0.011083 0.000000 0.000000 0.000000 0.011083 0.000000 0.000000 0.000000 0.011083 0.00000 0.00000 0.00000 White, K.I. Raman, A.S. Ranganathan, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 90.230 90.230 90.230 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C Y 221 N C Y 222 N C Y 223 N C Y 224 N C Y 225 N C Y 226 N C N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N C N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N O N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 R C N 275 N O N 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C Y 292 N C Y 293 N C Y 294 N C Y 295 N C Y 296 N C Y 297 N C N 298 N O N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N C N 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing Y 216 N doub Y 217 N sing Y 218 N sing N 219 N sing Y 220 N doub N 221 N sing Y 222 N doub N 223 N sing Y 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing Y 285 N doub Y 286 N sing Y 287 N sing N 288 N sing Y 289 N doub N 290 N sing Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 166 468 480 10.1016/j.cell.2016.05.047 27321669 Origins of Allostery and Evolvability in Proteins: A Case Study. 2016 10.2210/pdb5hey/pdb pdb_00005hey 100 1 CCD 2012-10-18 ADSC QUANTUM 315r SINGLE WAVELENGTH M x-ray 1 0.97929 1.0 19-ID APS 0.97929 SYNCHROTRON APS BEAMLINE 19-ID 12782.120 Disks large homolog 4 PDZ-3 domain (UNP residues 302-402) G330T 1 man polymer 1070.196 Cysteine-rich PDZ-binding protein PDZ3-binding domain (UNP residues 93-101) 1 syn polymer 18.015 water 147 nat water Postsynaptic density protein 95,PSD-95,Synapse-associated protein 90,SAP90 Cysteine-rich interactor of PDZ three,Cysteine-rich interactor of PDZ3 no no GSPEFLGEEDIPREPRRIVIHRGSTGLGFNIVGTEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAA IALKNAGQTVTIIAQYKPEEYSRFEANSRVDSSGRIVTD GSPEFLGEEDIPREPRRIVIHRGSTGLGFNIVGTEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAA IALKNAGQTVTIIAQYKPEEYSRFEANSRVDSSGRIVTD A polypeptide(L) no no TKNYKQTSV TKNYKQTSV B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Rat sample 1 119 Dlg4, Dlgh4, Psd95 10116 Rattus norvegicus 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pGEX-4T-1 1 2.21 44.4 VAPOR DIFFUSION, HANGING DROP 7.0 Peptide was included in protein buffer to a final molar ratio of 2:1 relative to protein. Reservoir solution contained 1.2 M sodium citrate, pH 7.0. Equal amounts (1.5 microliters) of protein (8 mg/mL) and reservoir solution were mixed and equillibrated against 500 microliters of crystallization buffer. 289 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_oper_list repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2016-11-16 1 1 2023-09-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_oper_list.symmetry_operation United States Robert A. Welch Foundation I-1366 N RCSB Y RCSB 2016-01-06 REL REL 1 A O HOH 642 6.44 HOH water 10116 Rat Rattus norvegicus sample 1 9 1BE9 PDB experimental model HOH 131 3 HOH HOH 501 A HOH 48 3 HOH HOH 502 A HOH 64 3 HOH HOH 503 A HOH 54 3 HOH HOH 504 A HOH 101 3 HOH HOH 505 A HOH 76 3 HOH HOH 506 A HOH 53 3 HOH HOH 507 A HOH 55 3 HOH HOH 508 A HOH 149 3 HOH HOH 509 A HOH 126 3 HOH HOH 510 A HOH 79 3 HOH HOH 511 A HOH 43 3 HOH HOH 512 A HOH 115 3 HOH HOH 513 A HOH 95 3 HOH HOH 514 A HOH 9 3 HOH HOH 515 A HOH 99 3 HOH HOH 516 A HOH 15 3 HOH HOH 517 A HOH 4 3 HOH HOH 518 A HOH 21 3 HOH HOH 519 A HOH 72 3 HOH HOH 520 A HOH 45 3 HOH HOH 521 A HOH 148 3 HOH HOH 522 A HOH 153 3 HOH HOH 523 A HOH 38 3 HOH HOH 524 A HOH 29 3 HOH HOH 525 A HOH 58 3 HOH HOH 526 A HOH 61 3 HOH HOH 527 A HOH 56 3 HOH HOH 528 A HOH 91 3 HOH HOH 529 A HOH 1 3 HOH HOH 530 A HOH 71 3 HOH HOH 531 A HOH 16 3 HOH HOH 532 A HOH 65 3 HOH HOH 533 A HOH 33 3 HOH HOH 534 A HOH 60 3 HOH HOH 535 A HOH 20 3 HOH HOH 536 A HOH 18 3 HOH HOH 537 A HOH 96 3 HOH HOH 538 A HOH 12 3 HOH HOH 539 A HOH 69 3 HOH HOH 540 A HOH 28 3 HOH HOH 541 A HOH 118 3 HOH HOH 542 A HOH 6 3 HOH HOH 543 A HOH 31 3 HOH HOH 544 A HOH 140 3 HOH HOH 545 A HOH 10 3 HOH HOH 546 A HOH 117 3 HOH HOH 547 A HOH 46 3 HOH HOH 548 A HOH 40 3 HOH HOH 549 A HOH 143 3 HOH HOH 550 A HOH 44 3 HOH HOH 551 A HOH 124 3 HOH HOH 552 A HOH 47 3 HOH HOH 553 A HOH 24 3 HOH HOH 554 A HOH 7 3 HOH HOH 555 A HOH 136 3 HOH HOH 556 A HOH 74 3 HOH HOH 557 A HOH 35 3 HOH HOH 558 A HOH 109 3 HOH HOH 559 A HOH 32 3 HOH HOH 560 A HOH 125 3 HOH HOH 561 A HOH 19 3 HOH HOH 562 A HOH 67 3 HOH HOH 563 A HOH 41 3 HOH HOH 564 A HOH 87 3 HOH HOH 565 A HOH 112 3 HOH HOH 566 A HOH 5 3 HOH HOH 567 A HOH 3 3 HOH HOH 568 A HOH 23 3 HOH HOH 569 A HOH 42 3 HOH HOH 570 A HOH 26 3 HOH HOH 571 A HOH 52 3 HOH HOH 572 A HOH 77 3 HOH HOH 573 A HOH 119 3 HOH HOH 574 A HOH 78 3 HOH HOH 575 A HOH 17 3 HOH HOH 576 A HOH 92 3 HOH HOH 577 A HOH 100 3 HOH HOH 578 A HOH 57 3 HOH HOH 579 A HOH 27 3 HOH HOH 580 A HOH 59 3 HOH HOH 581 A HOH 80 3 HOH HOH 582 A HOH 93 3 HOH HOH 583 A HOH 98 3 HOH HOH 584 A HOH 30 3 HOH HOH 585 A HOH 14 3 HOH HOH 586 A HOH 86 3 HOH HOH 587 A HOH 8 3 HOH HOH 588 A HOH 51 3 HOH HOH 589 A HOH 37 3 HOH HOH 590 A HOH 70 3 HOH HOH 591 A HOH 97 3 HOH HOH 592 A HOH 116 3 HOH HOH 593 A HOH 11 3 HOH HOH 594 A HOH 144 3 HOH HOH 595 A HOH 50 3 HOH HOH 596 A HOH 104 3 HOH HOH 597 A HOH 84 3 HOH HOH 598 A HOH 39 3 HOH HOH 599 A HOH 2 3 HOH HOH 600 A HOH 85 3 HOH HOH 601 A HOH 22 3 HOH HOH 602 A HOH 36 3 HOH HOH 603 A HOH 66 3 HOH HOH 604 A HOH 121 3 HOH HOH 605 A HOH 151 3 HOH HOH 606 A HOH 34 3 HOH HOH 607 A HOH 88 3 HOH HOH 608 A HOH 145 3 HOH HOH 609 A HOH 114 3 HOH HOH 610 A HOH 110 3 HOH HOH 611 A HOH 147 3 HOH HOH 612 A HOH 62 3 HOH HOH 613 A HOH 83 3 HOH HOH 614 A HOH 89 3 HOH HOH 615 A HOH 103 3 HOH HOH 616 A HOH 113 3 HOH HOH 617 A HOH 13 3 HOH HOH 618 A HOH 141 3 HOH HOH 619 A HOH 107 3 HOH HOH 620 A HOH 73 3 HOH HOH 621 A HOH 25 3 HOH HOH 622 A HOH 138 3 HOH HOH 623 A HOH 82 3 HOH HOH 624 A HOH 150 3 HOH HOH 625 A HOH 146 3 HOH HOH 626 A HOH 90 3 HOH HOH 627 A HOH 111 3 HOH HOH 628 A HOH 106 3 HOH HOH 629 A HOH 130 3 HOH HOH 630 A HOH 142 3 HOH HOH 631 A HOH 94 3 HOH HOH 632 A HOH 135 3 HOH HOH 633 A HOH 81 3 HOH HOH 634 A HOH 122 3 HOH HOH 635 A HOH 129 3 HOH HOH 636 A HOH 120 3 HOH HOH 637 A HOH 139 3 HOH HOH 638 A HOH 105 3 HOH HOH 639 A HOH 123 3 HOH HOH 640 A HOH 108 3 HOH HOH 641 A HOH 102 3 HOH HOH 642 A HOH 128 3 HOH HOH 101 B HOH 68 3 HOH HOH 102 B HOH 63 3 HOH HOH 103 B HOH 49 3 HOH HOH 104 B HOH 75 3 HOH HOH 105 B GLY 297 n 1 GLY 297 A SER 298 n 2 SER 298 A PRO 299 n 3 PRO 299 A GLU 300 n 4 GLU 300 A PHE 301 n 5 PHE 301 A LEU 302 n 6 LEU 302 A GLY 303 n 7 GLY 303 A GLU 304 n 8 GLU 304 A GLU 305 n 9 GLU 305 A ASP 306 n 10 ASP 306 A ILE 307 n 11 ILE 307 A PRO 308 n 12 PRO 308 A ARG 309 n 13 ARG 309 A GLU 310 n 14 GLU 310 A PRO 311 n 15 PRO 311 A ARG 312 n 16 ARG 312 A ARG 313 n 17 ARG 313 A ILE 314 n 18 ILE 314 A VAL 315 n 19 VAL 315 A ILE 316 n 20 ILE 316 A HIS 317 n 21 HIS 317 A ARG 318 n 22 ARG 318 A GLY 319 n 23 GLY 319 A SER 320 n 24 SER 320 A THR 321 n 25 THR 321 A GLY 322 n 26 GLY 322 A LEU 323 n 27 LEU 323 A GLY 324 n 28 GLY 324 A PHE 325 n 29 PHE 325 A ASN 326 n 30 ASN 326 A ILE 327 n 31 ILE 327 A VAL 328 n 32 VAL 328 A GLY 329 n 33 GLY 329 A THR 330 n 34 THR 330 A GLU 331 n 35 GLU 331 A ASP 332 n 36 ASP 332 A GLY 333 n 37 GLY 333 A GLU 334 n 38 GLU 334 A GLY 335 n 39 GLY 335 A ILE 336 n 40 ILE 336 A PHE 337 n 41 PHE 337 A ILE 338 n 42 ILE 338 A SER 339 n 43 SER 339 A PHE 340 n 44 PHE 340 A ILE 341 n 45 ILE 341 A LEU 342 n 46 LEU 342 A ALA 343 n 47 ALA 343 A GLY 344 n 48 GLY 344 A GLY 345 n 49 GLY 345 A PRO 346 n 50 PRO 346 A ALA 347 n 51 ALA 347 A ASP 348 n 52 ASP 348 A LEU 349 n 53 LEU 349 A SER 350 n 54 SER 350 A GLY 351 n 55 GLY 351 A GLU 352 n 56 GLU 352 A LEU 353 n 57 LEU 353 A ARG 354 n 58 ARG 354 A LYS 355 n 59 LYS 355 A GLY 356 n 60 GLY 356 A ASP 357 n 61 ASP 357 A GLN 358 n 62 GLN 358 A ILE 359 n 63 ILE 359 A LEU 360 n 64 LEU 360 A SER 361 n 65 SER 361 A VAL 362 n 66 VAL 362 A ASN 363 n 67 ASN 363 A GLY 364 n 68 GLY 364 A VAL 365 n 69 VAL 365 A ASP 366 n 70 ASP 366 A LEU 367 n 71 LEU 367 A ARG 368 n 72 ARG 368 A ASN 369 n 73 ASN 369 A ALA 370 n 74 ALA 370 A SER 371 n 75 SER 371 A HIS 372 n 76 HIS 372 A GLU 373 n 77 GLU 373 A GLN 374 n 78 GLN 374 A ALA 375 n 79 ALA 375 A ALA 376 n 80 ALA 376 A ILE 377 n 81 ILE 377 A ALA 378 n 82 ALA 378 A LEU 379 n 83 LEU 379 A LYS 380 n 84 LYS 380 A ASN 381 n 85 ASN 381 A ALA 382 n 86 ALA 382 A GLY 383 n 87 GLY 383 A GLN 384 n 88 GLN 384 A THR 385 n 89 THR 385 A VAL 386 n 90 VAL 386 A THR 387 n 91 THR 387 A ILE 388 n 92 ILE 388 A ILE 389 n 93 ILE 389 A ALA 390 n 94 ALA 390 A GLN 391 n 95 GLN 391 A TYR 392 n 96 TYR 392 A LYS 393 n 97 LYS 393 A PRO 394 n 98 PRO 394 A GLU 395 n 99 GLU 395 A GLU 396 n 100 GLU 396 A TYR 397 n 101 TYR 397 A SER 398 n 102 SER 398 A ARG 399 n 103 ARG 399 A PHE 400 n 104 PHE 400 A GLU 401 n 105 GLU 401 A ALA 402 n 106 ALA 402 A ASN 403 n 107 ASN 403 A SER 404 n 108 SER 404 A ARG 405 n 109 ARG 405 A VAL 406 n 110 VAL 406 A ASP 407 n 111 ASP 407 A SER 408 n 112 SER 408 A SER 409 n 113 SER 409 A GLY 410 n 114 GLY 410 A ARG 411 n 115 ARG 411 A ILE 412 n 116 ILE 412 A VAL 413 n 117 VAL 413 A THR 414 n 118 THR 414 A ASP 415 n 119 ASP 415 A n 1 1 B LYS 2 n 2 LYS 2 B ASN 3 n 3 ASN 3 B TYR 4 n 4 TYR 4 B LYS 5 n 5 LYS 5 B GLN 6 n 6 GLN 6 B THR 7 n 7 THR 7 B SER 8 n 8 SER 8 B VAL 9 n 9 VAL 9 B 0.0247 0.0175 0.0311 0.0380 -0.0303 0.0859 -0.2583 -0.2419 -0.5942 0.2802 -0.1434 0.6248 -0.0235 -0.3956 -0.0000 0.3571 -0.0245 -0.0104 0.4108 0.1050 0.5335 refined 50.4276 70.1734 39.3116 X-RAY DIFFRACTION 0.0231 0.0226 -0.0376 0.0595 0.0030 0.0386 0.0535 -0.2907 -0.2856 0.0952 0.5931 0.3685 0.2915 0.4888 -0.0000 0.2945 -0.0150 -0.0102 0.5568 -0.0760 0.5726 refined 54.6880 63.4327 44.9411 X-RAY DIFFRACTION 0.4742 -0.0321 -0.4079 0.4232 0.1752 0.4234 -0.3192 -0.1169 -0.0735 0.3513 0.1962 -0.4993 -0.1919 0.4063 -0.0678 0.2115 -0.0485 -0.0930 0.2044 0.0221 0.2551 refined 49.8172 61.5835 46.3906 X-RAY DIFFRACTION 0.0800 0.1284 -0.1196 0.1798 -0.1729 0.1286 -0.0567 -0.1516 0.1643 0.1396 0.0131 -0.1817 -0.1775 -0.0062 0.0000 0.1656 0.0088 -0.0086 0.1453 0.0058 0.0989 refined 38.9291 63.1904 43.7650 X-RAY DIFFRACTION 0.2872 -0.1709 -0.1652 0.0533 0.0888 0.0892 -0.1350 0.2710 0.2212 0.1410 -0.1265 -0.0580 -0.9145 -0.0771 -0.1105 0.2119 -0.0017 -0.0041 0.1760 0.0680 0.1230 refined 36.4204 73.0585 27.4521 X-RAY DIFFRACTION 0.3187 -0.2444 0.2166 0.5659 0.1068 0.3653 0.0567 0.3246 0.0318 0.0739 -0.1961 -0.1312 0.1428 -0.1093 -0.0308 0.1198 -0.0226 0.0164 0.1538 0.0010 0.1032 refined 40.0830 59.7380 26.2900 X-RAY DIFFRACTION 0.1837 0.4359 0.0448 1.0106 0.1625 0.0596 -0.1344 -0.1337 -0.3258 -0.5032 -0.2847 0.1498 0.2176 -0.1269 -0.5053 0.1341 -0.2555 -0.0661 -0.0768 -0.0184 0.3610 refined 33.1740 47.6696 31.3353 X-RAY DIFFRACTION 0.1413 -0.1093 0.0769 0.2243 -0.0593 0.4179 0.0722 0.0064 0.0429 0.0554 -0.1308 -0.1437 -0.0496 0.0603 -0.0180 0.0969 -0.0171 0.0049 0.1268 0.0188 0.1096 refined 44.3559 63.6224 28.5422 X-RAY DIFFRACTION 0.2996 0.1345 -0.0040 0.1525 -0.2103 0.5001 0.1195 -0.0516 0.1954 0.1172 -0.1733 -0.1619 -0.2412 0.0989 -0.0001 0.1552 -0.0204 -0.0072 0.1186 0.0264 0.1691 refined 43.8113 65.9532 34.9639 X-RAY DIFFRACTION 0.2351 0.1025 -0.2318 0.3157 0.2869 0.3378 -0.0026 0.0497 -0.0613 -0.0622 0.0219 0.3160 0.1251 -0.2435 0.0209 0.0999 -0.0127 -0.0116 0.1712 0.0238 0.1389 refined 29.8701 59.1545 33.6674 X-RAY DIFFRACTION 0.0571 -0.0688 0.0780 0.3263 -0.2440 0.1839 -0.1258 0.5143 -0.0907 -0.3977 0.4570 0.5329 -0.0280 -0.4105 0.1076 0.1284 -0.0391 -0.0428 0.2702 0.0350 0.1422 refined 30.6426 58.8091 23.6879 X-RAY DIFFRACTION 0.9077 1.2960 0.0372 2.0757 0.1712 0.0683 -0.0709 0.1762 0.0321 0.2123 0.6422 0.2695 -0.3775 -0.4874 0.5887 0.3092 0.1240 0.0319 0.2985 0.1619 0.1996 refined 29.9831 72.3195 24.9525 X-RAY DIFFRACTION 0.5517 -0.2529 -0.7435 0.3138 0.2140 1.0647 -0.0452 -0.0035 -0.1256 0.0732 0.0705 0.0840 0.0481 -0.1299 0.0413 0.0988 -0.0019 -0.0093 0.1057 0.0126 0.1044 refined 39.3776 59.2843 37.2302 X-RAY DIFFRACTION 0.1482 -0.0715 0.0324 0.1458 0.0797 0.3343 -0.0917 -0.1736 0.1733 0.0619 0.1333 0.3095 0.0481 -0.5067 0.0134 0.2365 -0.0222 0.0327 0.2111 -0.0189 0.1274 refined 46.0995 47.5099 32.7856 X-RAY DIFFRACTION 0.5801 0.5420 -0.3045 0.6393 -0.4955 0.3587 0.0208 0.0822 0.1516 0.0155 -0.0552 -0.3410 0.0251 0.1495 -0.0001 0.1564 -0.0017 -0.0125 0.1280 -0.0005 0.1241 refined 53.8070 51.8707 38.2074 X-RAY DIFFRACTION 0.2234 0.0917 -0.1640 0.6061 -0.1909 0.3660 -0.0920 0.1841 -0.3858 -0.9512 0.0581 0.1589 0.5119 0.0615 -0.0029 0.2777 -0.0028 -0.0294 0.2426 -0.0421 0.2787 refined 39.2851 51.8451 23.5241 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 (chain A and resid 297:300) X-RAY DIFFRACTION 2 (chain A and resid 301:304) X-RAY DIFFRACTION 3 (chain A and resid 305:308) X-RAY DIFFRACTION 4 (chain A and resid 309:313) X-RAY DIFFRACTION 5 (chain A and resid 314:321) X-RAY DIFFRACTION 6 (chain A and resid 322:329) X-RAY DIFFRACTION 7 (chain A and resid 330:335) X-RAY DIFFRACTION 8 (chain A and resid 336:348) X-RAY DIFFRACTION 9 (chain A and resid 349:358) X-RAY DIFFRACTION 10 (chain A and resid 359:371) X-RAY DIFFRACTION 11 (chain A and resid 372:380) X-RAY DIFFRACTION 12 (chain A and resid 381:384) X-RAY DIFFRACTION 13 (chain A and resid 385:397) X-RAY DIFFRACTION 14 (chain A and resid 398:402) X-RAY DIFFRACTION 15 (chain A and resid 403:415) X-RAY DIFFRACTION 16 (chain B) author_and_software_defined_assembly PISA 2 dimeric 920 -4 6930 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 314 A N ILE 18 A O ILE 388 A O ILE 92 A O GLN 391 A O GLN 95 A N GLN 358 A N GLN 62 A N VAL 362 A N VAL 66 A O VAL 365 A O VAL 69 A O PHE 337 A O PHE 41 A N VAL 328 A N VAL 32 A N ILE 327 A N ILE 31 B O THR 7 B O THR 7 A N ARG 405 A N ARG 109 A O VAL 413 A O VAL 117 1 A HOH 642 C HOH 1 B HOH 101 D HOH 1 A CG GLU 331 A CG GLU 35 1 Y 1 A CD GLU 331 A CD GLU 35 1 Y 1 A OE1 GLU 331 A OE1 GLU 35 1 Y 1 A OE2 GLU 331 A OE2 GLU 35 1 Y 1 B THR 1 B THR 1 1 Y 1 B B HH HE21 TYR GLN 4 6 1.15 1 A A O O GLU HOH 334 501 2.06 B 1 A A O O HOH HOH 605 610 2.08 1 A A O O HOH HOH 504 599 2.09 1 A A O O HOH HOH 520 610 2.09 1 A A O O GLU HOH 334 501 2.18 A 1 A GLY 333 -43.71 1 A GLY 333 -44.34 1 A GLU 334 -12.63 A 1 -14.23 1.80 120.60 106.37 A A A CA C O GLY GLY GLY 333 333 333 N 1 17.64 2.20 117.20 134.84 A A A CA C N GLY GLY GLU 333 333 334 A Y 1 23.04 2.20 117.20 140.24 A A A CA C N GLY GLY GLU 333 333 334 B Y 1 -28.46 1.60 122.70 94.24 A A A O C N GLY GLY GLU 333 333 334 A Y 1 -29.77 1.60 122.70 92.93 A A A O C N GLY GLY GLU 333 333 334 B Y 1 A SER 320 -112.46 53.00 1 A THR 330 -73.10 -106.68 1 A THR 330 -118.32 -106.68 1 A LEU 349 A -69.19 2.35 0.2026 0.1724 0.1754 1.500 28.533 2024 20266 9.99 97.95 0.15 random selection 1 FREE R-VALUE 1.48 MOLECULAR REPLACEMENT 19.79 0.90 1.11 1BE9 ML FLAT BULK SOLVENT MODEL 1.500 28.533 147 1112 0 0 965 0.011 1151 1.843 1580 19.935 443 0.057 172 0.017 224 0.2854 0.2704 1.5378 112 1010 78.00 0.2538 0.2546 1.5794 137 1230 95.00 0.2787 0.2322 1.6259 139 1275 99.00 0.2457 0.2179 1.6783 144 1292 100.00 0.2546 0.2180 1.7383 144 1303 100.00 0.2452 0.1968 1.8079 146 1306 100.00 0.2234 0.1805 1.8902 145 1313 100.00 0.1966 0.1732 1.9898 146 1316 100.00 0.2211 0.1638 2.1144 146 1317 100.00 0.1931 0.1489 2.2776 149 1336 100.00 0.1876 0.1507 2.5067 149 1340 100.00 0.1914 0.1539 2.8691 149 1337 100.00 0.1708 0.1551 3.6136 154 1387 100.00 0.1890 0.1708 28.5384 164 1480 100.00 1.500 28.533 5HEY 20266 0.110 1 30.057 21.9 97.95 1.5003 1.5378 1 14.7 78 refinement PHENIX 1.10pre_2104 data reduction HKL-2000 data scaling HKL-2000 phasing PHENIX model building Coot The third PDZ domain from the synaptic protein PSD-95 (G330T mutant) in complex with a C-terminal peptide derived from CRIPT 1 N N 2 N N 3 N N 3 N N A ALA 347 A ALA 51 HELX_P A GLY 351 A GLY 55 5 AA1 5 A SER 371 A SER 75 HELX_P A ASN 381 A ASN 85 1 AA2 11 A LYS 393 A LYS 97 HELX_P A ARG 399 A ARG 103 1 AA3 7 PEPTIDE BINDING PROTEIN PDZ, GLGF, DHR, adhesion, synapse, synaptic density, peptide-binding domain, PEPTIDE BINDING PROTEIN DLG4_RAT UNP 1 302 P31016 LGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN AGQTVTIIAQYKPEEYSRFEA CRIPT_RAT UNP 2 93 Q792Q4 TKNYKQTSV 302 402 5HEY 302 402 P31016 A 1 6 106 93 101 5HEY 1 9 Q792Q4 B 2 1 9 1 expression tag GLY 297 5HEY A P31016 UNP 1 1 expression tag SER 298 5HEY A P31016 UNP 2 1 expression tag PRO 299 5HEY A P31016 UNP 3 1 expression tag GLU 300 5HEY A P31016 UNP 4 1 expression tag PHE 301 5HEY A P31016 UNP 5 1 GLY engineered mutation THR 330 5HEY A P31016 UNP 330 34 1 expression tag ASN 403 5HEY A P31016 UNP 107 1 expression tag SER 404 5HEY A P31016 UNP 108 1 expression tag ARG 405 5HEY A P31016 UNP 109 1 expression tag VAL 406 5HEY A P31016 UNP 110 1 expression tag ASP 407 5HEY A P31016 UNP 111 1 expression tag SER 408 5HEY A P31016 UNP 112 1 expression tag SER 409 5HEY A P31016 UNP 113 1 expression tag GLY 410 5HEY A P31016 UNP 114 1 expression tag ARG 411 5HEY A P31016 UNP 115 1 expression tag ILE 412 5HEY A P31016 UNP 116 1 expression tag VAL 413 5HEY A P31016 UNP 117 1 expression tag THR 414 5HEY A P31016 UNP 118 1 expression tag ASP 415 5HEY A P31016 UNP 119 4 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 312 A ARG 16 A HIS 317 A HIS 21 A THR 385 A THR 89 A TYR 392 A TYR 96 A ASP 357 A ASP 61 A VAL 362 A VAL 66 A VAL 365 A VAL 69 A ASP 366 A ASP 70 A PHE 337 A PHE 41 A ILE 341 A ILE 45 A PHE 325 A PHE 29 A VAL 328 A VAL 32 B GLN 6 B GLN 6 B SER 8 B SER 8 A SER 404 A SER 108 A VAL 406 A VAL 110 A ILE 412 A ILE 116 A THR 414 A THR 118 213 P 41 3 2