0.012194 0.000000 0.000000 0.000000 0.010327 0.000000 0.000000 0.000000 0.017304 0.000000 0.000000 0.000000 Lolli, G. Marchand, J.-R. Caflisch, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 82.009 96.837 57.789 C15 H15 N3 S 269.365 2-methyl-~{N}-[(1~{S})-1-thieno[3,2-b]pyridin-6-ylethyl]pyridin-3-amine non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 S C N 3 N N Y 4 N C Y 5 N C N 6 N C Y 7 N N Y 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C Y 17 N S Y 18 N N Y 19 N C N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N N N 36 S C N 37 N C N 38 N O N 39 N C N 40 N O N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N C N 55 N N N 56 N C N 57 N N N 58 N N N 59 N O N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N N N 76 S C N 77 N C N 78 N O N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N N N 93 S C N 94 N C N 95 N O N 96 N C N 97 N C N 98 N O N 99 N O N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 R C N 110 N C N 111 N O N 112 N C N 113 N S N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N N N 123 S C N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N O N 130 N N N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N N N 143 S C N 144 N C N 145 N O N 146 N C N 147 N C N 148 N C N 149 N O N 150 N O N 151 N O N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 N C N 163 N C N 164 N O N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N N N 172 S C N 173 N C N 174 N O N 175 N C Y 176 N C Y 177 N N Y 178 N C Y 179 N C Y 180 N N N 181 N O N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N O N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 S C N 200 N C N 201 N C N 202 N C N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N C N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N C N 246 N C N 247 N N N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C N 269 N C N 270 N S N 271 N C N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C Y 294 N C N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N O N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 R C N 343 N O N 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N N Y 364 N C Y 365 N C Y 366 N C Y 367 N C Y 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C Y 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C N 393 N O N 394 N O N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C N 411 N C N 412 N C N 413 N O N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 1 N sing Y 2 N doub Y 3 N sing N 4 N sing N 5 N sing Y 6 N sing Y 7 N doub N 8 N sing Y 9 N doub Y 10 N sing Y 11 N sing Y 12 N doub N 13 N sing Y 14 N doub Y 15 N sing Y 16 N sing Y 17 N doub Y 18 N sing Y 19 N doub Y 20 N sing Y 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N doub N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N doub N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N doub N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing Y 176 N sing Y 177 N doub Y 178 N doub N 179 N sing Y 180 N sing N 181 N sing Y 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing Y 284 N doub Y 285 N sing Y 286 N sing N 287 N sing Y 288 N doub N 289 N sing Y 290 N doub N 291 N sing Y 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing Y 353 N doub Y 354 N sing Y 355 N sing N 356 N sing Y 357 N doub Y 358 N sing Y 359 N sing N 360 N sing Y 361 N sing Y 362 N doub N 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N doub N 377 N sing N 378 N sing N 379 N sing N 380 N sing Y 381 N doub Y 382 N sing Y 383 N sing N 384 N sing Y 385 N doub N 386 N sing Y 387 N doub N 388 N sing Y 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing US J. Med. Chem. JMCMAR 0151 1520-4804 59 9919 9927 10.1021/acs.jmedchem.6b01258 27731638 Derivatives of 3-Amino-2-methylpyridine as BAZ2B Bromodomain Ligands: In Silico Discovery and in Crystallo Validation. 2016 10.2210/pdb5l99/pdb pdb_00005l99 100 1 PIXEL 2016-05-05 DECTRIS PILATUS 2M SINGLE WAVELENGTH M x-ray 1 1.0 1.0 5.2R ELETTRA 1.0 SYNCHROTRON ELETTRA BEAMLINE 5.2R 13531.574 Bromodomain adjacent to zinc finger domain protein 2B Bromodomain (residues 2054-2168) First two residues SM derive from the expression tag 1 man polymer 269.365 2-methyl-~{N}-[(1~{S})-1-thieno[3,2-b]pyridin-6-ylethyl]pyridin-3-amine 1 syn non-polymer 18.015 water 99 nat water hWALp4 no no SMSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRL VFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKV SMSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRL VFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 116 BAZ2B, KIAA1476 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 4.24 70.99 0.250 VAPOR DIFFUSION, SITTING DROP 7.5 PEG500MME (20%), PEG1000 (2%), PEG3350 (2%), PEG20000 (10%), MPD (2%) 277 chem_comp_atom chem_comp_bond database_2 diffrn_radiation_wavelength pdbx_initial_refinement_model repository Initial release Database references Data collection Database references Refinement description 1 0 2016-10-26 1 1 2016-12-21 1 2 2024-01-10 _database_2.pdbx_DOI _database_2.pdbx_database_accession Switzerland Swiss National Science Foundation Switzerland Swiss Cancer League 5E9K contains the same protein complexed with a similar head group. 5L8T contains the same protein complexed with a similar compound. 5L8U contains the same protein complexed with a similar compound. 5L96 contains the same protein complexed with a similar compound. 5L97 contains the same protein complexed with a similar compound. 5L98 contains the same protein complexed with a similar compound. N PDBE Y PDBE 2016-06-09 REL REL 6S0 2-methyl-~{N}-[(1~{S})-1-thieno[3,2-b]pyridin-6-ylethyl]pyridin-3-amine HOH water 4IR5 PDB experimental model 909 1 2 6S0 6S0 2001 A HOH 97 3 HOH HOH 2101 A HOH 25 3 HOH HOH 2102 A HOH 32 3 HOH HOH 2103 A HOH 87 3 HOH HOH 2104 A HOH 98 3 HOH HOH 2105 A HOH 39 3 HOH HOH 2106 A HOH 10 3 HOH HOH 2107 A HOH 13 3 HOH HOH 2108 A HOH 12 3 HOH HOH 2109 A HOH 57 3 HOH HOH 2110 A HOH 20 3 HOH HOH 2111 A HOH 26 3 HOH HOH 2112 A HOH 11 3 HOH HOH 2113 A HOH 27 3 HOH HOH 2114 A HOH 84 3 HOH HOH 2115 A HOH 23 3 HOH HOH 2116 A HOH 15 3 HOH HOH 2117 A HOH 34 3 HOH HOH 2118 A HOH 2 3 HOH HOH 2119 A HOH 96 3 HOH HOH 2120 A HOH 67 3 HOH HOH 2121 A HOH 18 3 HOH HOH 2122 A HOH 17 3 HOH HOH 2123 A HOH 36 3 HOH HOH 2124 A HOH 54 3 HOH HOH 2125 A HOH 41 3 HOH HOH 2126 A HOH 78 3 HOH HOH 2127 A HOH 28 3 HOH HOH 2128 A HOH 22 3 HOH HOH 2129 A HOH 6 3 HOH HOH 2130 A HOH 40 3 HOH HOH 2131 A HOH 16 3 HOH HOH 2132 A HOH 43 3 HOH HOH 2133 A HOH 51 3 HOH HOH 2134 A HOH 33 3 HOH HOH 2135 A HOH 31 3 HOH HOH 2136 A HOH 80 3 HOH HOH 2137 A HOH 30 3 HOH HOH 2138 A HOH 53 3 HOH HOH 2139 A HOH 52 3 HOH HOH 2140 A HOH 95 3 HOH HOH 2141 A HOH 50 3 HOH HOH 2142 A HOH 64 3 HOH HOH 2143 A HOH 21 3 HOH HOH 2144 A HOH 29 3 HOH HOH 2145 A HOH 46 3 HOH HOH 2146 A HOH 9 3 HOH HOH 2147 A HOH 47 3 HOH HOH 2148 A HOH 1 3 HOH HOH 2149 A HOH 42 3 HOH HOH 2150 A HOH 38 3 HOH HOH 2151 A HOH 7 3 HOH HOH 2152 A HOH 4 3 HOH HOH 2153 A HOH 65 3 HOH HOH 2154 A HOH 19 3 HOH HOH 2155 A HOH 89 3 HOH HOH 2156 A HOH 37 3 HOH HOH 2157 A HOH 35 3 HOH HOH 2158 A HOH 61 3 HOH HOH 2159 A HOH 76 3 HOH HOH 2160 A HOH 24 3 HOH HOH 2161 A HOH 69 3 HOH HOH 2162 A HOH 44 3 HOH HOH 2163 A HOH 8 3 HOH HOH 2164 A HOH 3 3 HOH HOH 2165 A HOH 92 3 HOH HOH 2166 A HOH 63 3 HOH HOH 2167 A HOH 86 3 HOH HOH 2168 A HOH 83 3 HOH HOH 2169 A HOH 94 3 HOH HOH 2170 A HOH 73 3 HOH HOH 2171 A HOH 48 3 HOH HOH 2172 A HOH 5 3 HOH HOH 2173 A HOH 71 3 HOH HOH 2174 A HOH 58 3 HOH HOH 2175 A HOH 55 3 HOH HOH 2176 A HOH 72 3 HOH HOH 2177 A HOH 70 3 HOH HOH 2178 A HOH 77 3 HOH HOH 2179 A HOH 82 3 HOH HOH 2180 A HOH 14 3 HOH HOH 2181 A HOH 74 3 HOH HOH 2182 A HOH 88 3 HOH HOH 2183 A HOH 62 3 HOH HOH 2184 A HOH 85 3 HOH HOH 2185 A HOH 91 3 HOH HOH 2186 A HOH 75 3 HOH HOH 2187 A HOH 56 3 HOH HOH 2188 A HOH 93 3 HOH HOH 2189 A HOH 60 3 HOH HOH 2190 A HOH 81 3 HOH HOH 2191 A HOH 66 3 HOH HOH 2192 A HOH 45 3 HOH HOH 2193 A HOH 49 3 HOH HOH 2194 A HOH 90 3 HOH HOH 2195 A HOH 68 3 HOH HOH 2196 A HOH 99 3 HOH HOH 2197 A HOH 79 3 HOH HOH 2198 A HOH 59 3 HOH HOH 2199 A SER 1856 n 1 SER 1856 A MET 1857 n 2 MET 1857 A SER 1858 n 3 SER 1858 A VAL 1859 n 4 VAL 1859 A LYS 1860 n 5 LYS 1860 A LYS 1861 n 6 LYS 1861 A PRO 1862 n 7 PRO 1862 A LYS 1863 n 8 LYS 1863 A ARG 1864 n 9 ARG 1864 A ASP 1865 n 10 ASP 1865 A ASP 1866 n 11 ASP 1866 A SER 1867 n 12 SER 1867 A LYS 1868 n 13 LYS 1868 A ASP 1869 n 14 ASP 1869 A LEU 1870 n 15 LEU 1870 A ALA 1871 n 16 ALA 1871 A LEU 1872 n 17 LEU 1872 A CYS 1873 n 18 CYS 1873 A SER 1874 n 19 SER 1874 A MET 1875 n 20 MET 1875 A ILE 1876 n 21 ILE 1876 A LEU 1877 n 22 LEU 1877 A THR 1878 n 23 THR 1878 A GLU 1879 n 24 GLU 1879 A MET 1880 n 25 MET 1880 A GLU 1881 n 26 GLU 1881 A THR 1882 n 27 THR 1882 A HIS 1883 n 28 HIS 1883 A GLU 1884 n 29 GLU 1884 A ASP 1885 n 30 ASP 1885 A ALA 1886 n 31 ALA 1886 A TRP 1887 n 32 TRP 1887 A PRO 1888 n 33 PRO 1888 A PHE 1889 n 34 PHE 1889 A LEU 1890 n 35 LEU 1890 A LEU 1891 n 36 LEU 1891 A PRO 1892 n 37 PRO 1892 A VAL 1893 n 38 VAL 1893 A ASN 1894 n 39 ASN 1894 A LEU 1895 n 40 LEU 1895 A LYS 1896 n 41 LYS 1896 A LEU 1897 n 42 LEU 1897 A VAL 1898 n 43 VAL 1898 A PRO 1899 n 44 PRO 1899 A GLY 1900 n 45 GLY 1900 A TYR 1901 n 46 TYR 1901 A LYS 1902 n 47 LYS 1902 A LYS 1903 n 48 LYS 1903 A VAL 1904 n 49 VAL 1904 A ILE 1905 n 50 ILE 1905 A LYS 1906 n 51 LYS 1906 A LYS 1907 n 52 LYS 1907 A PRO 1908 n 53 PRO 1908 A MET 1909 n 54 MET 1909 A ASP 1910 n 55 ASP 1910 A PHE 1911 n 56 PHE 1911 A SER 1912 n 57 SER 1912 A THR 1913 n 58 THR 1913 A ILE 1914 n 59 ILE 1914 A ARG 1915 n 60 ARG 1915 A GLU 1916 n 61 GLU 1916 A LYS 1917 n 62 LYS 1917 A LEU 1918 n 63 LEU 1918 A SER 1919 n 64 SER 1919 A SER 1920 n 65 SER 1920 A GLY 1921 n 66 GLY 1921 A GLN 1922 n 67 GLN 1922 A TYR 1923 n 68 TYR 1923 A PRO 1924 n 69 PRO 1924 A ASN 1925 n 70 ASN 1925 A LEU 1926 n 71 LEU 1926 A GLU 1927 n 72 GLU 1927 A THR 1928 n 73 THR 1928 A PHE 1929 n 74 PHE 1929 A ALA 1930 n 75 ALA 1930 A LEU 1931 n 76 LEU 1931 A ASP 1932 n 77 ASP 1932 A VAL 1933 n 78 VAL 1933 A ARG 1934 n 79 ARG 1934 A LEU 1935 n 80 LEU 1935 A VAL 1936 n 81 VAL 1936 A PHE 1937 n 82 PHE 1937 A ASP 1938 n 83 ASP 1938 A ASN 1939 n 84 ASN 1939 A CYS 1940 n 85 CYS 1940 A GLU 1941 n 86 GLU 1941 A THR 1942 n 87 THR 1942 A PHE 1943 n 88 PHE 1943 A ASN 1944 n 89 ASN 1944 A GLU 1945 n 90 GLU 1945 A ASP 1946 n 91 ASP 1946 A ASP 1947 n 92 ASP 1947 A SER 1948 n 93 SER 1948 A ASP 1949 n 94 ASP 1949 A ILE 1950 n 95 ILE 1950 A GLY 1951 n 96 GLY 1951 A ARG 1952 n 97 ARG 1952 A ALA 1953 n 98 ALA 1953 A GLY 1954 n 99 GLY 1954 A HIS 1955 n 100 HIS 1955 A ASN 1956 n 101 ASN 1956 A MET 1957 n 102 MET 1957 A ARG 1958 n 103 ARG 1958 A LYS 1959 n 104 LYS 1959 A TYR 1960 n 105 TYR 1960 A PHE 1961 n 106 PHE 1961 A GLU 1962 n 107 GLU 1962 A LYS 1963 n 108 LYS 1963 A LYS 1964 n 109 LYS 1964 A TRP 1965 n 110 TRP 1965 A THR 1966 n 111 THR 1966 A ASP 1967 n 112 ASP 1967 A THR 1968 n 113 THR 1968 A PHE 1969 n 114 PHE 1969 A LYS 1970 n 115 LYS 1970 A VAL 1971 n 116 VAL 1971 A 4.3290 -0.2952 -1.5049 0.0966 0.1425 0.5272 -0.5586 -0.6354 -0.6782 0.0514 -0.0168 0.2107 -0.1728 0.2296 0.4780 0.4366 -0.0168 0.0202 0.5413 0.0812 0.5767 refined 1.2775 -34.5742 -9.8331 X-RAY DIFFRACTION 2.3858 -0.7082 -0.1323 1.7077 0.5367 1.6755 0.0634 0.0658 -0.0773 -0.1481 -0.0454 0.1247 -0.1373 0.0002 -0.0292 0.3016 0.0029 -0.0218 0.2566 0.0076 0.2499 refined -20.7816 -17.6518 -4.0530 X-RAY DIFFRACTION 2.3784 -0.5785 -0.5116 4.0889 0.6715 3.1208 -0.2988 -0.4971 -0.2008 0.6581 0.1741 -0.0766 0.0921 0.3955 0.0372 0.4534 0.0516 -0.0423 0.3745 0.0413 0.2602 refined -18.1411 -19.7896 7.3640 X-RAY DIFFRACTION A 0 A 0 X-RAY DIFFRACTION 1 chain 'A' and (resid 1856 through 1868 ) A 0 A 0 X-RAY DIFFRACTION 2 chain 'A' and (resid 1869 through 1943 ) A 0 A 0 X-RAY DIFFRACTION 3 chain 'A' and (resid 1944 through 1971 ) software_defined_assembly PISA 1 monomeric 0 0 7950 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A LYS 1970 -84.05 49.07 120.860 44.8716 24.260 0.2038 0.1773 0.1787 2.0000 48.4190 846 15834 5.3400 99.5700 0.2100 1 FREE R-VALUE 1.340 MOLECULAR REPLACEMENT 24.3900 0.9000 1.1100 4IR5 2.0000 48.4190 99 1065 61.82 48.00 19 0 947 116 0.007 996 0.995 1342 0.039 143 0.004 169 13.623 379 0.2603 0.2594 2.1253 154 2424 2578 6 100.0000 0.2443 0.2150 2.2894 138 2463 2601 6 99.0000 0.1995 0.1936 2.5198 137 2471 2608 6 99.0000 0.2242 0.1871 2.8844 141 2497 2638 6 100.0000 0.1985 0.1828 3.6339 131 2511 2642 6 100.0000 0.1834 0.1497 48.4327 145 2622 2767 6 100.0000 2.000 48.420 5L99 15886 0.999 0.076 1 14.300 6.200 99.900 0.893 2.000 2.050 7651 1158 0.859 0.375 0.970 1 2.100 6.600 0 100.000 0.028 8.940 48.420 1227 213 0.999 0.012 0.031 1 44.100 5.800 0 99.000 data scaling Aimless phasing PHASER refinement PHENIX data extraction PDB_EXTRACT 3.20 data reduction XDS data reduction XDS N Crystal Structure of BAZ2B bromodomain in complex with 3-amino-2-methylpyridine derivative 6 1 N N 2 N N 3 N N A LYS 1868 A LYS 13 HELX_P A HIS 1883 A HIS 28 1 AA1 16 A GLU 1884 A GLU 29 HELX_P A LEU 1890 A LEU 35 5 AA2 7 A GLY 1900 A GLY 45 HELX_P A ILE 1905 A ILE 50 1 AA3 6 A ASP 1910 A ASP 55 HELX_P A SER 1920 A SER 65 1 AA4 11 A ASN 1925 A ASN 70 HELX_P A ASN 1944 A ASN 89 1 AA5 20 A SER 1948 A SER 93 HELX_P A LYS 1970 A LYS 115 1 AA6 23 TRANSCRIPTION four helical bundle, transcription BAZ2B_HUMAN UNP 1 1954 Q9UIF8 Q9UIF8-2 SVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKLVPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVF DNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKV 1954 2067 5L99 1858 1971 Q9UIF8 A 1 3 116 1 expression tag SER 1856 5L99 A Q9UIF8 UNP 1 1 expression tag MET 1857 5L99 A Q9UIF8 UNP 2 binding site for residue 6S0 A 2001 A 6S0 2001 Software 6 A PRO 1888 A PRO 33 6 1_555 A VAL 1893 A VAL 38 6 1_555 A TYR 1901 A TYR 46 6 1_555 A PHE 1943 A PHE 88 6 1_555 A ASN 1944 A ASN 89 6 1_555 A HOH 2107 C HOH 6 1_555 20 C 2 2 21