0.028246 0.000000 0.000000 0.000000 0.014567 0.000000 0.000000 0.000000 0.010999 0.00000 0.00000 0.00000 Companon, I. Martinez-Saez, N. Castro-Lopez, J. Jimenez-Barbero, J. Bernardes, G.J.L. Busto, J.H. Avenoza, A. Jimenez-Oses, G. Hurtado-Guerrero, R. Peregrina, J.M. Corzana, F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 35.403 68.648 90.917 C8 H15 N O6 221.208 2-acetamido-2-deoxy-alpha-D-galactopyranose N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE D-saccharide, alpha linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C4 H9 N O2 S 135.185 n beta-Methyl-Cysteine L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 S C N 3 N O N 4 R C N 5 N N N 6 R C N 7 N O N 8 R C N 9 N O N 10 R C N 11 N C N 12 N O N 13 N C N 14 N O N 15 N C N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N N N 32 S C N 33 N C N 34 N O N 35 N C N 36 N O N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N N N 45 S C N 46 N C N 47 N O N 48 N C N 49 N C N 50 N C N 51 N N N 52 N C N 53 N N N 54 N N N 55 N O N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N N N 72 S C N 73 N C N 74 N O N 75 N C N 76 N C N 77 N O N 78 N N N 79 N O N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N O N 95 N O N 96 N O N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N O N 105 N C N 106 R C N 107 N N N 108 R C N 109 N S N 110 N C N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N N N 122 R C N 123 N C N 124 N O N 125 N C N 126 N S N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N C N 136 N O N 137 N C N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N O N 153 N N N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N N N 166 S C N 167 N C N 168 N O N 169 N C N 170 N C N 171 N C N 172 N O N 173 N O N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 N C N 186 N C N 187 N O N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C Y 199 N C Y 200 N N Y 201 N C Y 202 N C Y 203 N N N 204 N O N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N O N 216 N H N 217 N H N 218 N N N 219 S C N 220 N C N 221 N O N 222 S C N 223 N C N 224 N C N 225 N C N 226 N O N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N N N 241 S C N 242 N C N 243 N O N 244 N C N 245 N C N 246 N C N 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C N 267 N C N 268 N C N 269 N C N 270 N N N 271 N O N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N S N 294 N C N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 N H N 309 N H N 310 N N N 311 S C N 312 N C N 313 N O N 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C N 338 N C N 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C N 355 N O N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N N N 365 S C N 366 N C N 367 N O N 368 R C N 369 N O N 370 N C N 371 N O N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C Y 386 N C Y 387 N C Y 388 N C Y 389 N N Y 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C N 437 N C N 438 N C N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N doub N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N doub N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N doub N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing Y 195 N sing Y 196 N doub Y 197 N doub N 198 N sing Y 199 N sing N 200 N sing Y 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N doub N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing Y 305 N doub Y 306 N sing Y 307 N sing N 308 N sing Y 309 N doub N 310 N sing Y 311 N doub N 312 N sing Y 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing Y 374 N doub Y 375 N sing Y 376 N sing N 377 N sing Y 378 N doub Y 379 N sing Y 380 N sing N 381 N sing Y 382 N sing Y 383 N doub N 384 N sing Y 385 N doub N 386 N sing Y 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N doub N 407 N sing Y 408 N doub N 409 N sing Y 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing US J.Am.Chem.Soc. JACSAT 1520-5126 141 4063 4072 10.1021/jacs.8b13503 30726084 Structure-Based Design of Potent Tumor-Associated Antigens: Modulation of Peptide Presentation by Single-Atom O/S or O/Se Substitutions at the Glycosidic Linkage. 2019 0000-0001-5421-8513 0000-0003-0105-4337 0000-0002-0768-8309 0000-0003-3778-7065 0000-0002-3122-9401 0000-0002-6087-6851 0000-0001-6594-8917 0000-0001-5597-8127 10.2210/pdb5n7b/pdb pdb_00005n7b 100 1 PIXEL 2016-09-27 DECTRIS PILATUS3 S 6M SINGLE WAVELENGTH M x-ray 1 0.979 1.0 XALOC ALBA 0.979 SYNCHROTRON ALBA BEAMLINE XALOC Please follow the numbering described in the PDB entry 5A2K 25758.338 Ig heavy chain V-III region J606,Ig lambda-1 chain V region S43 1 man polymer 670.782 APD(CG6)RP(NH2) peptide 1 syn polymer 62.068 1,2-ETHANEDIOL 7 syn non-polymer 221.208 2-acetamido-2-deoxy-alpha-D-galactopyranose 1 man non-polymer 18.015 water 179 nat water no no QVQLQESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSS VYLQMNNLRAEDTGIYYCTGVGQFAYWGQGTTVTVSSSSGGGGSGGGGGSSGSSDIVVTQESALTTSPGETVTLTCRSST GAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKL TVLG QVQLQESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSS VYLQMNNLRAEDTGIYYCTGVGQFAYWGQGTTVTVSSSSGGGGSGGGGGSSGSSDIVVTQESALTTSPGETVTLTCRSST GAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKL TVLG H polypeptide(L) no yes APD(CG6)RP(NH2) APDCRPX I polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mouse sample 1 116 10090 Mus musculus 644223 Komagataella phaffii GS115 Plasmid Biological sequence pPICZalphaA Mouse sample 117 244 10090 Mus musculus 644223 Komagataella phaffii GS115 Plasmid Biological sequence pPICZalphaA 1 2.09 41.15 VAPOR DIFFUSION, SITTING DROP 20% PEG 3350, 0.2 M disodium hydrogen phosphate 291 citation citation_author pdbx_database_proc atom_site chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn repository Initial release Carbohydrate remediation repository Remediation Data collection Database references Atomic model Data collection Derived calculations Structure summary Data collection Database references Derived calculations Refinement description Structure summary 1 0 2018-06-27 1 1 2019-07-10 2 0 2020-07-29 2 1 2024-01-17 _citation.country _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _atom_site.auth_atom_id _atom_site.label_atom_id _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag Spain DGalpNAca N-acetyl-a-D-galactopyranosamine a-D-GalpNAc GalNAc N PDBE Y PDBE 2017-02-20 REL REL EDO 1,2-ETHANEDIOL A2G 2-acetamido-2-deoxy-alpha-D-galactopyranose HOH water 32630 synthetic construct sample 1 7 5A2I PDB experimental model EDO 2 3 EDO EDO 1201 H EDO 3 3 EDO EDO 1202 H EDO 4 3 EDO EDO 1203 H EDO 5 3 EDO EDO 1204 H EDO 6 3 EDO EDO 1205 H EDO 7 3 EDO EDO 1206 H EDO 8 3 EDO EDO 1207 H DRG 901 4 A2G A2G 101 I HOH 63 5 HOH HOH 1301 H HOH 30 5 HOH HOH 1302 H HOH 98 5 HOH HOH 1303 H HOH 37 5 HOH HOH 1304 H HOH 57 5 HOH HOH 1305 H HOH 103 5 HOH HOH 1306 H HOH 210 5 HOH HOH 1307 H HOH 96 5 HOH HOH 1308 H HOH 127 5 HOH HOH 1309 H HOH 119 5 HOH HOH 1310 H HOH 19 5 HOH HOH 1311 H HOH 96 5 HOH HOH 1312 H HOH 66 5 HOH HOH 1313 H HOH 156 5 HOH HOH 1314 H HOH 11 5 HOH HOH 1315 H HOH 8 5 HOH HOH 1316 H HOH 56 5 HOH HOH 1317 H HOH 160 5 HOH HOH 1318 H HOH 78 5 HOH HOH 1319 H HOH 107 5 HOH HOH 1320 H HOH 44 5 HOH HOH 1321 H HOH 13 5 HOH HOH 1322 H HOH 39 5 HOH HOH 1323 H HOH 58 5 HOH HOH 1324 H HOH 79 5 HOH HOH 1325 H HOH 73 5 HOH HOH 1326 H HOH 85 5 HOH HOH 1327 H HOH 189 5 HOH HOH 1328 H HOH 74 5 HOH HOH 1329 H HOH 148 5 HOH HOH 1330 H HOH 18 5 HOH HOH 1331 H HOH 12 5 HOH HOH 1332 H HOH 100 5 HOH HOH 1333 H HOH 29 5 HOH HOH 1334 H HOH 90 5 HOH HOH 1335 H HOH 93 5 HOH HOH 1336 H HOH 32 5 HOH HOH 1337 H HOH 118 5 HOH HOH 1338 H HOH 175 5 HOH HOH 1339 H HOH 69 5 HOH HOH 1340 H HOH 112 5 HOH HOH 1341 H HOH 25 5 HOH HOH 1342 H HOH 109 5 HOH HOH 1343 H HOH 115 5 HOH HOH 1344 H HOH 20 5 HOH HOH 1345 H HOH 50 5 HOH HOH 1346 H HOH 43 5 HOH HOH 1347 H HOH 64 5 HOH HOH 1348 H HOH 92 5 HOH HOH 1349 H HOH 101 5 HOH HOH 1350 H HOH 14 5 HOH HOH 1351 H HOH 41 5 HOH HOH 1352 H HOH 17 5 HOH HOH 1353 H HOH 23 5 HOH HOH 1354 H HOH 53 5 HOH HOH 1355 H HOH 187 5 HOH HOH 1356 H HOH 95 5 HOH HOH 1357 H HOH 62 5 HOH HOH 1358 H HOH 3 5 HOH HOH 1359 H HOH 28 5 HOH HOH 1360 H HOH 102 5 HOH HOH 1361 H HOH 176 5 HOH HOH 1362 H HOH 170 5 HOH HOH 1363 H HOH 34 5 HOH HOH 1364 H HOH 224 5 HOH HOH 1365 H HOH 56 5 HOH HOH 1366 H HOH 51 5 HOH HOH 1367 H HOH 131 5 HOH HOH 1368 H HOH 24 5 HOH HOH 1369 H HOH 54 5 HOH HOH 1370 H HOH 38 5 HOH HOH 1371 H HOH 75 5 HOH HOH 1372 H HOH 129 5 HOH HOH 1373 H HOH 87 5 HOH HOH 1374 H HOH 117 5 HOH HOH 1375 H HOH 2 5 HOH HOH 1376 H HOH 64 5 HOH HOH 1377 H HOH 66 5 HOH HOH 1378 H HOH 49 5 HOH HOH 1379 H HOH 95 5 HOH HOH 1380 H HOH 100 5 HOH HOH 1381 H HOH 26 5 HOH HOH 1382 H HOH 199 5 HOH HOH 1383 H HOH 169 5 HOH HOH 1384 H HOH 88 5 HOH HOH 1385 H HOH 137 5 HOH HOH 1386 H HOH 80 5 HOH HOH 1387 H HOH 21 5 HOH HOH 1388 H HOH 146 5 HOH HOH 1389 H HOH 91 5 HOH HOH 1390 H HOH 104 5 HOH HOH 1391 H HOH 76 5 HOH HOH 1392 H HOH 143 5 HOH HOH 1393 H HOH 157 5 HOH HOH 1394 H HOH 35 5 HOH HOH 1395 H HOH 68 5 HOH HOH 1396 H HOH 162 5 HOH HOH 1397 H HOH 1 5 HOH HOH 1398 H HOH 6 5 HOH HOH 1399 H HOH 40 5 HOH HOH 1400 H HOH 57 5 HOH HOH 1401 H HOH 16 5 HOH HOH 1402 H HOH 105 5 HOH HOH 1403 H HOH 38 5 HOH HOH 1404 H HOH 106 5 HOH HOH 1405 H HOH 5 5 HOH HOH 1406 H HOH 67 5 HOH HOH 1407 H HOH 11 5 HOH HOH 1408 H HOH 103 5 HOH HOH 1409 H HOH 27 5 HOH HOH 1410 H HOH 15 5 HOH HOH 1411 H HOH 27 5 HOH HOH 1412 H HOH 89 5 HOH HOH 1413 H HOH 10 5 HOH HOH 1414 H HOH 60 5 HOH HOH 1415 H HOH 42 5 HOH HOH 1416 H HOH 59 5 HOH HOH 1417 H HOH 47 5 HOH HOH 1418 H HOH 45 5 HOH HOH 1419 H HOH 22 5 HOH HOH 1420 H HOH 97 5 HOH HOH 1421 H HOH 97 5 HOH HOH 1422 H HOH 98 5 HOH HOH 1423 H HOH 40 5 HOH HOH 1424 H HOH 94 5 HOH HOH 1425 H HOH 191 5 HOH HOH 1426 H HOH 124 5 HOH HOH 1427 H HOH 70 5 HOH HOH 1428 H HOH 62 5 HOH HOH 1429 H HOH 111 5 HOH HOH 1430 H HOH 83 5 HOH HOH 1431 H HOH 197 5 HOH HOH 1432 H HOH 33 5 HOH HOH 1433 H HOH 95 5 HOH HOH 1434 H HOH 217 5 HOH HOH 1435 H HOH 180 5 HOH HOH 1436 H HOH 34 5 HOH HOH 1437 H HOH 31 5 HOH HOH 1438 H HOH 179 5 HOH HOH 1439 H HOH 234 5 HOH HOH 1440 H HOH 71 5 HOH HOH 1441 H HOH 82 5 HOH HOH 1442 H HOH 4 5 HOH HOH 1443 H HOH 16 5 HOH HOH 1444 H HOH 86 5 HOH HOH 1445 H HOH 85 5 HOH HOH 1446 H HOH 206 5 HOH HOH 1447 H HOH 92 5 HOH HOH 1448 H HOH 105 5 HOH HOH 1449 H HOH 102 5 HOH HOH 1450 H HOH 91 5 HOH HOH 1451 H HOH 228 5 HOH HOH 1452 H HOH 101 5 HOH HOH 1453 H HOH 133 5 HOH HOH 1454 H HOH 93 5 HOH HOH 1455 H HOH 59 5 HOH HOH 1456 H HOH 137 5 HOH HOH 1457 H HOH 86 5 HOH HOH 1458 H HOH 222 5 HOH HOH 1459 H HOH 94 5 HOH HOH 1460 H HOH 121 5 HOH HOH 1461 H HOH 87 5 HOH HOH 1462 H HOH 136 5 HOH HOH 1463 H HOH 55 5 HOH HOH 1464 H HOH 144 5 HOH HOH 1465 H HOH 99 5 HOH HOH 1466 H HOH 226 5 HOH HOH 1467 H HOH 94 5 HOH HOH 1468 H HOH 90 5 HOH HOH 1469 H HOH 89 5 HOH HOH 201 I HOH 88 5 HOH HOH 202 I HOH 141 5 HOH HOH 203 I HOH 84 5 HOH HOH 204 I HOH 48 5 HOH HOH 205 I HOH 7 5 HOH HOH 206 I HOH 233 5 HOH HOH 207 I HOH 52 5 HOH HOH 208 I HOH 109 5 HOH HOH 209 I HOH 241 5 HOH HOH 210 I GLN 1 n 1 GLN 1 H VAL 2 n 2 VAL 2 H GLN 3 n 3 GLN 3 H LEU 4 n 4 LEU 4 H GLN 5 n 5 GLN 5 H GLU 6 n 6 GLU 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H GLY 9 n 9 GLY 9 H GLY 10 n 10 GLY 10 H LEU 11 n 11 LEU 11 H VAL 12 n 12 VAL 12 H GLN 13 n 13 GLN 13 H PRO 14 n 14 PRO 14 H GLY 15 n 15 GLY 15 H GLY 16 n 16 GLY 16 H SER 17 n 17 SER 17 H MET 18 n 18 MET 18 H LYS 19 n 19 LYS 19 H LEU 20 n 20 LEU 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H VAL 23 n 23 VAL 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H PHE 27 n 27 PHE 27 H THR 28 n 28 THR 28 H PHE 29 n 29 PHE 29 H SER 30 n 30 SER 30 H ASN 31 n 31 ASN 31 H TYR 32 n 32 TYR 32 H TRP 33 n 33 TRP 33 H MET 34 n 34 MET 34 H ASN 35 n 35 ASN 35 H TRP 36 n 36 TRP 36 H VAL 37 n 37 VAL 37 H ARG 38 n 38 ARG 38 H GLN 39 n 39 GLN 39 H SER 40 n 40 SER 40 H PRO 41 n 41 PRO 41 H GLU 42 n 42 GLU 42 H LYS 43 n 43 LYS 43 H GLY 44 n 44 GLY 44 H LEU 45 n 45 LEU 45 H GLU 46 n 46 GLU 46 H TRP 47 n 47 TRP 47 H VAL 48 n 48 VAL 48 H ALA 49 n 49 ALA 49 H GLU 50 n 50 GLU 50 H ILE 51 n 51 ILE 51 H ARG 52 n 52 ARG 52 H LEU 53 n 53 LEU 53 H LYS 54 n 54 LYS 54 H SER 55 n 55 SER 55 H ASN 56 n 56 ASN 56 H ASN 57 n 57 ASN 57 H TYR 58 n 58 TYR 58 H ALA 59 n 59 ALA 59 H THR 60 n 60 THR 60 H HIS 61 n 61 HIS 61 H TYR 62 n 62 TYR 62 H ALA 63 n 63 ALA 63 H GLU 64 n 64 GLU 64 H SER 65 n 65 SER 65 H VAL 66 n 66 VAL 66 H LYS 67 n 67 LYS 67 H GLY 68 n 68 GLY 68 H ARG 69 n 69 ARG 69 H PHE 70 n 70 PHE 70 H THR 71 n 71 THR 71 H ILE 72 n 72 ILE 72 H SER 73 n 73 SER 73 H ARG 74 n 74 ARG 74 H ASP 75 n 75 ASP 75 H ASP 76 n 76 ASP 76 H SER 77 n 77 SER 77 H LYS 78 n 78 LYS 78 H SER 79 n 79 SER 79 H SER 80 n 80 SER 80 H VAL 81 n 81 VAL 81 H TYR 82 n 82 TYR 82 H LEU 83 n 83 LEU 83 H GLN 84 n 84 GLN 84 H MET 85 n 85 MET 85 H ASN 86 n 86 ASN 86 H ASN 87 n 87 ASN 87 H LEU 88 n 88 LEU 88 H ARG 89 n 89 ARG 89 H ALA 90 n 90 ALA 90 H GLU 91 n 91 GLU 91 H ASP 92 n 92 ASP 92 H THR 93 n 93 THR 93 H GLY 94 n 94 GLY 94 H ILE 95 n 95 ILE 95 H TYR 96 n 96 TYR 96 H TYR 97 n 97 TYR 97 H CYS 98 n 98 CYS 98 H THR 99 n 99 THR 99 H GLY 100 n 100 GLY 100 H VAL 101 n 101 VAL 101 H GLY 102 n 102 GLY 102 H GLN 103 n 103 GLN 103 H PHE 104 n 104 PHE 104 H ALA 107 n 105 ALA 107 H TYR 108 n 106 TYR 108 H TRP 109 n 107 TRP 109 H GLY 110 n 108 GLY 110 H GLN 111 n 109 GLN 111 H GLY 112 n 110 GLY 112 H THR 113 n 111 THR 113 H THR 114 n 112 THR 114 H VAL 115 n 113 VAL 115 H THR 116 n 114 THR 116 H VAL 117 n 115 VAL 117 H SER 118 n 116 SER 118 H n 117 990 H n 118 991 H n 119 992 H n 120 993 H n 121 994 H n 122 995 H n 123 996 H n 124 997 H n 125 998 H n 126 999 H n 127 1000 H n 128 1001 H n 129 1002 H n 130 1003 H n 131 1004 H n 132 1005 H n 133 1006 H n 134 1007 H ASP 1008 n 135 ASP 1008 H ILE 1009 n 136 ILE 1009 H VAL 1010 n 137 VAL 1010 H VAL 1011 n 138 VAL 1011 H THR 1012 n 139 THR 1012 H GLN 1013 n 140 GLN 1013 H GLU 1014 n 141 GLU 1014 H SER 1015 n 142 SER 1015 H ALA 1016 n 143 ALA 1016 H LEU 1017 n 144 LEU 1017 H THR 1018 n 145 THR 1018 H THR 1019 n 146 THR 1019 H SER 1020 n 147 SER 1020 H PRO 1021 n 148 PRO 1021 H GLY 1022 n 149 GLY 1022 H GLU 1023 n 150 GLU 1023 H THR 1024 n 151 THR 1024 H VAL 1025 n 152 VAL 1025 H THR 1026 n 153 THR 1026 H LEU 1027 n 154 LEU 1027 H THR 1028 n 155 THR 1028 H CYS 1029 n 156 CYS 1029 H ARG 1030 n 157 ARG 1030 H SER 1031 n 158 SER 1031 H SER 1032 n 159 SER 1032 H THR 1033 n 160 THR 1033 H GLY 1034 n 161 GLY 1034 H ALA 1035 n 162 ALA 1035 H VAL 1036 n 163 VAL 1036 H THR 1037 n 164 THR 1037 H THR 1038 n 165 THR 1038 H SER 1039 n 166 SER 1039 H ASN 1040 n 167 ASN 1040 H TYR 1041 n 168 TYR 1041 H ALA 1042 n 169 ALA 1042 H ASN 1043 n 170 ASN 1043 H TRP 1044 n 171 TRP 1044 H VAL 1045 n 172 VAL 1045 H GLN 1046 n 173 GLN 1046 H GLU 1047 n 174 GLU 1047 H LYS 1048 n 175 LYS 1048 H PRO 1049 n 176 PRO 1049 H ASP 1050 n 177 ASP 1050 H HIS 1051 n 178 HIS 1051 H LEU 1052 n 179 LEU 1052 H PHE 1053 n 180 PHE 1053 H THR 1054 n 181 THR 1054 H GLY 1055 n 182 GLY 1055 H LEU 1056 n 183 LEU 1056 H ILE 1057 n 184 ILE 1057 H GLY 1058 n 185 GLY 1058 H GLY 1059 n 186 GLY 1059 H THR 1060 n 187 THR 1060 H ASN 1061 n 188 ASN 1061 H ASN 1062 n 189 ASN 1062 H ARG 1063 n 190 ARG 1063 H ALA 1064 n 191 ALA 1064 H PRO 1065 n 192 PRO 1065 H GLY 1066 n 193 GLY 1066 H VAL 1067 n 194 VAL 1067 H PRO 1068 n 195 PRO 1068 H ALA 1069 n 196 ALA 1069 H ARG 1070 n 197 ARG 1070 H PHE 1071 n 198 PHE 1071 H SER 1072 n 199 SER 1072 H GLY 1073 n 200 GLY 1073 H SER 1074 n 201 SER 1074 H LEU 1075 n 202 LEU 1075 H ILE 1076 n 203 ILE 1076 H GLY 1077 n 204 GLY 1077 H ASP 1078 n 205 ASP 1078 H LYS 1079 n 206 LYS 1079 H ALA 1080 n 207 ALA 1080 H ALA 1081 n 208 ALA 1081 H LEU 1082 n 209 LEU 1082 H THR 1083 n 210 THR 1083 H ILE 1084 n 211 ILE 1084 H THR 1085 n 212 THR 1085 H GLY 1086 n 213 GLY 1086 H ALA 1087 n 214 ALA 1087 H GLN 1088 n 215 GLN 1088 H THR 1089 n 216 THR 1089 H GLU 1090 n 217 GLU 1090 H ASP 1091 n 218 ASP 1091 H GLU 1092 n 219 GLU 1092 H ALA 1093 n 220 ALA 1093 H ILE 1094 n 221 ILE 1094 H TYR 1095 n 222 TYR 1095 H PHE 1096 n 223 PHE 1096 H CYS 1097 n 224 CYS 1097 H ALA 1098 n 225 ALA 1098 H LEU 1099 n 226 LEU 1099 H TRP 1100 n 227 TRP 1100 H TYR 1101 n 228 TYR 1101 H SER 1102 n 229 SER 1102 H ASN 1103 n 230 ASN 1103 H HIS 1104 n 231 HIS 1104 H TRP 1105 n 232 TRP 1105 H VAL 1106 n 233 VAL 1106 H PHE 1107 n 234 PHE 1107 H GLY 1108 n 235 GLY 1108 H GLY 1109 n 236 GLY 1109 H GLY 1110 n 237 GLY 1110 H THR 1111 n 238 THR 1111 H LYS 1112 n 239 LYS 1112 H LEU 1113 n 240 LEU 1113 H THR 1114 n 241 THR 1114 H VAL 1115 n 242 VAL 1115 H LEU 1116 n 243 LEU 1116 H GLY 1117 n 244 GLY 1117 H DRG 901 n 1 ALA 1 I DRG 901 n 2 PRO 2 I DRG 901 n 3 ASP 3 I DRG 901 n 4 CG6 4 I DRG 901 n 5 ARG 5 I DRG 901 n 6 PRO 6 I DRG 901 n 7 NH2 7 I author_and_software_defined_assembly PISA 2 dimeric 2550 22 10410 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 H N SER 7 A N SER 7 H O SER 21 A O SER 21 H N MET 18 A N MET 18 H O MET 85 A O MET 85 H O TYR 82 A O TYR 82 H N SER 73 A N SER 73 H N GLY 10 A N GLY 10 H O THR 116 A O THR 114 H O VAL 115 A O VAL 113 H N GLY 94 A N GLY 94 H O TYR 97 A O TYR 97 H N VAL 37 A N VAL 37 H N ARG 38 A N ARG 38 H O GLU 46 A O GLU 46 H N GLU 50 A N GLU 50 H O HIS 61 A O HIS 61 H N GLY 10 A N GLY 10 H O THR 116 A O THR 114 H O VAL 115 A O VAL 113 H N GLY 94 A N GLY 94 H N GLY 100 A N GLY 100 H O TYR 108 A O TYR 106 H N THR 1012 A N THR 139 H O ARG 1030 A O ARG 157 H N LEU 1027 A N LEU 154 H O LEU 1082 A O LEU 209 H O THR 1083 A O THR 210 H N SER 1072 A N SER 199 H N THR 1019 A N THR 146 H O THR 1114 A O THR 241 H O LEU 1113 A O LEU 240 H N ALA 1093 A N ALA 220 H O ILE 1094 A O ILE 221 H N GLU 1047 A N GLU 174 H N GLN 1046 A N GLN 173 H O THR 1054 A O THR 181 H N GLY 1058 A N GLY 185 H O ASN 1062 A O ASN 189 H N THR 1019 A N THR 146 H O THR 1114 A O THR 241 H O LEU 1113 A O LEU 240 H N ALA 1093 A N ALA 220 H N TYR 1101 A N TYR 228 H O HIS 1104 A O HIS 231 1 H SER 990 A SER 117 1 Y 1 H SER 991 A SER 118 1 Y 1 H SER 992 A SER 119 1 Y 1 H GLY 993 A GLY 120 1 Y 1 H GLY 994 A GLY 121 1 Y 1 H GLY 995 A GLY 122 1 Y 1 H GLY 996 A GLY 123 1 Y 1 H SER 997 A SER 124 1 Y 1 H GLY 998 A GLY 125 1 Y 1 H GLY 999 A GLY 126 1 Y 1 H GLY 1000 A GLY 127 1 Y 1 H GLY 1001 A GLY 128 1 Y 1 H GLY 1002 A GLY 129 1 Y 1 H SER 1003 A SER 130 1 Y 1 H SER 1004 A SER 131 1 Y 1 H GLY 1005 A GLY 132 1 Y 1 H SER 1006 A SER 133 1 Y 1 H SER 1007 A SER 134 1 Y 1 H H O O HOH HOH 1303 1361 0.46 1 H H O2 O EDO HOH 1205 1301 2.04 1 H H C N PHE ALA 104 107 1.66 1 3.30 0.50 120.30 123.60 H H H NE CZ NH1 ARG ARG ARG 52 52 52 N 1 4.50 0.50 120.30 124.80 H H H NE CZ NH1 ARG ARG ARG 69 69 69 N 1 -4.58 0.50 120.30 115.72 H H H NE CZ NH2 ARG ARG ARG 69 69 69 N 1 -11.51 1.40 123.60 112.09 I I I CD NE CZ ARG ARG ARG 5 5 5 A A A N 1 -23.94 1.40 123.60 99.66 I I I CD NE CZ ARG ARG ARG 5 5 5 B B B N 1 4.04 0.50 120.30 124.34 I I I NE CZ NH1 ARG ARG ARG 5 5 5 A A A N 1 -11.98 0.50 120.30 108.32 I I I NE CZ NH1 ARG ARG ARG 5 5 5 B B B N 1 -4.53 0.50 120.30 115.77 I I I NE CZ NH2 ARG ARG ARG 5 5 5 A A A N 1 11.32 0.50 120.30 131.62 I I I NE CZ NH2 ARG ARG ARG 5 5 5 B B B N 1 I I NE CZ ARG ARG 5 5 0.317 0.013 1.326 1.643 A A N 1 I I CZ NH1 ARG ARG 5 5 0.107 0.013 1.326 1.433 A A N 1 I I CZ NH1 ARG ARG 5 5 0.115 0.013 1.326 1.441 B B N 1 I I CZ NH2 ARG ARG 5 5 0.097 0.013 1.326 1.423 A A N 1 I I CZ NH2 ARG ARG 5 5 0.091 0.013 1.326 1.417 B B N 1 I I CA C PRO PRO 6 6 -0.132 0.020 1.524 1.392 A A N 1 I I CA C PRO PRO 6 6 -0.130 0.020 1.524 1.394 B B N 1 H ARG 52 -98.02 -155.33 1 H VAL 101 80.74 108.03 1 H THR 1060 73.76 -54.61 1 H ASN 1061 -145.21 22.52 1 H ALA 1093 179.73 171.73 1 H SER 1102 68.33 -59.81 1 H ASN 1103 -151.10 14.26 1 I PRO 2 A -79.91 -162.44 1 I PRO 2 B -79.61 -161.46 24.071 0.39 0.00 0.00 1.31 0.00 -1.70 0.965 0.954 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.21062 0.17606 0.17705 1.70 20 675 24415 2.7 99.85 2.411 0.077 RANDOM 1 THROUGHOUT MOLECULAR REPLACEMENT 0.109 0.106 0.80 0.80 1.20 5A2I 1.70 20 179 1991 43 0 1769 0.009 0.020 1947 0.006 0.020 1793 1.540 1.990 2647 1.450 3.029 4132 6.057 5.000 233 36.687 24.051 79 13.097 15.000 280 23.350 15.000 9 0.122 0.200 298 0.006 0.021 2172 0.001 0.020 453 1.269 2.138 919 1.269 2.137 917 2.002 3.195 1144 2.001 3.195 1144 1.819 2.509 1028 1.815 2.509 1028 2.928 3.653 1499 4.975 25.851 2064 4.976 25.860 2065 0.356 0.259 1.744 40 1761 20 100.00 1.7 20 5N7B 25141 0.999 0.035 1 13.0 6.3 99.9 1.70 1.79 2.4 0.867 0.317 1 6.4 100.0 refinement REFMAC 5.8.0155 data reduction XDS data scaling SCALA phasing MOLREP Molrep N Understanding the singular conformational landscape of the Tn antigens: Sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody 1 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 5 N N 5 N N H THR 28 A THR 28 HELX_P H TYR 32 A TYR 32 5 AA1 5 H LEU 53 A LEU 53 HELX_P H ASN 57 A ASN 57 5 AA2 5 H ASP 76 A ASP 76 HELX_P H LYS 78 A LYS 78 5 AA3 3 H ARG 89 A ARG 89 HELX_P H THR 93 A THR 93 5 AA4 5 H THR 1037 A THR 164 HELX_P H TYR 1041 A TYR 168 5 AA5 5 H GLN 1088 A GLN 215 HELX_P H GLU 1092 A GLU 219 5 AA6 5 disulf 2.066 H CYS 22 A SG CYS 22 1_555 H CYS 98 A SG CYS 98 1_555 disulf 2.075 H CYS 1029 A SG CYS 156 1_555 H CYS 1097 A SG CYS 224 1_555 covale 1.343 both A A I ASP 3 B C ASP 3 1_555 I CG6 4 B N CG6 4 1_555 covale 1.346 both B B I ASP 3 B C ASP 3 1_555 I CG6 4 B N CG6 4 1_555 covale 1.344 both A A I CG6 4 B C CG6 4 1_555 I ARG 5 B N ARG 5 1_555 covale 1.335 both B B I CG6 4 B C CG6 4 1_555 I ARG 5 B N ARG 5 1_555 covale 1.786 one A A I CG6 4 B SG CG6 4 1_555 I A2G 101 J C1 A2G 1_555 covale 1.786 one B B I CG6 4 B SG CG6 4 1_555 I A2G 101 J C1 A2G 1_555 covale 1.327 both A A I PRO 6 B C PRO 6 1_555 I NH2 7 B N NH2 7 1_555 covale 1.326 both B B I PRO 6 B C PRO 6 1_555 I NH2 7 B N NH2 7 1_555 IMMUNE SYSTEM IMMUNE SYSTEM, ANTIBODIES, ANTIGEN Tn H GLY 102 A GLY 102 1 H GLN 103 A GLN 103 -8.45 H PRO 1049 A PRO 176 1 H ASP 1050 A ASP 177 -1.83 HVM32_MOUSE UNP 1 1 P01801 EVKLEESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSS VYLQMNNLRAEDTGIYYCTTGFAYWGQGTLVTVS LV1E_MOUSE UNP 1 19 P01727 SQAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITG TQTEDEAMYFCALWYSNHWVFGGGTKLTVLG 5N7B PDB 2 1 5N7B 1 114 5N7B 1 118 P01801 H 1 1 116 19 129 5N7B 1007 1117 P01727 H 2 134 244 1 7 5N7B 1 7 5N7B I 3 1 7 1 GLU conflict GLN 1 5N7B H P01801 UNP 1 1 1 LYS conflict GLN 3 5N7B H P01801 UNP 3 3 1 GLU conflict GLN 5 5N7B H P01801 UNP 5 5 1 insertion GLY 100 5N7B H P01801 UNP 100 1 insertion VAL 101 5N7B H P01801 UNP 101 1 THR conflict GLY 102 5N7B H P01801 UNP 100 102 1 GLY conflict GLN 103 5N7B H P01801 UNP 101 103 1 LEU conflict THR 114 5N7B H P01801 UNP 110 112 1 linker SER 990 5N7B H P01801 UNP 117 1 linker SER 991 5N7B H P01801 UNP 118 1 linker SER 992 5N7B H P01801 UNP 119 1 linker GLY 993 5N7B H P01801 UNP 120 1 linker GLY 994 5N7B H P01801 UNP 121 1 linker GLY 995 5N7B H P01801 UNP 122 1 linker GLY 996 5N7B H P01801 UNP 123 1 linker SER 997 5N7B H P01801 UNP 124 1 linker GLY 998 5N7B H P01801 UNP 125 1 linker GLY 999 5N7B H P01801 UNP 126 1 linker GLY 1000 5N7B H P01801 UNP 127 1 linker GLY 1001 5N7B H P01801 UNP 128 1 linker GLY 1002 5N7B H P01801 UNP 129 1 linker SER 1003 5N7B H P01801 UNP 130 1 linker SER 1004 5N7B H P01801 UNP 131 1 linker GLY 1005 5N7B H P01801 UNP 132 1 linker SER 1006 5N7B H P01801 UNP 133 2 GLN conflict ASP 1008 5N7B H P01727 UNP 20 135 2 ALA conflict ILE 1009 5N7B H P01727 UNP 21 136 2 THR conflict ALA 1087 5N7B H P01727 UNP 99 214 2 MET conflict ILE 1094 5N7B H P01727 UNP 106 221 4 6 4 4 6 4 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel H GLN 3 A GLN 3 H SER 7 A SER 7 H MET 18 A MET 18 H SER 25 A SER 25 H SER 80 A SER 80 H MET 85 A MET 85 H PHE 70 A PHE 70 H ASP 75 A ASP 75 H GLY 10 A GLY 10 H VAL 12 A VAL 12 H THR 113 A THR 111 H VAL 117 A VAL 115 H GLY 94 A GLY 94 H GLY 100 A GLY 100 H MET 34 A MET 34 H SER 40 A SER 40 H GLY 44 A GLY 44 H ILE 51 A ILE 51 H THR 60 A THR 60 H TYR 62 A TYR 62 H GLY 10 A GLY 10 H VAL 12 A VAL 12 H THR 113 A THR 111 H VAL 117 A VAL 115 H GLY 94 A GLY 94 H GLY 100 A GLY 100 H TYR 108 A TYR 106 H TRP 109 A TRP 107 H VAL 1011 A VAL 138 H GLN 1013 A GLN 140 H THR 1024 A THR 151 H SER 1031 A SER 158 H LYS 1079 A LYS 206 H THR 1085 A THR 212 H PHE 1071 A PHE 198 H ILE 1076 A ILE 203 H ALA 1016 A ALA 143 H THR 1019 A THR 146 H THR 1111 A THR 238 H VAL 1115 A VAL 242 H ALA 1093 A ALA 220 H TYR 1101 A TYR 228 H ASN 1043 A ASN 170 H LYS 1048 A LYS 175 H LEU 1052 A LEU 179 H GLY 1058 A GLY 185 H ASN 1062 A ASN 189 H ARG 1063 A ARG 190 H ALA 1016 A ALA 143 H THR 1019 A THR 146 H THR 1111 A THR 238 H VAL 1115 A VAL 242 H ALA 1093 A ALA 220 H TYR 1101 A TYR 228 H HIS 1104 A HIS 231 H PHE 1107 A PHE 234 19 P 21 21 21