0.009160 0.000000 0.002341 -0.000000 0.012214 0.000000 0.000000 -0.000000 0.019293 0.00000 0.00000 0.00000 Zhang, L. Hilgenfeld, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 104.34 90.00 109.165 81.873 53.499 C30 H36 N4 O5 532.631 (2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To Be Published 0353 Alpha-ketoamides as broad-spectrum inhibitors of coronavirus and enterovirus replication 100 1 PIXEL 2015-05-25 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.9919 1.0 P11 PETRA III, DESY 0.9919 SYNCHROTRON PETRA III, DESY BEAMLINE P11 33876.637 Replicase polyprotein 1ab 3.4.19.12,3.4.22.69,3.4.22.-,2.7.7.48,3.6.4.12,3.6.4.13,2.1.1.-,3.1.13.-,3.1.-.- 1 man polymer 532.631 (2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide 1 syn non-polymer 18.015 water 214 nat water pp1ab,ORF1ab polyprotein no no SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGH SMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGH SMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1 306 rep, 1a-1b 227859 SARS coronavirus 562 Escherichia coli Biological sequence 1 3.42 64.02 VAPOR DIFFUSION, SITTING DROP 6.0 6 - 8% polyethylene glycol 6000, 0.1 M MES, pH 6.0 293 repository Initial release 1 0 2018-03-07 Germany German Center for Infection Research TTU 01.803 N PDBE Y PDBE 2017-02-14 REL REL 1 A O HOH 711 5.81 1 A O HOH 712 6.72 1 A O HOH 713 6.72 1 A O HOH 714 8.98 8O5 (2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide HOH water D10 1 2 8O5 8O5 401 A HOH 145 3 HOH HOH 501 A HOH 78 3 HOH HOH 502 A HOH 198 3 HOH HOH 503 A HOH 50 3 HOH HOH 504 A HOH 60 3 HOH HOH 505 A HOH 105 3 HOH HOH 506 A HOH 154 3 HOH HOH 507 A HOH 185 3 HOH HOH 508 A HOH 11 3 HOH HOH 509 A HOH 175 3 HOH HOH 510 A HOH 181 3 HOH HOH 511 A HOH 37 3 HOH HOH 512 A HOH 26 3 HOH HOH 513 A HOH 197 3 HOH HOH 514 A HOH 55 3 HOH HOH 515 A HOH 151 3 HOH HOH 516 A HOH 212 3 HOH HOH 517 A HOH 39 3 HOH HOH 518 A HOH 108 3 HOH HOH 519 A HOH 16 3 HOH HOH 520 A HOH 134 3 HOH HOH 521 A HOH 57 3 HOH HOH 522 A HOH 9 3 HOH HOH 523 A HOH 139 3 HOH HOH 524 A HOH 6 3 HOH HOH 525 A HOH 65 3 HOH HOH 526 A HOH 84 3 HOH HOH 527 A HOH 162 3 HOH HOH 528 A HOH 2 3 HOH HOH 529 A HOH 77 3 HOH HOH 530 A HOH 156 3 HOH HOH 531 A HOH 218 3 HOH HOH 532 A HOH 119 3 HOH HOH 533 A HOH 45 3 HOH HOH 534 A HOH 132 3 HOH HOH 535 A HOH 92 3 HOH HOH 536 A HOH 56 3 HOH HOH 537 A HOH 140 3 HOH HOH 538 A HOH 202 3 HOH HOH 539 A HOH 147 3 HOH HOH 540 A HOH 118 3 HOH HOH 541 A HOH 14 3 HOH HOH 542 A HOH 31 3 HOH HOH 543 A HOH 189 3 HOH HOH 544 A HOH 190 3 HOH HOH 545 A HOH 103 3 HOH HOH 546 A HOH 120 3 HOH HOH 547 A HOH 4 3 HOH HOH 548 A HOH 23 3 HOH HOH 549 A HOH 188 3 HOH HOH 550 A HOH 214 3 HOH HOH 551 A HOH 129 3 HOH HOH 552 A HOH 28 3 HOH HOH 553 A HOH 10 3 HOH HOH 554 A HOH 1 3 HOH HOH 555 A HOH 54 3 HOH HOH 556 A HOH 99 3 HOH HOH 557 A HOH 20 3 HOH HOH 558 A HOH 226 3 HOH HOH 559 A HOH 67 3 HOH HOH 560 A HOH 46 3 HOH HOH 561 A HOH 87 3 HOH HOH 562 A HOH 193 3 HOH HOH 563 A HOH 17 3 HOH HOH 564 A HOH 205 3 HOH HOH 565 A HOH 88 3 HOH HOH 566 A HOH 7 3 HOH HOH 567 A HOH 196 3 HOH HOH 568 A HOH 86 3 HOH HOH 569 A HOH 82 3 HOH HOH 570 A HOH 222 3 HOH HOH 571 A HOH 5 3 HOH HOH 572 A HOH 211 3 HOH HOH 573 A HOH 149 3 HOH HOH 574 A HOH 97 3 HOH HOH 575 A HOH 95 3 HOH HOH 576 A HOH 3 3 HOH HOH 577 A HOH 69 3 HOH HOH 578 A HOH 8 3 HOH HOH 579 A HOH 152 3 HOH HOH 580 A HOH 165 3 HOH HOH 581 A HOH 83 3 HOH HOH 582 A HOH 42 3 HOH HOH 583 A HOH 25 3 HOH HOH 584 A HOH 142 3 HOH HOH 585 A HOH 219 3 HOH HOH 586 A HOH 74 3 HOH HOH 587 A HOH 235 3 HOH HOH 588 A HOH 239 3 HOH HOH 589 A HOH 15 3 HOH HOH 590 A HOH 136 3 HOH HOH 591 A HOH 220 3 HOH HOH 592 A HOH 13 3 HOH HOH 593 A HOH 40 3 HOH HOH 594 A HOH 130 3 HOH HOH 595 A HOH 135 3 HOH HOH 596 A HOH 75 3 HOH HOH 597 A HOH 166 3 HOH HOH 598 A HOH 73 3 HOH HOH 599 A HOH 61 3 HOH HOH 600 A HOH 96 3 HOH HOH 601 A HOH 191 3 HOH HOH 602 A HOH 178 3 HOH HOH 603 A HOH 36 3 HOH HOH 604 A HOH 158 3 HOH HOH 605 A HOH 72 3 HOH HOH 606 A HOH 107 3 HOH HOH 607 A HOH 93 3 HOH HOH 608 A HOH 167 3 HOH HOH 609 A HOH 102 3 HOH HOH 610 A HOH 159 3 HOH HOH 611 A HOH 34 3 HOH HOH 612 A HOH 24 3 HOH HOH 613 A HOH 122 3 HOH HOH 614 A HOH 201 3 HOH HOH 615 A HOH 22 3 HOH HOH 616 A HOH 70 3 HOH HOH 617 A HOH 126 3 HOH HOH 618 A HOH 21 3 HOH HOH 619 A HOH 62 3 HOH HOH 620 A HOH 44 3 HOH HOH 621 A HOH 230 3 HOH HOH 622 A HOH 125 3 HOH HOH 623 A HOH 200 3 HOH HOH 624 A HOH 79 3 HOH HOH 625 A HOH 199 3 HOH HOH 626 A HOH 58 3 HOH HOH 627 A HOH 182 3 HOH HOH 628 A HOH 94 3 HOH HOH 629 A HOH 68 3 HOH HOH 630 A HOH 177 3 HOH HOH 631 A HOH 141 3 HOH HOH 632 A HOH 238 3 HOH HOH 633 A HOH 138 3 HOH HOH 634 A HOH 81 3 HOH HOH 635 A HOH 80 3 HOH HOH 636 A HOH 171 3 HOH HOH 637 A HOH 85 3 HOH HOH 638 A HOH 163 3 HOH HOH 639 A HOH 243 3 HOH HOH 640 A HOH 216 3 HOH HOH 641 A HOH 53 3 HOH HOH 642 A HOH 49 3 HOH HOH 643 A HOH 106 3 HOH HOH 644 A HOH 194 3 HOH HOH 645 A HOH 231 3 HOH HOH 646 A HOH 35 3 HOH HOH 647 A HOH 89 3 HOH HOH 648 A HOH 38 3 HOH HOH 649 A HOH 183 3 HOH HOH 650 A HOH 228 3 HOH HOH 651 A HOH 43 3 HOH HOH 652 A HOH 18 3 HOH HOH 653 A HOH 121 3 HOH HOH 654 A HOH 207 3 HOH HOH 655 A HOH 153 3 HOH HOH 656 A HOH 137 3 HOH HOH 657 A HOH 236 3 HOH HOH 658 A HOH 170 3 HOH HOH 659 A HOH 227 3 HOH HOH 660 A HOH 30 3 HOH HOH 661 A HOH 155 3 HOH HOH 662 A HOH 224 3 HOH HOH 663 A HOH 12 3 HOH HOH 664 A HOH 131 3 HOH HOH 665 A HOH 225 3 HOH HOH 666 A HOH 109 3 HOH HOH 667 A HOH 204 3 HOH HOH 668 A HOH 229 3 HOH HOH 669 A HOH 203 3 HOH HOH 670 A HOH 128 3 HOH HOH 671 A HOH 233 3 HOH HOH 672 A HOH 144 3 HOH HOH 673 A HOH 112 3 HOH HOH 674 A HOH 164 3 HOH HOH 675 A HOH 116 3 HOH HOH 676 A HOH 66 3 HOH HOH 677 A HOH 76 3 HOH HOH 678 A HOH 113 3 HOH HOH 679 A HOH 127 3 HOH HOH 680 A HOH 232 3 HOH HOH 681 A HOH 32 3 HOH HOH 682 A HOH 41 3 HOH HOH 683 A HOH 173 3 HOH HOH 684 A HOH 123 3 HOH HOH 685 A HOH 33 3 HOH HOH 686 A HOH 184 3 HOH HOH 687 A HOH 186 3 HOH HOH 688 A HOH 242 3 HOH HOH 689 A HOH 101 3 HOH HOH 690 A HOH 161 3 HOH HOH 691 A HOH 174 3 HOH HOH 692 A HOH 91 3 HOH HOH 693 A HOH 208 3 HOH HOH 694 A HOH 111 3 HOH HOH 695 A HOH 63 3 HOH HOH 696 A HOH 206 3 HOH HOH 697 A HOH 234 3 HOH HOH 698 A HOH 187 3 HOH HOH 699 A HOH 19 3 HOH HOH 700 A HOH 209 3 HOH HOH 701 A HOH 241 3 HOH HOH 702 A HOH 179 3 HOH HOH 703 A HOH 47 3 HOH HOH 704 A HOH 115 3 HOH HOH 705 A HOH 160 3 HOH HOH 706 A HOH 148 3 HOH HOH 707 A HOH 114 3 HOH HOH 708 A HOH 157 3 HOH HOH 709 A HOH 237 3 HOH HOH 710 A HOH 210 3 HOH HOH 711 A HOH 240 3 HOH HOH 712 A HOH 117 3 HOH HOH 713 A HOH 29 3 HOH HOH 714 A SER 1 n 1 SER 1 A GLY 2 n 2 GLY 2 A PHE 3 n 3 PHE 3 A ARG 4 n 4 ARG 4 A LYS 5 n 5 LYS 5 A MET 6 n 6 MET 6 A ALA 7 n 7 ALA 7 A PHE 8 n 8 PHE 8 A PRO 9 n 9 PRO 9 A SER 10 n 10 SER 10 A GLY 11 n 11 GLY 11 A LYS 12 n 12 LYS 12 A VAL 13 n 13 VAL 13 A GLU 14 n 14 GLU 14 A GLY 15 n 15 GLY 15 A CYS 16 n 16 CYS 16 A MET 17 n 17 MET 17 A VAL 18 n 18 VAL 18 A GLN 19 n 19 GLN 19 A VAL 20 n 20 VAL 20 A THR 21 n 21 THR 21 A CYS 22 n 22 CYS 22 A GLY 23 n 23 GLY 23 A THR 24 n 24 THR 24 A THR 25 n 25 THR 25 A THR 26 n 26 THR 26 A LEU 27 n 27 LEU 27 A ASN 28 n 28 ASN 28 A GLY 29 n 29 GLY 29 A LEU 30 n 30 LEU 30 A TRP 31 n 31 TRP 31 A LEU 32 n 32 LEU 32 A ASP 33 n 33 ASP 33 A ASP 34 n 34 ASP 34 A THR 35 n 35 THR 35 A VAL 36 n 36 VAL 36 A TYR 37 n 37 TYR 37 A CYS 38 n 38 CYS 38 A PRO 39 n 39 PRO 39 A ARG 40 n 40 ARG 40 A HIS 41 n 41 HIS 41 A VAL 42 n 42 VAL 42 A ILE 43 n 43 ILE 43 A CYS 44 n 44 CYS 44 A THR 45 n 45 THR 45 A ALA 46 n 46 ALA 46 A GLU 47 n 47 GLU 47 A ASP 48 n 48 ASP 48 A MET 49 n 49 MET 49 A LEU 50 n 50 LEU 50 A ASN 51 n 51 ASN 51 A PRO 52 n 52 PRO 52 A ASN 53 n 53 ASN 53 A TYR 54 n 54 TYR 54 A GLU 55 n 55 GLU 55 A ASP 56 n 56 ASP 56 A LEU 57 n 57 LEU 57 A LEU 58 n 58 LEU 58 A ILE 59 n 59 ILE 59 A ARG 60 n 60 ARG 60 A LYS 61 n 61 LYS 61 A SER 62 n 62 SER 62 A ASN 63 n 63 ASN 63 A HIS 64 n 64 HIS 64 A SER 65 n 65 SER 65 A PHE 66 n 66 PHE 66 A LEU 67 n 67 LEU 67 A VAL 68 n 68 VAL 68 A GLN 69 n 69 GLN 69 A ALA 70 n 70 ALA 70 A GLY 71 n 71 GLY 71 A ASN 72 n 72 ASN 72 A VAL 73 n 73 VAL 73 A GLN 74 n 74 GLN 74 A LEU 75 n 75 LEU 75 A ARG 76 n 76 ARG 76 A VAL 77 n 77 VAL 77 A ILE 78 n 78 ILE 78 A GLY 79 n 79 GLY 79 A HIS 80 n 80 HIS 80 A SER 81 n 81 SER 81 A MET 82 n 82 MET 82 A GLN 83 n 83 GLN 83 A ASN 84 n 84 ASN 84 A CYS 85 n 85 CYS 85 A LEU 86 n 86 LEU 86 A LEU 87 n 87 LEU 87 A ARG 88 n 88 ARG 88 A LEU 89 n 89 LEU 89 A LYS 90 n 90 LYS 90 A VAL 91 n 91 VAL 91 A ASP 92 n 92 ASP 92 A THR 93 n 93 THR 93 A SER 94 n 94 SER 94 A ASN 95 n 95 ASN 95 A PRO 96 n 96 PRO 96 A LYS 97 n 97 LYS 97 A THR 98 n 98 THR 98 A PRO 99 n 99 PRO 99 A LYS 100 n 100 LYS 100 A TYR 101 n 101 TYR 101 A LYS 102 n 102 LYS 102 A PHE 103 n 103 PHE 103 A VAL 104 n 104 VAL 104 A ARG 105 n 105 ARG 105 A ILE 106 n 106 ILE 106 A GLN 107 n 107 GLN 107 A PRO 108 n 108 PRO 108 A GLY 109 n 109 GLY 109 A GLN 110 n 110 GLN 110 A THR 111 n 111 THR 111 A PHE 112 n 112 PHE 112 A SER 113 n 113 SER 113 A VAL 114 n 114 VAL 114 A LEU 115 n 115 LEU 115 A ALA 116 n 116 ALA 116 A CYS 117 n 117 CYS 117 A TYR 118 n 118 TYR 118 A ASN 119 n 119 ASN 119 A GLY 120 n 120 GLY 120 A SER 121 n 121 SER 121 A PRO 122 n 122 PRO 122 A SER 123 n 123 SER 123 A GLY 124 n 124 GLY 124 A VAL 125 n 125 VAL 125 A TYR 126 n 126 TYR 126 A GLN 127 n 127 GLN 127 A CYS 128 n 128 CYS 128 A ALA 129 n 129 ALA 129 A MET 130 n 130 MET 130 A ARG 131 n 131 ARG 131 A PRO 132 n 132 PRO 132 A ASN 133 n 133 ASN 133 A HIS 134 n 134 HIS 134 A THR 135 n 135 THR 135 A ILE 136 n 136 ILE 136 A LYS 137 n 137 LYS 137 A GLY 138 n 138 GLY 138 A SER 139 n 139 SER 139 A PHE 140 n 140 PHE 140 A LEU 141 n 141 LEU 141 A ASN 142 n 142 ASN 142 A GLY 143 n 143 GLY 143 A SER 144 n 144 SER 144 A CYS 145 n 145 CYS 145 A GLY 146 n 146 GLY 146 A SER 147 n 147 SER 147 A VAL 148 n 148 VAL 148 A GLY 149 n 149 GLY 149 A PHE 150 n 150 PHE 150 A ASN 151 n 151 ASN 151 A ILE 152 n 152 ILE 152 A ASP 153 n 153 ASP 153 A TYR 154 n 154 TYR 154 A ASP 155 n 155 ASP 155 A CYS 156 n 156 CYS 156 A VAL 157 n 157 VAL 157 A SER 158 n 158 SER 158 A PHE 159 n 159 PHE 159 A CYS 160 n 160 CYS 160 A TYR 161 n 161 TYR 161 A MET 162 n 162 MET 162 A HIS 163 n 163 HIS 163 A HIS 164 n 164 HIS 164 A MET 165 n 165 MET 165 A GLU 166 n 166 GLU 166 A LEU 167 n 167 LEU 167 A PRO 168 n 168 PRO 168 A THR 169 n 169 THR 169 A GLY 170 n 170 GLY 170 A VAL 171 n 171 VAL 171 A HIS 172 n 172 HIS 172 A ALA 173 n 173 ALA 173 A GLY 174 n 174 GLY 174 A THR 175 n 175 THR 175 A ASP 176 n 176 ASP 176 A LEU 177 n 177 LEU 177 A GLU 178 n 178 GLU 178 A GLY 179 n 179 GLY 179 A LYS 180 n 180 LYS 180 A PHE 181 n 181 PHE 181 A TYR 182 n 182 TYR 182 A GLY 183 n 183 GLY 183 A PRO 184 n 184 PRO 184 A PHE 185 n 185 PHE 185 A VAL 186 n 186 VAL 186 A ASP 187 n 187 ASP 187 A ARG 188 n 188 ARG 188 A GLN 189 n 189 GLN 189 A THR 190 n 190 THR 190 A ALA 191 n 191 ALA 191 A GLN 192 n 192 GLN 192 A ALA 193 n 193 ALA 193 A ALA 194 n 194 ALA 194 A GLY 195 n 195 GLY 195 A THR 196 n 196 THR 196 A ASP 197 n 197 ASP 197 A THR 198 n 198 THR 198 A THR 199 n 199 THR 199 A ILE 200 n 200 ILE 200 A THR 201 n 201 THR 201 A LEU 202 n 202 LEU 202 A ASN 203 n 203 ASN 203 A VAL 204 n 204 VAL 204 A LEU 205 n 205 LEU 205 A ALA 206 n 206 ALA 206 A TRP 207 n 207 TRP 207 A LEU 208 n 208 LEU 208 A TYR 209 n 209 TYR 209 A ALA 210 n 210 ALA 210 A ALA 211 n 211 ALA 211 A VAL 212 n 212 VAL 212 A ILE 213 n 213 ILE 213 A ASN 214 n 214 ASN 214 A GLY 215 n 215 GLY 215 A ASP 216 n 216 ASP 216 A ARG 217 n 217 ARG 217 A TRP 218 n 218 TRP 218 A PHE 219 n 219 PHE 219 A LEU 220 n 220 LEU 220 A ASN 221 n 221 ASN 221 A ARG 222 n 222 ARG 222 A PHE 223 n 223 PHE 223 A THR 224 n 224 THR 224 A THR 225 n 225 THR 225 A THR 226 n 226 THR 226 A LEU 227 n 227 LEU 227 A ASN 228 n 228 ASN 228 A ASP 229 n 229 ASP 229 A PHE 230 n 230 PHE 230 A ASN 231 n 231 ASN 231 A LEU 232 n 232 LEU 232 A VAL 233 n 233 VAL 233 A ALA 234 n 234 ALA 234 A MET 235 n 235 MET 235 A LYS 236 n 236 LYS 236 A TYR 237 n 237 TYR 237 A ASN 238 n 238 ASN 238 A TYR 239 n 239 TYR 239 A GLU 240 n 240 GLU 240 A PRO 241 n 241 PRO 241 A LEU 242 n 242 LEU 242 A THR 243 n 243 THR 243 A GLN 244 n 244 GLN 244 A ASP 245 n 245 ASP 245 A HIS 246 n 246 HIS 246 A VAL 247 n 247 VAL 247 A ASP 248 n 248 ASP 248 A ILE 249 n 249 ILE 249 A LEU 250 n 250 LEU 250 A GLY 251 n 251 GLY 251 A PRO 252 n 252 PRO 252 A LEU 253 n 253 LEU 253 A SER 254 n 254 SER 254 A ALA 255 n 255 ALA 255 A GLN 256 n 256 GLN 256 A THR 257 n 257 THR 257 A GLY 258 n 258 GLY 258 A ILE 259 n 259 ILE 259 A ALA 260 n 260 ALA 260 A VAL 261 n 261 VAL 261 A LEU 262 n 262 LEU 262 A ASP 263 n 263 ASP 263 A MET 264 n 264 MET 264 A CYS 265 n 265 CYS 265 A ALA 266 n 266 ALA 266 A ALA 267 n 267 ALA 267 A LEU 268 n 268 LEU 268 A LYS 269 n 269 LYS 269 A GLU 270 n 270 GLU 270 A LEU 271 n 271 LEU 271 A LEU 272 n 272 LEU 272 A GLN 273 n 273 GLN 273 A ASN 274 n 274 ASN 274 A GLY 275 n 275 GLY 275 A MET 276 n 276 MET 276 A ASN 277 n 277 ASN 277 A GLY 278 n 278 GLY 278 A ARG 279 n 279 ARG 279 A THR 280 n 280 THR 280 A ILE 281 n 281 ILE 281 A LEU 282 n 282 LEU 282 A GLY 283 n 283 GLY 283 A SER 284 n 284 SER 284 A THR 285 n 285 THR 285 A ILE 286 n 286 ILE 286 A LEU 287 n 287 LEU 287 A GLU 288 n 288 GLU 288 A ASP 289 n 289 ASP 289 A GLU 290 n 290 GLU 290 A PHE 291 n 291 PHE 291 A THR 292 n 292 THR 292 A PRO 293 n 293 PRO 293 A PHE 294 n 294 PHE 294 A ASP 295 n 295 ASP 295 A VAL 296 n 296 VAL 296 A VAL 297 n 297 VAL 297 A ARG 298 n 298 ARG 298 A GLN 299 n 299 GLN 299 A CYS 300 n 300 CYS 300 A SER 301 n 301 SER 301 A GLY 302 n 302 GLY 302 A VAL 303 n 303 VAL 303 A THR 304 n 304 THR 304 A PHE 305 n 305 PHE 305 A GLN 306 n 306 GLN 306 A author_and_software_defined_assembly PISA 2 dimeric 2470 -8 26700 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 75 A O LEU 75 A N VAL 68 A N VAL 68 A O LEU 67 A O LEU 67 A N THR 21 A N THR 21 A N VAL 20 A N VAL 20 A O LEU 27 A O LEU 27 A N LEU 32 A N LEU 32 A O THR 35 A O THR 35 A N VAL 36 A N VAL 36 A O LEU 89 A O LEU 89 A O LEU 86 A O LEU 86 A N GLN 83 A N GLN 83 A N LYS 100 A N LYS 100 A O VAL 157 A O VAL 157 A O SER 158 A O SER 158 A N ASN 151 A N ASN 151 A O PHE 150 A O PHE 150 A N SER 113 A N SER 113 A N ALA 116 A N ALA 116 A O SER 123 A O SER 123 A N LYS 100 A N LYS 100 A O VAL 157 A O VAL 157 A N MET 165 A N MET 165 A O ALA 173 A O ALA 173 1 A HOH 704 C HOH 1 A A O O HOH HOH 535 668 2.15 1 A TYR 154 0.120 SIDE CHAIN 1 3.60 0.50 120.30 123.90 A A A NE CZ NH1 ARG ARG ARG 60 60 60 N 1 -3.45 0.50 120.30 116.85 A A A NE CZ NH2 ARG ARG ARG 60 60 60 N 1 -21.79 0.60 121.00 99.21 A A A CB CG CD2 TYR TYR TYR 154 154 154 N 1 9.54 1.10 117.90 127.44 A A A CD1 CG CD2 TYR TYR TYR 154 154 154 N 1 -9.79 0.60 121.00 111.21 A A A CB CG CD1 TYR TYR TYR 154 154 154 N 1 -6.32 0.80 121.30 114.98 A A A CG CD1 CE1 TYR TYR TYR 154 154 154 N 1 -14.16 0.80 121.30 107.14 A A A CG CD2 CE2 TYR TYR TYR 154 154 154 N 1 3.18 0.50 120.30 123.48 A A A NE CZ NH1 ARG ARG ARG 217 217 217 N 1 A A CG CD2 TYR TYR 154 154 0.197 0.013 1.387 1.584 N 1 A A CG CD1 TYR TYR 154 154 -0.334 0.013 1.387 1.053 N 1 A A O O HOH HOH 689 689 1.35 1_555 2_555 1 A ASP 33 52.85 -122.24 1 A ASN 51 -153.98 64.06 1 A ASN 84 45.01 -116.41 1 A HIS 164 -130.67 -39.27 44.062 -2.71 0.00 1.59 1.34 0.00 0.49 0.964 0.937 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.25152 0.19222 0.19512 2.00 43.83 1501 28787 5.0 98.07 4.888 0.128 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.149 0.155 0.80 0.80 1.20 SARS-CoV main protease MAXIMUM LIKELIHOOD MASK 2.00 43.83 214 2624 39 0 2371 0.018 0.019 2467 0.002 0.020 2219 1.908 1.965 3351 1.197 3.000 5155 7.345 5.000 307 35.724 24.352 108 16.138 15.000 393 16.862 15.000 12 0.137 0.200 378 0.010 0.021 2778 0.002 0.020 518 3.974 4.216 1228 3.970 4.215 1227 5.142 6.302 1535 5.141 6.303 1536 4.625 4.644 1239 4.623 4.645 1240 6.635 6.791 1814 8.072 50.376 2677 8.071 50.371 2678 0.369 0.296 2.052 114 2138 20 98.30 2.00 43.83 5N5O 30329 0.997 0.060 0.039 1 10.5 3.3 98.3 0.507 2.00 2.11 2.4 4358 0.804 0.331 1 3.3 97.4 refinement REFMAC 5.8.0158 data scaling SCALA phasing MOLREP N Replicase polyprotein 1ab (E.C.3.4.19.12,3.4.22.69,3.4.22.-,2.7.7.48,3.6.4.12,3.6.4.13,2.1.1.-,3.1.13.-,3.1.-.-) Structure of SARS coronavirus main protease in complex with the alpha-ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3-cyclopropylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-yl)butanamide (Cinnamoyl-cyclopropylalanine-GlnLactam-CO-CO-NH-benzyl) 1 N N 2 N N 3 N N A SER 10 A SER 10 HELX_P A GLY 15 A GLY 15 1 AA1 6 A HIS 41 A HIS 41 HELX_P A CYS 44 A CYS 44 5 AA2 4 A ALA 46 A ALA 46 HELX_P A LEU 50 A LEU 50 5 AA3 5 A ASN 53 A ASN 53 HELX_P A ARG 60 A ARG 60 1 AA4 8 A SER 62 A SER 62 HELX_P A PHE 66 A PHE 66 5 AA5 5 A ILE 200 A ILE 200 HELX_P A ASN 214 A ASN 214 1 AA6 15 A THR 226 A THR 226 HELX_P A TYR 237 A TYR 237 1 AA7 12 A THR 243 A THR 243 HELX_P A LEU 250 A LEU 250 1 AA8 8 A LEU 250 A LEU 250 HELX_P A GLY 258 A GLY 258 1 AA9 9 A ALA 260 A ALA 260 HELX_P A GLY 275 A GLY 275 1 AB1 16 A THR 292 A THR 292 HELX_P A CYS 300 A CYS 300 1 AB2 9 covale 1.839 none A CYS 145 A SG CYS 145 1_555 A 8O5 401 B C57 8O5 1_555 HYDROLASE Viral protease, coronavirus, alpha-ketoamide, inhibitor, Hydrolase R1AB_CVHSA UNP 1 3241 P0C6X7 SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIRKSNHSFLVQAGNVQLRVIGH SMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFC YMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYE PLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ 3241 3546 5N5O 1 306 P0C6X7 A 1 1 306 7 5 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel A VAL 73 A VAL 73 A LEU 75 A LEU 75 A LEU 67 A LEU 67 A ALA 70 A ALA 70 A MET 17 A MET 17 A CYS 22 A CYS 22 A THR 25 A THR 25 A LEU 32 A LEU 32 A THR 35 A THR 35 A PRO 39 A PRO 39 A LEU 86 A LEU 86 A VAL 91 A VAL 91 A VAL 77 A VAL 77 A GLN 83 A GLN 83 A LYS 100 A LYS 100 A PHE 103 A PHE 103 A CYS 156 A CYS 156 A GLU 166 A GLU 166 A VAL 148 A VAL 148 A ASP 153 A ASP 153 A THR 111 A THR 111 A TYR 118 A TYR 118 A SER 121 A SER 121 A ALA 129 A ALA 129 A LYS 100 A LYS 100 A PHE 103 A PHE 103 A CYS 156 A CYS 156 A GLU 166 A GLU 166 A HIS 172 A HIS 172 A THR 175 A THR 175 binding site for residue 8O5 A 401 A 8O5 401 Software 15 A THR 26 A THR 26 15 1_555 A HIS 41 A HIS 41 15 1_555 A PHE 140 A PHE 140 15 1_555 A ASN 142 A ASN 142 15 1_555 A GLY 143 A GLY 143 15 1_555 A SER 144 A SER 144 15 1_555 A CYS 145 A CYS 145 15 1_555 A HIS 163 A HIS 163 15 1_555 A HIS 164 A HIS 164 15 1_555 A MET 165 A MET 165 15 1_555 A GLU 166 A GLU 166 15 1_555 A GLN 189 A GLN 189 15 1_555 A HOH 575 C HOH 15 1_555 A HOH 601 C HOH 15 1_555 A HOH 621 C HOH 15 1_555 5 C 1 2 1