A ALA 39 n 39 ALA 39 A LYS 40 n 40 LYS 40 A LYS 41 n 41 LYS 41 A PHE 42 n 42 PHE 42 A TYR 43 n 43 TYR 43 A ALA 44 n 44 ALA 44 A ILE 45 n 45 ILE 45 A THR 46 n 46 THR 46 A THR 47 n 47 THR 47 A LEU 48 n 48 LEU 48 A VAL 49 n 49 VAL 49 A PRO 50 n 50 PRO 50 A ALA 51 n 51 ALA 51 A ILE 52 n 52 ILE 52 A ALA 53 n 53 ALA 53 A PHE 54 n 54 PHE 54 A THR 55 n 55 THR 55 A MET 56 n 56 MET 56 A TYR 57 n 57 TYR 57 A LEU 58 n 58 LEU 58 A SER 59 n 59 SER 59 A MET 60 n 60 MET 60 A LEU 61 n 61 LEU 61 A LEU 62 n 62 LEU 62 A GLY 63 n 63 GLY 63 A TYR 64 n 64 TYR 64 A GLY 65 n 65 GLY 65 A LEU 66 n 66 LEU 66 A THR 67 n 67 THR 67 A MET 68 n 68 MET 68 A VAL 69 n 69 VAL 69 A PRO 70 n 70 PRO 70 A PHE 71 n 71 PHE 71 A GLY 72 n 72 GLY 72 A GLY 73 n 73 GLY 73 A GLU 74 n 74 GLU 74 A GLN 75 n 75 GLN 75 A ASN 76 n 76 ASN 76 A PRO 77 n 77 PRO 77 A ILE 78 n 78 ILE 78 A TYR 79 n 79 TYR 79 A TRP 80 n 80 TRP 80 A ALA 81 n 81 ALA 81 A ARG 82 n 82 ARG 82 A TYR 83 n 83 TYR 83 A ALA 84 n 84 ALA 84 A ASP 85 n 85 ASP 85 A TRP 86 n 86 TRP 86 A LEU 87 n 87 LEU 87 A PHE 88 n 88 PHE 88 A THR 89 n 89 THR 89 A THR 90 n 90 THR 90 A PRO 91 n 91 PRO 91 A LEU 92 n 92 LEU 92 A LEU 93 n 93 LEU 93 A LEU 94 n 94 LEU 94 A LEU 95 n 95 LEU 95 A ASP 96 n 96 ASP 96 A LEU 97 n 97 LEU 97 A ALA 98 n 98 ALA 98 A LEU 99 n 99 LEU 99 A LEU 100 n 100 LEU 100 A VAL 101 n 101 VAL 101 A ASP 102 n 102 ASP 102 A ALA 103 n 103 ALA 103 A ASP 104 n 104 ASP 104 A GLN 105 n 105 GLN 105 A GLY 106 n 106 GLY 106 A THR 107 n 107 THR 107 A ILE 108 n 108 ILE 108 A LEU 109 n 109 LEU 109 A ALA 110 n 110 ALA 110 A LEU 111 n 111 LEU 111 A VAL 112 n 112 VAL 112 A GLY 113 n 113 GLY 113 A ALA 114 n 114 ALA 114 A ASP 115 n 115 ASP 115 A GLY 116 n 116 GLY 116 A ILE 117 n 117 ILE 117 A MET 118 n 118 MET 118 A ILE 119 n 119 ILE 119 A GLY 120 n 120 GLY 120 A THR 121 n 121 THR 121 A GLY 122 n 122 GLY 122 A LEU 123 n 123 LEU 123 A VAL 124 n 124 VAL 124 A GLY 125 n 125 GLY 125 A ALA 126 n 126 ALA 126 A LEU 127 n 127 LEU 127 A THR 128 n 128 THR 128 A LYS 129 n 129 LYS 129 A VAL 130 n 130 VAL 130 A TYR 131 n 131 TYR 131 A SER 132 n 132 SER 132 A TYR 133 n 133 TYR 133 A ARG 134 n 134 ARG 134 A PHE 135 n 135 PHE 135 A VAL 136 n 136 VAL 136 A TRP 137 n 137 TRP 137 A TRP 138 n 138 TRP 138 A ALA 139 n 139 ALA 139 A ILE 140 n 140 ILE 140 A SER 141 n 141 SER 141 A THR 142 n 142 THR 142 A ALA 143 n 143 ALA 143 A ALA 144 n 144 ALA 144 A MET 145 n 145 MET 145 A LEU 146 n 146 LEU 146 A TYR 147 n 147 TYR 147 A ILE 148 n 148 ILE 148 A LEU 149 n 149 LEU 149 A TYR 150 n 150 TYR 150 A VAL 151 n 151 VAL 151 A LEU 152 n 152 LEU 152 A PHE 153 n 153 PHE 153 A PHE 154 n 154 PHE 154 A GLY 155 n 155 GLY 155 A PHE 156 n 156 PHE 156 A THR 157 n 157 THR 157 A SER 158 n 158 SER 158 A LYS 159 n 159 LYS 159 A ALA 160 n 160 ALA 160 A GLU 161 n 161 GLU 161 A SER 162 n 162 SER 162 A MET 163 n 163 MET 163 A ARG 164 n 164 ARG 164 A PRO 165 n 165 PRO 165 A GLU 166 n 166 GLU 166 A VAL 167 n 167 VAL 167 A ALA 168 n 168 ALA 168 A SER 169 n 169 SER 169 A THR 170 n 170 THR 170 A PHE 171 n 171 PHE 171 A LYS 172 n 172 LYS 172 A VAL 173 n 173 VAL 173 A LEU 174 n 174 LEU 174 A ARG 175 n 175 ARG 175 A ASN 176 n 176 ASN 176 A VAL 177 n 177 VAL 177 A THR 178 n 178 THR 178 A VAL 179 n 179 VAL 179 A VAL 180 n 180 VAL 180 A LEU 181 n 181 LEU 181 A TRP 182 n 182 TRP 182 A SER 183 n 183 SER 183 A ALA 184 n 184 ALA 184 A TYR 185 n 185 TYR 185 A PRO 186 n 186 PRO 186 A VAL 187 n 187 VAL 187 A VAL 188 n 188 VAL 188 A TRP 189 n 189 TRP 189 A LEU 190 n 190 LEU 190 A ILE 191 n 191 ILE 191 A GLY 192 n 192 GLY 192 A SER 193 n 193 SER 193 A GLU 194 n 194 GLU 194 A GLY 195 n 195 GLY 195 A ALA 196 n 196 ALA 196 A GLY 197 n 197 GLY 197 A ILE 198 n 198 ILE 198 A VAL 199 n 199 VAL 199 A PRO 200 n 200 PRO 200 A LEU 201 n 201 LEU 201 A ASN 202 n 202 ASN 202 A ILE 203 n 203 ILE 203 A GLU 204 n 204 GLU 204 A THR 205 n 205 THR 205 A LEU 206 n 206 LEU 206 A LEU 207 n 207 LEU 207 A PHE 208 n 208 PHE 208 A MET 209 n 209 MET 209 A VAL 210 n 210 VAL 210 A LEU 211 n 211 LEU 211 A ASP 212 n 212 ASP 212 A VAL 213 n 213 VAL 213 A SER 214 n 214 SER 214 A ALA 215 n 215 ALA 215 A LYS 216 n 216 LYS 216 A VAL 217 n 217 VAL 217 A GLY 218 n 218 GLY 218 A PHE 219 n 219 PHE 219 A GLY 220 n 220 GLY 220 A LEU 221 n 221 LEU 221 A ILE 222 n 222 ILE 222 A LEU 223 n 223 LEU 223 A LEU 224 n 224 LEU 224 A ARG 225 n 225 ARG 225 A SER 226 n 226 SER 226 A ARG 227 n 227 ARG 227 A ALA 228 n 228 ALA 228 A ILE 229 n 229 ILE 229 A PHE 230 n 230 PHE 230 A GLY 231 n 231 GLY 231 A GLU 232 n 232 GLU 232 A ALA 233 n 233 ALA 233 A GLU 234 n 234 GLU 234 A n 235 235 A n 236 236 A n 237 237 A n 238 238 A n 239 239 A n 240 240 A n 241 241 A n 242 242 A n 243 243 A n 244 244 A n 245 245 A n 246 246 A n 247 247 A n 248 248 A 10.11577/1337005 diffraction image data author_and_software_defined_assembly PISA 3 trimeric 25220 -117 28500 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_455 -y-1,x-y,z crystal symmetry operation -62.5000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_445 -x+y-1,-x-1,z crystal symmetry operation -31.2500000000 -54.1265877365 0.0000000000 A N THR 67 A N THR 67 A O ILE 78 A O ILE 78 1 A C3 L2P 600 C C3 L2P 1 1 N 1 A O3 L2P 600 C O3 L2P 1 1 N 1 A C12 L2P 600 C C12 L2P 1 1 N 1 A C13 L2P 600 C C13 L2P 1 1 N 1 A C14 L2P 600 C C14 L2P 1 1 N 1 A C15 L2P 600 C C15 L2P 1 1 N 1 A C16 L2P 600 C C16 L2P 1 1 N 1 A C17 L2P 600 C C17 L2P 1 1 N 1 A C18 L2P 600 C C18 L2P 1 1 N 1 A C19 L2P 600 C C19 L2P 1 1 N 1 A C20 L2P 600 C C20 L2P 1 1 N 1 A C21 L2P 600 C C21 L2P 1 1 N 1 A C22 L2P 600 C C22 L2P 1 1 N 1 A C23 L2P 600 C C23 L2P 1 1 N 1 A C24 L2P 600 C C24 L2P 1 1 N 1 A C25 L2P 600 C C25 L2P 1 1 N 1 A C26 L2P 600 C C26 L2P 1 1 N 1 A C27 L2P 600 C C27 L2P 1 1 N 1 A C28 L2P 600 C C28 L2P 1 1 N 1 A C29 L2P 600 C C29 L2P 1 1 N 1 A C30 L2P 600 C C30 L2P 1 1 N 1 A C2 L2P 608 K C2 L2P 1 1 N 1 A O2 L2P 608 K O2 L2P 1 1 N 1 A C3 L2P 608 K C3 L2P 1 1 N 1 A O3 L2P 608 K O3 L2P 1 1 N 1 A C41 L2P 608 K C41 L2P 1 1 N 1 A C42 L2P 608 K C42 L2P 1 1 N 1 A C43 L2P 608 K C43 L2P 1 1 N 1 A C44 L2P 608 K C44 L2P 1 1 N 1 A C45 L2P 608 K C45 L2P 1 1 N 1 A C46 L2P 608 K C46 L2P 1 1 N 1 A C47 L2P 608 K C47 L2P 1 1 N 1 A C48 L2P 608 K C48 L2P 1 1 N 1 A C49 L2P 608 K C49 L2P 1 1 N 1 A C50 L2P 608 K C50 L2P 1 1 N 1 A C51 L2P 608 K C51 L2P 1 1 N 1 A C52 L2P 608 K C52 L2P 1 1 N 1 A C53 L2P 608 K C53 L2P 1 1 N 1 A C54 L2P 608 K C54 L2P 1 1 N 1 A C55 L2P 608 K C55 L2P 1 1 N 1 A C56 L2P 608 K C56 L2P 1 1 N 1 A C57 L2P 608 K C57 L2P 1 1 N 1 A C58 L2P 608 K C58 L2P 1 1 N 1 A C59 L2P 608 K C59 L2P 1 1 N 1 A C60 L2P 608 K C60 L2P 1 1 N 1 A GLN 1 A GLN 1 1 Y 1 A ALA 2 A ALA 2 1 Y 1 A GLN 3 A GLN 3 1 Y 1 A ALA 235 A ALA 235 1 Y 1 A PRO 236 A PRO 236 1 Y 1 A GLU 237 A GLU 237 1 Y 1 A PRO 238 A PRO 238 1 Y 1 A SER 239 A SER 239 1 Y 1 A ALA 240 A ALA 240 1 Y 1 A GLY 241 A GLY 241 1 Y 1 A ASP 242 A ASP 242 1 Y 1 A GLY 243 A GLY 243 1 Y 1 A ALA 244 A ALA 244 1 Y 1 A ALA 245 A ALA 245 1 Y 1 A ALA 246 A ALA 246 1 Y 1 A THR 247 A THR 247 1 Y 1 A SER 248 A SER 248 1 Y 1 A VAL 217 B -140.62 -55.28 0.1729 0.1589 0.1597 2.100 21.912 719 14474 4.97 99.99 0.11 1 FREE R-VALUE 1.37 MOLECULAR REPLACEMENT 19.94 0.90 1.11 5B6V 2.100 21.912 18 2047 242 0 1787 0.003 2214 0.832 2957 16.962 1286 0.037 334 0.003 322 0.2423 0.2267 2.2621 144 2730 100.00 0.1687 0.1672 2.4895 131 2749 100.00 0.1774 0.1472 2.8491 142 2771 100.00 0.1617 0.1518 3.5870 143 2729 100.00 0.1709 0.1571 21.9128 159 2776 100.00 2.1 38.92 5H2J 14513 0.988 1 8.55 230 100 1 refinement PHENIX 1.10_2155 data reduction CrystFEL 0.6.2 data scaling CrystFEL 0.6.2 N A three dimensional movie of structural changes in bacteriorhodopsin: structure obtained 290 ns after photoexcitation 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 7 N N 7 N N 8 N N 9 N N 3 N N 3 N N 8 N N 10 N N 11 N N 7 N N 9 N N 12 N N A GLU 9 A GLU 9 HELX_P A GLY 31 A GLY 31 1 AA1 23 A ASP 36 A ASP 36 HELX_P A LEU 62 A LEU 62 1 AA2 27 A TRP 80 A TRP 80 HELX_P A VAL 101 A VAL 101 1 AA3 22 A ASP 104 A ASP 104 HELX_P A THR 128 A THR 128 1 AA4 25 A VAL 130 A VAL 130 HELX_P A PHE 154 A PHE 154 1 AA5 25 A PHE 156 A PHE 156 HELX_P A SER 162 A SER 162 1 AA6 7 A ARG 164 A ARG 164 HELX_P A GLY 192 A GLY 192 1 AA7 29 A PRO 200 A PRO 200 HELX_P A ARG 225 A ARG 225 1 AA8 26 A SER 226 A SER 226 HELX_P A PHE 230 A PHE 230 5 AA9 5 covale 1.311 one A A A LYS 216 A NZ LYS 216 1_555 A RET 300 B C15 RET 1_555 covale 1.310 one B B A LYS 216 A NZ LYS 216 1_555 A RET 300 B C15 RET 1_555 PROTON TRANSPORT bacteriorhodopsin, XFEL, time-resolved serial femtosecond crystallography, SACLA, PROTON TRANSPORT BACR_HALSA UNP 1 14 P02945 QAQITGRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFTMYLSMLLGYGLTMVPFGGEQNPIYW ARYADWLFTTPLLLLDLALLVDADQGTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFGFTSKA ESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIETLLFMVLDVSAKVGFGLILLRSRAIFGEAEAPEPSA GDGAAATS 14 261 5H2J 1 248 P02945 A 1 1 248 2 anti-parallel A LEU 66 A LEU 66 A PHE 71 A PHE 71 A GLU 74 A GLU 74 A TYR 79 A TYR 79 binding site for residue RET A 300 A RET 300 Software 10 binding site for residue L2P A 600 A L2P 600 Software 6 binding site for residue TRD A 601 A TRD 601 Software 2 binding site for residue D10 A 602 A D10 602 Software 3 binding site for residue HP6 A 603 A HP6 603 Software 1 binding site for residue OCT A 604 A OCT 604 Software 1 binding site for residue OCT A 605 A OCT 605 Software 1 binding site for residue MYS A 606 A MYS 606 Software 2 binding site for residue UND A 607 A UND 607 Software 1 binding site for residue L2P A 608 A L2P 608 Software 5 binding site for residue L2P A 609 A L2P 609 Software 12 binding site for residue MYS A 610 A MYS 610 Software 1 binding site for residue DD9 A 611 A DD9 611 Software 1 binding site for residue C14 A 612 A C14 612 Software 4 binding site for residue OCT A 613 A OCT 613 Software 1 A TRP 86 A TRP 86 10 1_555 A THR 90 A THR 90 10 1_555 A TRP 138 A TRP 138 10 1_555 A SER 141 A SER 141 10 1_555 A TRP 182 A TRP 182 10 1_555 A TYR 185 A TYR 185 10 1_555 A PRO 186 A PRO 186 10 1_555 A ASP 212 A ASP 212 10 1_555 A ALA 215 A ALA 215 10 1_555 A LYS 216 A LYS 216 10 1_555 A ALA 44 A ALA 44 6 2_455 A LEU 48 A LEU 48 6 2_455 A PHE 54 A PHE 54 6 2_455 A THR 107 A THR 107 6 1_555 A TYR 147 A TYR 147 6 1_555 A D10 602 E D10 6 2_455 A LEU 149 A LEU 149 2 1_555 A SER 183 A SER 183 2 1_555 A LEU 22 A LEU 22 3 1_555 A L2P 600 C L2P 3 3_445 A HP6 603 F HP6 3 1_555 A D10 602 E D10 1 1_555 A LYS 172 A LYS 172 1 1_555 A MYS 606 I MYS 1 1_555 A OCT 605 H OCT 2 1_555 A L2P 608 K L2P 2 2_555 A L2P 608 K L2P 1 1_555 A TYR 131 A TYR 131 5 1_555 A TRP 138 A TRP 138 5 1_555 A ILE 203 A ILE 203 5 3_555 A MYS 606 I MYS 5 3_555 A UND 607 J UND 5 1_555 A ILE 52 A ILE 52 12 1_555 A MET 56 A MET 56 12 1_555 A TYR 64 A TYR 64 12 1_555 A TRP 80 A TRP 80 12 1_555 A ALA 84 A ALA 84 12 1_555 A GLY 116 A GLY 116 12 3_445 A ILE 117 A ILE 117 12 3_445 A GLY 120 A GLY 120 12 3_445 A LEU 123 A LEU 123 12 3_445 A LEU 123 A LEU 123 12 1_555 A VAL 124 A VAL 124 12 3_445 A C14 612 O C14 12 3_445 A TYR 26 A TYR 26 1 1_555 A ARG 225 A ARG 225 1 1_555 A LEU 87 A LEU 87 4 1_555 A PRO 91 A PRO 91 4 1_555 A LEU 95 A LEU 95 4 1_555 A L2P 609 L L2P 4 2_455 A TYR 26 A TYR 26 1 1_555 173 P 63