0.012470 0.007200 0.000000 0.000000 0.014400 0.000000 0.000000 0.000000 0.003405 0.00000 0.00000 0.00000 Quistgaard, E.M. Molledo, M.M. Nordlund, P. Loew, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 80.190 80.190 293.690 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US PLoS ONE 1932-6203 12 e0173126 e0173126 10.1371/journal.pone.0173126 28264013 Structure determination of a major facilitator peptide transporter: Inward facing PepTSt from Streptococcus thermophilus crystallized in space group P3121. 2017 100 1 CCD 2012-07-05 ADSC QUANTUM 315 Double crystal SINGLE WAVELENGTH M x-ray 1 0.9795 1.0 I04 Diamond 0.9795 SYNCHROTRON DIAMOND BEAMLINE I04 53648.074 Di-or tripeptide:H+ symporter 1 man polymer no no MEDKGKTFFGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADR IIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAF IAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNL VGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFP VSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGE MLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLSKRIQGLMQ GVEAENLYFQ MEDKGKTFFGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADR IIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAF IAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNL VGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFP VSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGE MLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLSKRIQGLMQ GVEAENLYFQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 490 BAA-250 dtpT, stu0970 264199 Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) 562 Escherichia coli Biological sequence 1 5.08 75.79 Rod-shaped crystal VAPOR DIFFUSION, SITTING DROP 8.0 0.05 M HEPES pH 8.0, 30% PEG550 MME, 1.2% Fos-Choline 10 277 citation citation_author repository Initial release Database references 1 0 2017-01-25 1 1 2017-10-04 _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year Sweden Swedish Research Council 621-2013-5905 European Communitys Seventh Framework Programme (FP7/2007-2013) under BioStruct-X N PDBE Y PDBE 2016-12-12 REL REL n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A n 9 9 A n 10 10 A GLN 11 n 11 GLN 11 A PRO 12 n 12 PRO 12 A LEU 13 n 13 LEU 13 A GLY 14 n 14 GLY 14 A LEU 15 n 15 LEU 15 A SER 16 n 16 SER 16 A THR 17 n 17 THR 17 A LEU 18 n 18 LEU 18 A PHE 19 n 19 PHE 19 A MET 20 n 20 MET 20 A THR 21 n 21 THR 21 A GLU 22 n 22 GLU 22 A MET 23 n 23 MET 23 A TRP 24 n 24 TRP 24 A GLU 25 n 25 GLU 25 A ARG 26 n 26 ARG 26 A PHE 27 n 27 PHE 27 A SER 28 n 28 SER 28 A TYR 29 n 29 TYR 29 A TYR 30 n 30 TYR 30 A GLY 31 n 31 GLY 31 A MET 32 n 32 MET 32 A ARG 33 n 33 ARG 33 A ALA 34 n 34 ALA 34 A ILE 35 n 35 ILE 35 A LEU 36 n 36 LEU 36 A LEU 37 n 37 LEU 37 A TYR 38 n 38 TYR 38 A TYR 39 n 39 TYR 39 A MET 40 n 40 MET 40 A TRP 41 n 41 TRP 41 A PHE 42 n 42 PHE 42 A LEU 43 n 43 LEU 43 A ILE 44 n 44 ILE 44 A SER 45 n 45 SER 45 A THR 46 n 46 THR 46 A GLY 47 n 47 GLY 47 A ASP 48 n 48 ASP 48 A LEU 49 n 49 LEU 49 A HIS 50 n 50 HIS 50 A ILE 51 n 51 ILE 51 A THR 52 n 52 THR 52 A ARG 53 n 53 ARG 53 A ALA 54 n 54 ALA 54 A THR 55 n 55 THR 55 A ALA 56 n 56 ALA 56 A ALA 57 n 57 ALA 57 A SER 58 n 58 SER 58 A ILE 59 n 59 ILE 59 A MET 60 n 60 MET 60 A ALA 61 n 61 ALA 61 A ILE 62 n 62 ILE 62 A TYR 63 n 63 TYR 63 A ALA 64 n 64 ALA 64 A SER 65 n 65 SER 65 A MET 66 n 66 MET 66 A VAL 67 n 67 VAL 67 A TYR 68 n 68 TYR 68 A LEU 69 n 69 LEU 69 A SER 70 n 70 SER 70 A GLY 71 n 71 GLY 71 A THR 72 n 72 THR 72 A ILE 73 n 73 ILE 73 A GLY 74 n 74 GLY 74 A GLY 75 n 75 GLY 75 A PHE 76 n 76 PHE 76 A VAL 77 n 77 VAL 77 A ALA 78 n 78 ALA 78 A ASP 79 n 79 ASP 79 A ARG 80 n 80 ARG 80 A ILE 81 n 81 ILE 81 A ILE 82 n 82 ILE 82 A GLY 83 n 83 GLY 83 A ALA 84 n 84 ALA 84 A ARG 85 n 85 ARG 85 A PRO 86 n 86 PRO 86 A ALA 87 n 87 ALA 87 A VAL 88 n 88 VAL 88 A PHE 89 n 89 PHE 89 A TRP 90 n 90 TRP 90 A GLY 91 n 91 GLY 91 A GLY 92 n 92 GLY 92 A VAL 93 n 93 VAL 93 A LEU 94 n 94 LEU 94 A ILE 95 n 95 ILE 95 A MET 96 n 96 MET 96 A LEU 97 n 97 LEU 97 A GLY 98 n 98 GLY 98 A HIS 99 n 99 HIS 99 A ILE 100 n 100 ILE 100 A VAL 101 n 101 VAL 101 A LEU 102 n 102 LEU 102 A ALA 103 n 103 ALA 103 A LEU 104 n 104 LEU 104 A PRO 105 n 105 PRO 105 A PHE 106 n 106 PHE 106 A GLY 107 n 107 GLY 107 A ALA 108 n 108 ALA 108 A SER 109 n 109 SER 109 A ALA 110 n 110 ALA 110 A LEU 111 n 111 LEU 111 A PHE 112 n 112 PHE 112 A GLY 113 n 113 GLY 113 A SER 114 n 114 SER 114 A ILE 115 n 115 ILE 115 A ILE 116 n 116 ILE 116 A LEU 117 n 117 LEU 117 A ILE 118 n 118 ILE 118 A ILE 119 n 119 ILE 119 A ILE 120 n 120 ILE 120 A GLY 121 n 121 GLY 121 A THR 122 n 122 THR 122 A GLY 123 n 123 GLY 123 A PHE 124 n 124 PHE 124 A LEU 125 n 125 LEU 125 A LYS 126 n 126 LYS 126 A PRO 127 n 127 PRO 127 A ASN 128 n 128 ASN 128 A VAL 129 n 129 VAL 129 A SER 130 n 130 SER 130 A THR 131 n 131 THR 131 A LEU 132 n 132 LEU 132 A VAL 133 n 133 VAL 133 A GLY 134 n 134 GLY 134 A THR 135 n 135 THR 135 A LEU 136 n 136 LEU 136 A TYR 137 n 137 TYR 137 A ASP 138 n 138 ASP 138 A GLU 139 n 139 GLU 139 A HIS 140 n 140 HIS 140 A ASP 141 n 141 ASP 141 A ARG 142 n 142 ARG 142 A ARG 143 n 143 ARG 143 A ARG 144 n 144 ARG 144 A ASP 145 n 145 ASP 145 A ALA 146 n 146 ALA 146 A GLY 147 n 147 GLY 147 A PHE 148 n 148 PHE 148 A SER 149 n 149 SER 149 A ILE 150 n 150 ILE 150 A PHE 151 n 151 PHE 151 A VAL 152 n 152 VAL 152 A PHE 153 n 153 PHE 153 A GLY 154 n 154 GLY 154 A ILE 155 n 155 ILE 155 A ASN 156 n 156 ASN 156 A LEU 157 n 157 LEU 157 A GLY 158 n 158 GLY 158 A ALA 159 n 159 ALA 159 A PHE 160 n 160 PHE 160 A ILE 161 n 161 ILE 161 A ALA 162 n 162 ALA 162 A PRO 163 n 163 PRO 163 A LEU 164 n 164 LEU 164 A ILE 165 n 165 ILE 165 A VAL 166 n 166 VAL 166 A GLY 167 n 167 GLY 167 A ALA 168 n 168 ALA 168 A ALA 169 n 169 ALA 169 A GLN 170 n 170 GLN 170 A GLU 171 n 171 GLU 171 A ALA 172 n 172 ALA 172 A ALA 173 n 173 ALA 173 A GLY 174 n 174 GLY 174 A TYR 175 n 175 TYR 175 A HIS 176 n 176 HIS 176 A VAL 177 n 177 VAL 177 A ALA 178 n 178 ALA 178 A PHE 179 n 179 PHE 179 A SER 180 n 180 SER 180 A LEU 181 n 181 LEU 181 A ALA 182 n 182 ALA 182 A ALA 183 n 183 ALA 183 A ILE 184 n 184 ILE 184 A GLY 185 n 185 GLY 185 A MET 186 n 186 MET 186 A PHE 187 n 187 PHE 187 A ILE 188 n 188 ILE 188 A GLY 189 n 189 GLY 189 A LEU 190 n 190 LEU 190 A LEU 191 n 191 LEU 191 A VAL 192 n 192 VAL 192 A TYR 193 n 193 TYR 193 A TYR 194 n 194 TYR 194 A PHE 195 n 195 PHE 195 A GLY 196 n 196 GLY 196 A GLY 197 n 197 GLY 197 A LYS 198 n 198 LYS 198 A LYS 199 n 199 LYS 199 A THR 200 n 200 THR 200 A LEU 201 n 201 LEU 201 A ASP 202 n 202 ASP 202 A PRO 203 n 203 PRO 203 A HIS 204 n 204 HIS 204 A TYR 205 n 205 TYR 205 A LEU 206 n 206 LEU 206 A ARG 207 n 207 ARG 207 A PRO 208 n 208 PRO 208 A THR 209 n 209 THR 209 A ASP 210 n 210 ASP 210 A PRO 211 n 211 PRO 211 A n 212 212 A n 213 213 A n 214 214 A GLU 215 n 215 GLU 215 A GLU 216 n 216 GLU 216 A VAL 217 n 217 VAL 217 A LYS 218 n 218 LYS 218 A PRO 219 n 219 PRO 219 A LEU 220 n 220 LEU 220 A LEU 221 n 221 LEU 221 A VAL 222 n 222 VAL 222 A LYS 223 n 223 LYS 223 A VAL 224 n 224 VAL 224 A SER 225 n 225 SER 225 A LEU 226 n 226 LEU 226 A ALA 227 n 227 ALA 227 A VAL 228 n 228 VAL 228 A ALA 229 n 229 ALA 229 A GLY 230 n 230 GLY 230 A PHE 231 n 231 PHE 231 A ILE 232 n 232 ILE 232 A ALA 233 n 233 ALA 233 A ILE 234 n 234 ILE 234 A ILE 235 n 235 ILE 235 A VAL 236 n 236 VAL 236 A VAL 237 n 237 VAL 237 A MET 238 n 238 MET 238 A ASN 239 n 239 ASN 239 A LEU 240 n 240 LEU 240 A VAL 241 n 241 VAL 241 A GLY 242 n 242 GLY 242 A TRP 243 n 243 TRP 243 A ASN 244 n 244 ASN 244 A SER 245 n 245 SER 245 A LEU 246 n 246 LEU 246 A PRO 247 n 247 PRO 247 A ALA 248 n 248 ALA 248 A TYR 249 n 249 TYR 249 A ILE 250 n 250 ILE 250 A ASN 251 n 251 ASN 251 A LEU 252 n 252 LEU 252 A LEU 253 n 253 LEU 253 A THR 254 n 254 THR 254 A ILE 255 n 255 ILE 255 A VAL 256 n 256 VAL 256 A ALA 257 n 257 ALA 257 A ILE 258 n 258 ILE 258 A ALA 259 n 259 ALA 259 A ILE 260 n 260 ILE 260 A PRO 261 n 261 PRO 261 A VAL 262 n 262 VAL 262 A PHE 263 n 263 PHE 263 A TYR 264 n 264 TYR 264 A n 265 265 A n 266 266 A n 267 267 A n 268 268 A n 269 269 A n 270 270 A n 271 271 A n 272 272 A n 273 273 A n 274 274 A THR 275 n 275 THR 275 A SER 276 n 276 SER 276 A THR 277 n 277 THR 277 A GLU 278 n 278 GLU 278 A HIS 279 n 279 HIS 279 A LEU 280 n 280 LEU 280 A ARG 281 n 281 ARG 281 A VAL 282 n 282 VAL 282 A VAL 283 n 283 VAL 283 A SER 284 n 284 SER 284 A TYR 285 n 285 TYR 285 A ILE 286 n 286 ILE 286 A PRO 287 n 287 PRO 287 A LEU 288 n 288 LEU 288 A PHE 289 n 289 PHE 289 A ILE 290 n 290 ILE 290 A ALA 291 n 291 ALA 291 A ALA 292 n 292 ALA 292 A VAL 293 n 293 VAL 293 A LEU 294 n 294 LEU 294 A PHE 295 n 295 PHE 295 A TRP 296 n 296 TRP 296 A ALA 297 n 297 ALA 297 A ILE 298 n 298 ILE 298 A GLU 299 n 299 GLU 299 A GLU 300 n 300 GLU 300 A GLN 301 n 301 GLN 301 A GLY 302 n 302 GLY 302 A SER 303 n 303 SER 303 A VAL 304 n 304 VAL 304 A VAL 305 n 305 VAL 305 A LEU 306 n 306 LEU 306 A ALA 307 n 307 ALA 307 A THR 308 n 308 THR 308 A PHE 309 n 309 PHE 309 A ALA 310 n 310 ALA 310 A ALA 311 n 311 ALA 311 A GLU 312 n 312 GLU 312 A ARG 313 n 313 ARG 313 A VAL 314 n 314 VAL 314 A ASP 315 n 315 ASP 315 A SER 316 n 316 SER 316 A SER 317 n 317 SER 317 A TRP 318 n 318 TRP 318 A PHE 319 n 319 PHE 319 A PRO 320 n 320 PRO 320 A VAL 321 n 321 VAL 321 A SER 322 n 322 SER 322 A TRP 323 n 323 TRP 323 A PHE 324 n 324 PHE 324 A GLN 325 n 325 GLN 325 A SER 326 n 326 SER 326 A LEU 327 n 327 LEU 327 A ASN 328 n 328 ASN 328 A PRO 329 n 329 PRO 329 A LEU 330 n 330 LEU 330 A PHE 331 n 331 PHE 331 A ILE 332 n 332 ILE 332 A MET 333 n 333 MET 333 A LEU 334 n 334 LEU 334 A TYR 335 n 335 TYR 335 A THR 336 n 336 THR 336 A PRO 337 n 337 PRO 337 A PHE 338 n 338 PHE 338 A PHE 339 n 339 PHE 339 A ALA 340 n 340 ALA 340 A TRP 341 n 341 TRP 341 A LEU 342 n 342 LEU 342 A TRP 343 n 343 TRP 343 A THR 344 n 344 THR 344 A n 345 345 A n 346 346 A n 347 347 A n 348 348 A n 349 349 A n 350 350 A n 351 351 A SER 352 n 352 SER 352 A SER 353 n 353 SER 353 A PRO 354 n 354 PRO 354 A THR 355 n 355 THR 355 A LYS 356 n 356 LYS 356 A PHE 357 n 357 PHE 357 A ALA 358 n 358 ALA 358 A VAL 359 n 359 VAL 359 A GLY 360 n 360 GLY 360 A LEU 361 n 361 LEU 361 A MET 362 n 362 MET 362 A PHE 363 n 363 PHE 363 A ALA 364 n 364 ALA 364 A GLY 365 n 365 GLY 365 A LEU 366 n 366 LEU 366 A SER 367 n 367 SER 367 A PHE 368 n 368 PHE 368 A LEU 369 n 369 LEU 369 A LEU 370 n 370 LEU 370 A MET 371 n 371 MET 371 A ALA 372 n 372 ALA 372 A ILE 373 n 373 ILE 373 A PRO 374 n 374 PRO 374 A GLY 375 n 375 GLY 375 A ALA 376 n 376 ALA 376 A LEU 377 n 377 LEU 377 A TYR 378 n 378 TYR 378 A GLY 379 n 379 GLY 379 A THR 380 n 380 THR 380 A SER 381 n 381 SER 381 A GLY 382 n 382 GLY 382 A LYS 383 n 383 LYS 383 A VAL 384 n 384 VAL 384 A SER 385 n 385 SER 385 A PRO 386 n 386 PRO 386 A LEU 387 n 387 LEU 387 A TRP 388 n 388 TRP 388 A LEU 389 n 389 LEU 389 A VAL 390 n 390 VAL 390 A GLY 391 n 391 GLY 391 A SER 392 n 392 SER 392 A TRP 393 n 393 TRP 393 A ALA 394 n 394 ALA 394 A LEU 395 n 395 LEU 395 A VAL 396 n 396 VAL 396 A ILE 397 n 397 ILE 397 A LEU 398 n 398 LEU 398 A GLY 399 n 399 GLY 399 A GLU 400 n 400 GLU 400 A MET 401 n 401 MET 401 A LEU 402 n 402 LEU 402 A ILE 403 n 403 ILE 403 A n 404 404 A n 405 405 A n 406 406 A n 407 407 A n 408 408 A n 409 409 A n 410 410 A n 411 411 A n 412 412 A n 413 413 A n 414 414 A n 415 415 A n 416 416 A n 417 417 A n 418 418 A n 419 419 A n 420 420 A SER 421 n 421 SER 421 A GLN 422 n 422 GLN 422 A MET 423 n 423 MET 423 A MET 424 n 424 MET 424 A SER 425 n 425 SER 425 A MET 426 n 426 MET 426 A TRP 427 n 427 TRP 427 A PHE 428 n 428 PHE 428 A LEU 429 n 429 LEU 429 A SER 430 n 430 SER 430 A SER 431 n 431 SER 431 A SER 432 n 432 SER 432 A VAL 433 n 433 VAL 433 A GLY 434 n 434 GLY 434 A SER 435 n 435 SER 435 A ALA 436 n 436 ALA 436 A LEU 437 n 437 LEU 437 A ASN 438 n 438 ASN 438 A ALA 439 n 439 ALA 439 A GLN 440 n 440 GLN 440 A LEU 441 n 441 LEU 441 A VAL 442 n 442 VAL 442 A THR 443 n 443 THR 443 A LEU 444 n 444 LEU 444 A TYR 445 n 445 TYR 445 A ASN 446 n 446 ASN 446 A ALA 447 n 447 ALA 447 A LYS 448 n 448 LYS 448 A SER 449 n 449 SER 449 A GLU 450 n 450 GLU 450 A VAL 451 n 451 VAL 451 A ALA 452 n 452 ALA 452 A TYR 453 n 453 TYR 453 A PHE 454 n 454 PHE 454 A SER 455 n 455 SER 455 A TYR 456 n 456 TYR 456 A PHE 457 n 457 PHE 457 A GLY 458 n 458 GLY 458 A LEU 459 n 459 LEU 459 A GLY 460 n 460 GLY 460 A SER 461 n 461 SER 461 A VAL 462 n 462 VAL 462 A VAL 463 n 463 VAL 463 A LEU 464 n 464 LEU 464 A GLY 465 n 465 GLY 465 A ILE 466 n 466 ILE 466 A VAL 467 n 467 VAL 467 A LEU 468 n 468 LEU 468 A VAL 469 n 469 VAL 469 A PHE 470 n 470 PHE 470 A LEU 471 n 471 LEU 471 A SER 472 n 472 SER 472 A n 473 473 A n 474 474 A n 475 475 A n 476 476 A n 477 477 A n 478 478 A n 479 479 A n 480 480 A n 481 481 A n 482 482 A n 483 483 A n 484 484 A n 485 485 A n 486 486 A n 487 487 A n 488 488 A n 489 489 A n 490 490 A 5.4879 1.1137 1.3581 3.2331 1.4566 5.2727 -0.3592 0.6528 -0.0744 -1.3202 0.5745 0.0902 -0.1144 0.0518 -0.0971 1.3796 -0.6503 -0.3807 0.5457 0.0886 0.5299 refined 85.5225 -29.2027 25.7457 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain 'A' author_and_software_defined_assembly PISA 1 monomeric 0 0 20450 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A MET 1 A MET 1 1 Y 1 A GLU 2 A GLU 2 1 Y 1 A ASP 3 A ASP 3 1 Y 1 A LYS 4 A LYS 4 1 Y 1 A GLY 5 A GLY 5 1 Y 1 A LYS 6 A LYS 6 1 Y 1 A THR 7 A THR 7 1 Y 1 A PHE 8 A PHE 8 1 Y 1 A PHE 9 A PHE 9 1 Y 1 A GLY 10 A GLY 10 1 Y 1 A LEU 212 A LEU 212 1 Y 1 A ALA 213 A ALA 213 1 Y 1 A PRO 214 A PRO 214 1 Y 1 A PHE 265 A PHE 265 1 Y 1 A ALA 266 A ALA 266 1 Y 1 A TRP 267 A TRP 267 1 Y 1 A MET 268 A MET 268 1 Y 1 A ILE 269 A ILE 269 1 Y 1 A SER 270 A SER 270 1 Y 1 A SER 271 A SER 271 1 Y 1 A VAL 272 A VAL 272 1 Y 1 A LYS 273 A LYS 273 1 Y 1 A VAL 274 A VAL 274 1 Y 1 A ALA 345 A ALA 345 1 Y 1 A TRP 346 A TRP 346 1 Y 1 A LYS 347 A LYS 347 1 Y 1 A LYS 348 A LYS 348 1 Y 1 A ASN 349 A ASN 349 1 Y 1 A GLN 350 A GLN 350 1 Y 1 A PRO 351 A PRO 351 1 Y 1 A SER 404 A SER 404 1 Y 1 A PRO 405 A PRO 405 1 Y 1 A VAL 406 A VAL 406 1 Y 1 A GLY 407 A GLY 407 1 Y 1 A LEU 408 A LEU 408 1 Y 1 A SER 409 A SER 409 1 Y 1 A VAL 410 A VAL 410 1 Y 1 A THR 411 A THR 411 1 Y 1 A THR 412 A THR 412 1 Y 1 A LYS 413 A LYS 413 1 Y 1 A LEU 414 A LEU 414 1 Y 1 A ALA 415 A ALA 415 1 Y 1 A PRO 416 A PRO 416 1 Y 1 A LYS 417 A LYS 417 1 Y 1 A ALA 418 A ALA 418 1 Y 1 A PHE 419 A PHE 419 1 Y 1 A ASN 420 A ASN 420 1 Y 1 A LYS 473 A LYS 473 1 Y 1 A ARG 474 A ARG 474 1 Y 1 A ILE 475 A ILE 475 1 Y 1 A GLN 476 A GLN 476 1 Y 1 A GLY 477 A GLY 477 1 Y 1 A LEU 478 A LEU 478 1 Y 1 A MET 479 A MET 479 1 Y 1 A GLN 480 A GLN 480 1 Y 1 A GLY 481 A GLY 481 1 Y 1 A VAL 482 A VAL 482 1 Y 1 A GLU 483 A GLU 483 1 Y 1 A ALA 484 A ALA 484 1 Y 1 A GLU 485 A GLU 485 1 Y 1 A ASN 486 A ASN 486 1 Y 1 A LEU 487 A LEU 487 1 Y 1 A TYR 488 A TYR 488 1 Y 1 A PHE 489 A PHE 489 1 Y 1 A GLN 490 A GLN 490 1 Y 1 A ILE 81 -124.73 -57.53 1 A VAL 304 -127.02 -72.57 1 A ASP 315 -69.98 98.78 127.1 The data set used for refinement was truncated and anisotropically scaled using the Diffraction Anisotropy Server (https://services.mbi.ucla.edu/anisoscale/). Cut-off values for truncation: 3.9 A in the a-direction, 3.7 A in the b-direction and 3.4 A in the best diffracting c-direction of the crystal. 0.2861 0.2652 0.2662 3.4 44.85 589 11292 4.96 74.7 0.37 Random 1 FREE R-VALUE MAD 36.60 0.90 1.11 3.4 44.85 0 3283 0 0 3283 0.005 3377 1.188 4604 11.482 1132 0.045 538 0.006 552 0.3994 0.3201 3.7405 34 641 17.4 0.3216 0.2724 4.2813 154 2964 80.00 0.2579 0.2334 5.3926 195 3768 99.9 0.2854 0.2802 44.85 206 3916 99.00 96.4 3.40 44.85 5MMT 11881 0.999 0.09 0.08 1 13.67 5.3 74.6 0.68 3.40 3.49 3.13 0.834 1 0.5 5.8 refinement PHENIX 1.9_1692 data reduction XDS data scaling XSCALE phasing SHARP N Di-or tripeptide:H+ symporter Inward open PepTSt from Streptococcus thermophilus crystallized in space group P3121 1 N N A LEU 13 A LEU 13 HELX_P A THR 46 A THR 46 1 AA1 34 A THR 52 A THR 52 HELX_P A ILE 81 A ILE 81 1 AA2 30 A GLY 83 A GLY 83 HELX_P A LEU 104 A LEU 104 1 AA3 22 A GLY 107 A GLY 107 HELX_P A LEU 136 A LEU 136 1 AA4 30 A ARG 143 A ARG 143 HELX_P A GLY 174 A GLY 174 1 AA5 32 A GLY 174 A GLY 174 HELX_P A LEU 201 A LEU 201 1 AA6 28 A ASP 202 A ASP 202 HELX_P A ARG 207 A ARG 207 5 AA7 6 A GLU 216 A GLU 216 HELX_P A GLY 242 A GLY 242 1 AA8 27 A SER 245 A SER 245 HELX_P A TYR 264 A TYR 264 1 AA9 20 A SER 276 A SER 276 HELX_P A GLN 301 A GLN 301 1 AB1 26 A VAL 304 A VAL 304 HELX_P A VAL 314 A VAL 314 1 AB2 11 A PRO 320 A PRO 320 HELX_P A GLN 325 A GLN 325 5 AB3 6 A SER 326 A SER 326 HELX_P A THR 344 A THR 344 1 AB4 19 A SER 353 A SER 353 HELX_P A GLY 379 A GLY 379 1 AB5 27 A PRO 386 A PRO 386 HELX_P A MET 401 A MET 401 1 AB6 16 A GLN 422 A GLN 422 HELX_P A VAL 442 A VAL 442 1 AB7 21 A THR 443 A THR 443 HELX_P A TYR 445 A TYR 445 5 AB8 3 A SER 449 A SER 449 HELX_P A SER 472 A SER 472 1 AB9 24 TRANSPORT PROTEIN Integral membrane protein, Major facilitator superfamily transporter (MFS transporter), POT PTR or PepT family, proton-coupled peptide transporter, Transport protein Q5M4H8_STRT2 UNP 1 1 Q5M4H8 MEDKGKTFFGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADR IIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAF IAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNL VGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFP VSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGE MLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVFLSKRIQGLMQ GVE 1 483 5MMT 1 483 Q5M4H8 A 1 1 483 1 expression tag ALA 484 5MMT A Q5M4H8 UNP 484 1 expression tag GLU 485 5MMT A Q5M4H8 UNP 485 1 expression tag ASN 486 5MMT A Q5M4H8 UNP 486 1 expression tag LEU 487 5MMT A Q5M4H8 UNP 487 1 expression tag TYR 488 5MMT A Q5M4H8 UNP 488 1 expression tag PHE 489 5MMT A Q5M4H8 UNP 489 1 expression tag GLN 490 5MMT A Q5M4H8 UNP 490 152 P 31 2 1