0.011162 0.000000 0.000000 0.000000 0.011162 0.000000 0.000000 0.000000 0.011162 0.00000 0.00000 0.00000 White, K.I. Raman, A.S. Ranganathan, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 89.592 89.592 89.592 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C Y 221 N C Y 222 N C Y 223 N C Y 224 N C Y 225 N C Y 226 N C N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N C N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N O N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 R C N 275 N O N 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C Y 292 N C Y 293 N C Y 294 N C Y 295 N C Y 296 N C Y 297 N C N 298 N O N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N C N 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing Y 216 N doub Y 217 N sing Y 218 N sing N 219 N sing Y 220 N doub N 221 N sing Y 222 N doub N 223 N sing Y 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing Y 285 N doub Y 286 N sing Y 287 N sing N 288 N sing Y 289 N doub N 290 N sing Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 166 468 480 10.1016/j.cell.2016.05.047 27321669 Origins of Allostery and Evolvability in Proteins: A Case Study. 2016 10.2210/pdb5hfb/pdb pdb_00005hfb 100 1 IMAGE PLATE 2012-09-20 RIGAKU RAXIS IV++ SINGLE WAVELENGTH M x-ray 1 1.54178 1.0 1.54178 ROTATING ANODE RIGAKU FR-E SUPERBRIGHT 12670.998 Disks large homolog 4 PDZ-3 domain (UNP residues 302-402) H372A 1 man polymer Synthesized using standard FMOC chemistry, HPCL purified, and lyophilized. 1070.196 Cysteine-rich PDZ-binding protein PDZ3-binding domain (UNP residues 93-101) 1 syn polymer 18.015 water 148 nat water Postsynaptic density protein 95,PSD-95,Synapse-associated protein 90,SAP90 Cysteine-rich interactor of PDZ three,Cysteine-rich interactor of PDZ3 no no GSPEFLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASAEQAA IALKNAGQTVTIIAQYKPEEYSRFEANSRVDSSGRIVTD GSPEFLGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASAEQAA IALKNAGQTVTIIAQYKPEEYSRFEANSRVDSSGRIVTD A polypeptide(L) no no TKNYKQTSV TKNYKQTSV B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Rat sample 1 119 Dlg4, Dlgh4, Psd95 10116 Rattus norvegicus 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pGEX-4T-1 1 2.17 43.2 VAPOR DIFFUSION, HANGING DROP 7.0 Peptide was included in protein buffer to a final molar ratio of 2:1 relative to protein. Reservoir solution contained 1.2 M sodium citrate, pH 7.0. Equal amounts (1.5 microliters) of protein (8 mg/mL) and reservoir solution were mixed and equillibrated against 500 microliters of crystallization buffer. 289 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_oper_list repository Initial release Data collection Database references Derived calculations Refinement description 1 0 2016-11-16 1 1 2023-09-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_oper_list.symmetry_operation United States Robert A. Welch Foundation I-1366 N RCSB Y RCSB 2016-01-06 REL REL HOH water 10116 Rat Rattus norvegicus sample 1 9 1BE9 PDB experimental model HOH 141 3 HOH HOH 501 A HOH 136 3 HOH HOH 502 A HOH 135 3 HOH HOH 503 A HOH 129 3 HOH HOH 504 A HOH 63 3 HOH HOH 505 A HOH 55 3 HOH HOH 506 A HOH 110 3 HOH HOH 507 A HOH 30 3 HOH HOH 508 A HOH 119 3 HOH HOH 509 A HOH 76 3 HOH HOH 510 A HOH 137 3 HOH HOH 511 A HOH 71 3 HOH HOH 512 A HOH 19 3 HOH HOH 513 A HOH 57 3 HOH HOH 514 A HOH 97 3 HOH HOH 515 A HOH 16 3 HOH HOH 516 A HOH 105 3 HOH HOH 517 A HOH 69 3 HOH HOH 518 A HOH 65 3 HOH HOH 519 A HOH 21 3 HOH HOH 520 A HOH 22 3 HOH HOH 521 A HOH 61 3 HOH HOH 522 A HOH 13 3 HOH HOH 523 A HOH 20 3 HOH HOH 524 A HOH 62 3 HOH HOH 525 A HOH 26 3 HOH HOH 526 A HOH 120 3 HOH HOH 527 A HOH 88 3 HOH HOH 528 A HOH 152 3 HOH HOH 529 A HOH 25 3 HOH HOH 530 A HOH 106 3 HOH HOH 531 A HOH 18 3 HOH HOH 532 A HOH 50 3 HOH HOH 533 A HOH 17 3 HOH HOH 534 A HOH 2 3 HOH HOH 535 A HOH 54 3 HOH HOH 536 A HOH 3 3 HOH HOH 537 A HOH 59 3 HOH HOH 538 A HOH 5 3 HOH HOH 539 A HOH 9 3 HOH HOH 540 A HOH 10 3 HOH HOH 541 A HOH 70 3 HOH HOH 542 A HOH 56 3 HOH HOH 543 A HOH 98 3 HOH HOH 544 A HOH 103 3 HOH HOH 545 A HOH 12 3 HOH HOH 546 A HOH 75 3 HOH HOH 547 A HOH 6 3 HOH HOH 548 A HOH 48 3 HOH HOH 549 A HOH 52 3 HOH HOH 550 A HOH 41 3 HOH HOH 551 A HOH 4 3 HOH HOH 552 A HOH 14 3 HOH HOH 553 A HOH 40 3 HOH HOH 554 A HOH 44 3 HOH HOH 555 A HOH 127 3 HOH HOH 556 A HOH 37 3 HOH HOH 557 A HOH 15 3 HOH HOH 558 A HOH 66 3 HOH HOH 559 A HOH 35 3 HOH HOH 560 A HOH 140 3 HOH HOH 561 A HOH 47 3 HOH HOH 562 A HOH 91 3 HOH HOH 563 A HOH 29 3 HOH HOH 564 A HOH 11 3 HOH HOH 565 A HOH 7 3 HOH HOH 566 A HOH 42 3 HOH HOH 567 A HOH 43 3 HOH HOH 568 A HOH 115 3 HOH HOH 569 A HOH 28 3 HOH HOH 570 A HOH 144 3 HOH HOH 571 A HOH 83 3 HOH HOH 572 A HOH 121 3 HOH HOH 573 A HOH 33 3 HOH HOH 574 A HOH 101 3 HOH HOH 575 A HOH 49 3 HOH HOH 576 A HOH 64 3 HOH HOH 577 A HOH 34 3 HOH HOH 578 A HOH 24 3 HOH HOH 579 A HOH 31 3 HOH HOH 580 A HOH 38 3 HOH HOH 581 A HOH 72 3 HOH HOH 582 A HOH 92 3 HOH HOH 583 A HOH 108 3 HOH HOH 584 A HOH 23 3 HOH HOH 585 A HOH 109 3 HOH HOH 586 A HOH 68 3 HOH HOH 587 A HOH 36 3 HOH HOH 588 A HOH 156 3 HOH HOH 589 A HOH 89 3 HOH HOH 590 A HOH 102 3 HOH HOH 591 A HOH 99 3 HOH HOH 592 A HOH 39 3 HOH HOH 593 A HOH 80 3 HOH HOH 594 A HOH 94 3 HOH HOH 595 A HOH 32 3 HOH HOH 596 A HOH 60 3 HOH HOH 597 A HOH 116 3 HOH HOH 598 A HOH 148 3 HOH HOH 599 A HOH 113 3 HOH HOH 600 A HOH 117 3 HOH HOH 601 A HOH 85 3 HOH HOH 602 A HOH 27 3 HOH HOH 603 A HOH 1 3 HOH HOH 604 A HOH 51 3 HOH HOH 605 A HOH 111 3 HOH HOH 606 A HOH 87 3 HOH HOH 607 A HOH 153 3 HOH HOH 608 A HOH 67 3 HOH HOH 609 A HOH 114 3 HOH HOH 610 A HOH 79 3 HOH HOH 611 A HOH 151 3 HOH HOH 612 A HOH 78 3 HOH HOH 613 A HOH 146 3 HOH HOH 614 A HOH 74 3 HOH HOH 615 A HOH 147 3 HOH HOH 616 A HOH 73 3 HOH HOH 617 A HOH 100 3 HOH HOH 618 A HOH 46 3 HOH HOH 619 A HOH 150 3 HOH HOH 620 A HOH 77 3 HOH HOH 621 A HOH 126 3 HOH HOH 622 A HOH 125 3 HOH HOH 623 A HOH 155 3 HOH HOH 624 A HOH 96 3 HOH HOH 625 A HOH 84 3 HOH HOH 626 A HOH 130 3 HOH HOH 627 A HOH 53 3 HOH HOH 628 A HOH 58 3 HOH HOH 629 A HOH 131 3 HOH HOH 630 A HOH 95 3 HOH HOH 631 A HOH 122 3 HOH HOH 632 A HOH 86 3 HOH HOH 633 A HOH 82 3 HOH HOH 634 A HOH 154 3 HOH HOH 635 A HOH 90 3 HOH HOH 636 A HOH 138 3 HOH HOH 637 A HOH 139 3 HOH HOH 638 A HOH 104 3 HOH HOH 639 A HOH 118 3 HOH HOH 640 A HOH 81 3 HOH HOH 641 A HOH 149 3 HOH HOH 642 A HOH 132 3 HOH HOH 643 A HOH 124 3 HOH HOH 644 A HOH 45 3 HOH HOH 101 B HOH 142 3 HOH HOH 102 B HOH 8 3 HOH HOH 103 B HOH 133 3 HOH HOH 104 B n 1 297 A n 2 298 A PRO 299 n 3 PRO 299 A GLU 300 n 4 GLU 300 A PHE 301 n 5 PHE 301 A LEU 302 n 6 LEU 302 A GLY 303 n 7 GLY 303 A GLU 304 n 8 GLU 304 A GLU 305 n 9 GLU 305 A ASP 306 n 10 ASP 306 A ILE 307 n 11 ILE 307 A PRO 308 n 12 PRO 308 A ARG 309 n 13 ARG 309 A GLU 310 n 14 GLU 310 A PRO 311 n 15 PRO 311 A ARG 312 n 16 ARG 312 A ARG 313 n 17 ARG 313 A ILE 314 n 18 ILE 314 A VAL 315 n 19 VAL 315 A ILE 316 n 20 ILE 316 A HIS 317 n 21 HIS 317 A ARG 318 n 22 ARG 318 A GLY 319 n 23 GLY 319 A SER 320 n 24 SER 320 A THR 321 n 25 THR 321 A GLY 322 n 26 GLY 322 A LEU 323 n 27 LEU 323 A GLY 324 n 28 GLY 324 A PHE 325 n 29 PHE 325 A ASN 326 n 30 ASN 326 A ILE 327 n 31 ILE 327 A VAL 328 n 32 VAL 328 A GLY 329 n 33 GLY 329 A GLY 330 n 34 GLY 330 A GLU 331 n 35 GLU 331 A ASP 332 n 36 ASP 332 A GLY 333 n 37 GLY 333 A GLU 334 n 38 GLU 334 A GLY 335 n 39 GLY 335 A ILE 336 n 40 ILE 336 A PHE 337 n 41 PHE 337 A ILE 338 n 42 ILE 338 A SER 339 n 43 SER 339 A PHE 340 n 44 PHE 340 A ILE 341 n 45 ILE 341 A LEU 342 n 46 LEU 342 A ALA 343 n 47 ALA 343 A GLY 344 n 48 GLY 344 A GLY 345 n 49 GLY 345 A PRO 346 n 50 PRO 346 A ALA 347 n 51 ALA 347 A ASP 348 n 52 ASP 348 A LEU 349 n 53 LEU 349 A SER 350 n 54 SER 350 A GLY 351 n 55 GLY 351 A GLU 352 n 56 GLU 352 A LEU 353 n 57 LEU 353 A ARG 354 n 58 ARG 354 A LYS 355 n 59 LYS 355 A GLY 356 n 60 GLY 356 A ASP 357 n 61 ASP 357 A GLN 358 n 62 GLN 358 A ILE 359 n 63 ILE 359 A LEU 360 n 64 LEU 360 A SER 361 n 65 SER 361 A VAL 362 n 66 VAL 362 A ASN 363 n 67 ASN 363 A GLY 364 n 68 GLY 364 A VAL 365 n 69 VAL 365 A ASP 366 n 70 ASP 366 A LEU 367 n 71 LEU 367 A ARG 368 n 72 ARG 368 A ASN 369 n 73 ASN 369 A ALA 370 n 74 ALA 370 A SER 371 n 75 SER 371 A ALA 372 n 76 ALA 372 A GLU 373 n 77 GLU 373 A GLN 374 n 78 GLN 374 A ALA 375 n 79 ALA 375 A ALA 376 n 80 ALA 376 A ILE 377 n 81 ILE 377 A ALA 378 n 82 ALA 378 A LEU 379 n 83 LEU 379 A LYS 380 n 84 LYS 380 A ASN 381 n 85 ASN 381 A ALA 382 n 86 ALA 382 A GLY 383 n 87 GLY 383 A GLN 384 n 88 GLN 384 A THR 385 n 89 THR 385 A VAL 386 n 90 VAL 386 A THR 387 n 91 THR 387 A ILE 388 n 92 ILE 388 A ILE 389 n 93 ILE 389 A ALA 390 n 94 ALA 390 A GLN 391 n 95 GLN 391 A TYR 392 n 96 TYR 392 A LYS 393 n 97 LYS 393 A PRO 394 n 98 PRO 394 A GLU 395 n 99 GLU 395 A GLU 396 n 100 GLU 396 A TYR 397 n 101 TYR 397 A SER 398 n 102 SER 398 A ARG 399 n 103 ARG 399 A PHE 400 n 104 PHE 400 A GLU 401 n 105 GLU 401 A ALA 402 n 106 ALA 402 A ASN 403 n 107 ASN 403 A SER 404 n 108 SER 404 A ARG 405 n 109 ARG 405 A VAL 406 n 110 VAL 406 A ASP 407 n 111 ASP 407 A SER 408 n 112 SER 408 A SER 409 n 113 SER 409 A GLY 410 n 114 GLY 410 A ARG 411 n 115 ARG 411 A ILE 412 n 116 ILE 412 A VAL 413 n 117 VAL 413 A THR 414 n 118 THR 414 A ASP 415 n 119 ASP 415 A n 1 1 B n 2 2 B n 3 3 B TYR 4 n 4 TYR 4 B LYS 5 n 5 LYS 5 B GLN 6 n 6 GLN 6 B THR 7 n 7 THR 7 B SER 8 n 8 SER 8 B VAL 9 n 9 VAL 9 B 2.0163 0.7956 -0.4293 1.9295 0.6650 2.0243 0.0546 -0.1137 0.0996 0.1458 -0.0554 -0.4865 -0.2030 0.3470 0.0305 0.1460 -0.0224 -0.0157 0.1620 0.0348 0.1881 refined 46.4960 65.8960 41.9586 X-RAY DIFFRACTION 3.3344 -1.8774 -0.3836 2.6993 -1.3475 3.5926 -0.0854 0.2798 -0.1210 -0.1947 0.0788 0.1252 0.3329 -0.4009 0.0336 0.1070 -0.0509 -0.0300 0.1445 0.0134 0.0692 refined 37.9785 58.3849 27.0758 X-RAY DIFFRACTION 1.7427 -0.0687 -1.0042 1.5310 -0.8140 1.7183 0.0201 0.2676 0.1265 -0.0728 0.1147 0.0776 -0.0681 -0.2991 -0.0705 0.0810 -0.0054 -0.0151 0.1198 0.0295 0.0757 refined 37.0338 61.8970 30.6361 X-RAY DIFFRACTION 2.1115 -1.3477 -0.1746 2.6284 -0.2041 2.6713 -0.1158 0.0145 0.0088 0.1145 0.1793 -0.1086 0.1357 0.0385 -0.0198 0.0866 -0.0135 -0.0020 0.0679 0.0061 0.0788 refined 45.1624 55.0137 35.9402 X-RAY DIFFRACTION 4.9680 -4.9661 0.7368 5.0098 -0.4305 2.1806 -0.0759 0.3272 -0.6698 -0.1651 -0.1514 1.0764 0.8338 0.0632 0.2020 0.3725 -0.0175 0.0307 0.2790 -0.0237 0.3723 refined 39.1189 55.0391 22.5668 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 (chain A and resid 299:319) X-RAY DIFFRACTION 2 (chain A and resid 320:339) X-RAY DIFFRACTION 3 (chain A and resid 340:381) X-RAY DIFFRACTION 4 (chain A and resid 382:415) X-RAY DIFFRACTION 5 (chain B and resid 4:9) author_and_software_defined_assembly PISA 2 dimeric 830 -3 6790 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 314 A N ILE 18 A O ILE 388 A O ILE 92 A O GLN 391 A O GLN 95 A N GLN 358 A N GLN 62 A N VAL 362 A N VAL 66 A O VAL 365 A O VAL 69 A O PHE 337 A O PHE 41 A N VAL 328 A N VAL 32 A N ILE 327 A N ILE 31 B O THR 7 B O THR 7 A N ARG 405 A N ARG 109 A O VAL 413 A O VAL 117 1 A HOH 610 C HOH 1 A HOH 637 C HOH 1 B HOH 104 D HOH 1 A CG ASP 332 A CG ASP 36 1 Y 1 A OD1 ASP 332 A OD1 ASP 36 1 Y 1 A OD2 ASP 332 A OD2 ASP 36 1 Y 1 A CD ARG 399 A CD ARG 103 1 Y 1 A NE ARG 399 A NE ARG 103 1 Y 1 A CZ ARG 399 A CZ ARG 103 1 Y 1 A NH1 ARG 399 A NH1 ARG 103 1 Y 1 A NH2 ARG 399 A NH2 ARG 103 1 Y 1 B CG LYS 5 B CG LYS 5 1 Y 1 B CD LYS 5 B CD LYS 5 1 Y 1 B CE LYS 5 B CE LYS 5 1 Y 1 B NZ LYS 5 B NZ LYS 5 1 Y 1 A GLY 297 A GLY 1 1 Y 1 A SER 298 A SER 2 1 Y 1 B THR 1 B THR 1 1 Y 1 B LYS 2 B LYS 2 1 Y 1 B ASN 3 B ASN 3 1 Y 1 A B OD1 HG ASN SER 326 8 1.60 B 1 A A O O HOH HOH 551 603 2.15 0.2033 0.1751 0.1780 1.616 40.067 1513 15110 10.01 92.53 0.14 random selection 1 FREE R-VALUE 1.46 MOLECULAR REPLACEMENT 19.50 0.90 1.11 1BE9 ML FLAT BULK SOLVENT MODEL 1.616 40.067 148 1070 0 0 922 0.006 1082 0.945 1487 23.284 410 0.048 166 0.004 209 0.3207 0.3110 1.6681 45 409 31.00 0.2396 0.2394 1.7277 124 1116 86.00 0.2400 0.1915 1.7969 141 1266 99.00 0.2025 0.1731 1.8786 146 1315 100.00 0.2213 0.1992 1.9777 146 1318 100.00 0.2149 0.1843 2.1016 147 1311 100.00 0.2192 0.1699 2.2638 147 1326 100.00 0.1769 0.1637 2.4916 149 1342 100.00 0.2025 0.1623 2.8521 149 1337 100.00 0.2230 0.1611 3.5930 153 1378 100.00 0.1743 0.1744 40.0791 166 1479 100.00 1.616 40.067 5HFB 15110 0.035 1 65.515 13.3 92.53 0.338 0.936 1 1.6 refinement PHENIX 1.10pre_2104 data reduction HKL-2000 data scaling HKL-2000 phasing PHENIX model building Coot The third PDZ domain from the synaptic protein PSD-95 (H372A mutant) in complex with a C-terminal peptide derived from CRIPT 1 N N 2 N N 3 N N 3 N N A PHE 301 A PHE 5 HELX_P A GLU 305 A GLU 9 5 AA1 5 A GLU 331 A GLU 35 HELX_P A GLU 334 A GLU 38 5 AA2 4 A GLY 345 A GLY 49 HELX_P A GLY 351 A GLY 55 1 AA3 7 A SER 371 A SER 75 HELX_P A ASN 381 A ASN 85 1 AA4 11 A LYS 393 A LYS 97 HELX_P A ARG 399 A ARG 103 1 AA5 7 PEPTIDE BINDING PROTEIN PDZ, GLGF, DHR, adhesion, synapse, synaptic density, peptide-binding domain, PEPTIDE BINDING PROTEIN DLG4_RAT UNP 1 302 P31016 LGEEDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN AGQTVTIIAQYKPEEYSRFEA CRIPT_RAT UNP 2 93 Q792Q4 TKNYKQTSV 302 402 5HFB 302 402 P31016 A 1 6 106 93 101 5HFB 1 9 Q792Q4 B 2 1 9 1 expression tag GLY 297 5HFB A P31016 UNP 1 1 expression tag SER 298 5HFB A P31016 UNP 2 1 expression tag PRO 299 5HFB A P31016 UNP 3 1 expression tag GLU 300 5HFB A P31016 UNP 4 1 expression tag PHE 301 5HFB A P31016 UNP 5 1 HIS engineered mutation ALA 372 5HFB A P31016 UNP 372 76 1 expression tag ASN 403 5HFB A P31016 UNP 107 1 expression tag SER 404 5HFB A P31016 UNP 108 1 expression tag ARG 405 5HFB A P31016 UNP 109 1 expression tag VAL 406 5HFB A P31016 UNP 110 1 expression tag ASP 407 5HFB A P31016 UNP 111 1 expression tag SER 408 5HFB A P31016 UNP 112 1 expression tag SER 409 5HFB A P31016 UNP 113 1 expression tag GLY 410 5HFB A P31016 UNP 114 1 expression tag ARG 411 5HFB A P31016 UNP 115 1 expression tag ILE 412 5HFB A P31016 UNP 116 1 expression tag VAL 413 5HFB A P31016 UNP 117 1 expression tag THR 414 5HFB A P31016 UNP 118 1 expression tag ASP 415 5HFB A P31016 UNP 119 4 3 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 312 A ARG 16 A HIS 317 A HIS 21 A THR 385 A THR 89 A TYR 392 A TYR 96 A ASP 357 A ASP 61 A VAL 362 A VAL 66 A VAL 365 A VAL 69 A ASP 366 A ASP 70 A ILE 336 A ILE 40 A ILE 341 A ILE 45 A PHE 325 A PHE 29 A GLY 329 A GLY 33 B GLN 6 B GLN 6 B SER 8 B SER 8 A SER 404 A SER 108 A VAL 406 A VAL 110 A ILE 412 A ILE 116 A THR 414 A THR 118 213 P 41 3 2