0.017976
0.010378
0.000000
0.000000
0.020757
0.000000
0.000000
0.000000
0.006931
0.00000
0.00000
0.00000
Klima, M.
Boura, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
55.630
55.630
144.270
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-glucopyranose
beta-D-glucose; D-glucose; glucose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
R
C
N
78
N
C
N
79
R
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
R
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
S
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
S
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
C
N
118
N
C
N
119
N
O
N
120
N
N
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
N
N
133
S
C
N
134
N
C
N
135
N
O
N
136
N
C
N
137
N
C
N
138
N
C
N
139
N
O
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
N
C
N
153
N
C
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
N
C
Y
166
N
C
Y
167
N
N
Y
168
N
C
Y
169
N
C
Y
170
N
N
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
S
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
N
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
S
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
S
C
N
273
N
C
N
274
N
O
N
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
O
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
R
C
N
330
N
O
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
N
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
Y
164
N
sing
Y
165
N
doub
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
N
169
N
sing
Y
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
Y
270
N
doub
Y
271
N
sing
Y
272
N
sing
N
273
N
sing
Y
274
N
doub
N
275
N
sing
Y
276
N
doub
N
277
N
sing
Y
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
doub
Y
340
N
sing
Y
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
sing
Y
348
N
doub
N
349
N
sing
Y
350
N
doub
N
351
N
sing
Y
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
doub
N
374
N
sing
Y
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
UK
Structure
STRUE6
2005
1878-4186
25
219
230
10.1016/j.str.2016.11.021
28065508
Kobuviral Non-structural 3A Proteins Act as Molecular Harnesses to Hijack the Host ACBD3 Protein.
2017
10.2210/pdb5lz6/pdb
pdb_00005lz6
100
1
PIXEL
2016-03-17
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.979810
1.0
14.1
BESSY
0.979810
SYNCHROTRON
BESSY BEAMLINE 14.1
19261.217
Golgi resident protein GCP60
1
man
polymer
4182.599
3A
1
man
polymer
180.156
beta-D-glucopyranose
1
man
non-polymer
Acyl-CoA-binding domain-containing protein 3,Golgi complex-associated protein 1,GOCAP1,Golgi phosphoprotein 1,GOLPH1,PBR- and PKA-associated protein 7,Peripheral benzodiazepine receptor-associated protein PAP7
no
no
MESLPVIAAPSMWTRPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFWEFATDNYDIGFGVYFEWTDSPNTA
VSVHVSESSDDDEEEEENIGCEEKAKKNANKPLLDEIVPVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRSKSVYY
RVYYTR
MESLPVIAAPSMWTRPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFWEFATDNYDIGFGVYFEWTDSPNTA
VSVHVSESSDDDEEEEENIGCEEKAKKNANKPLLDEIVPVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRSKSVYY
RVYYTR
A
polypeptide(L)
no
no
GAHSERTFETAPSEIDADEVLEILSKSKPAPTHLTLER
GAHSERTFETAPSEIDADEVLEILSKSKPAPTHLTLER
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
166
ACBD3, GCP60, GOCAP1, GOLPH1
9606
Homo sapiens
511693
Escherichia coli BL21
Biological sequence
sample
1
38
194965
Aichivirus B
511693
Escherichia coli BL21
Biological sequence
1
2.75
55.25
VAPOR DIFFUSION, SITTING DROP
100mM MOPSO/Bis-Tris pH 6.5, 15% w/v PEG 3.000, 1% w/v DDAO, 10% 1,4-butanediol, 10% w/v glucose, 20mM L-arginine/L-threonine/L-histidine/betaine, 10mM trans-4-hydroxy-L-proline
291
citation
citation_author
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Database references
Data collection
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2016-12-14
1
1
2017-12-13
1
2
2020-07-29
1
3
2024-01-17
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DGlcpb
b-D-glucopyranose
b-D-Glcp
Glc
N
PDBE
Y
PDBE
2016-09-29
REL
REL
BGC
beta-D-glucopyranose
5LZ1
PDB
experimental model
BGC
1
3
BGC
BGC
601
A
n
1
363
A
n
2
364
A
n
3
365
A
LEU
366
n
4
LEU
366
A
PRO
367
n
5
PRO
367
A
VAL
368
n
6
VAL
368
A
ILE
369
n
7
ILE
369
A
ALA
370
n
8
ALA
370
A
ALA
371
n
9
ALA
371
A
PRO
372
n
10
PRO
372
A
SER
373
n
11
SER
373
A
MET
374
n
12
MET
374
A
TRP
375
n
13
TRP
375
A
THR
376
n
14
THR
376
A
ARG
377
n
15
ARG
377
A
PRO
378
n
16
PRO
378
A
GLN
379
n
17
GLN
379
A
ILE
380
n
18
ILE
380
A
LYS
381
n
19
LYS
381
A
ASP
382
n
20
ASP
382
A
PHE
383
n
21
PHE
383
A
LYS
384
n
22
LYS
384
A
GLU
385
n
23
GLU
385
A
LYS
386
n
24
LYS
386
A
ILE
387
n
25
ILE
387
A
GLN
388
n
26
GLN
388
A
GLN
389
n
27
GLN
389
A
ASP
390
n
28
ASP
390
A
ALA
391
n
29
ALA
391
A
ASP
392
n
30
ASP
392
A
SER
393
n
31
SER
393
A
VAL
394
n
32
VAL
394
A
ILE
395
n
33
ILE
395
A
THR
396
n
34
THR
396
A
VAL
397
n
35
VAL
397
A
GLY
398
n
36
GLY
398
A
ARG
399
n
37
ARG
399
A
GLY
400
n
38
GLY
400
A
GLU
401
n
39
GLU
401
A
VAL
402
n
40
VAL
402
A
VAL
403
n
41
VAL
403
A
THR
404
n
42
THR
404
A
VAL
405
n
43
VAL
405
A
ARG
406
n
44
ARG
406
A
VAL
407
n
45
VAL
407
A
PRO
408
n
46
PRO
408
A
THR
409
n
47
THR
409
A
HIS
410
n
48
HIS
410
A
GLU
411
n
49
GLU
411
A
GLU
412
n
50
GLU
412
A
GLY
413
n
51
GLY
413
A
SER
414
n
52
SER
414
A
TYR
415
n
53
TYR
415
A
LEU
416
n
54
LEU
416
A
PHE
417
n
55
PHE
417
A
TRP
418
n
56
TRP
418
A
GLU
419
n
57
GLU
419
A
PHE
420
n
58
PHE
420
A
ALA
421
n
59
ALA
421
A
THR
422
n
60
THR
422
A
ASP
423
n
61
ASP
423
A
ASN
424
n
62
ASN
424
A
TYR
425
n
63
TYR
425
A
ASP
426
n
64
ASP
426
A
ILE
427
n
65
ILE
427
A
GLY
428
n
66
GLY
428
A
PHE
429
n
67
PHE
429
A
GLY
430
n
68
GLY
430
A
VAL
431
n
69
VAL
431
A
TYR
432
n
70
TYR
432
A
PHE
433
n
71
PHE
433
A
GLU
434
n
72
GLU
434
A
TRP
435
n
73
TRP
435
A
THR
436
n
74
THR
436
A
n
75
437
A
n
76
438
A
n
77
439
A
n
78
440
A
n
79
441
A
n
80
442
A
n
81
443
A
n
82
444
A
n
83
445
A
n
84
446
A
n
85
447
A
n
86
448
A
n
87
449
A
n
88
450
A
n
89
451
A
n
90
452
A
n
91
453
A
n
92
454
A
n
93
455
A
n
94
456
A
n
95
457
A
n
96
458
A
n
97
459
A
n
98
460
A
n
99
461
A
n
100
462
A
n
101
463
A
n
102
464
A
n
103
465
A
n
104
466
A
n
105
467
A
n
106
468
A
n
107
469
A
n
108
470
A
n
109
471
A
n
110
472
A
n
111
473
A
PRO
474
n
112
PRO
474
A
LEU
475
n
113
LEU
475
A
LEU
476
n
114
LEU
476
A
ASP
477
n
115
ASP
477
A
GLU
478
n
116
GLU
478
A
ILE
479
n
117
ILE
479
A
VAL
480
n
118
VAL
480
A
PRO
481
n
119
PRO
481
A
VAL
482
n
120
VAL
482
A
TYR
483
n
121
TYR
483
A
ARG
484
n
122
ARG
484
A
ARG
485
n
123
ARG
485
A
ASP
486
n
124
ASP
486
A
CYS
487
n
125
CYS
487
A
HIS
488
n
126
HIS
488
A
GLU
489
n
127
GLU
489
A
GLU
490
n
128
GLU
490
A
VAL
491
n
129
VAL
491
A
TYR
492
n
130
TYR
492
A
ALA
493
n
131
ALA
493
A
GLY
494
n
132
GLY
494
A
SER
495
n
133
SER
495
A
HIS
496
n
134
HIS
496
A
GLN
497
n
135
GLN
497
A
TYR
498
n
136
TYR
498
A
PRO
499
n
137
PRO
499
A
GLY
500
n
138
GLY
500
A
ARG
501
n
139
ARG
501
A
GLY
502
n
140
GLY
502
A
VAL
503
n
141
VAL
503
A
TYR
504
n
142
TYR
504
A
LEU
505
n
143
LEU
505
A
LEU
506
n
144
LEU
506
A
LYS
507
n
145
LYS
507
A
PHE
508
n
146
PHE
508
A
ASP
509
n
147
ASP
509
A
ASN
510
n
148
ASN
510
A
SER
511
n
149
SER
511
A
TYR
512
n
150
TYR
512
A
SER
513
n
151
SER
513
A
LEU
514
n
152
LEU
514
A
TRP
515
n
153
TRP
515
A
ARG
516
n
154
ARG
516
A
SER
517
n
155
SER
517
A
LYS
518
n
156
LYS
518
A
SER
519
n
157
SER
519
A
VAL
520
n
158
VAL
520
A
TYR
521
n
159
TYR
521
A
TYR
522
n
160
TYR
522
A
ARG
523
n
161
ARG
523
A
VAL
524
n
162
VAL
524
A
TYR
525
n
163
TYR
525
A
TYR
526
n
164
TYR
526
A
THR
527
n
165
THR
527
A
ARG
528
n
166
ARG
528
A
n
1
1
B
n
2
2
B
n
3
3
B
SER
4
n
4
SER
4
B
GLU
5
n
5
GLU
5
B
ARG
6
n
6
ARG
6
B
THR
7
n
7
THR
7
B
PHE
8
n
8
PHE
8
B
GLU
9
n
9
GLU
9
B
THR
10
n
10
THR
10
B
ALA
11
n
11
ALA
11
B
PRO
12
n
12
PRO
12
B
SER
13
n
13
SER
13
B
GLU
14
n
14
GLU
14
B
ILE
15
n
15
ILE
15
B
ASP
16
n
16
ASP
16
B
ALA
17
n
17
ALA
17
B
ASP
18
n
18
ASP
18
B
GLU
19
n
19
GLU
19
B
VAL
20
n
20
VAL
20
B
LEU
21
n
21
LEU
21
B
GLU
22
n
22
GLU
22
B
ILE
23
n
23
ILE
23
B
LEU
24
n
24
LEU
24
B
SER
25
n
25
SER
25
B
LYS
26
n
26
LYS
26
B
SER
27
n
27
SER
27
B
LYS
28
n
28
LYS
28
B
PRO
29
n
29
PRO
29
B
ALA
30
n
30
ALA
30
B
PRO
31
n
31
PRO
31
B
THR
32
n
32
THR
32
B
HIS
33
n
33
HIS
33
B
LEU
34
n
34
LEU
34
B
n
35
35
B
n
36
36
B
n
37
37
B
n
38
38
B
author_and_software_defined_assembly
PISA
2
dimeric
2850
-14
8370
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
395
A
N
ILE
33
A
O
VAL
520
A
O
VAL
158
A
N
VAL
524
A
N
VAL
162
B
O
SER
13
B
O
SER
13
A
N
ILE
395
A
N
ILE
33
A
O
VAL
520
A
O
VAL
158
A
O
TYR
525
A
O
TYR
163
A
N
PHE
417
A
N
PHE
55
A
N
LEU
416
A
N
LEU
54
A
O
HIS
496
A
O
HIS
134
A
O
VAL
491
A
O
VAL
129
A
N
ARG
377
A
N
ARG
15
A
N
THR
376
A
N
THR
14
B
O
LYS
28
B
O
LYS
28
A
O
ARG
485
A
O
ARG
123
A
N
ILE
427
A
N
ILE
65
A
N
GLU
434
A
N
GLU
72
A
O
VAL
503
A
O
VAL
141
A
O
PHE
508
A
O
PHE
146
A
N
VAL
403
A
N
VAL
41
A
N
ARG
406
A
N
ARG
44
B
O
PHE
8
B
O
PHE
8
1
A
CG
LYS
386
A
CG
LYS
24
1
Y
1
A
CD
LYS
386
A
CD
LYS
24
1
Y
1
A
CE
LYS
386
A
CE
LYS
24
1
Y
1
A
NZ
LYS
386
A
NZ
LYS
24
1
Y
1
A
CG
ASP
392
A
CG
ASP
30
1
Y
1
A
OD1
ASP
392
A
OD1
ASP
30
1
Y
1
A
OD2
ASP
392
A
OD2
ASP
30
1
Y
1
A
CG
GLU
411
A
CG
GLU
49
1
Y
1
A
CD
GLU
411
A
CD
GLU
49
1
Y
1
A
OE1
GLU
411
A
OE1
GLU
49
1
Y
1
A
OE2
GLU
411
A
OE2
GLU
49
1
Y
1
A
CG
GLU
412
A
CG
GLU
50
1
Y
1
A
CD
GLU
412
A
CD
GLU
50
1
Y
1
A
OE1
GLU
412
A
OE1
GLU
50
1
Y
1
A
OE2
GLU
412
A
OE2
GLU
50
1
Y
1
A
CG
TYR
483
A
CG
TYR
121
1
Y
1
A
CD1
TYR
483
A
CD1
TYR
121
1
Y
1
A
CD2
TYR
483
A
CD2
TYR
121
1
Y
1
A
CE1
TYR
483
A
CE1
TYR
121
1
Y
1
A
CE2
TYR
483
A
CE2
TYR
121
1
Y
1
A
CZ
TYR
483
A
CZ
TYR
121
1
Y
1
A
OH
TYR
483
A
OH
TYR
121
1
Y
1
A
CG
ARG
528
A
CG
ARG
166
1
Y
1
A
CD
ARG
528
A
CD
ARG
166
1
Y
1
A
NE
ARG
528
A
NE
ARG
166
1
Y
1
A
CZ
ARG
528
A
CZ
ARG
166
1
Y
1
A
NH1
ARG
528
A
NH1
ARG
166
1
Y
1
A
NH2
ARG
528
A
NH2
ARG
166
1
Y
1
A
MET
363
A
MET
1
1
Y
1
A
GLU
364
A
GLU
2
1
Y
1
A
SER
365
A
SER
3
1
Y
1
A
ASP
437
A
ASP
75
1
Y
1
A
SER
438
A
SER
76
1
Y
1
A
PRO
439
A
PRO
77
1
Y
1
A
ASN
440
A
ASN
78
1
Y
1
A
THR
441
A
THR
79
1
Y
1
A
ALA
442
A
ALA
80
1
Y
1
A
VAL
443
A
VAL
81
1
Y
1
A
SER
444
A
SER
82
1
Y
1
A
VAL
445
A
VAL
83
1
Y
1
A
HIS
446
A
HIS
84
1
Y
1
A
VAL
447
A
VAL
85
1
Y
1
A
SER
448
A
SER
86
1
Y
1
A
GLU
449
A
GLU
87
1
Y
1
A
SER
450
A
SER
88
1
Y
1
A
SER
451
A
SER
89
1
Y
1
A
ASP
452
A
ASP
90
1
Y
1
A
ASP
453
A
ASP
91
1
Y
1
A
ASP
454
A
ASP
92
1
Y
1
A
GLU
455
A
GLU
93
1
Y
1
A
GLU
456
A
GLU
94
1
Y
1
A
GLU
457
A
GLU
95
1
Y
1
A
GLU
458
A
GLU
96
1
Y
1
A
GLU
459
A
GLU
97
1
Y
1
A
ASN
460
A
ASN
98
1
Y
1
A
ILE
461
A
ILE
99
1
Y
1
A
GLY
462
A
GLY
100
1
Y
1
A
CYS
463
A
CYS
101
1
Y
1
A
GLU
464
A
GLU
102
1
Y
1
A
GLU
465
A
GLU
103
1
Y
1
A
LYS
466
A
LYS
104
1
Y
1
A
ALA
467
A
ALA
105
1
Y
1
A
LYS
468
A
LYS
106
1
Y
1
A
LYS
469
A
LYS
107
1
Y
1
A
ASN
470
A
ASN
108
1
Y
1
A
ALA
471
A
ALA
109
1
Y
1
A
ASN
472
A
ASN
110
1
Y
1
A
LYS
473
A
LYS
111
1
Y
1
B
GLY
1
B
GLY
1
1
Y
1
B
ALA
2
B
ALA
2
1
Y
1
B
HIS
3
B
HIS
3
1
Y
1
B
THR
35
B
THR
35
1
Y
1
B
LEU
36
B
LEU
36
1
Y
1
B
GLU
37
B
GLU
37
1
Y
1
B
ARG
38
B
ARG
38
1
Y
1
A
A
OD2
O3
ASP
BGC
426
601
2.15
1
A
ASN
424
71.91
-28.18
1
A
ILE
479
-95.47
-61.86
0.2603
0.2149
0.2171
2.600
48.177
424
8471
5.01
99.95
0.46
random selection
1
FREE R-VALUE
1.36
MOLECULAR REPLACEMENT
31.31
0.90
1.11
5LZ1
2.600
48.177
0
1279
12
0
1267
0.003
1316
0.708
1794
11.980
463
0.028
197
0.003
225
0.3346
0.3201
2.9762
137
2605
100.00
0.2870
0.2670
3.7495
140
2654
100.00
0.2397
0.1801
48.1852
147
2788
100.00
77.41
2.6
48.18
5LZ6
8472
1.000
0.07815
0.07815
1
22.47
10.4
99.96
1.984
2.6
2.693
1.24
0.454
1
10.8
100.00
refinement
PHENIX
1.9_1692
data reduction
XDS
version Oct 15, 2015
data scaling
XDS
version Oct 15, 2015
phasing
PHASER
2.5.6
N
Crystal structure of human ACBD3 GOLD domain in complex with 3A protein of Aichivirus B
1
N
N
2
N
N
3
N
N
A
GLN
379
A
GLN
17
HELX_P
A
GLN
388
A
GLN
26
1
AA1
10
B
ASP
16
B
ASP
16
HELX_P
B
SER
25
B
SER
25
1
AA2
10
ANTIVIRAL PROTEIN
ACBD3, GOLD, 3A, Aichivirus, Antiviral protein
GCP60_HUMAN
UNP
1
364
Q9H3P7
ESLPVIAAPSMWTRPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFWEFATDNYDIGFGVYFEWTDSPNTAV
SVHVSESSDDDEEEEENIGCEEKAKKNANKPLLDEIVPVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRSKSVYYR
VYYTR
Q8BES6_9PICO
UNP
2
1679
Q8BES6
GAHSERTFETAPSEIDADEVLEILSKSKPAPTHLTLER
364
528
5LZ6
364
528
Q9H3P7
A
1
2
166
1679
1716
5LZ6
1
38
Q8BES6
B
2
1
38
1
initiating methionine
MET
363
5LZ6
A
Q9H3P7
UNP
1
3
6
5
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
A
VAL
394
A
VAL
32
A
VAL
397
A
VAL
35
A
LYS
518
A
LYS
156
A
THR
527
A
THR
165
B
SER
13
B
SER
13
B
GLU
14
B
GLU
14
A
VAL
394
A
VAL
32
A
VAL
397
A
VAL
35
A
LYS
518
A
LYS
156
A
THR
527
A
THR
165
A
TYR
415
A
TYR
53
A
THR
422
A
THR
60
A
VAL
491
A
VAL
129
A
GLN
497
A
GLN
135
A
SER
373
A
SER
11
A
ARG
377
A
ARG
15
B
LYS
28
B
LYS
28
B
PRO
29
B
PRO
29
A
LEU
476
A
LEU
114
A
ARG
485
A
ARG
123
A
ILE
427
A
ILE
65
A
TRP
435
A
TRP
73
A
GLY
502
A
GLY
140
A
ASP
509
A
ASP
147
A
VAL
402
A
VAL
40
A
PRO
408
A
PRO
46
B
GLU
5
B
GLU
5
B
GLU
9
B
GLU
9
152
P 31 2 1