0.010276
0.005933
0.000000
0.000000
0.011866
0.000000
0.000000
0.000000
0.010244
0.00000
0.00000
0.00000
Kreutzer, A.G.
Nowick, J.S.
Spencer, R.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
72
90.00
90.00
120.00
97.310
97.310
97.621
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H12 N2 O2
132.161
n
L-ornithine
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C9 H10 I N O2
291.086
n
IODO-PHENYLALANINE
L-peptide linking
C3 H7 N O2
89.093
n
SARCOSINE
peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Am.Chem.Soc.
JACSAT
1520-5126
138
4634
4642
10.1021/jacs.6b01332
26967810
X-ray Crystallographic Structures of a Trimer, Dodecamer, and Annular Pore Formed by an A beta 17-36 beta-Hairpin.
2016
133
1
CCD
2015-07-15
RIGAKU SATURN 92
Cu
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU MICROMAX-007 HF
2368.577
Amyloid beta A4 protein
UNP residues 687-707
F19PHI, V24C, G29C, G33Sar, M35Orn
6
syn
polymer
18.015
water
37
nat
water
ABPP,APPI,APP,Alzheimer disease amyloid protein,Cerebral vascular amyloid peptide,CVAP,PreA4,Protease nexin-II,PN-II
no
yes
(ORN)LV(PHI)FAEDCGSNKCAII(SAR)L(ORN)V
ALVFFAEDCGSNKCAIIGLAV
A,B,C,D,E,F
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
4.71
73.9
VAPOR DIFFUSION, HANGING DROP
6.4
0.1 M HEPES Buffer, 31% (v/v) Jeffamine M-600
6.5-7.5
296
Room temperature
pdbx_audit_support
pdbx_struct_oper_list
pdbx_audit_support
repository
Initial release
Database references
Author supporting evidence
Derived calculations
Author supporting evidence
1
0
2016-03-23
1
1
2016-04-20
1
2
2017-09-13
1
3
2019-12-25
_pdbx_audit_support.funding_organization
_pdbx_struct_oper_list.symmetry_operation
_pdbx_audit_support.funding_organization
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM097562
N
RCSB
Y
RCSB
2016-01-19
REL
REL
1
A
O
HOH
105
6.13
HOH
water
9606
Human
Homo sapiens
sample
1
21
HOH
31
2
HOH
HOH
101
A
HOH
6
2
HOH
HOH
102
A
HOH
24
2
HOH
HOH
103
A
HOH
16
2
HOH
HOH
104
A
HOH
21
2
HOH
HOH
105
A
HOH
32
2
HOH
HOH
101
B
HOH
13
2
HOH
HOH
102
B
HOH
17
2
HOH
HOH
103
B
HOH
41
2
HOH
HOH
104
B
HOH
10
2
HOH
HOH
105
B
HOH
23
2
HOH
HOH
101
C
HOH
34
2
HOH
HOH
102
C
HOH
7
2
HOH
HOH
103
C
HOH
18
2
HOH
HOH
104
C
HOH
38
2
HOH
HOH
105
C
HOH
15
2
HOH
HOH
106
C
HOH
27
2
HOH
HOH
107
C
HOH
35
2
HOH
HOH
101
D
HOH
8
2
HOH
HOH
102
D
HOH
4
2
HOH
HOH
103
D
HOH
19
2
HOH
HOH
104
D
HOH
40
2
HOH
HOH
105
D
HOH
36
2
HOH
HOH
106
D
HOH
30
2
HOH
HOH
101
E
HOH
14
2
HOH
HOH
102
E
HOH
2
2
HOH
HOH
103
E
HOH
39
2
HOH
HOH
104
E
HOH
25
2
HOH
HOH
105
E
HOH
12
2
HOH
HOH
101
F
HOH
33
2
HOH
HOH
102
F
HOH
28
2
HOH
HOH
103
F
HOH
29
2
HOH
HOH
104
F
HOH
20
2
HOH
HOH
105
F
HOH
5
2
HOH
HOH
106
F
HOH
11
2
HOH
HOH
107
F
HOH
26
2
HOH
HOH
108
F
HOH
9
2
HOH
HOH
109
F
ORN
1
n
1
ORN
1
A
LEU
2
n
2
LEU
2
A
VAL
3
n
3
VAL
3
A
PHI
4
n
4
PHI
4
A
PHE
5
n
5
PHE
5
A
ALA
6
n
6
ALA
6
A
GLU
7
n
7
GLU
7
A
ASP
8
n
8
ASP
8
A
CYS
9
n
9
CYS
9
A
GLY
10
n
10
GLY
10
A
SER
11
n
11
SER
11
A
ASN
12
n
12
ASN
12
A
LYS
13
n
13
LYS
13
A
CYS
14
n
14
CYS
14
A
ALA
15
n
15
ALA
15
A
ILE
16
n
16
ILE
16
A
ILE
17
n
17
ILE
17
A
SAR
18
n
18
SAR
18
A
LEU
19
n
19
LEU
19
A
ORN
20
n
20
ORN
20
A
VAL
21
n
21
VAL
21
A
ORN
1
n
1
ORN
1
B
LEU
2
n
2
LEU
2
B
VAL
3
n
3
VAL
3
B
PHI
4
n
4
PHI
4
B
PHE
5
n
5
PHE
5
B
ALA
6
n
6
ALA
6
B
GLU
7
n
7
GLU
7
B
ASP
8
n
8
ASP
8
B
CYS
9
n
9
CYS
9
B
GLY
10
n
10
GLY
10
B
SER
11
n
11
SER
11
B
ASN
12
n
12
ASN
12
B
LYS
13
n
13
LYS
13
B
CYS
14
n
14
CYS
14
B
ALA
15
n
15
ALA
15
B
ILE
16
n
16
ILE
16
B
ILE
17
n
17
ILE
17
B
SAR
18
n
18
SAR
18
B
LEU
19
n
19
LEU
19
B
ORN
20
n
20
ORN
20
B
VAL
21
n
21
VAL
21
B
ORN
1
n
1
ORN
1
C
LEU
2
n
2
LEU
2
C
VAL
3
n
3
VAL
3
C
PHI
4
n
4
PHI
4
C
PHE
5
n
5
PHE
5
C
ALA
6
n
6
ALA
6
C
GLU
7
n
7
GLU
7
C
ASP
8
n
8
ASP
8
C
CYS
9
n
9
CYS
9
C
GLY
10
n
10
GLY
10
C
SER
11
n
11
SER
11
C
ASN
12
n
12
ASN
12
C
LYS
13
n
13
LYS
13
C
CYS
14
n
14
CYS
14
C
ALA
15
n
15
ALA
15
C
ILE
16
n
16
ILE
16
C
ILE
17
n
17
ILE
17
C
SAR
18
n
18
SAR
18
C
LEU
19
n
19
LEU
19
C
ORN
20
n
20
ORN
20
C
VAL
21
n
21
VAL
21
C
ORN
1
n
1
ORN
1
D
LEU
2
n
2
LEU
2
D
VAL
3
n
3
VAL
3
D
PHI
4
n
4
PHI
4
D
PHE
5
n
5
PHE
5
D
ALA
6
n
6
ALA
6
D
GLU
7
n
7
GLU
7
D
ASP
8
n
8
ASP
8
D
CYS
9
n
9
CYS
9
D
GLY
10
n
10
GLY
10
D
SER
11
n
11
SER
11
D
ASN
12
n
12
ASN
12
D
LYS
13
n
13
LYS
13
D
CYS
14
n
14
CYS
14
D
ALA
15
n
15
ALA
15
D
ILE
16
n
16
ILE
16
D
ILE
17
n
17
ILE
17
D
SAR
18
n
18
SAR
18
D
LEU
19
n
19
LEU
19
D
ORN
20
n
20
ORN
20
D
VAL
21
n
21
VAL
21
D
ORN
1
n
1
ORN
1
E
LEU
2
n
2
LEU
2
E
VAL
3
n
3
VAL
3
E
PHI
4
n
4
PHI
4
E
PHE
5
n
5
PHE
5
E
ALA
6
n
6
ALA
6
E
GLU
7
n
7
GLU
7
E
ASP
8
n
8
ASP
8
E
CYS
9
n
9
CYS
9
E
GLY
10
n
10
GLY
10
E
SER
11
n
11
SER
11
E
ASN
12
n
12
ASN
12
E
LYS
13
n
13
LYS
13
E
CYS
14
n
14
CYS
14
E
ALA
15
n
15
ALA
15
E
ILE
16
n
16
ILE
16
E
ILE
17
n
17
ILE
17
E
SAR
18
n
18
SAR
18
E
LEU
19
n
19
LEU
19
E
ORN
20
n
20
ORN
20
E
VAL
21
n
21
VAL
21
E
ORN
1
n
1
ORN
1
F
LEU
2
n
2
LEU
2
F
VAL
3
n
3
VAL
3
F
PHI
4
n
4
PHI
4
F
PHE
5
n
5
PHE
5
F
ALA
6
n
6
ALA
6
F
GLU
7
n
7
GLU
7
F
ASP
8
n
8
ASP
8
F
CYS
9
n
9
CYS
9
F
GLY
10
n
10
GLY
10
F
SER
11
n
11
SER
11
F
ASN
12
n
12
ASN
12
F
LYS
13
n
13
LYS
13
F
CYS
14
n
14
CYS
14
F
ALA
15
n
15
ALA
15
F
ILE
16
n
16
ILE
16
F
ILE
17
n
17
ILE
17
F
SAR
18
n
18
SAR
18
F
LEU
19
n
19
LEU
19
F
ORN
20
n
20
ORN
20
F
VAL
21
n
21
VAL
21
F
4.7810
2.0818
4.3050
3.7417
5.0896
8.1116
-0.5936
-0.5723
0.5292
-0.6310
0.2823
0.2275
-1.0806
-0.0597
0.3971
0.4320
-0.0687
0.0403
0.7644
-0.0410
0.5595
refined
22.2884
20.7387
63.1979
X-RAY DIFFRACTION
4.5978
2.0637
-0.7757
4.0808
-4.5089
5.6227
0.1614
-0.5592
-1.5390
-1.4863
-1.0612
2.7846
-0.7273
-1.4563
1.2449
1.1852
-0.2681
-0.3005
1.8176
0.0163
1.1965
refined
10.8632
11.1192
55.9003
X-RAY DIFFRACTION
3.0223
3.0689
1.1409
8.1610
4.9548
3.2580
-0.5022
-1.5709
-1.4883
-0.7125
0.1538
0.1948
0.0961
-1.1897
0.3084
0.4765
0.0367
0.0594
0.8270
0.0717
0.6799
refined
22.4804
18.7345
66.4217
X-RAY DIFFRACTION
4.2713
3.4987
2.5044
3.6800
1.5281
8.4540
0.5274
0.6671
-0.7372
-0.4346
-0.6808
0.1536
0.2439
-0.3316
0.3375
0.4093
0.1076
0.0919
0.7171
0.0685
0.6327
refined
21.7910
25.3370
56.2899
X-RAY DIFFRACTION
6.2479
-7.3560
-2.6248
9.3384
1.1555
6.5658
-0.6786
-0.5490
3.4669
-1.1130
0.0748
-3.0250
-2.6673
0.1438
1.3166
1.1488
0.2038
-0.0898
0.8885
0.2456
1.2759
refined
22.7845
41.4392
52.2239
X-RAY DIFFRACTION
3.1687
-1.9670
1.7835
2.3346
0.2435
2.3758
0.6171
0.5602
-0.1104
-0.3651
-0.9215
0.1302
-0.1003
-0.0050
0.1801
0.5256
0.1475
0.0265
0.7171
-0.0197
0.6084
refined
20.1507
23.9445
53.2207
X-RAY DIFFRACTION
3.3734
-2.1213
-0.5355
6.5019
-3.6643
3.7560
1.4579
0.7702
-0.4869
-0.5829
-1.3650
-0.3757
1.3397
-1.6702
0.2825
0.6335
0.0673
-0.0656
0.7274
-0.0633
0.4114
refined
40.2068
19.2624
70.0930
X-RAY DIFFRACTION
2.0935
1.9336
-1.8417
1.7546
-1.6497
1.5772
-0.3469
-5.4507
0.7570
1.7661
2.9235
-0.7032
-1.2283
-0.8606
3.2601
1.3274
0.6439
0.6882
1.7092
0.0798
1.2627
refined
33.2105
29.5624
80.5247
X-RAY DIFFRACTION
2.8224
2.8128
3.6476
7.5978
8.0918
9.5176
0.2031
-1.0154
0.6746
2.4707
0.8506
-0.3651
2.4414
0.0442
-1.1604
0.6238
-0.0330
0.0605
0.6616
-0.1075
0.5409
refined
38.3081
21.1178
75.5853
X-RAY DIFFRACTION
4.6327
-0.5463
3.1268
3.7256
-2.2267
3.0875
-1.0737
0.9679
0.4457
1.7195
-0.0730
-1.8390
2.4001
-0.4488
-0.7420
0.7686
-0.0754
-0.1512
0.5374
-0.0723
0.5376
refined
39.1701
9.7562
65.6896
X-RAY DIFFRACTION
4.4912
0.1634
0.4900
4.4453
5.1379
5.9724
0.8741
1.0454
-0.4111
0.7537
-1.6562
-0.6001
1.5106
1.7420
0.3867
0.6867
0.0621
-0.1688
0.5415
-0.0290
0.6657
refined
46.7644
11.7359
66.5719
X-RAY DIFFRACTION
7.4788
5.5691
-2.5221
4.6317
-2.8950
4.1571
-0.0721
0.3666
0.1207
-0.0300
-0.3137
-1.1264
0.4073
0.6564
0.3329
0.5510
-0.0084
-0.0563
0.6139
0.0377
0.5267
refined
49.2596
16.6871
62.3261
X-RAY DIFFRACTION
9.3543
-2.0994
-1.1320
4.6889
-1.8021
7.9051
0.1400
-0.1985
0.3371
-0.0731
0.7684
-0.3502
0.7440
-0.4856
-0.9420
0.5907
0.2248
0.0169
0.6478
-0.0874
0.5424
refined
25.7859
27.6664
69.2083
X-RAY DIFFRACTION
4.3669
-0.8835
-0.4148
8.1475
-4.4579
3.7292
-0.4961
-0.0172
0.0571
-0.1203
0.1142
-0.8858
0.0884
-0.3534
0.1611
0.5891
0.0274
0.0242
0.5046
-0.0444
0.5040
refined
27.1139
31.8370
63.0438
X-RAY DIFFRACTION
8.0323
-0.5842
-7.8828
7.4467
-0.1884
8.7510
0.1060
0.8880
0.6479
0.3712
0.0152
-0.2520
-0.1948
0.0325
0.3434
0.4411
-0.1466
-0.1042
0.7897
-0.1215
0.5163
refined
44.4048
25.2833
66.2753
X-RAY DIFFRACTION
5.4819
0.2960
4.9092
1.2788
0.6515
8.2108
-3.7931
-0.0879
1.4279
-1.5518
4.1010
-1.9966
0.1141
-0.3549
-0.4771
1.4879
-0.1506
0.5690
1.4369
-0.5686
1.8945
refined
58.5316
29.1869
58.8153
X-RAY DIFFRACTION
2.3400
1.6762
0.1947
3.3557
-2.9677
4.3440
-0.1618
-0.0404
1.5613
-0.2400
-0.1371
0.5272
-0.4746
-0.1611
0.5178
0.5450
0.0017
-0.0372
0.4460
-0.0703
0.6787
refined
43.3041
28.7604
66.9214
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 1 through 6 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 7 through 11 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 12 through 21 )
X-RAY DIFFRACTION
4
chain 'B' and (resid 1 through 6 )
X-RAY DIFFRACTION
5
chain 'B' and (resid 7 through 11 )
X-RAY DIFFRACTION
6
chain 'B' and (resid 12 through 21 )
X-RAY DIFFRACTION
7
chain 'C' and (resid 1 through 6 )
X-RAY DIFFRACTION
8
chain 'C' and (resid 7 through 11 )
X-RAY DIFFRACTION
9
chain 'C' and (resid 12 through 17 )
X-RAY DIFFRACTION
10
chain 'C' and (resid 19 through 21 )
X-RAY DIFFRACTION
11
chain 'D' and (resid 1 through 11 )
X-RAY DIFFRACTION
12
chain 'D' and (resid 12 through 21 )
X-RAY DIFFRACTION
13
chain 'E' and (resid 1 through 11 )
X-RAY DIFFRACTION
14
chain 'E' and (resid 12 through 21 )
X-RAY DIFFRACTION
15
chain 'F' and (resid 1 through 6 )
X-RAY DIFFRACTION
16
chain 'F' and (resid 7 through 11 )
X-RAY DIFFRACTION
17
chain 'F' and (resid 12 through 21 )
author_and_software_defined_assembly
PISA
12
dodecameric
author_and_software_defined_assembly
PISA
3
trimeric
author_and_software_defined_assembly
PISA
6
hexameric
author_and_software_defined_assembly
PISA
3
trimeric
author_and_software_defined_assembly
PISA
6
hexameric
11330
-79
13490
1500
-11
4730
3930
-28
8540
1490
-11
4690
4690
-37
7670
A
ORN
1
modified residue
A
ORN
1
LYS
A
PHI
4
modified residue
A
PHI
4
PHE
A
SAR
18
modified residue
A
SAR
18
GLY
A
ORN
20
modified residue
A
ORN
20
MET
B
ORN
1
modified residue
B
ORN
1
LYS
B
PHI
4
modified residue
B
PHI
4
PHE
B
SAR
18
modified residue
B
SAR
18
GLY
B
ORN
20
modified residue
B
ORN
20
MET
C
ORN
1
modified residue
C
ORN
1
LYS
C
PHI
4
modified residue
C
PHI
4
PHE
C
SAR
18
modified residue
C
SAR
18
GLY
C
ORN
20
modified residue
C
ORN
20
MET
D
ORN
1
modified residue
D
ORN
1
LYS
D
PHI
4
modified residue
D
PHI
4
PHE
D
SAR
18
modified residue
D
SAR
18
GLY
D
ORN
20
modified residue
D
ORN
20
MET
E
ORN
1
modified residue
E
ORN
1
LYS
E
PHI
4
modified residue
E
PHI
4
PHE
E
SAR
18
modified residue
E
SAR
18
GLY
E
ORN
20
modified residue
E
ORN
20
MET
F
ORN
1
modified residue
F
ORN
1
LYS
F
PHI
4
modified residue
F
PHI
4
PHE
F
SAR
18
modified residue
F
SAR
18
GLY
F
ORN
20
modified residue
F
ORN
20
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_556
y,x,-z+4/3
crystal symmetry operation
0.0000000000
0.0000000000
130.1613333333
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_656
-x+y+1,y,-z+3/2
crystal symmetry operation
97.3100000000
0.0000000000
146.4315000000
0.5000000000
0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_556
x,x-y,-z+7/6
crystal symmetry operation
0.0000000000
0.0000000000
113.8911666667
A
O
VAL
21
A
O
VAL
21
A
N
LEU
2
A
N
LEU
2
A
N
VAL
3
A
N
VAL
3
E
O
GLU
7
E
O
GLU
7
E
N
ASP
8
E
N
ASP
8
E
O
ALA
15
E
O
ALA
15
B
O
ILE
17
B
O
ILE
17
B
N
ALA
6
B
N
ALA
6
B
O
VAL
3
B
O
VAL
3
A
N
GLU
7
A
N
GLU
7
A
N
LEU
2
A
N
LEU
2
A
O
VAL
21
A
O
VAL
21
B
O
ILE
17
B
O
ILE
17
B
N
ALA
6
B
N
ALA
6
B
N
GLU
7
B
N
GLU
7
E
O
VAL
3
E
O
VAL
3
E
N
ASP
8
E
N
ASP
8
E
O
ALA
15
E
O
ALA
15
C
O
VAL
21
C
O
VAL
21
C
N
LEU
2
C
N
LEU
2
C
N
GLU
7
C
N
GLU
7
F
O
VAL
3
F
O
VAL
3
F
N
ALA
6
F
N
ALA
6
F
O
ILE
17
F
O
ILE
17
D
O
ILE
17
D
O
ILE
17
D
N
ALA
6
D
N
ALA
6
D
O
GLU
7
D
O
GLU
7
C
N
VAL
3
C
N
VAL
3
C
N
LEU
2
C
N
LEU
2
C
O
VAL
21
C
O
VAL
21
D
O
ILE
17
D
O
ILE
17
D
N
ALA
6
D
N
ALA
6
D
N
VAL
3
D
N
VAL
3
F
O
GLU
7
F
O
GLU
7
F
N
ALA
6
F
N
ALA
6
F
O
ILE
17
F
O
ILE
17
1
A
HOH
104
G
HOH
1
C
D
O
O
HOH
HOH
102
101
1.99
1
D
F
O
O
HOH
HOH
101
102
2.09
1
B
E
O
O
HOH
HOH
101
101
2.09
1
C
F
O
O
HOH
HOH
102
102
2.15
1
A
B
O
O
HOH
HOH
101
101
2.19
1
B
C
OD2
H3
ASP
ORN
8
1
1.58
1_555
12_556
1
A
LYS
13
-174.48
117.73
1
A
ALA
15
-170.28
135.58
1
B
SER
11
-48.40
-71.42
1
B
ASN
12
-147.74
29.56
1
C
LYS
13
-172.54
115.51
1
D
ALA
15
-175.99
136.57
1
E
ASN
12
-133.65
-38.23
1
F
ALA
15
-177.67
148.00
0.2622
0.2335
0.2365
2.295
28.091
1270
12695
9.86
99.92
0.41
Random selection
1
FREE R-VALUE
1.34
30.79
0.90
1.11
ML
FLAT BULK SOLVENT MODEL
2.295
28.091
37
973
0
0
936
0.005
954
0.934
1278
20.214
606
0.046
150
0.004
162
0.3906
0.3794
2.3449
144
1280
99.00
0.4212
0.3522
2.3994
138
1285
100.00
0.3653
0.3420
2.4594
147
1308
100.00
0.3604
0.3447
2.5258
146
1305
100.00
0.4008
0.3318
2.6001
144
1314
100.00
0.3858
0.3355
2.6840
141
1281
100.00
0.3397
0.2962
2.7798
139
1312
100.00
0.2993
0.2846
2.8910
137
1299
100.00
0.3425
0.2758
3.0224
143
1315
100.00
0.3260
0.2414
3.1816
144
1297
100.00
0.2747
0.2581
3.3806
144
1303
100.00
0.2318
0.2360
3.6411
140
1294
100.00
0.2278
0.2132
4.0066
144
1301
100.00
0.1959
0.1675
4.5842
141
1307
100.00
0.1974
0.1817
5.7674
140
1318
100.00
0.2352
0.2021
28.0930
145
1302
100.00
2.295
28.09
5HOW
12701
0.994
0.05629
1
15.73
2.0
100
0.4378
2.295
2.377
1.41
1
2.0
99
refinement
PHENIX
(1.10.1_2155: ???)
data reduction
XDS
data scaling
Aimless
0.5.17
phasing
PHASER
1.10.1_2155
Amyloid beta A4 protein
X-ray crystallographic structure of an Abeta 17-36 beta-hairpin. LV(PHI)FAEDCGSNKCAII(SAR)L(ORN)V
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
disulf
2.034
A
CYS
9
A
SG
CYS
9
1_555
A
CYS
14
A
SG
CYS
14
1_555
disulf
2.037
B
CYS
9
B
SG
CYS
9
1_555
B
CYS
14
B
SG
CYS
14
1_555
disulf
2.031
C
CYS
9
C
SG
CYS
9
1_555
C
CYS
14
C
SG
CYS
14
1_555
disulf
2.034
D
CYS
9
D
SG
CYS
9
1_555
D
CYS
14
D
SG
CYS
14
1_555
disulf
2.038
E
CYS
9
E
SG
CYS
9
1_555
E
CYS
14
E
SG
CYS
14
1_555
disulf
2.035
F
CYS
9
F
SG
CYS
9
1_555
F
CYS
14
F
SG
CYS
14
1_555
covale
1.378
both
A
ORN
1
A
NE
ORN
1
1_555
A
VAL
21
A
C
VAL
21
1_555
covale
1.372
both
A
ORN
1
A
C
ORN
1
1_555
A
LEU
2
A
N
LEU
2
1_555
covale
1.330
both
A
VAL
3
A
C
VAL
3
1_555
A
PHI
4
A
N
PHI
4
1_555
covale
1.327
both
A
PHI
4
A
C
PHI
4
1_555
A
PHE
5
A
N
PHE
5
1_555
covale
1.338
both
A
ILE
17
A
C
ILE
17
1_555
A
SAR
18
A
N
SAR
18
1_555
covale
1.331
both
A
SAR
18
A
C
SAR
18
1_555
A
LEU
19
A
N
LEU
19
1_555
covale
1.332
both
A
LEU
19
A
C
LEU
19
1_555
A
ORN
20
A
N
ORN
20
1_555
covale
1.331
both
A
ORN
20
A
C
ORN
20
1_555
A
VAL
21
A
N
VAL
21
1_555
covale
1.379
both
B
ORN
1
B
NE
ORN
1
1_555
B
VAL
21
B
C
VAL
21
1_555
covale
1.372
both
B
ORN
1
B
C
ORN
1
1_555
B
LEU
2
B
N
LEU
2
1_555
covale
1.324
both
B
VAL
3
B
C
VAL
3
1_555
B
PHI
4
B
N
PHI
4
1_555
covale
1.323
both
B
PHI
4
B
C
PHI
4
1_555
B
PHE
5
B
N
PHE
5
1_555
covale
1.338
both
B
ILE
17
B
C
ILE
17
1_555
B
SAR
18
B
N
SAR
18
1_555
covale
1.331
both
B
SAR
18
B
C
SAR
18
1_555
B
LEU
19
B
N
LEU
19
1_555
covale
1.331
both
B
LEU
19
B
C
LEU
19
1_555
B
ORN
20
B
N
ORN
20
1_555
covale
1.329
both
B
ORN
20
B
C
ORN
20
1_555
B
VAL
21
B
N
VAL
21
1_555
covale
1.378
both
C
ORN
1
C
NE
ORN
1
1_555
C
VAL
21
C
C
VAL
21
1_555
covale
1.371
both
C
ORN
1
C
C
ORN
1
1_555
C
LEU
2
C
N
LEU
2
1_555
covale
1.326
both
C
VAL
3
C
C
VAL
3
1_555
C
PHI
4
C
N
PHI
4
1_555
covale
1.324
both
C
PHI
4
C
C
PHI
4
1_555
C
PHE
5
C
N
PHE
5
1_555
covale
1.336
both
C
ILE
17
C
C
ILE
17
1_555
C
SAR
18
C
N
SAR
18
1_555
covale
1.332
both
C
SAR
18
C
C
SAR
18
1_555
C
LEU
19
C
N
LEU
19
1_555
covale
1.333
both
C
LEU
19
C
C
LEU
19
1_555
C
ORN
20
C
N
ORN
20
1_555
covale
1.330
both
C
ORN
20
C
C
ORN
20
1_555
C
VAL
21
C
N
VAL
21
1_555
covale
1.379
both
D
ORN
1
D
NE
ORN
1
1_555
D
VAL
21
D
C
VAL
21
1_555
covale
1.372
both
D
ORN
1
D
C
ORN
1
1_555
D
LEU
2
D
N
LEU
2
1_555
covale
1.328
both
D
VAL
3
D
C
VAL
3
1_555
D
PHI
4
D
N
PHI
4
1_555
covale
1.324
both
D
PHI
4
D
C
PHI
4
1_555
D
PHE
5
D
N
PHE
5
1_555
covale
1.335
both
D
ILE
17
D
C
ILE
17
1_555
D
SAR
18
D
N
SAR
18
1_555
covale
1.328
both
D
SAR
18
D
C
SAR
18
1_555
D
LEU
19
D
N
LEU
19
1_555
covale
1.333
both
D
LEU
19
D
C
LEU
19
1_555
D
ORN
20
D
N
ORN
20
1_555
covale
1.329
both
D
ORN
20
D
C
ORN
20
1_555
D
VAL
21
D
N
VAL
21
1_555
covale
1.380
both
E
ORN
1
E
NE
ORN
1
1_555
E
VAL
21
E
C
VAL
21
1_555
covale
1.371
both
E
ORN
1
E
C
ORN
1
1_555
E
LEU
2
E
N
LEU
2
1_555
covale
1.328
both
E
VAL
3
E
C
VAL
3
1_555
E
PHI
4
E
N
PHI
4
1_555
covale
1.326
both
E
PHI
4
E
C
PHI
4
1_555
E
PHE
5
E
N
PHE
5
1_555
covale
1.335
both
E
ILE
17
E
C
ILE
17
1_555
E
SAR
18
E
N
SAR
18
1_555
covale
1.330
both
E
SAR
18
E
C
SAR
18
1_555
E
LEU
19
E
N
LEU
19
1_555
covale
1.332
both
E
LEU
19
E
C
LEU
19
1_555
E
ORN
20
E
N
ORN
20
1_555
covale
1.332
both
E
ORN
20
E
C
ORN
20
1_555
E
VAL
21
E
N
VAL
21
1_555
covale
1.380
both
F
ORN
1
F
NE
ORN
1
1_555
F
VAL
21
F
C
VAL
21
1_555
covale
1.373
both
F
ORN
1
F
C
ORN
1
1_555
F
LEU
2
F
N
LEU
2
1_555
covale
1.325
both
F
VAL
3
F
C
VAL
3
1_555
F
PHI
4
F
N
PHI
4
1_555
covale
1.326
both
F
PHI
4
F
C
PHI
4
1_555
F
PHE
5
F
N
PHE
5
1_555
covale
1.335
both
F
ILE
17
F
C
ILE
17
1_555
F
SAR
18
F
N
SAR
18
1_555
covale
1.328
both
F
SAR
18
F
C
SAR
18
1_555
F
LEU
19
F
N
LEU
19
1_555
covale
1.332
both
F
LEU
19
F
C
LEU
19
1_555
F
ORN
20
F
N
ORN
20
1_555
covale
1.330
both
F
ORN
20
F
C
ORN
20
1_555
F
VAL
21
F
N
VAL
21
1_555
PROTEIN FIBRIL
amyloid, oligomer, beta-hairpin, Alzheimer's, PROTEIN FIBRIL
5HOW
PDB
1
1
5HOW
1
21
5HOW
1
21
5HOW
A
1
1
21
1
21
5HOW
1
21
5HOW
B
1
1
21
1
21
5HOW
1
21
5HOW
C
1
1
21
1
21
5HOW
1
21
5HOW
D
1
1
21
1
21
5HOW
1
21
5HOW
E
1
1
21
1
21
5HOW
1
21
5HOW
F
1
1
21
4
4
4
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
16
A
ILE
16
A
VAL
21
A
VAL
21
A
LEU
2
A
LEU
2
A
ASP
8
A
ASP
8
E
LEU
2
E
LEU
2
E
CYS
9
E
CYS
9
E
CYS
14
E
CYS
14
E
VAL
21
E
VAL
21
B
CYS
14
B
CYS
14
B
VAL
21
B
VAL
21
B
LEU
2
B
LEU
2
B
CYS
9
B
CYS
9
A
LEU
2
A
LEU
2
A
ASP
8
A
ASP
8
A
ILE
16
A
ILE
16
A
VAL
21
A
VAL
21
B
CYS
14
B
CYS
14
B
VAL
21
B
VAL
21
B
LEU
2
B
LEU
2
B
CYS
9
B
CYS
9
E
LEU
2
E
LEU
2
E
CYS
9
E
CYS
9
E
CYS
14
E
CYS
14
E
VAL
21
E
VAL
21
C
CYS
14
C
CYS
14
C
VAL
21
C
VAL
21
C
LEU
2
C
LEU
2
C
CYS
9
C
CYS
9
F
LEU
2
F
LEU
2
F
ASP
8
F
ASP
8
F
ILE
16
F
ILE
16
F
VAL
21
F
VAL
21
D
ILE
16
D
ILE
16
D
VAL
21
D
VAL
21
D
LEU
2
D
LEU
2
D
ASP
8
D
ASP
8
C
LEU
2
C
LEU
2
C
CYS
9
C
CYS
9
C
CYS
14
C
CYS
14
C
VAL
21
C
VAL
21
D
ILE
16
D
ILE
16
D
VAL
21
D
VAL
21
D
LEU
2
D
LEU
2
D
ASP
8
D
ASP
8
F
LEU
2
F
LEU
2
F
ASP
8
F
ASP
8
F
ILE
16
F
ILE
16
F
VAL
21
F
VAL
21
178
P 61 2 2