0.017652 0.010191 0.000000 0.000000 0.020383 0.000000 0.000000 0.000000 0.009608 0.000000 0.000000 0.000000 Kessler, D. Gollner, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.000 90.000 120.000 56.651 56.651 104.085 C22 H25 Cl2 N3 O 418.359 (3~{S},3'~{S},4'~{S})-4'-azanyl-6-chloranyl-3'-(3-chlorophenyl)-1'-(2,2-dimethylpropyl)spiro[1~{H}-indole-3,2'-pyrrolidine]-2-one non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C N 7 S C N 8 N C N 9 N C N 10 N C N 11 N C N 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C N 17 N CL N 18 S C N 19 N N N 20 N C N 21 N N N 22 S C Y 23 N C N 24 N CL Y 25 N C N 26 N N N 27 N C N 28 N O N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N N N 55 S C N 56 N C N 57 N O N 58 N C N 59 N O N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N N N 68 S C N 69 N C N 70 N O N 71 N C N 72 N C N 73 N C N 74 N N N 75 N C N 76 N N N 77 N N N 78 N O N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N O N 101 N N N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N O N 118 N O N 119 N O N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 R C N 129 N C N 130 N O N 131 N C N 132 N S N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 N C N 146 N C N 147 N C N 148 N O N 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 N C N 166 N C N 167 N C N 168 N O N 169 N O N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 N C N 182 N C N 183 N O N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N N N 191 S C N 192 N C N 193 N O N 194 N C Y 195 N C Y 196 N N Y 197 N C Y 198 N C Y 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N O N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 S C N 219 N C N 220 N C N 221 N C N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C N 241 N C N 242 N C N 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C N 263 N C N 264 N C N 265 N C N 266 N N N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C N 288 N C N 289 N S N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N N N 304 S C N 305 N C N 306 N O N 307 N C Y 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N N N 344 S C N 345 N C N 346 N O N 347 N C N 348 N O N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N S N 358 N O N 359 N O N 360 N O N 361 N O N 362 N N N 363 S C N 364 N C N 365 N O N 366 R C N 367 N O N 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N C N 390 N O N 391 N O N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N N N 404 S C N 405 N C N 406 N O N 407 N C N 408 N C N 409 N C N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 1 N sing Y 2 N doub Y 3 N sing Y 4 N sing N 5 N sing Y 6 N doub N 7 N sing Y 8 N doub N 9 N sing N 10 N sing Y 11 N sing Y 12 N doub Y 13 N sing Y 14 N sing N 15 N sing N 16 N sing N 17 N sing Y 18 N doub N 19 N sing N 20 N sing N 21 N sing N 22 N sing Y 23 N doub N 24 N sing N 25 N sing Y 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing Y 196 N sing Y 197 N doub Y 198 N doub N 199 N sing Y 200 N sing N 201 N sing Y 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub N 309 N sing Y 310 N doub N 311 N sing Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing Y 377 N doub Y 378 N sing Y 379 N sing N 380 N sing Y 381 N doub N 382 N sing Y 383 N doub N 384 N sing Y 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing US J. Med. Chem. JMCMAR 0151 1520-4804 59 10147 10162 10.1021/acs.jmedchem.6b00900 27775892 Discovery of Novel Spiro[3H-indole-3,2'-pyrrolidin]-2(1H)-one Compounds as Chemically Stable and Orally Active Inhibitors of the MDM2-p53 Interaction. 2016 10.2210/pdb5lav/pdb pdb_00005lav 100.0 1 PIXEL 2013-02-10 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 1.00003 1.0 X06SA SLS 1.00003 SYNCHROTRON SLS BEAMLINE X06SA 10883.793 E3 ubiquitin-protein ligase Mdm2 6.3.2.- 1 man polymer 418.359 (3~{S},3'~{S},4'~{S})-4'-azanyl-6-chloranyl-3'-(3-chlorophenyl)-1'-(2,2-dimethylpropyl)spiro[1~{H}-indole-3,2'-pyrrolidine]-2-one 1 syn non-polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 32 nat water Double minute 2 protein,Hdm2,Oncoprotein Mdm2,p53-binding protein Mdm2 no no IPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK IYTMIYRNLVVVN IPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK IYTMIYRNLVVVN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 93 MDM2 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pGEX4T2 1 2.300 46.650 VAPOR DIFFUSION, HANGING DROP 4.5 RESERVOIR SOLUTION : NULL 277 pdbx_unobs_or_zero_occ_atoms reflns reflns_shell struct chem_comp_atom chem_comp_bond database_2 pdbx_unobs_or_zero_occ_atoms repository Initial release Database references Advisory Data collection Structure summary Advisory Data collection Database references 1 0 2016-11-02 1 1 2016-12-21 1 2 2018-04-25 1 3 2024-05-08 _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs _struct.title _database_2.pdbx_DOI _database_2.pdbx_database_accession N PDBE Y PDBE 2016-06-15 REL REL 6SK (3~{S},3'~{S},4'~{S})-4'-azanyl-6-chloranyl-3'-(3-chlorophenyl)-1'-(2,2-dimethylpropyl)spiro[1~{H}-indole-3,2'-pyrrolidine]-2-one SO4 SULFATE ION HOH water INX 1 2 6SK 6SK 201 A SO4 1 3 SO4 SO4 202 A HOH 13 4 HOH HOH 301 A HOH 5 4 HOH HOH 302 A HOH 4 4 HOH HOH 303 A HOH 32 4 HOH HOH 304 A HOH 17 4 HOH HOH 305 A HOH 2 4 HOH HOH 306 A HOH 20 4 HOH HOH 307 A HOH 3 4 HOH HOH 308 A HOH 21 4 HOH HOH 309 A HOH 31 4 HOH HOH 310 A HOH 18 4 HOH HOH 311 A HOH 24 4 HOH HOH 312 A HOH 9 4 HOH HOH 313 A HOH 16 4 HOH HOH 314 A HOH 8 4 HOH HOH 315 A HOH 12 4 HOH HOH 316 A HOH 11 4 HOH HOH 317 A HOH 1 4 HOH HOH 318 A HOH 22 4 HOH HOH 319 A HOH 23 4 HOH HOH 320 A HOH 15 4 HOH HOH 321 A HOH 14 4 HOH HOH 322 A HOH 29 4 HOH HOH 323 A HOH 7 4 HOH HOH 324 A HOH 19 4 HOH HOH 325 A HOH 30 4 HOH HOH 326 A HOH 27 4 HOH HOH 327 A HOH 26 4 HOH HOH 328 A HOH 25 4 HOH HOH 329 A HOH 28 4 HOH HOH 330 A HOH 6 4 HOH HOH 331 A HOH 10 4 HOH HOH 332 A ILE 19 n 1 ILE 19 A PRO 20 n 2 PRO 20 A ALA 21 n 3 ALA 21 A SER 22 n 4 SER 22 A GLU 23 n 5 GLU 23 A GLN 24 n 6 GLN 24 A GLU 25 n 7 GLU 25 A THR 26 n 8 THR 26 A LEU 27 n 9 LEU 27 A VAL 28 n 10 VAL 28 A ARG 29 n 11 ARG 29 A PRO 30 n 12 PRO 30 A LYS 31 n 13 LYS 31 A PRO 32 n 14 PRO 32 A LEU 33 n 15 LEU 33 A LEU 34 n 16 LEU 34 A LEU 35 n 17 LEU 35 A LYS 36 n 18 LYS 36 A LEU 37 n 19 LEU 37 A LEU 38 n 20 LEU 38 A LYS 39 n 21 LYS 39 A SER 40 n 22 SER 40 A VAL 41 n 23 VAL 41 A GLY 42 n 24 GLY 42 A ALA 43 n 25 ALA 43 A GLN 44 n 26 GLN 44 A LYS 45 n 27 LYS 45 A ASP 46 n 28 ASP 46 A THR 47 n 29 THR 47 A TYR 48 n 30 TYR 48 A THR 49 n 31 THR 49 A MET 50 n 32 MET 50 A LYS 51 n 33 LYS 51 A GLU 52 n 34 GLU 52 A VAL 53 n 35 VAL 53 A LEU 54 n 36 LEU 54 A PHE 55 n 37 PHE 55 A TYR 56 n 38 TYR 56 A LEU 57 n 39 LEU 57 A GLY 58 n 40 GLY 58 A GLN 59 n 41 GLN 59 A TYR 60 n 42 TYR 60 A ILE 61 n 43 ILE 61 A MET 62 n 44 MET 62 A THR 63 n 45 THR 63 A LYS 64 n 46 LYS 64 A ARG 65 n 47 ARG 65 A LEU 66 n 48 LEU 66 A TYR 67 n 49 TYR 67 A ASP 68 n 50 ASP 68 A GLU 69 n 51 GLU 69 A LYS 70 n 52 LYS 70 A GLN 71 n 53 GLN 71 A GLN 72 n 54 GLN 72 A HIS 73 n 55 HIS 73 A ILE 74 n 56 ILE 74 A VAL 75 n 57 VAL 75 A TYR 76 n 58 TYR 76 A CYS 77 n 59 CYS 77 A SER 78 n 60 SER 78 A ASN 79 n 61 ASN 79 A ASP 80 n 62 ASP 80 A LEU 81 n 63 LEU 81 A LEU 82 n 64 LEU 82 A GLY 83 n 65 GLY 83 A ASP 84 n 66 ASP 84 A LEU 85 n 67 LEU 85 A PHE 86 n 68 PHE 86 A GLY 87 n 69 GLY 87 A VAL 88 n 70 VAL 88 A PRO 89 n 71 PRO 89 A SER 90 n 72 SER 90 A PHE 91 n 73 PHE 91 A SER 92 n 74 SER 92 A VAL 93 n 75 VAL 93 A LYS 94 n 76 LYS 94 A GLU 95 n 77 GLU 95 A HIS 96 n 78 HIS 96 A ARG 97 n 79 ARG 97 A LYS 98 n 80 LYS 98 A ILE 99 n 81 ILE 99 A TYR 100 n 82 TYR 100 A THR 101 n 83 THR 101 A MET 102 n 84 MET 102 A ILE 103 n 85 ILE 103 A TYR 104 n 86 TYR 104 A ARG 105 n 87 ARG 105 A ASN 106 n 88 ASN 106 A LEU 107 n 89 LEU 107 A VAL 108 n 90 VAL 108 A VAL 109 n 91 VAL 109 A VAL 110 n 92 VAL 110 A ASN 111 n 93 ASN 111 A author_and_software_defined_assembly PISA 1 monomeric 110 -8 6070 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 48 A O TYR 30 A N VAL 28 A N VAL 10 A N LEU 27 A N LEU 9 A O VAL 110 A O VAL 92 A N VAL 75 A N VAL 57 A O PHE 91 A O PHE 73 1 A CG LYS 70 A CG LYS 52 0 Y 1 A CD LYS 70 A CD LYS 52 0 Y 1 A CE LYS 70 A CE LYS 52 0 Y 1 A NZ LYS 70 A NZ LYS 52 0 Y 1 A CD GLN 72 A CD GLN 54 0 Y 1 A OE1 GLN 72 A OE1 GLN 54 0 Y 1 A NE2 GLN 72 A NE2 GLN 54 0 Y 1 A CG LYS 94 A CG LYS 76 0 Y 1 A CD LYS 94 A CD LYS 76 0 Y 1 A CE LYS 94 A CE LYS 76 0 Y 1 A NZ LYS 94 A NZ LYS 76 0 Y 1 A CZ ARG 97 A CZ ARG 79 0 Y 1 A NH1 ARG 97 A NH1 ARG 79 0 Y 1 A NH2 ARG 97 A NH2 ARG 79 0 Y 1 A CG LYS 98 A CG LYS 80 0 Y 1 A CD LYS 98 A CD LYS 80 0 Y 1 A CE LYS 98 A CE LYS 80 0 Y 1 A NZ LYS 98 A NZ LYS 80 0 Y 1 A ASN 79 -117.40 53.17 62.010 17.9100 9.060 -1.0300 -0.5100 0.0000 -1.0300 0.0000 1.5400 0.9450 0.9310 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2733 0.2415 0.2445 1.7300 49.0600 1065 9857 9.8000 99.9900 6.8800 0.1130 RANDOM 1 THROUGHOUT 0.000 MOLECULAR REPLACEMENT 0.1530 0.1410 0.8000 0.8000 1.4000 NONE 1.7300 49.0600 32 830 35.62 43.42 33 0 765 93 0.010 0.022 810 0.002 0.020 540 1.245 2.038 1106 1.028 3.000 1317 5.677 5.000 94 42.274 24.063 32 13.992 15.000 140 5.208 15.000 3 0.061 0.200 125 0.004 0.021 862 0.001 0.020 159 1.819 2.000 472 0.455 2.000 187 2.547 3.000 768 3.589 4.000 338 5.236 6.000 338 0.3770 0.3490 1.7750 91 700 791 20 100.0000 1.730 49.060 5LAV 10925 0.000 0.043 1 40.83 22.900 100.000 0.428 1.730 1.980 1 23.300 100.000 refinement REFMAC 5.5.0109 data extraction PDB_EXTRACT 3.20 data reduction XDS data scaling XSCALE phasing REFMAC N Novel Spiro[3H-indole-3,2 -pyrrolidin]-2(1H)-one Inhibitors of the MDM2-p53 Interaction: HDM2 (MDM2) in complex with compound 6b 1 N N 2 N N 3 N N 4 N N A PRO 20 A PRO 2 HELX_P A GLU 25 A GLU 7 5 AA1 6 A LYS 31 A LYS 13 HELX_P A SER 40 A SER 22 1 AA2 10 A MET 50 A MET 32 HELX_P A LYS 64 A LYS 46 1 AA3 15 A ASP 80 A ASP 62 HELX_P A GLY 87 A GLY 69 1 AA4 8 A GLU 95 A GLU 77 HELX_P A ARG 105 A ARG 87 1 AA5 11 LIGASE VIENNA, PPI, MDM2, HDM2, BI, Ligase MDM2_HUMAN UNP 1 19 Q00987 IPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRK IYTMIYRNLVVVN 19 111 5LAV 19 111 Q00987 A 1 1 93 3 2 anti-parallel anti-parallel anti-parallel A TYR 48 A TYR 30 A THR 49 A THR 31 A LEU 27 A LEU 9 A PRO 30 A PRO 12 A LEU 107 A LEU 89 A VAL 110 A VAL 92 A ILE 74 A ILE 56 A TYR 76 A TYR 58 A SER 90 A SER 72 A SER 92 A SER 74 binding site for residue 6SK A 201 A 6SK 201 Software 8 binding site for residue SO4 A 202 A SO4 202 Software 5 A LEU 54 A LEU 36 8 1_555 A MET 62 A MET 44 8 1_555 A PHE 86 A PHE 68 8 1_555 A VAL 93 A VAL 75 8 1_555 A HIS 96 A HIS 78 8 1_555 A TYR 100 A TYR 82 8 1_555 A HOH 305 D HOH 8 1_555 A HOH 309 D HOH 8 1_555 A PRO 20 A PRO 2 5 1_555 A ALA 21 A ALA 3 5 1_555 A LYS 51 A LYS 33 5 5_554 A HOH 302 D HOH 5 5_554 A HOH 303 D HOH 5 1_555 178 P 61 2 2