0.030103 0.000000 0.000000 0.000000 0.023632 0.000000 0.000000 0.000000 0.020247 0.000000 0.000000 0.000000 Camara-Artigas, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.000 90.000 90.000 33.219 42.315 49.391 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C4 H10 O3 106.120 DI(HYDROXYETHYL)ETHER non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N O N 124 N H N 125 N H N 126 N N N 127 S C N 128 N C N 129 N O N 130 S C N 131 N C N 132 N C N 133 N C N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N N N 149 S C N 150 N C N 151 N O N 152 N C N 153 N C N 154 N C N 155 N C N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 N C N 175 N C N 176 N C N 177 N C N 178 N N N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 N C N 200 N C N 201 N S N 202 N C N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N C N 216 N O N 217 N C N 218 N O N 219 N C N 220 N C N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C Y 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C Y 242 N C N 243 N O N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N N N 256 S C N 257 N C N 258 N O N 259 N C N 260 N C N 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 N C N 277 N O N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N S N 287 N O N 288 N O N 289 N O N 290 N O N 291 N N N 292 S C N 293 N C N 294 N O N 295 R C N 296 N O N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N N Y 317 N C Y 318 N C Y 319 N C Y 320 N C Y 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N O N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N doub N 226 N sing N 227 N sing N 228 N sing N 229 N sing Y 230 N doub Y 231 N sing Y 232 N sing N 233 N sing Y 234 N doub N 235 N sing Y 236 N doub N 237 N sing Y 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing Y 303 N doub Y 304 N sing Y 305 N sing N 306 N sing Y 307 N doub Y 308 N sing Y 309 N sing N 310 N sing Y 311 N sing Y 312 N doub N 313 N sing Y 314 N doub N 315 N sing Y 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing Y 331 N doub Y 332 N sing Y 333 N sing N 334 N sing Y 335 N doub N 336 N sing Y 337 N doub N 338 N sing Y 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing to be published 0353 Crystal Structure of the alpha spectrin SH3 domain double mutant V46G-D48G 10.2210/pdb5ihi/pdb pdb_00005ihi 100 1 Pair of KB mirrors for adjustable focusing. Unfocused beam available too PIXEL 2013-03-14 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.97 1.0 XALOC ALBA 0.97 SYNCHROTRON ALBA BEAMLINE XALOC SH3 domain 7129.128 Spectrin alpha chain, non-erythrocytic 1 SH3 domain 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 106.120 DI(HYDROXYETHYL)ETHER 1 syn non-polymer 18.015 water 39 nat water Alpha-II spectrin,Fodrin alpha chain no no MDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEGNGRQGFVPAAYVKKLD MDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEGNGRQGFVPAAYVKKLD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Chicken sample 1 62 SPTAN1, SPTA2 9031 Gallus gallus 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pET26 1 2.73 54.99 0.160 VAPOR DIFFUSION, HANGING DROP 5 0.1M Sodium Acetate, 1 M Ammonium sulphate 298 diffrn_radiation_wavelength pdbx_audit_support chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Author supporting evidence Data collection Data collection Database references Refinement description 1 0 2017-03-29 1 1 2017-09-13 1 2 2024-01-10 _pdbx_audit_support.funding_organization _database_2.pdbx_DOI _database_2.pdbx_database_accession Spain Spanish Ministry of Economy and Competitiveness BIO2012-39922-C02-02 Spain Agencia de Innovacion y Desarrollo de Andalucia P09-CVI-5063 N RCSB Y PDBE 2016-02-29 REL REL SO4 SULFATE ION PEG DI(HYDROXYETHYL)ETHER HOH water 3M0R PDB experimental model SO4 1 2 SO4 SO4 101 A PEG 1 3 PEG PEG 102 A HOH 26 4 HOH HOH 201 A HOH 12 4 HOH HOH 202 A HOH 16 4 HOH HOH 203 A HOH 36 4 HOH HOH 204 A HOH 29 4 HOH HOH 205 A HOH 35 4 HOH HOH 206 A HOH 13 4 HOH HOH 207 A HOH 10 4 HOH HOH 208 A HOH 4 4 HOH HOH 209 A HOH 32 4 HOH HOH 210 A HOH 30 4 HOH HOH 211 A HOH 37 4 HOH HOH 212 A HOH 7 4 HOH HOH 213 A HOH 2 4 HOH HOH 214 A HOH 17 4 HOH HOH 215 A HOH 25 4 HOH HOH 216 A HOH 38 4 HOH HOH 217 A HOH 6 4 HOH HOH 218 A HOH 19 4 HOH HOH 219 A HOH 21 4 HOH HOH 220 A HOH 1 4 HOH HOH 221 A HOH 18 4 HOH HOH 222 A HOH 3 4 HOH HOH 223 A HOH 31 4 HOH HOH 224 A HOH 27 4 HOH HOH 225 A HOH 20 4 HOH HOH 226 A HOH 24 4 HOH HOH 227 A HOH 5 4 HOH HOH 228 A HOH 22 4 HOH HOH 229 A HOH 9 4 HOH HOH 230 A HOH 39 4 HOH HOH 231 A HOH 14 4 HOH HOH 232 A HOH 28 4 HOH HOH 233 A HOH 8 4 HOH HOH 234 A HOH 23 4 HOH HOH 235 A HOH 33 4 HOH HOH 236 A HOH 15 4 HOH HOH 237 A HOH 11 4 HOH HOH 238 A HOH 34 4 HOH HOH 239 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A VAL 9 n 9 VAL 9 A LEU 10 n 10 LEU 10 A ALA 11 n 11 ALA 11 A LEU 12 n 12 LEU 12 A TYR 13 n 13 TYR 13 A ASP 14 n 14 ASP 14 A TYR 15 n 15 TYR 15 A GLN 16 n 16 GLN 16 A GLU 17 n 17 GLU 17 A LYS 18 n 18 LYS 18 A SER 19 n 19 SER 19 A PRO 20 n 20 PRO 20 A ARG 21 n 21 ARG 21 A GLU 22 n 22 GLU 22 A VAL 23 n 23 VAL 23 A THR 24 n 24 THR 24 A MET 25 n 25 MET 25 A LYS 26 n 26 LYS 26 A LYS 27 n 27 LYS 27 A GLY 28 n 28 GLY 28 A ASP 29 n 29 ASP 29 A ILE 30 n 30 ILE 30 A LEU 31 n 31 LEU 31 A THR 32 n 32 THR 32 A LEU 33 n 33 LEU 33 A LEU 34 n 34 LEU 34 A ASN 35 n 35 ASN 35 A SER 36 n 36 SER 36 A THR 37 n 37 THR 37 A ASN 38 n 38 ASN 38 A LYS 39 n 39 LYS 39 A ASP 40 n 40 ASP 40 A TRP 41 n 41 TRP 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A VAL 44 n 44 VAL 44 A GLU 45 n 45 GLU 45 A GLY 46 n 46 GLY 46 A ASN 47 n 47 ASN 47 A GLY 48 n 48 GLY 48 A ARG 49 n 49 ARG 49 A GLN 50 n 50 GLN 50 A GLY 51 n 51 GLY 51 A PHE 52 n 52 PHE 52 A VAL 53 n 53 VAL 53 A PRO 54 n 54 PRO 54 A ALA 55 n 55 ALA 55 A ALA 56 n 56 ALA 56 A TYR 57 n 57 TYR 57 A VAL 58 n 58 VAL 58 A LYS 59 n 59 LYS 59 A LYS 60 n 60 LYS 60 A LEU 61 n 61 LEU 61 A n 62 62 A software_defined_assembly PISA 1 monomeric 390 -8 3500 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ARG 49 A O ARG 49 A N GLY 46 A N GLY 46 A O LYS 43 A O LYS 43 A N LEU 34 A N LEU 34 A O LEU 31 A O LEU 31 A N VAL 9 A N VAL 9 A N LEU 10 A N LEU 10 A O LYS 59 A O LYS 59 1 A CG GLN 16 A CG GLN 16 1 Y 1 A CD GLN 16 A CD GLN 16 1 Y 1 A OE1 GLN 16 A OE1 GLN 16 1 Y 1 A NE2 GLN 16 A NE2 GLN 16 1 Y 1 A CG LYS 26 A CG LYS 26 1 Y 1 A CD LYS 26 A CD LYS 26 1 Y 1 A CE LYS 26 A CE LYS 26 1 Y 1 A NZ LYS 26 A NZ LYS 26 1 Y 1 A CG LYS 59 A CG LYS 59 1 Y 1 A CD LYS 59 A CD LYS 59 1 Y 1 A CE LYS 59 A CE LYS 59 1 Y 1 A NZ LYS 59 A NZ LYS 59 1 Y 1 A MET 1 A MET 1 1 Y 1 A ASP 2 A ASP 2 1 Y 1 A GLU 3 A GLU 3 1 Y 1 A THR 4 A THR 4 1 Y 1 A GLY 5 A GLY 5 1 Y 1 A LYS 6 A LYS 6 1 Y 1 A ASP 62 A ASP 62 1 Y 1 A A HE O ARG HOH 21 201 1.51 1 A ASN 35 -161.38 115.85 65.940 31.2864 17.860 0.1928 0.1677 0.1690 1.4500 19.8190 1187 12650 5.0400 98.8100 0.1700 5 0 0 1 FREE R-VALUE 0.010 MOLECULAR REPLACEMENT 24.9200 0.9000 1.1100 3M0R 1.4500 19.8190 39 496 57.89 42.07 22 0 435 55 0.014 454 1.233 613 0.095 67 0.009 75 10.885 164 0.3546 0.2669 1.5160 151 2767 2918 8 98.0000 0.2695 0.2369 1.5959 135 2814 2949 8 99.0000 0.2629 0.1820 1.6958 143 2846 2989 8 100.0000 0.1709 0.1482 1.8267 166 2769 2935 8 99.0000 0.2015 0.1352 2.0103 140 2826 2966 8 100.0000 0.1580 0.1328 2.3009 126 2794 2920 8 98.0000 0.1810 0.1714 2.8974 169 2782 2951 8 99.0000 0.1864 0.1730 19.8207 157 2757 2914 8 98.0000 19.200 1.450 19.820 5IHI 12697 0.999 0.029 0.019 0.035 1 17.500 39913 3.100 1 99.000 0.556 1.450 1.470 1 3.200 99.000 0.016 7.940 19.820 1 2.900 90.500 data scaling Aimless 0.5.1 phasing PHASER refinement PHENIX data extraction PDB_EXTRACT 3.20 data reduction XDS Crystal Structure of the alpha spectrin SH3 domain double mutant V46G-D48G 1 N N 2 N N 3 N N 4 N N STRUCTURAL PROTEIN SH3-like barrel, structural protein SPTN1_CHICK UNP 1 965 P07751 DETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKKLD 965 1025 5IHI 2 62 P07751 A 1 2 62 1 initiating methionine MET 1 5IHI A P07751 UNP 1 1 VAL conflict GLY 46 5IHI A P07751 UNP 1009 46 1 ASP conflict GLY 48 5IHI A P07751 UNP 1011 48 5 anti-parallel anti-parallel anti-parallel anti-parallel A ARG 49 A ARG 49 A PRO 54 A PRO 54 A TRP 41 A TRP 41 A GLY 46 A GLY 46 A ILE 30 A ILE 30 A ASN 35 A ASN 35 A LEU 8 A LEU 8 A ALA 11 A ALA 11 A VAL 58 A VAL 58 A LYS 60 A LYS 60 binding site for residue SO4 A 101 A SO4 101 Software 4 binding site for residue PEG A 102 A PEG 102 Software 2 A TRP 42 A TRP 42 4 1_555 A LYS 59 A LYS 59 4 1_555 A LYS 60 A LYS 60 4 1_555 A HOH 218 D HOH 4 1_555 A GLU 17 A GLU 17 2 4_446 A TYR 57 A TYR 57 2 1_555 19 P 21 21 21