0.014753 0.000000 0.000000 -0.000000 0.014441 0.000000 0.000000 -0.000000 0.011389 0.00000 0.00000 0.00000 Rupp, B. Naschberger, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 67.782 69.249 87.803 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking K 1 39.098 POTASSIUM ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C16 H34 O9 370.436 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL non-polymer C4 H10 O3 106.120 DI(HYDROXYETHYL)ETHER non-polymer C8 H18 O5 194.226 TETRAETHYLENE GLYCOL non-polymer C6 H14 O4 150.173 TRIETHYLENE GLYCOL non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N K N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N S N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 R C N 252 R C N 253 R C N 254 S C N 255 R C N 256 N C N 257 N C N 258 N C N 259 N N N 260 N O N 261 N O N 262 N O N 263 N O N 264 N O N 265 N O N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N O N 282 N C N 283 N C N 284 N O N 285 N C N 286 N C N 287 N O N 288 N C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N O N 297 N C N 298 N C N 299 N O N 300 N C N 301 N C N 302 N O N 303 N C N 304 N C N 305 N O N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N C N 341 N O N 342 N C N 343 N O N 344 N C N 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N O N 358 N C N 359 N C N 360 N O N 361 N C N 362 N C N 363 N O N 364 N C N 365 N C N 366 N O N 367 N C N 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N C N 389 N O N 390 N C N 391 N O N 392 N C N 393 N C N 394 N O N 395 N C N 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 N C Y 417 N C Y 418 N C Y 419 N C Y 420 N C Y 421 N C Y 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N N N 436 S C N 437 N C N 438 N O N 439 N C N 440 N C N 441 N C N 442 N O N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N N N 453 S C N 454 N C N 455 N O N 456 N C N 457 N O N 458 N O N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N N N 467 S C N 468 N C N 469 N O N 470 R C N 471 N O N 472 N C N 473 N O N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N N N 484 S C N 485 N C N 486 N O N 487 N C Y 488 N C Y 489 N C Y 490 N C Y 491 N N Y 492 N C Y 493 N C Y 494 N C Y 495 N C Y 496 N C N 497 N O N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N N N 511 S C N 512 N C N 513 N O N 514 N C Y 515 N C Y 516 N C Y 517 N C Y 518 N C Y 519 N C Y 520 N C N 521 N O N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 534 N N N 535 S C N 536 N C N 537 N O N 538 N C N 539 N C N 540 N C N 541 N O N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N H N 549 N H N 550 N H N 551 N H N 552 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing Y 405 N doub Y 406 N sing Y 407 N sing N 408 N sing Y 409 N doub N 410 N sing Y 411 N doub N 412 N sing Y 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N doub N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N doub N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N doub N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N doub N 470 N sing N 471 N sing N 472 N sing N 473 N sing Y 474 N doub Y 475 N sing Y 476 N sing N 477 N sing Y 478 N doub Y 479 N sing Y 480 N sing N 481 N sing Y 482 N sing Y 483 N doub N 484 N sing Y 485 N doub N 486 N sing Y 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N doub N 498 N sing N 499 N sing N 500 N sing N 501 N sing Y 502 N doub Y 503 N sing Y 504 N sing N 505 N sing Y 506 N doub N 507 N sing Y 508 N doub N 509 N sing Y 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N doub N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing N 530 N sing N 531 N sing N 532 N sing Acta Crystallogr D Struct Biol 2059-7983 72 1267 1280 10.1107/S205979831601723X 27917827 The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling. 2016 10.2210/pdb5l9d/pdb pdb_00005l9d 100 1 TORROIDAL FOCUSSING MIRROR PIXEL 2015-06-29 DECTRIS PILATUS 6M Si(111) SINGLE WAVELENGTH M x-ray 1 1.0000 1.0 ID29 ESRF 1.0000 SYNCHROTRON ESRF BEAMLINE ID29 23686.490 MOUSE ANTIBODY FAB FRAGMENT, IGG1-KAPPA HEAVY CHAIN 1 nat polymer 23658.104 MOUSE ANTIBODY FAB FRAGMENT, IGG1-KAPPA LIGHT CHAIN 1 nat polymer 194.226 TETRAETHYLENE GLYCOL 2 man non-polymer 370.436 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL 1 man non-polymer 150.173 TRIETHYLENE GLYCOL 1 man non-polymer 106.120 DI(HYDROXYETHYL)ETHER 3 man non-polymer 39.098 POTASSIUM ION 1 man non-polymer 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose 1 man non-polymer 18.015 water 221 nat water no no EVKLEESGPELVKPGASMKMSCKASGYTFTSYIIHWLKQKPGQGLEWIGYINPYNDGSKYNEKFKGKATLTSDKSSSTAY MELSSLASEDSAVYYCTRNYGSDSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC EVKLEESGPELVKPGASMKMSCKASGYTFTSYIIHWLKQKPGQGLEWIGYINPYNDGSKYNEKFKGKATLTSDKSSSTAY MELSSLASEDSAVYYCTRNYGSDSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC H polypeptide(L) no no DIVLTQTPAIMSASLGERVTMTCTANSSVSSNYFHWYQQKPGSSPKLWIYSTSNLASGVPTRFSGSGSGTSYSLTLSSME AEDAATYYCHQYHRSPPTFGSGTKLKMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC DIVLTQTPAIMSASLGERVTMTCTANSSVSSNYFHWYQQKPGSSPKLWIYSTSNLASGVPTRFSGSGSGTSYSLTLSSME AEDAATYYCHQYHRSPPTFGSGTKLKMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC L polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n House Mouse sample 1 220 10090 Mus musculus BALB/C sample 1 215 10090 Mus musculus BALB/C 1 2.19 43.9 BLOCK-SHAPED CRYSTALS WITH SHARP EDGES (0.15 X 0.15 X 0.3 MM) VAPOR DIFFUSION, HANGING DROP 5.8 200NL FAB 10MG/ML IN 20 MM HEPES PH 7.5 REMARK 280 7.5, 150 MM NACL PLUS 200NL 30%W/V PEG 1K, 200MM KF, pH 5.8) 291 Air conditioned room pdbx_audit_support pdbx_database_related chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly pdbx_struct_conn_angle struct_conn struct_conn_type struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Data collection Database references Database references Author supporting evidence Database references Data collection Derived calculations Structure summary Data collection Database references Refinement description Structure summary 1 0 2016-08-03 1 1 2016-11-16 1 2 2016-12-07 1 3 2016-12-21 1 4 2017-09-06 1 5 2017-11-22 1 6 2020-07-29 1 7 2024-01-10 _pdbx_audit_support.funding_organization _pdbx_database_related.db_id _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_symmetry _struct_conn_type.id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession Austria Austrian Science Fund P28395-B26 DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc 5L7X is crystal form II 5LGH IS CRYSTAL FORM II (5L7X) IN SETTING OF 5L88 AND 5L9D (CRYSTAL FORM I) WITH NON-APPARENT ISOMORPHISM N PDBE Y PDBE 2016-06-10 REL REL PG4 TETRAETHYLENE GLYCOL PE8 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL PGE TRIETHYLENE GLYCOL PEG DI(HYDROXYETHYL)ETHER K POTASSIUM ION NAG 2-acetamido-2-deoxy-beta-D-glucopyranose HOH water 1IL1 PDB experimental model PG4 301 3 PG4 PG4 301 H PE8 302 4 PE8 PE8 302 H PGE 303 5 PGE PGE 303 H PEG 304 6 PEG PEG 304 H PG4 305 3 PG4 PG4 305 H K 307 7 K K 306 H PEG 308 6 PEG PEG 307 H PEG 306 6 PEG PEG 301 L NAG 301 8 NAG NAG 302 L HOH 403 9 HOH HOH 401 H HOH 401 9 HOH HOH 402 H HOH 402 9 HOH HOH 403 H HOH 404 9 HOH HOH 404 H HOH 407 9 HOH HOH 405 H HOH 405 9 HOH HOH 406 H HOH 406 9 HOH HOH 407 H HOH 408 9 HOH HOH 408 H HOH 410 9 HOH HOH 409 H HOH 411 9 HOH HOH 410 H HOH 414 9 HOH HOH 411 H HOH 413 9 HOH HOH 412 H HOH 409 9 HOH HOH 413 H HOH 418 9 HOH HOH 414 H HOH 417 9 HOH HOH 415 H HOH 412 9 HOH HOH 416 H HOH 420 9 HOH HOH 417 H HOH 421 9 HOH HOH 418 H HOH 416 9 HOH HOH 419 H HOH 430 9 HOH HOH 420 H HOH 425 9 HOH HOH 421 H HOH 423 9 HOH HOH 422 H HOH 428 9 HOH HOH 423 H HOH 424 9 HOH HOH 424 H HOH 427 9 HOH HOH 425 H HOH 422 9 HOH HOH 426 H HOH 431 9 HOH HOH 427 H HOH 426 9 HOH HOH 428 H HOH 434 9 HOH HOH 429 H HOH 435 9 HOH HOH 430 H HOH 429 9 HOH HOH 431 H HOH 432 9 HOH HOH 432 H HOH 439 9 HOH HOH 433 H HOH 436 9 HOH HOH 434 H HOH 444 9 HOH HOH 435 H HOH 438 9 HOH HOH 436 H HOH 433 9 HOH HOH 437 H HOH 448 9 HOH HOH 438 H HOH 442 9 HOH HOH 439 H HOH 440 9 HOH HOH 440 H HOH 415 9 HOH HOH 441 H HOH 437 9 HOH HOH 442 H HOH 458 9 HOH HOH 443 H HOH 445 9 HOH HOH 444 H HOH 441 9 HOH HOH 445 H HOH 451 9 HOH HOH 446 H HOH 452 9 HOH HOH 447 H HOH 443 9 HOH HOH 448 H HOH 449 9 HOH HOH 449 H HOH 465 9 HOH HOH 450 H HOH 456 9 HOH HOH 451 H HOH 450 9 HOH HOH 452 H HOH 460 9 HOH HOH 453 H HOH 455 9 HOH HOH 454 H HOH 459 9 HOH HOH 455 H HOH 461 9 HOH HOH 456 H HOH 457 9 HOH HOH 457 H HOH 463 9 HOH HOH 458 H HOH 475 9 HOH HOH 459 H HOH 419 9 HOH HOH 460 H HOH 454 9 HOH HOH 461 H HOH 466 9 HOH HOH 462 H HOH 446 9 HOH HOH 463 H HOH 476 9 HOH HOH 464 H HOH 447 9 HOH HOH 465 H HOH 467 9 HOH HOH 466 H HOH 468 9 HOH HOH 467 H HOH 453 9 HOH HOH 468 H HOH 462 9 HOH HOH 469 H HOH 471 9 HOH HOH 470 H HOH 464 9 HOH HOH 471 H HOH 474 9 HOH HOH 472 H HOH 478 9 HOH HOH 473 H HOH 472 9 HOH HOH 474 H HOH 473 9 HOH HOH 475 H HOH 470 9 HOH HOH 476 H HOH 1 9 HOH HOH 477 H HOH 480 9 HOH HOH 478 H HOH 481 9 HOH HOH 479 H HOH 482 9 HOH HOH 480 H HOH 484 9 HOH HOH 481 H HOH 479 9 HOH HOH 482 H HOH 483 9 HOH HOH 483 H HOH 477 9 HOH HOH 484 H HOH 487 9 HOH HOH 485 H HOH 489 9 HOH HOH 486 H HOH 486 9 HOH HOH 487 H HOH 488 9 HOH HOH 488 H HOH 491 9 HOH HOH 489 H HOH 490 9 HOH HOH 490 H HOH 493 9 HOH HOH 491 H HOH 492 9 HOH HOH 492 H HOH 495 9 HOH HOH 493 H HOH 496 9 HOH HOH 494 H HOH 498 9 HOH HOH 495 H HOH 500 9 HOH HOH 496 H HOH 497 9 HOH HOH 497 H HOH 494 9 HOH HOH 498 H HOH 499 9 HOH HOH 499 H HOH 501 9 HOH HOH 500 H HOH 503 9 HOH HOH 501 H HOH 504 9 HOH HOH 502 H HOH 502 9 HOH HOH 503 H HOH 505 9 HOH HOH 504 H HOH 508 9 HOH HOH 505 H HOH 509 9 HOH HOH 506 H HOH 510 9 HOH HOH 507 H HOH 512 9 HOH HOH 508 H HOH 507 9 HOH HOH 509 H HOH 511 9 HOH HOH 510 H HOH 506 9 HOH HOH 511 H HOH 513 9 HOH HOH 512 H HOH 514 9 HOH HOH 513 H HOH 485 9 HOH HOH 514 H HOH 515 9 HOH HOH 515 H HOH 516 9 HOH HOH 516 H HOH 517 9 HOH HOH 517 H HOH 519 9 HOH HOH 518 H HOH 518 9 HOH HOH 519 H HOH 523 9 HOH HOH 520 H HOH 522 9 HOH HOH 521 H HOH 521 9 HOH HOH 522 H HOH 520 9 HOH HOH 523 H HOH 524 9 HOH HOH 524 H HOH 526 9 HOH HOH 525 H HOH 525 9 HOH HOH 526 H HOH 527 9 HOH HOH 527 H HOH 528 9 HOH HOH 528 H HOH 401 9 HOH HOH 401 L HOH 402 9 HOH HOH 402 L HOH 403 9 HOH HOH 403 L HOH 405 9 HOH HOH 404 L HOH 404 9 HOH HOH 405 L HOH 408 9 HOH HOH 406 L HOH 406 9 HOH HOH 407 L HOH 407 9 HOH HOH 408 L HOH 409 9 HOH HOH 409 L HOH 411 9 HOH HOH 410 L HOH 415 9 HOH HOH 411 L HOH 412 9 HOH HOH 412 L HOH 417 9 HOH HOH 413 L HOH 421 9 HOH HOH 414 L HOH 416 9 HOH HOH 415 L HOH 414 9 HOH HOH 416 L HOH 410 9 HOH HOH 417 L HOH 419 9 HOH HOH 418 L HOH 425 9 HOH HOH 419 L HOH 418 9 HOH HOH 420 L HOH 422 9 HOH HOH 421 L HOH 429 9 HOH HOH 422 L HOH 423 9 HOH HOH 423 L HOH 432 9 HOH HOH 424 L HOH 428 9 HOH HOH 425 L HOH 426 9 HOH HOH 426 L HOH 439 9 HOH HOH 427 L HOH 430 9 HOH HOH 428 L HOH 434 9 HOH HOH 429 L HOH 427 9 HOH HOH 430 L HOH 431 9 HOH HOH 431 L HOH 433 9 HOH HOH 432 L HOH 437 9 HOH HOH 433 L HOH 435 9 HOH HOH 434 L HOH 438 9 HOH HOH 435 L HOH 441 9 HOH HOH 436 L HOH 440 9 HOH HOH 437 L HOH 442 9 HOH HOH 438 L HOH 424 9 HOH HOH 439 L HOH 443 9 HOH HOH 440 L HOH 436 9 HOH HOH 441 L HOH 444 9 HOH HOH 442 L HOH 447 9 HOH HOH 443 L HOH 450 9 HOH HOH 444 L HOH 420 9 HOH HOH 445 L HOH 448 9 HOH HOH 446 L HOH 446 9 HOH HOH 447 L HOH 452 9 HOH HOH 448 L HOH 454 9 HOH HOH 449 L HOH 453 9 HOH HOH 450 L HOH 451 9 HOH HOH 451 L HOH 485 9 HOH HOH 452 L HOH 457 9 HOH HOH 453 L HOH 445 9 HOH HOH 454 L HOH 455 9 HOH HOH 455 L HOH 449 9 HOH HOH 456 L HOH 462 9 HOH HOH 457 L HOH 465 9 HOH HOH 458 L HOH 467 9 HOH HOH 459 L HOH 468 9 HOH HOH 460 L HOH 459 9 HOH HOH 461 L HOH 463 9 HOH HOH 462 L HOH 461 9 HOH HOH 463 L HOH 456 9 HOH HOH 464 L HOH 466 9 HOH HOH 465 L HOH 464 9 HOH HOH 466 L HOH 458 9 HOH HOH 467 L HOH 460 9 HOH HOH 468 L HOH 413 9 HOH HOH 469 L HOH 469 9 HOH HOH 470 L HOH 473 9 HOH HOH 471 L HOH 474 9 HOH HOH 472 L HOH 472 9 HOH HOH 473 L HOH 470 9 HOH HOH 474 L HOH 477 9 HOH HOH 475 L HOH 475 9 HOH HOH 476 L HOH 471 9 HOH HOH 477 L HOH 479 9 HOH HOH 478 L HOH 478 9 HOH HOH 479 L HOH 476 9 HOH HOH 480 L HOH 480 9 HOH HOH 481 L HOH 482 9 HOH HOH 482 L HOH 481 9 HOH HOH 483 L HOH 483 9 HOH HOH 484 L HOH 484 9 HOH HOH 485 L HOH 486 9 HOH HOH 486 L HOH 488 9 HOH HOH 487 L HOH 489 9 HOH HOH 488 L HOH 487 9 HOH HOH 489 L HOH 490 9 HOH HOH 490 L HOH 491 9 HOH HOH 491 L HOH 492 9 HOH HOH 492 L HOH 493 9 HOH HOH 493 L GLU 1 n 1 GLU 1 H VAL 2 n 2 VAL 2 H LYS 3 n 3 LYS 3 H LEU 4 n 4 LEU 4 H GLU 5 n 5 GLU 5 H GLU 6 n 6 GLU 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H PRO 9 n 9 PRO 9 H GLU 10 n 10 GLU 10 H LEU 11 n 11 LEU 11 H VAL 12 n 12 VAL 12 H LYS 13 n 13 LYS 13 H PRO 14 n 14 PRO 14 H GLY 15 n 15 GLY 15 H ALA 16 n 16 ALA 16 H SER 17 n 17 SER 17 H MET 18 n 18 MET 18 H LYS 19 n 19 LYS 19 H MET 20 n 20 MET 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H LYS 23 n 23 LYS 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H TYR 27 n 27 TYR 27 H THR 28 n 28 THR 28 H PHE 29 n 29 PHE 29 H THR 30 n 30 THR 30 H SER 31 n 31 SER 31 H TYR 32 n 32 TYR 32 H ILE 33 n 33 ILE 33 H ILE 34 n 34 ILE 34 H HIS 35 n 35 HIS 35 H TRP 36 n 36 TRP 36 H LEU 37 n 37 LEU 37 H LYS 38 n 38 LYS 38 H GLN 39 n 39 GLN 39 H LYS 40 n 40 LYS 40 H PRO 41 n 41 PRO 41 H GLY 42 n 42 GLY 42 H GLN 43 n 43 GLN 43 H GLY 44 n 44 GLY 44 H LEU 45 n 45 LEU 45 H GLU 46 n 46 GLU 46 H TRP 47 n 47 TRP 47 H ILE 48 n 48 ILE 48 H GLY 49 n 49 GLY 49 H TYR 50 n 50 TYR 50 H ILE 51 n 51 ILE 51 H ASN 52 n 52 ASN 52 H PRO 52 n 53 A PRO 52 H TYR 53 n 54 TYR 53 H ASN 54 n 55 ASN 54 H ASP 55 n 56 ASP 55 H GLY 56 n 57 GLY 56 H SER 57 n 58 SER 57 H LYS 58 n 59 LYS 58 H TYR 59 n 60 TYR 59 H ASN 60 n 61 ASN 60 H GLU 61 n 62 GLU 61 H LYS 62 n 63 LYS 62 H PHE 63 n 64 PHE 63 H LYS 64 n 65 LYS 64 H GLY 65 n 66 GLY 65 H LYS 66 n 67 LYS 66 H ALA 67 n 68 ALA 67 H THR 68 n 69 THR 68 H LEU 69 n 70 LEU 69 H THR 70 n 71 THR 70 H SER 71 n 72 SER 71 H ASP 72 n 73 ASP 72 H LYS 73 n 74 LYS 73 H SER 74 n 75 SER 74 H SER 75 n 76 SER 75 H SER 76 n 77 SER 76 H THR 77 n 78 THR 77 H ALA 78 n 79 ALA 78 H TYR 79 n 80 TYR 79 H MET 80 n 81 MET 80 H GLU 81 n 82 GLU 81 H LEU 82 n 83 LEU 82 H SER 82 n 84 A SER 82 H SER 82 n 85 B SER 82 H LEU 82 n 86 C LEU 82 H ALA 83 n 87 ALA 83 H SER 84 n 88 SER 84 H GLU 85 n 89 GLU 85 H ASP 86 n 90 ASP 86 H SER 87 n 91 SER 87 H ALA 88 n 92 ALA 88 H VAL 89 n 93 VAL 89 H TYR 90 n 94 TYR 90 H TYR 91 n 95 TYR 91 H CYS 92 n 96 CYS 92 H THR 93 n 97 THR 93 H ARG 94 n 98 ARG 94 H ASN 95 n 99 ASN 95 H TYR 96 n 100 TYR 96 H GLY 97 n 101 GLY 97 H SER 98 n 102 SER 98 H ASP 99 n 103 ASP 99 H SER 100 n 104 SER 100 H LEU 100 n 105 A LEU 100 H ASP 101 n 106 ASP 101 H TYR 102 n 107 TYR 102 H TRP 103 n 108 TRP 103 H GLY 104 n 109 GLY 104 H GLN 105 n 110 GLN 105 H GLY 106 n 111 GLY 106 H THR 107 n 112 THR 107 H THR 108 n 113 THR 108 H LEU 109 n 114 LEU 109 H THR 110 n 115 THR 110 H VAL 111 n 116 VAL 111 H SER 112 n 117 SER 112 H SER 113 n 118 SER 113 H ALA 114 n 119 ALA 114 H LYS 115 n 120 LYS 115 H THR 116 n 121 THR 116 H THR 117 n 122 THR 117 H PRO 118 n 123 PRO 118 H PRO 119 n 124 PRO 119 H SER 120 n 125 SER 120 H VAL 121 n 126 VAL 121 H TYR 122 n 127 TYR 122 H PRO 123 n 128 PRO 123 H LEU 124 n 129 LEU 124 H ALA 125 n 130 ALA 125 H PRO 126 n 131 PRO 126 H GLY 127 n 132 GLY 127 H SER 128 n 133 SER 128 H n 134 129 H n 135 130 H n 136 131 H n 137 132 H ASN 133 n 138 ASN 133 H SER 134 n 139 SER 134 H MET 135 n 140 MET 135 H VAL 136 n 141 VAL 136 H THR 137 n 142 THR 137 H LEU 138 n 143 LEU 138 H GLY 139 n 144 GLY 139 H CYS 140 n 145 CYS 140 H LEU 141 n 146 LEU 141 H VAL 142 n 147 VAL 142 H LYS 143 n 148 LYS 143 H GLY 144 n 149 GLY 144 H TYR 145 n 150 TYR 145 H PHE 146 n 151 PHE 146 H PRO 147 n 152 PRO 147 H GLU 148 n 153 GLU 148 H PRO 149 n 154 PRO 149 H VAL 150 n 155 VAL 150 H THR 151 n 156 THR 151 H VAL 152 n 157 VAL 152 H THR 153 n 158 THR 153 H TRP 154 n 159 TRP 154 H ASN 155 n 160 ASN 155 H SER 156 n 161 SER 156 H GLY 157 n 162 GLY 157 H SER 158 n 163 SER 158 H LEU 159 n 164 LEU 159 H SER 160 n 165 SER 160 H SER 161 n 166 SER 161 H GLY 162 n 167 GLY 162 H VAL 163 n 168 VAL 163 H HIS 164 n 169 HIS 164 H THR 165 n 170 THR 165 H PHE 166 n 171 PHE 166 H PRO 167 n 172 PRO 167 H ALA 168 n 173 ALA 168 H VAL 169 n 174 VAL 169 H LEU 170 n 175 LEU 170 H GLN 171 n 176 GLN 171 H SER 172 n 177 SER 172 H ASP 173 n 178 ASP 173 H LEU 174 n 179 LEU 174 H TYR 175 n 180 TYR 175 H THR 176 n 181 THR 176 H LEU 177 n 182 LEU 177 H SER 178 n 183 SER 178 H SER 179 n 184 SER 179 H SER 180 n 185 SER 180 H VAL 181 n 186 VAL 181 H THR 182 n 187 THR 182 H VAL 183 n 188 VAL 183 H PRO 184 n 189 PRO 184 H SER 185 n 190 SER 185 H SER 186 n 191 SER 186 H THR 187 n 192 THR 187 H TRP 188 n 193 TRP 188 H PRO 189 n 194 PRO 189 H SER 190 n 195 SER 190 H GLU 191 n 196 GLU 191 H THR 192 n 197 THR 192 H VAL 193 n 198 VAL 193 H THR 194 n 199 THR 194 H CYS 195 n 200 CYS 195 H ASN 196 n 201 ASN 196 H VAL 197 n 202 VAL 197 H ALA 198 n 203 ALA 198 H HIS 199 n 204 HIS 199 H PRO 200 n 205 PRO 200 H ALA 201 n 206 ALA 201 H SER 202 n 207 SER 202 H SER 203 n 208 SER 203 H THR 204 n 209 THR 204 H LYS 205 n 210 LYS 205 H VAL 206 n 211 VAL 206 H ASP 207 n 212 ASP 207 H LYS 208 n 213 LYS 208 H LYS 209 n 214 LYS 209 H ILE 210 n 215 ILE 210 H VAL 211 n 216 VAL 211 H PRO 212 n 217 PRO 212 H ARG 213 n 218 ARG 213 H ASP 214 n 219 ASP 214 H n 220 215 H n 1 1 L ILE 2 n 2 ILE 2 L VAL 3 n 3 VAL 3 L LEU 4 n 4 LEU 4 L THR 5 n 5 THR 5 L GLN 6 n 6 GLN 6 L THR 7 n 7 THR 7 L PRO 8 n 8 PRO 8 L ALA 9 n 9 ALA 9 L ILE 10 n 10 ILE 10 L MET 11 n 11 MET 11 L SER 12 n 12 SER 12 L ALA 13 n 13 ALA 13 L SER 14 n 14 SER 14 L LEU 15 n 15 LEU 15 L GLY 16 n 16 GLY 16 L GLU 17 n 17 GLU 17 L ARG 18 n 18 ARG 18 L VAL 19 n 19 VAL 19 L THR 20 n 20 THR 20 L MET 21 n 21 MET 21 L THR 22 n 22 THR 22 L CYS 23 n 23 CYS 23 L THR 24 n 24 THR 24 L ALA 25 n 25 ALA 25 L ASN 26 n 26 ASN 26 L SER 27 n 27 SER 27 L SER 27 n 28 A SER 27 L VAL 28 n 29 VAL 28 L SER 29 n 30 SER 29 L SER 30 n 31 SER 30 L ASN 31 n 32 ASN 31 L TYR 32 n 33 TYR 32 L PHE 33 n 34 PHE 33 L HIS 34 n 35 HIS 34 L TRP 35 n 36 TRP 35 L TYR 36 n 37 TYR 36 L GLN 37 n 38 GLN 37 L GLN 38 n 39 GLN 38 L LYS 39 n 40 LYS 39 L PRO 40 n 41 PRO 40 L GLY 41 n 42 GLY 41 L SER 42 n 43 SER 42 L SER 43 n 44 SER 43 L PRO 44 n 45 PRO 44 L LYS 45 n 46 LYS 45 L LEU 46 n 47 LEU 46 L TRP 47 n 48 TRP 47 L ILE 48 n 49 ILE 48 L TYR 49 n 50 TYR 49 L SER 50 n 51 SER 50 L THR 51 n 52 THR 51 L SER 52 n 53 SER 52 L ASN 53 n 54 ASN 53 L LEU 54 n 55 LEU 54 L ALA 55 n 56 ALA 55 L SER 56 n 57 SER 56 L GLY 57 n 58 GLY 57 L VAL 58 n 59 VAL 58 L PRO 59 n 60 PRO 59 L THR 60 n 61 THR 60 L ARG 61 n 62 ARG 61 L PHE 62 n 63 PHE 62 L SER 63 n 64 SER 63 L GLY 64 n 65 GLY 64 L SER 65 n 66 SER 65 L GLY 66 n 67 GLY 66 L SER 67 n 68 SER 67 L GLY 68 n 69 GLY 68 L THR 69 n 70 THR 69 L SER 70 n 71 SER 70 L TYR 71 n 72 TYR 71 L SER 72 n 73 SER 72 L LEU 73 n 74 LEU 73 L THR 74 n 75 THR 74 L LEU 75 n 76 LEU 75 L SER 76 n 77 SER 76 L SER 77 n 78 SER 77 L MET 78 n 79 MET 78 L GLU 79 n 80 GLU 79 L ALA 80 n 81 ALA 80 L GLU 81 n 82 GLU 81 L ASP 82 n 83 ASP 82 L ALA 83 n 84 ALA 83 L ALA 84 n 85 ALA 84 L THR 85 n 86 THR 85 L TYR 86 n 87 TYR 86 L TYR 87 n 88 TYR 87 L CYS 88 n 89 CYS 88 L HIS 89 n 90 HIS 89 L GLN 90 n 91 GLN 90 L TYR 91 n 92 TYR 91 L HIS 92 n 93 HIS 92 L ARG 93 n 94 ARG 93 L SER 94 n 95 SER 94 L PRO 95 n 96 PRO 95 L PRO 96 n 97 PRO 96 L THR 97 n 98 THR 97 L PHE 98 n 99 PHE 98 L GLY 99 n 100 GLY 99 L SER 100 n 101 SER 100 L GLY 101 n 102 GLY 101 L THR 102 n 103 THR 102 L LYS 103 n 104 LYS 103 L LEU 104 n 105 LEU 104 L LYS 105 n 106 LYS 105 L MET 106 n 107 MET 106 L LYS 107 n 108 LYS 107 L ARG 108 n 109 ARG 108 L ALA 109 n 110 ALA 109 L ASP 110 n 111 ASP 110 L ALA 111 n 112 ALA 111 L ALA 112 n 113 ALA 112 L PRO 113 n 114 PRO 113 L THR 114 n 115 THR 114 L VAL 115 n 116 VAL 115 L SER 116 n 117 SER 116 L ILE 117 n 118 ILE 117 L PHE 118 n 119 PHE 118 L PRO 119 n 120 PRO 119 L PRO 120 n 121 PRO 120 L SER 121 n 122 SER 121 L SER 122 n 123 SER 122 L GLU 123 n 124 GLU 123 L GLN 124 n 125 GLN 124 L LEU 125 n 126 LEU 125 L THR 126 n 127 THR 126 L SER 127 n 128 SER 127 L GLY 128 n 129 GLY 128 L GLY 129 n 130 GLY 129 L ALA 130 n 131 ALA 130 L SER 131 n 132 SER 131 L VAL 132 n 133 VAL 132 L VAL 133 n 134 VAL 133 L CYS 134 n 135 CYS 134 L PHE 135 n 136 PHE 135 L LEU 136 n 137 LEU 136 L ASN 137 n 138 ASN 137 L ASN 138 n 139 ASN 138 L PHE 139 n 140 PHE 139 L TYR 140 n 141 TYR 140 L PRO 141 n 142 PRO 141 L LYS 142 n 143 LYS 142 L ASP 143 n 144 ASP 143 L ILE 144 n 145 ILE 144 L ASN 145 n 146 ASN 145 L VAL 146 n 147 VAL 146 L LYS 147 n 148 LYS 147 L TRP 148 n 149 TRP 148 L LYS 149 n 150 LYS 149 L ILE 150 n 151 ILE 150 L ASP 151 n 152 ASP 151 L GLY 152 n 153 GLY 152 L SER 153 n 154 SER 153 L GLU 154 n 155 GLU 154 L ARG 155 n 156 ARG 155 L GLN 156 n 157 GLN 156 L ASN 157 n 158 ASN 157 L GLY 158 n 159 GLY 158 L VAL 159 n 160 VAL 159 L LEU 160 n 161 LEU 160 L ASN 161 n 162 ASN 161 L SER 162 n 163 SER 162 L TRP 163 n 164 TRP 163 L THR 164 n 165 THR 164 L ASP 165 n 166 ASP 165 L GLN 166 n 167 GLN 166 L ASP 167 n 168 ASP 167 L SER 168 n 169 SER 168 L LYS 169 n 170 LYS 169 L ASP 170 n 171 ASP 170 L SER 171 n 172 SER 171 L THR 172 n 173 THR 172 L TYR 173 n 174 TYR 173 L SER 174 n 175 SER 174 L MET 175 n 176 MET 175 L SER 176 n 177 SER 176 L SER 177 n 178 SER 177 L THR 178 n 179 THR 178 L LEU 179 n 180 LEU 179 L THR 180 n 181 THR 180 L LEU 181 n 182 LEU 181 L THR 182 n 183 THR 182 L LYS 183 n 184 LYS 183 L ASP 184 n 185 ASP 184 L GLU 185 n 186 GLU 185 L TYR 186 n 187 TYR 186 L GLU 187 n 188 GLU 187 L ARG 188 n 189 ARG 188 L HIS 189 n 190 HIS 189 L ASN 190 n 191 ASN 190 L SER 191 n 192 SER 191 L TYR 192 n 193 TYR 192 L THR 193 n 194 THR 193 L CYS 194 n 195 CYS 194 L GLU 195 n 196 GLU 195 L ALA 196 n 197 ALA 196 L THR 197 n 198 THR 197 L HIS 198 n 199 HIS 198 L LYS 199 n 200 LYS 199 L THR 200 n 201 THR 200 L SER 201 n 202 SER 201 L THR 202 n 203 THR 202 L SER 203 n 204 SER 203 L PRO 204 n 205 PRO 204 L ILE 205 n 206 ILE 205 L VAL 206 n 207 VAL 206 L LYS 207 n 208 LYS 207 L SER 208 n 209 SER 208 L PHE 209 n 210 PHE 209 L ASN 210 n 211 ASN 210 L ARG 211 n 212 ARG 211 L ASN 212 n 213 ASN 212 L GLU 213 n 214 GLU 213 L CYS 214 n 215 CYS 214 L 0.8411 0.1481 0.3138 0.2237 0.0601 0.6644 0.0663 0.0288 -0.0425 0.1041 -0.0159 -0.0513 0.0637 -0.0449 -0.0504 0.0977 -0.0184 -0.0471 0.0510 0.0279 0.0313 refined 4.2931 2.0673 22.7650 X-RAY DIFFRACTION 0.0824 0.1447 -0.1588 1.1792 -0.0310 0.5069 0.0347 -0.0315 0.0212 -0.0137 0.0310 -0.0020 0.0177 0.0753 -0.0657 0.1023 0.0073 -0.0128 0.0718 -0.0288 0.0159 refined 23.4065 32.1186 32.2646 X-RAY DIFFRACTION 0.0869 0.0565 -0.0497 0.5517 -0.0073 0.6591 0.0140 0.0476 0.0157 0.0159 0.0171 -0.0553 0.0465 -0.0378 -0.0311 0.0412 0.0122 0.0079 0.0933 -0.0162 0.0329 refined 6.6458 11.2664 2.2437 X-RAY DIFFRACTION 0.5834 0.0414 0.2028 0.0139 0.0392 1.0212 0.0275 -0.0142 -0.0237 0.0130 0.0269 -0.0028 -0.0268 0.0888 -0.0544 0.0789 0.0194 -0.0048 0.1114 -0.0210 0.0107 refined 29.2849 26.4413 18.9307 X-RAY DIFFRACTION L 2 L 107 X-RAY DIFFRACTION 1 L 301 L 301 X-RAY DIFFRACTION 1 L 108 L 213 X-RAY DIFFRACTION 2 H 1 H 113 X-RAY DIFFRACTION 3 H 114 H 214 X-RAY DIFFRACTION 4 software_defined_assembly PISA 2 dimeric 6350 2 19370 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H SER 71 A O SER 72 1_555 103.3 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H ASP 207 A O ASP 212 1_555 118.4 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 H ASP 207 A O ASP 212 1_555 15.9 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H ASP 207 A OD2 ASP 212 1_555 119.0 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 H ASP 207 A OD2 ASP 212 1_555 15.7 H ASP 207 A O ASP 212 1_555 H K 306 H K K 4_455 H ASP 207 A OD2 ASP 212 1_555 4.0 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H HOH 409 L O HOH 4_555 122.8 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 H HOH 409 L O HOH 4_555 19.5 H ASP 207 A O ASP 212 1_555 H K 306 H K K 4_455 H HOH 409 L O HOH 4_555 5.3 H ASP 207 A OD2 ASP 212 1_555 H K 306 H K K 4_455 H HOH 409 L O HOH 4_555 3.9 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H HOH 442 L O HOH 1_555 119.0 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 H HOH 442 L O HOH 1_555 16.5 H ASP 207 A O ASP 212 1_555 H K 306 H K K 4_455 H HOH 442 L O HOH 1_555 0.7 H ASP 207 A OD2 ASP 212 1_555 H K 306 H K K 4_455 H HOH 442 L O HOH 1_555 4.4 H HOH 409 L O HOH 4_555 H K 306 H K K 4_455 H HOH 442 L O HOH 1_555 5.2 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H HOH 491 L O HOH 1_555 115.6 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 H HOH 491 L O HOH 1_555 12.4 H ASP 207 A O ASP 212 1_555 H K 306 H K K 4_455 H HOH 491 L O HOH 1_555 4.3 H ASP 207 A OD2 ASP 212 1_555 H K 306 H K K 4_455 H HOH 491 L O HOH 1_555 3.5 H HOH 409 L O HOH 4_555 H K 306 H K K 4_455 H HOH 491 L O HOH 1_555 7.2 H HOH 442 L O HOH 1_555 H K 306 H K K 4_455 H HOH 491 L O HOH 1_555 5.0 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 119.5 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 16.3 H ASP 207 A O ASP 212 1_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 3.2 H ASP 207 A OD2 ASP 212 1_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 1.1 H HOH 409 L O HOH 4_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 3.2 H HOH 442 L O HOH 1_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 3.5 H HOH 491 L O HOH 1_555 H K 306 H K K 4_455 H HOH 513 L O HOH 4_555 3.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H N GLU 5 A N GLU 5 H O LYS 23 A O LYS 23 H N MET 18 A N MET 18 H O LEU 82 A O LEU 83 H O THR 77 A O THR 78 H N ASP 72 A N ASP 73 H N VAL 12 A N VAL 12 H O THR 110 A O THR 115 H O LEU 109 A O LEU 114 H N ALA 88 A N ALA 92 H O THR 93 A O THR 97 H N HIS 35 A N HIS 35 H N LYS 38 A N LYS 38 H O GLU 46 A O GLU 46 H N ASN 52 A N ASN 52 H O GLY 56 A O GLY 57 H N VAL 12 A N VAL 12 H O THR 110 A O THR 115 H O LEU 109 A O LEU 114 H N ALA 88 A N ALA 92 H N ARG 94 A N ARG 98 H O TYR 102 A O TYR 107 H N SER 120 A N SER 125 H O LYS 143 A O LYS 148 H N VAL 142 A N VAL 147 H O LEU 177 A O LEU 182 H O SER 180 A O SER 185 H N HIS 164 A N HIS 169 H N SER 120 A N SER 125 H O LYS 143 A O LYS 148 H N VAL 142 A N VAL 147 H O LEU 177 A O LEU 182 H O THR 176 A O THR 181 H N VAL 169 A N VAL 174 H N THR 153 A N THR 158 H O ASN 196 A O ASN 201 H N CYS 195 A N CYS 200 H O LYS 208 A O LYS 213 L N THR 5 B N THR 5 L O THR 24 B O THR 24 L N VAL 19 B N VAL 19 L O LEU 75 B O LEU 76 L O THR 74 B O THR 75 L N SER 63 B N SER 64 L N MET 11 B N MET 11 L O LYS 105 B O LYS 106 L O LEU 104 B O LEU 105 L N ALA 84 B N ALA 85 L O THR 85 B O THR 86 L N GLN 38 B N GLN 39 L N TRP 35 B N TRP 36 L O TRP 47 B O TRP 48 L N TYR 49 B N TYR 50 L O ASN 53 B O ASN 54 L N MET 11 B N MET 11 L O LYS 105 B O LYS 106 L O LEU 104 B O LEU 105 L N ALA 84 B N ALA 85 L N GLN 90 B N GLN 91 L O THR 97 B O THR 98 L N SER 116 B N SER 117 L O PHE 135 B O PHE 136 L N VAL 132 B N VAL 133 L O LEU 179 B O LEU 180 L O SER 176 B O SER 177 L N SER 162 B N SER 163 L O SER 153 B O SER 154 L N ILE 150 B N ILE 151 L N ASN 145 B N ASN 146 L O THR 197 B O THR 198 L N CYS 194 B N CYS 195 L O LYS 207 B O LYS 208 1 H ALA 129 A ALA 134 1 Y 1 H ALA 130 A ALA 135 1 Y 1 H GLN 131 A GLN 136 1 Y 1 H THR 132 A THR 137 1 Y 1 H CYS 215 A CYS 220 1 Y 1 L ASP 1 B ASP 1 1 Y 1 H TYR 96 -112.81 -164.20 1 L THR 51 73.86 -49.09 1 L ALA 84 179.58 175.51 1 L ASP 151 39.64 47.41 35.896 1.75 -0.00 0.00 -0.56 -0.00 -1.20 0.967 0.956 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.21505 0.17623 0.17819 1.88 47.38 1659 32346 4.9 99.14 8.279 0.119 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.155 0.139 0.80 0.80 1.20 1IL1 MAXIMUM LIKELIHOOD MASK 1.88 47.38 221 3598 97 0 3280 0.009 0.020 3565 0.002 0.020 3225 1.355 1.964 4839 0.864 3.000 7538 6.530 5.022 462 37.013 24.580 131 12.886 15.027 566 22.747 15.000 9 0.080 0.200 532 0.005 0.021 3948 0.002 0.020 763 2.076 5.532 1764 2.071 5.524 1763 3.049 10.310 2216 3.051 10.320 2217 3.018 6.350 1801 3.018 6.352 1802 4.477 11.431 2616 6.392 26.607 3898 6.364 26.571 3885 0.326 0.330 1.929 122 2299 20 96.69 36.6 1.88 54.37 5L9D 34249 0.076 1 10 99.8 4.5 99.4 0.8 1.88 1.95 1.4 1 3.2 97.7 refinement REFMAC 5.8.0135 data reduction XDS data scaling SCALA phasing BALBES N AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSYLATED, CRYSTAL FORM I, parsimonious model 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 3 N N 7 N N 6 N N 6 N N 8 N N 9 N N 9 N N H THR 28 A THR 28 HELX_P H TYR 32 A TYR 32 5 AA1 5 H GLU 61 A GLU 62 HELX_P H LYS 64 A LYS 65 5 AA2 4 H LYS 73 A LYS 74 HELX_P H SER 75 A SER 76 5 AA3 3 H ALA 83 A ALA 87 HELX_P H SER 87 A SER 91 5 AA4 5 H GLY 97 A GLY 101 HELX_P H ASP 99 A ASP 103 5 AA5 3 H PRO 200 A PRO 205 HELX_P H SER 203 A SER 208 5 AA6 4 L SER 29 B SER 30 HELX_P L ASN 31 B ASN 32 5 AA7 3 L GLU 79 B GLU 80 HELX_P L ALA 83 B ALA 84 5 AA8 5 L SER 121 B SER 122 HELX_P L SER 127 B SER 128 1 AA9 7 L LYS 183 B LYS 184 HELX_P L GLU 187 B GLU 188 1 AB1 5 L ASN 212 B ASN 213 HELX_P L CYS 214 B CYS 215 5 AB2 3 disulf 2.082 H CYS 22 A SG CYS 22 1_555 H CYS 92 A SG CYS 96 1_555 disulf 2.038 A A H CYS 140 A SG CYS 145 1_555 H CYS 195 A SG CYS 200 1_555 disulf 2.008 B B H CYS 140 A SG CYS 145 1_555 H CYS 195 A SG CYS 200 1_555 disulf 2.115 L CYS 23 B SG CYS 23 1_555 L CYS 88 B SG CYS 89 1_555 disulf 2.029 A A L CYS 134 B SG CYS 135 1_555 L CYS 194 B SG CYS 195 1_555 disulf 2.043 B B L CYS 134 B SG CYS 135 1_555 L CYS 194 B SG CYS 195 1_555 covale 1.450 one N-Glycosylation L ASN 26 B ND2 ASN 26 1_555 L NAG 302 K C1 NAG 1_555 metalc 2.936 H ASP 55 A OD1 ASP 56 1_555 H K 306 H K K 4_455 metalc 2.711 H SER 71 A O SER 72 1_555 H K 306 H K K 4_455 metalc 2.849 H ASP 207 A O ASP 212 1_555 H K 306 H K K 1_555 metalc 2.901 H ASP 207 A OD2 ASP 212 1_555 H K 306 H K K 1_555 metalc 3.435 H K 306 H K K 1_555 H HOH 409 L O HOH 4_555 metalc 2.917 H K 306 H K K 1_555 H HOH 442 L O HOH 1_555 metalc 3.012 H K 306 H K K 1_555 H HOH 491 L O HOH 1_555 metalc 3.038 H K 306 H K K 1_555 H HOH 513 L O HOH 4_555 IMMUNE SYSTEM Afamin antibody, Fab fragment, IgG1-kappa, light chain glycosilation, immune system H PHE 146 A PHE 151 1 H PRO 147 A PRO 152 -8.33 H GLU 148 A GLU 153 1 H PRO 149 A PRO 154 -0.48 H TRP 188 A TRP 193 1 H PRO 189 A PRO 194 7.65 L THR 7 B THR 7 1 L PRO 8 B PRO 8 -5.90 L SER 94 B SER 95 1 L PRO 95 B PRO 96 1.07 L TYR 140 B TYR 141 1 L PRO 141 B PRO 142 2.35 5L9D PDB 1 1 5L9D 5L9D PDB 2 1 5L9D 1 215 5L9D 1 215 5L9D H 1 1 220 1 214 5L9D 1 214 5L9D L 2 1 215 4 6 4 4 4 3 4 6 4 4 4 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel H LYS 3 A LYS 3 H GLU 6 A GLU 6 H MET 18 A MET 18 H SER 25 A SER 25 H THR 77 A THR 78 H LEU 82 A LEU 83 H ALA 67 A ALA 68 H ASP 72 A ASP 73 H GLU 10 A GLU 10 H VAL 12 A VAL 12 H THR 107 A THR 112 H VAL 111 A VAL 116 H ALA 88 A ALA 92 H ASN 95 A ASN 99 H ILE 34 A ILE 34 H GLN 39 A GLN 39 H LEU 45 A LEU 45 H ASN 52 A ASN 52 H GLY 56 A GLY 57 H TYR 59 A TYR 60 H GLU 10 A GLU 10 H VAL 12 A VAL 12 H THR 107 A THR 112 H VAL 111 A VAL 116 H ALA 88 A ALA 92 H ASN 95 A ASN 99 H LEU 100 A LEU 105 H TRP 103 A TRP 108 A H SER 120 A SER 125 H LEU 124 A LEU 129 H MET 135 A MET 140 H TYR 145 A TYR 150 H LEU 174 A LEU 179 H PRO 184 A PRO 189 H VAL 163 A VAL 168 H THR 165 A THR 170 H SER 120 A SER 125 H LEU 124 A LEU 129 H MET 135 A MET 140 H TYR 145 A TYR 150 H LEU 174 A LEU 179 H PRO 184 A PRO 189 H VAL 169 A VAL 174 H GLN 171 A GLN 176 H THR 151 A THR 156 H ASN 155 A ASN 160 H THR 194 A THR 199 H HIS 199 A HIS 204 H THR 204 A THR 209 H LYS 209 A LYS 214 L LEU 4 B LEU 4 L THR 7 B THR 7 L VAL 19 B VAL 19 L ALA 25 B ALA 25 L SER 70 B SER 71 L LEU 75 B LEU 76 L PHE 62 B PHE 63 L SER 67 B SER 68 L ILE 10 B ILE 10 L ALA 13 B ALA 13 L THR 102 B THR 103 L MET 106 B MET 107 L ALA 84 B ALA 85 L GLN 90 B GLN 91 L PHE 33 B PHE 34 L GLN 38 B GLN 39 L LYS 45 B LYS 46 L TYR 49 B TYR 50 L ASN 53 B ASN 54 L LEU 54 B LEU 55 L ILE 10 B ILE 10 L ALA 13 B ALA 13 L THR 102 B THR 103 L MET 106 B MET 107 L ALA 84 B ALA 85 L GLN 90 B GLN 91 L THR 97 B THR 98 L PHE 98 B PHE 99 L THR 114 B THR 115 L PHE 118 B PHE 119 L GLY 129 B GLY 130 L PHE 139 B PHE 140 L TYR 173 B TYR 174 L THR 182 B THR 183 L VAL 159 B VAL 160 L TRP 163 B TRP 164 L SER 153 B SER 154 L ARG 155 B ARG 156 L ASN 145 B ASN 146 L ILE 150 B ILE 151 L SER 191 B SER 192 L THR 197 B THR 198 L ILE 205 B ILE 206 L ASN 210 B ASN 211 19 P 21 21 21