0.030204 0.000000 0.000000 0.000000 0.017844 0.000000 0.000000 0.000000 0.016520 0.00000 0.00000 0.00000 Zhang, R. Nifantiev, N.E. Krylov, V. Luetteke, T. Scheidig, A.J. Siebert, H.-C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 33.108 56.040 60.531 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O6 180.156 alpha-D-galactopyranose alpha-D-galactose; D-galactose; galactose; ALPHA D-GALACTOSE D-saccharide, alpha linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H12 O6 180.156 beta-D-galactofuranose beta-D-galactose; D-galactose; galactose D-saccharide, beta linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H18 O6 222.236 n propyl beta-D-galactofuranoside D-saccharide C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CL N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 S C N 90 R C N 91 S C N 92 R C N 93 R C N 94 N C N 95 N O N 96 N O N 97 N O N 98 N O N 99 N O N 100 N O N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 S C N 115 N C N 116 N O N 117 N C N 118 N C N 119 N C N 120 N O N 121 N N N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N N N 134 S C N 135 N C N 136 N O N 137 N C N 138 N C N 139 N C N 140 N O N 141 N O N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N N N 153 N C N 154 N C N 155 N O N 156 N O N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N C N 163 S C N 164 S C N 165 S C N 166 R C N 167 N O N 168 N O N 169 N O N 170 N O N 171 R C N 172 N O N 173 N O N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C Y 191 N C Y 192 N N Y 193 N C Y 194 N C Y 195 N N N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N O N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 S C N 215 N C N 216 N C N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N C N 262 N N N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N N N 280 S C N 281 N C N 282 N O N 283 N C N 284 N C N 285 N S N 286 N C N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N NA N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C Y 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 R C N 359 N O N 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N N Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C N 385 N O N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N O N 399 R C N 400 R C N 401 N O N 402 R C N 403 N O N 404 N O N 405 S C N 406 R C N 407 N O N 408 N C N 409 N O N 410 N C N 411 N C N 412 N C N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 N C Y 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C N 442 N O N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C N 460 N C N 461 N C N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing Y 188 N sing Y 189 N doub Y 190 N doub N 191 N sing Y 192 N sing N 193 N sing Y 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing Y 296 N doub Y 297 N sing Y 298 N sing N 299 N sing Y 300 N doub N 301 N sing Y 302 N doub N 303 N sing Y 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N doub N 361 N sing N 362 N sing N 363 N sing N 364 N sing Y 365 N doub Y 366 N sing Y 367 N sing N 368 N sing Y 369 N doub Y 370 N sing Y 371 N sing N 372 N sing Y 373 N sing Y 374 N doub N 375 N sing Y 376 N doub N 377 N sing Y 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing Y 426 N doub Y 427 N sing Y 428 N sing N 429 N sing Y 430 N doub N 431 N sing Y 432 N doub N 433 N sing Y 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing UK Q. Rev. Biophys. 1469-8994 50 e9 e9 10.1017/S0033583517000075 29233221 Lysozyme's lectin-like characteristics facilitates its immune defense function. 2017 10.2210/pdb5lsh/pdb pdb_00005lsh 100 1 PIXEL 2015-10-24 DECTRIS PILATUS3 6M SINGLE WAVELENGTH M x-ray 1 0.9762 1.0 P13 (MX1) PETRA III, EMBL c/o DESY 0.9762 SYNCHROTRON PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) 14720.693 Lysozyme C 3.2.1.17 1 man polymer 708.658 alpha-D-galactopyranose-(1-3)-beta-D-galactofuranose-(1-3)-alpha-D-galactopyranose-(1-3)-propyl beta-D-galactofuranoside 1 man branched 35.453 CHLORIDE ION 3 syn non-polymer 22.990 SODIUM ION 1 syn non-polymer 18.015 water 160 nat water 1,4-beta-N-acetylmuramidase C no no KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLS CSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLS CSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 130 LYZ, LZM 9606 Homo sapiens 10090 Mus musculus Biological sequence 1 1.91 35.51 VAPOR DIFFUSION, HANGING DROP 0.8 M NaCl, 25 mM NaOAc, pH 5.4 291 citation citation_author atom_site chem_comp entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_conn_angle struct_asym struct_conn struct_conn_type struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Database references Atomic model Data collection Derived calculations Non-polymer description Structure summary Data collection Database references Refinement description Structure summary 1 0 2017-06-21 1 1 2017-12-27 2 0 2020-07-29 2 1 2024-01-17 _citation.country _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_PubMed _citation.title _citation_author.name _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_alt_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.occupancy _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_asym.entity_id _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession A KTS 135 n B TVG 1 A KTS 135 n B GLA 2 A KTS 135 n B GZL 3 A KTS 135 n B GLA 4 DGalpa a-D-galactopyranose a-D-Galp Gal DGalfb b-D-galactofuranose b-D-Galf Gal N PDBE Y PDBE 2016-08-26 REL REL oligosaccharide WURCS=2.0/3,4,3/[a2112h-1b_1-4_1*OCCC][a2112h-1a_1-5][a2112h-1b_1-4]/1-2-3-2/a3-b1_b3-c1_c3-d1 2 PDB2Glycan 1.1.0 WURCS [][propyl]{[(1+1)][b-D-Galf]{[(3+1)][a-D-Galp]{[(3+1)][b-D-Galf]{[(3+1)][a-D-Galp]{}}}}} 2 PDB-CARE LINUCS C1 O3 GLA TVG 2 1 2 O1 HO3 sing C1 O3 GZL GLA 3 2 2 O1 HO3 sing C1 O3 GLA GZL 4 3 2 O1 HO3 sing n n n n CL CHLORIDE ION NA SODIUM ION HOH water 1REX PDB experimental model CL 131 3 CL CL 201 A CL 132 3 CL CL 202 A CL 133 3 CL CL 203 A NA 134 4 NA NA 204 A HOH 275 5 HOH HOH 301 A HOH 207 5 HOH HOH 302 A HOH 294 5 HOH HOH 303 A HOH 193 5 HOH HOH 304 A HOH 138 5 HOH HOH 305 A HOH 196 5 HOH HOH 306 A HOH 169 5 HOH HOH 307 A HOH 199 5 HOH HOH 308 A HOH 224 5 HOH HOH 309 A HOH 291 5 HOH HOH 310 A HOH 285 5 HOH HOH 311 A HOH 159 5 HOH HOH 312 A HOH 160 5 HOH HOH 313 A HOH 258 5 HOH HOH 314 A HOH 205 5 HOH HOH 315 A HOH 172 5 HOH HOH 316 A HOH 283 5 HOH HOH 317 A HOH 223 5 HOH HOH 318 A HOH 279 5 HOH HOH 319 A HOH 200 5 HOH HOH 320 A HOH 147 5 HOH HOH 321 A HOH 150 5 HOH HOH 322 A HOH 142 5 HOH HOH 323 A HOH 164 5 HOH HOH 324 A HOH 179 5 HOH HOH 325 A HOH 232 5 HOH HOH 326 A HOH 270 5 HOH HOH 327 A HOH 276 5 HOH HOH 328 A HOH 176 5 HOH HOH 329 A HOH 203 5 HOH HOH 330 A HOH 139 5 HOH HOH 331 A HOH 211 5 HOH HOH 332 A HOH 231 5 HOH HOH 333 A HOH 189 5 HOH HOH 334 A HOH 234 5 HOH HOH 335 A HOH 253 5 HOH HOH 336 A HOH 192 5 HOH HOH 337 A HOH 154 5 HOH HOH 338 A HOH 227 5 HOH HOH 339 A HOH 255 5 HOH HOH 340 A HOH 204 5 HOH HOH 341 A HOH 217 5 HOH HOH 342 A HOH 155 5 HOH HOH 343 A HOH 171 5 HOH HOH 344 A HOH 163 5 HOH HOH 345 A HOH 222 5 HOH HOH 346 A HOH 252 5 HOH HOH 347 A HOH 288 5 HOH HOH 348 A HOH 161 5 HOH HOH 349 A HOH 195 5 HOH HOH 350 A HOH 145 5 HOH HOH 351 A HOH 182 5 HOH HOH 352 A HOH 144 5 HOH HOH 353 A HOH 174 5 HOH HOH 354 A HOH 266 5 HOH HOH 355 A HOH 151 5 HOH HOH 356 A HOH 168 5 HOH HOH 357 A HOH 156 5 HOH HOH 358 A HOH 241 5 HOH HOH 359 A HOH 190 5 HOH HOH 360 A HOH 249 5 HOH HOH 361 A HOH 197 5 HOH HOH 362 A HOH 236 5 HOH HOH 363 A HOH 264 5 HOH HOH 364 A HOH 208 5 HOH HOH 365 A HOH 281 5 HOH HOH 366 A HOH 244 5 HOH HOH 367 A HOH 184 5 HOH HOH 368 A HOH 248 5 HOH HOH 369 A HOH 149 5 HOH HOH 370 A HOH 221 5 HOH HOH 371 A HOH 158 5 HOH HOH 372 A HOH 175 5 HOH HOH 373 A HOH 140 5 HOH HOH 374 A HOH 218 5 HOH HOH 375 A HOH 286 5 HOH HOH 376 A HOH 212 5 HOH HOH 377 A HOH 263 5 HOH HOH 378 A HOH 238 5 HOH HOH 379 A HOH 143 5 HOH HOH 380 A HOH 187 5 HOH HOH 381 A HOH 198 5 HOH HOH 382 A HOH 274 5 HOH HOH 383 A HOH 256 5 HOH HOH 384 A HOH 167 5 HOH HOH 385 A HOH 153 5 HOH HOH 386 A HOH 177 5 HOH HOH 387 A HOH 230 5 HOH HOH 388 A HOH 180 5 HOH HOH 389 A HOH 243 5 HOH HOH 390 A HOH 137 5 HOH HOH 391 A HOH 247 5 HOH HOH 392 A HOH 157 5 HOH HOH 393 A HOH 268 5 HOH HOH 394 A HOH 183 5 HOH HOH 395 A HOH 214 5 HOH HOH 396 A HOH 292 5 HOH HOH 397 A HOH 186 5 HOH HOH 398 A HOH 136 5 HOH HOH 399 A HOH 202 5 HOH HOH 400 A HOH 148 5 HOH HOH 401 A HOH 265 5 HOH HOH 402 A HOH 194 5 HOH HOH 403 A HOH 191 5 HOH HOH 404 A HOH 262 5 HOH HOH 405 A HOH 206 5 HOH HOH 406 A HOH 240 5 HOH HOH 407 A HOH 146 5 HOH HOH 408 A HOH 178 5 HOH HOH 409 A HOH 215 5 HOH HOH 410 A HOH 201 5 HOH HOH 411 A HOH 267 5 HOH HOH 412 A HOH 209 5 HOH HOH 413 A HOH 229 5 HOH HOH 414 A HOH 173 5 HOH HOH 415 A HOH 185 5 HOH HOH 416 A HOH 166 5 HOH HOH 417 A HOH 233 5 HOH HOH 418 A HOH 219 5 HOH HOH 419 A HOH 293 5 HOH HOH 420 A HOH 235 5 HOH HOH 421 A HOH 165 5 HOH HOH 422 A HOH 220 5 HOH HOH 423 A HOH 246 5 HOH HOH 424 A HOH 290 5 HOH HOH 425 A HOH 152 5 HOH HOH 426 A HOH 245 5 HOH HOH 427 A HOH 216 5 HOH HOH 428 A HOH 181 5 HOH HOH 429 A HOH 213 5 HOH HOH 430 A HOH 271 5 HOH HOH 431 A HOH 162 5 HOH HOH 432 A HOH 289 5 HOH HOH 433 A HOH 141 5 HOH HOH 434 A HOH 269 5 HOH HOH 435 A HOH 287 5 HOH HOH 436 A HOH 284 5 HOH HOH 437 A HOH 188 5 HOH HOH 438 A HOH 260 5 HOH HOH 439 A HOH 237 5 HOH HOH 440 A HOH 225 5 HOH HOH 441 A HOH 278 5 HOH HOH 442 A HOH 210 5 HOH HOH 443 A HOH 239 5 HOH HOH 444 A HOH 257 5 HOH HOH 445 A HOH 277 5 HOH HOH 446 A HOH 254 5 HOH HOH 447 A HOH 170 5 HOH HOH 448 A HOH 261 5 HOH HOH 449 A HOH 251 5 HOH HOH 450 A HOH 273 5 HOH HOH 451 A HOH 295 5 HOH HOH 452 A HOH 226 5 HOH HOH 453 A HOH 242 5 HOH HOH 454 A HOH 272 5 HOH HOH 455 A HOH 259 5 HOH HOH 456 A HOH 250 5 HOH HOH 457 A HOH 228 5 HOH HOH 458 A HOH 282 5 HOH HOH 459 A HOH 280 5 HOH HOH 460 A LYS 1 n 1 LYS 1 A VAL 2 n 2 VAL 2 A PHE 3 n 3 PHE 3 A GLU 4 n 4 GLU 4 A ARG 5 n 5 ARG 5 A CYS 6 n 6 CYS 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A ARG 10 n 10 ARG 10 A THR 11 n 11 THR 11 A LEU 12 n 12 LEU 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A LEU 15 n 15 LEU 15 A GLY 16 n 16 GLY 16 A MET 17 n 17 MET 17 A ASP 18 n 18 ASP 18 A GLY 19 n 19 GLY 19 A TYR 20 n 20 TYR 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A ILE 23 n 23 ILE 23 A SER 24 n 24 SER 24 A LEU 25 n 25 LEU 25 A ALA 26 n 26 ALA 26 A ASN 27 n 27 ASN 27 A TRP 28 n 28 TRP 28 A MET 29 n 29 MET 29 A CYS 30 n 30 CYS 30 A LEU 31 n 31 LEU 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A TRP 34 n 34 TRP 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A GLY 37 n 37 GLY 37 A TYR 38 n 38 TYR 38 A ASN 39 n 39 ASN 39 A THR 40 n 40 THR 40 A ARG 41 n 41 ARG 41 A ALA 42 n 42 ALA 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A TYR 45 n 45 TYR 45 A ASN 46 n 46 ASN 46 A ALA 47 n 47 ALA 47 A GLY 48 n 48 GLY 48 A ASP 49 n 49 ASP 49 A ARG 50 n 50 ARG 50 A SER 51 n 51 SER 51 A THR 52 n 52 THR 52 A ASP 53 n 53 ASP 53 A TYR 54 n 54 TYR 54 A GLY 55 n 55 GLY 55 A ILE 56 n 56 ILE 56 A PHE 57 n 57 PHE 57 A GLN 58 n 58 GLN 58 A ILE 59 n 59 ILE 59 A ASN 60 n 60 ASN 60 A SER 61 n 61 SER 61 A ARG 62 n 62 ARG 62 A TYR 63 n 63 TYR 63 A TRP 64 n 64 TRP 64 A CYS 65 n 65 CYS 65 A ASN 66 n 66 ASN 66 A ASP 67 n 67 ASP 67 A GLY 68 n 68 GLY 68 A LYS 69 n 69 LYS 69 A THR 70 n 70 THR 70 A PRO 71 n 71 PRO 71 A GLY 72 n 72 GLY 72 A ALA 73 n 73 ALA 73 A VAL 74 n 74 VAL 74 A ASN 75 n 75 ASN 75 A ALA 76 n 76 ALA 76 A CYS 77 n 77 CYS 77 A HIS 78 n 78 HIS 78 A LEU 79 n 79 LEU 79 A SER 80 n 80 SER 80 A CYS 81 n 81 CYS 81 A SER 82 n 82 SER 82 A ALA 83 n 83 ALA 83 A LEU 84 n 84 LEU 84 A LEU 85 n 85 LEU 85 A GLN 86 n 86 GLN 86 A ASP 87 n 87 ASP 87 A ASN 88 n 88 ASN 88 A ILE 89 n 89 ILE 89 A ALA 90 n 90 ALA 90 A ASP 91 n 91 ASP 91 A ALA 92 n 92 ALA 92 A VAL 93 n 93 VAL 93 A ALA 94 n 94 ALA 94 A CYS 95 n 95 CYS 95 A ALA 96 n 96 ALA 96 A LYS 97 n 97 LYS 97 A ARG 98 n 98 ARG 98 A VAL 99 n 99 VAL 99 A VAL 100 n 100 VAL 100 A ARG 101 n 101 ARG 101 A ASP 102 n 102 ASP 102 A PRO 103 n 103 PRO 103 A GLN 104 n 104 GLN 104 A GLY 105 n 105 GLY 105 A ILE 106 n 106 ILE 106 A ARG 107 n 107 ARG 107 A ALA 108 n 108 ALA 108 A TRP 109 n 109 TRP 109 A VAL 110 n 110 VAL 110 A ALA 111 n 111 ALA 111 A TRP 112 n 112 TRP 112 A ARG 113 n 113 ARG 113 A ASN 114 n 114 ASN 114 A ARG 115 n 115 ARG 115 A CYS 116 n 116 CYS 116 A GLN 117 n 117 GLN 117 A ASN 118 n 118 ASN 118 A ARG 119 n 119 ARG 119 A ASP 120 n 120 ASP 120 A VAL 121 n 121 VAL 121 A ARG 122 n 122 ARG 122 A GLN 123 n 123 GLN 123 A TYR 124 n 124 TYR 124 A VAL 125 n 125 VAL 125 A GLN 126 n 126 GLN 126 A GLY 127 n 127 GLY 127 A CYS 128 n 128 CYS 128 A GLY 129 n 129 GLY 129 A VAL 130 n 130 VAL 130 A author_and_software_defined_assembly PISA 1 monomeric 350 -22 6930 A THR 11 A O THR 11 1_555 A NA 204 F NA NA 4_456 A GLY 127 A O GLY 127 1_555 57.2 A THR 11 A O THR 11 1_555 A NA 204 F NA NA 4_456 A HOH 448 G O HOH 4_556 58.5 A GLY 127 A O GLY 127 1_555 A NA 204 F NA NA 4_456 A HOH 448 G O HOH 4_556 8.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASN 44 A N ASN 44 A O ASP 53 A O ASP 53 A N TYR 54 A N TYR 54 A O ILE 59 A O ILE 59 1 A A O O HOH HOH 302 383 1.90 1 A A O O HOH HOH 303 339 1.93 1 A A O O HOH HOH 309 383 2.09 1 A A NE2 O GLN HOH 126 301 2.13 1 A A O O HOH HOH 309 340 2.15 1 A A OE2 O GLU HOH 35 302 2.15 B 1 A A OG1 O THR HOH 43 303 2.17 A 1 A A CD OE2 GLU GLU 4 4 0.071 0.011 1.252 1.323 N 1 A CYS 116 -132.60 -37.62 0.2032 0.1801 0.1813 1.061 30.265 2372 47421 5.00 91.68 0.13 1 FREE R-VALUE 1.35 MOLECULAR REPLACEMENT 22.07 0.90 1.11 1REX 1.061 30.265 160 1241 52 0 1029 0.013 1288 1.569 1773 27.705 544 0.105 205 0.009 220 0.3208 0.3418 1.0827 83 1579 55.00 0.3480 0.3007 1.1062 130 2479 87.00 0.2714 0.2600 1.1320 133 2528 89.00 0.2698 0.2385 1.1603 135 2560 90.00 0.2689 0.2280 1.1917 138 2625 92.00 0.2489 0.2173 1.2267 141 2670 93.00 0.2383 0.2110 1.2663 140 2664 93.00 0.2224 0.1979 1.3116 141 2673 94.00 0.2198 0.1921 1.3641 143 2694 94.00 0.1949 0.1866 1.4262 144 2735 95.00 0.1955 0.1741 1.5014 142 2758 95.00 0.2077 0.1697 1.5954 145 2742 95.00 0.2237 0.1675 1.7186 146 2778 96.00 0.1879 0.1823 1.8915 146 2784 96.00 0.1982 0.1691 2.1652 151 2831 96.00 0.2038 0.1711 2.7276 152 2873 97.00 0.1694 0.1576 30.2778 162 3076 99.00 9.8 1.061 30.265 5LSH 47721 1 0.072 1 17.06 11.9 92 1.061 1.099 1.52 0.633 1 9.8 69 refinement PHENIX (1.10.1_2155) data reduction XDS data scaling XSCALE phasing MOLREP N human lysozyme in complex with a tetrasaccharide fragment of the O-chain of LPS from Klebsiella pneumoniae 1 N N 2 N N 3 N N 3 N N 3 N N 4 N N 5 N N A GLU 4 A GLU 4 HELX_P A LEU 15 A LEU 15 1 AA1 12 A GLY 19 A GLY 19 HELX_P A ILE 23 A ILE 23 5 AA2 5 A SER 24 A SER 24 HELX_P A GLY 37 A GLY 37 1 AA3 14 A SER 80 A SER 80 HELX_P A GLN 86 A GLN 86 5 AA4 7 A ILE 89 A ILE 89 HELX_P A ARG 101 A ARG 101 1 AA5 13 A GLN 104 A GLN 104 HELX_P A ALA 108 A ALA 108 5 AA6 5 A TRP 109 A TRP 109 HELX_P A CYS 116 A CYS 116 1 AA7 8 A VAL 121 A VAL 121 HELX_P A VAL 125 A VAL 125 5 AA8 5 disulf 2.088 A CYS 6 A SG CYS 6 1_555 A CYS 128 A SG CYS 128 1_555 disulf 2.086 A CYS 30 A SG CYS 30 1_555 A CYS 116 A SG CYS 116 1_555 disulf 2.048 A CYS 65 A SG CYS 65 1_555 A CYS 81 A SG CYS 81 1_555 disulf 2.045 A CYS 77 A SG CYS 77 1_555 A CYS 95 A SG CYS 95 1_555 covale 1.436 both A A sing B TVG 1 B O3 TVG 1_555 B GLA 2 B C1 GLA 1_555 covale 1.426 both B B sing B TVG 1 B O3 TVG 1_555 B GLA 2 B C1 GLA 1_555 covale 1.418 both A A sing B GLA 2 B O3 GLA 1_555 B GZL 3 B C1 GZL 1_555 covale 1.416 both B B sing B GLA 2 B O3 GLA 1_555 B GZL 3 B C1 GZL 1_555 covale 1.445 both A A sing B GZL 3 B O3 GZL 1_555 B GLA 4 B C1 GLA 1_555 covale 1.433 both B B sing B GZL 3 B O3 GZL 1_555 B GLA 4 B C1 GLA 1_555 metalc 2.945 A THR 11 A O THR 11 1_555 A NA 204 F NA NA 4_456 metalc 2.692 A GLY 127 A O GLY 127 1_555 A NA 204 F NA NA 1_555 metalc 2.795 A NA 204 F NA NA 1_555 A HOH 448 G O HOH 4_556 SUGAR BINDING PROTEIN lectin, complex, LPS, O-chain, sugar binding protein LYSC_HUMAN UNP 1 19 P61626 KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLS CSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV 19 148 5LSH 1 130 P61626 A 1 1 130 3 anti-parallel anti-parallel A THR 43 A THR 43 A TYR 45 A TYR 45 A THR 52 A THR 52 A TYR 54 A TYR 54 A ILE 59 A ILE 59 A ASN 60 A ASN 60 19 P 21 21 21