0.008771
0.005064
0.000000
0.000000
0.010128
0.000000
0.000000
0.000000
0.015211
0.000000
0.000000
0.000000
Thore, S.
Fribourg, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
114.010
114.010
65.740
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
FEBS Open Bio
2211-5463
8
1605
1614
10.1002/2211-5463.12495
30338212
Structural and interaction analysis of the Rrp5 C-terminal region.
2018
0000-0001-7058-3887
0000-0003-4112-7510
100
1
PIXEL
2016-03-19
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.9801
1.0
PROXIMA 1
SOLEIL
0.9801
SYNCHROTRON
SOLEIL BEAMLINE PROXIMA 1
36701.414
rRNA biogenesis protein RRP5
1
man
polymer
18.015
water
151
nat
water
Ribosomal RNA-processing protein 5,U3 small nucleolar RNA-associated protein RRP5,U3 snoRNA-associated protein RRP5
no
no
DWTASILDQAQEEEESDQDQEDFTENKKHKHKRRKENVVQDKTIDINTRAPESVADFERLLIGNPNSSVVWMNYMAFQLQ
LSEIEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAA
ELFKATAKKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVAD
APKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWLQFEESEGDEKTIEYVKAKATEYVAS
DWTASILDQAQEEEESDQDQEDFTENKKHKHKRRKENVVQDKTIDINTRAPESVADFERLLIGNPNSSVVWMNYMAFQLQ
LSEIEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAA
ELFKATAKKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVAD
APKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWLQFEESEGDEKTIEYVKAKATEYVAS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
sample
1
314
RRP5, FMI1, YMR229C, YM9959.11C
4932
Saccharomyces cerevisiae
562
Escherichia coli
Biological sequence
1
3.36
63.40
VAPOR DIFFUSION, SITTING DROP
16-21% PEG1000
100mM Sodium/potassium phosphate, pH 6.0
292
citation
citation_author
repository
Initial release
Data collection
Database references
1
0
2018-08-29
1
1
2018-10-31
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_PubMed
_citation_author.identifier_ORCID
N
PDBE
Y
PDBE
2017-04-04
REL
REL
1
A
O
HOH
1951
6.65
HOH
water
HOH
36
2
HOH
HOH
1801
A
HOH
9
2
HOH
HOH
1802
A
HOH
55
2
HOH
HOH
1803
A
HOH
130
2
HOH
HOH
1804
A
HOH
13
2
HOH
HOH
1805
A
HOH
104
2
HOH
HOH
1806
A
HOH
142
2
HOH
HOH
1807
A
HOH
111
2
HOH
HOH
1808
A
HOH
150
2
HOH
HOH
1809
A
HOH
99
2
HOH
HOH
1810
A
HOH
138
2
HOH
HOH
1811
A
HOH
16
2
HOH
HOH
1812
A
HOH
147
2
HOH
HOH
1813
A
HOH
31
2
HOH
HOH
1814
A
HOH
64
2
HOH
HOH
1815
A
HOH
14
2
HOH
HOH
1816
A
HOH
117
2
HOH
HOH
1817
A
HOH
21
2
HOH
HOH
1818
A
HOH
23
2
HOH
HOH
1819
A
HOH
17
2
HOH
HOH
1820
A
HOH
57
2
HOH
HOH
1821
A
HOH
73
2
HOH
HOH
1822
A
HOH
6
2
HOH
HOH
1823
A
HOH
8
2
HOH
HOH
1824
A
HOH
132
2
HOH
HOH
1825
A
HOH
12
2
HOH
HOH
1826
A
HOH
65
2
HOH
HOH
1827
A
HOH
59
2
HOH
HOH
1828
A
HOH
127
2
HOH
HOH
1829
A
HOH
26
2
HOH
HOH
1830
A
HOH
1
2
HOH
HOH
1831
A
HOH
34
2
HOH
HOH
1832
A
HOH
72
2
HOH
HOH
1833
A
HOH
27
2
HOH
HOH
1834
A
HOH
82
2
HOH
HOH
1835
A
HOH
45
2
HOH
HOH
1836
A
HOH
74
2
HOH
HOH
1837
A
HOH
19
2
HOH
HOH
1838
A
HOH
114
2
HOH
HOH
1839
A
HOH
89
2
HOH
HOH
1840
A
HOH
50
2
HOH
HOH
1841
A
HOH
91
2
HOH
HOH
1842
A
HOH
25
2
HOH
HOH
1843
A
HOH
3
2
HOH
HOH
1844
A
HOH
20
2
HOH
HOH
1845
A
HOH
10
2
HOH
HOH
1846
A
HOH
115
2
HOH
HOH
1847
A
HOH
69
2
HOH
HOH
1848
A
HOH
135
2
HOH
HOH
1849
A
HOH
120
2
HOH
HOH
1850
A
HOH
131
2
HOH
HOH
1851
A
HOH
58
2
HOH
HOH
1852
A
HOH
40
2
HOH
HOH
1853
A
HOH
63
2
HOH
HOH
1854
A
HOH
4
2
HOH
HOH
1855
A
HOH
30
2
HOH
HOH
1856
A
HOH
24
2
HOH
HOH
1857
A
HOH
39
2
HOH
HOH
1858
A
HOH
56
2
HOH
HOH
1859
A
HOH
29
2
HOH
HOH
1860
A
HOH
60
2
HOH
HOH
1861
A
HOH
79
2
HOH
HOH
1862
A
HOH
11
2
HOH
HOH
1863
A
HOH
37
2
HOH
HOH
1864
A
HOH
7
2
HOH
HOH
1865
A
HOH
92
2
HOH
HOH
1866
A
HOH
108
2
HOH
HOH
1867
A
HOH
2
2
HOH
HOH
1868
A
HOH
66
2
HOH
HOH
1869
A
HOH
86
2
HOH
HOH
1870
A
HOH
84
2
HOH
HOH
1871
A
HOH
124
2
HOH
HOH
1872
A
HOH
54
2
HOH
HOH
1873
A
HOH
85
2
HOH
HOH
1874
A
HOH
90
2
HOH
HOH
1875
A
HOH
109
2
HOH
HOH
1876
A
HOH
106
2
HOH
HOH
1877
A
HOH
62
2
HOH
HOH
1878
A
HOH
70
2
HOH
HOH
1879
A
HOH
51
2
HOH
HOH
1880
A
HOH
148
2
HOH
HOH
1881
A
HOH
32
2
HOH
HOH
1882
A
HOH
53
2
HOH
HOH
1883
A
HOH
28
2
HOH
HOH
1884
A
HOH
61
2
HOH
HOH
1885
A
HOH
22
2
HOH
HOH
1886
A
HOH
41
2
HOH
HOH
1887
A
HOH
141
2
HOH
HOH
1888
A
HOH
18
2
HOH
HOH
1889
A
HOH
42
2
HOH
HOH
1890
A
HOH
76
2
HOH
HOH
1891
A
HOH
112
2
HOH
HOH
1892
A
HOH
103
2
HOH
HOH
1893
A
HOH
68
2
HOH
HOH
1894
A
HOH
95
2
HOH
HOH
1895
A
HOH
78
2
HOH
HOH
1896
A
HOH
100
2
HOH
HOH
1897
A
HOH
98
2
HOH
HOH
1898
A
HOH
105
2
HOH
HOH
1899
A
HOH
5
2
HOH
HOH
1900
A
HOH
96
2
HOH
HOH
1901
A
HOH
140
2
HOH
HOH
1902
A
HOH
146
2
HOH
HOH
1903
A
HOH
83
2
HOH
HOH
1904
A
HOH
110
2
HOH
HOH
1905
A
HOH
107
2
HOH
HOH
1906
A
HOH
81
2
HOH
HOH
1907
A
HOH
35
2
HOH
HOH
1908
A
HOH
113
2
HOH
HOH
1909
A
HOH
77
2
HOH
HOH
1910
A
HOH
128
2
HOH
HOH
1911
A
HOH
145
2
HOH
HOH
1912
A
HOH
129
2
HOH
HOH
1913
A
HOH
38
2
HOH
HOH
1914
A
HOH
67
2
HOH
HOH
1915
A
HOH
122
2
HOH
HOH
1916
A
HOH
125
2
HOH
HOH
1917
A
HOH
144
2
HOH
HOH
1918
A
HOH
93
2
HOH
HOH
1919
A
HOH
33
2
HOH
HOH
1920
A
HOH
134
2
HOH
HOH
1921
A
HOH
149
2
HOH
HOH
1922
A
HOH
15
2
HOH
HOH
1923
A
HOH
126
2
HOH
HOH
1924
A
HOH
123
2
HOH
HOH
1925
A
HOH
94
2
HOH
HOH
1926
A
HOH
44
2
HOH
HOH
1927
A
HOH
119
2
HOH
HOH
1928
A
HOH
139
2
HOH
HOH
1929
A
HOH
43
2
HOH
HOH
1930
A
HOH
121
2
HOH
HOH
1931
A
HOH
46
2
HOH
HOH
1932
A
HOH
136
2
HOH
HOH
1933
A
HOH
116
2
HOH
HOH
1934
A
HOH
151
2
HOH
HOH
1935
A
HOH
118
2
HOH
HOH
1936
A
HOH
80
2
HOH
HOH
1937
A
HOH
71
2
HOH
HOH
1938
A
HOH
75
2
HOH
HOH
1939
A
HOH
47
2
HOH
HOH
1940
A
HOH
49
2
HOH
HOH
1941
A
HOH
52
2
HOH
HOH
1942
A
HOH
101
2
HOH
HOH
1943
A
HOH
133
2
HOH
HOH
1944
A
HOH
143
2
HOH
HOH
1945
A
HOH
48
2
HOH
HOH
1946
A
HOH
102
2
HOH
HOH
1947
A
HOH
97
2
HOH
HOH
1948
A
HOH
137
2
HOH
HOH
1949
A
HOH
87
2
HOH
HOH
1950
A
HOH
88
2
HOH
HOH
1951
A
ASP
1408
n
1
ASP
1408
A
TRP
1409
n
2
TRP
1409
A
THR
1410
n
3
THR
1410
A
ALA
1411
n
4
ALA
1411
A
SER
1412
n
5
SER
1412
A
ILE
1413
n
6
ILE
1413
A
LEU
1414
n
7
LEU
1414
A
ASP
1415
n
8
ASP
1415
A
GLN
1416
n
9
GLN
1416
A
ALA
1417
n
10
ALA
1417
A
GLN
1418
n
11
GLN
1418
A
n
12
1419
A
n
13
1420
A
n
14
1421
A
n
15
1422
A
n
16
1423
A
n
17
1424
A
n
18
1425
A
n
19
1426
A
n
20
1427
A
n
21
1428
A
n
22
1429
A
n
23
1430
A
n
24
1431
A
n
25
1432
A
n
26
1433
A
n
27
1434
A
n
28
1435
A
n
29
1436
A
n
30
1437
A
n
31
1438
A
n
32
1439
A
n
33
1440
A
n
34
1441
A
n
35
1442
A
n
36
1443
A
n
37
1444
A
n
38
1445
A
n
39
1446
A
n
40
1447
A
n
41
1448
A
n
42
1449
A
n
43
1450
A
n
44
1451
A
n
45
1452
A
n
46
1453
A
n
47
1454
A
n
48
1455
A
ARG
1456
n
49
ARG
1456
A
ALA
1457
n
50
ALA
1457
A
PRO
1458
n
51
PRO
1458
A
GLU
1459
n
52
GLU
1459
A
SER
1460
n
53
SER
1460
A
VAL
1461
n
54
VAL
1461
A
ALA
1462
n
55
ALA
1462
A
ASP
1463
n
56
ASP
1463
A
PHE
1464
n
57
PHE
1464
A
GLU
1465
n
58
GLU
1465
A
ARG
1466
n
59
ARG
1466
A
LEU
1467
n
60
LEU
1467
A
LEU
1468
n
61
LEU
1468
A
ILE
1469
n
62
ILE
1469
A
GLY
1470
n
63
GLY
1470
A
ASN
1471
n
64
ASN
1471
A
PRO
1472
n
65
PRO
1472
A
ASN
1473
n
66
ASN
1473
A
SER
1474
n
67
SER
1474
A
SER
1475
n
68
SER
1475
A
VAL
1476
n
69
VAL
1476
A
VAL
1477
n
70
VAL
1477
A
TRP
1478
n
71
TRP
1478
A
MET
1479
n
72
MET
1479
A
ASN
1480
n
73
ASN
1480
A
TYR
1481
n
74
TYR
1481
A
MET
1482
n
75
MET
1482
A
ALA
1483
n
76
ALA
1483
A
PHE
1484
n
77
PHE
1484
A
GLN
1485
n
78
GLN
1485
A
LEU
1486
n
79
LEU
1486
A
GLN
1487
n
80
GLN
1487
A
LEU
1488
n
81
LEU
1488
A
SER
1489
n
82
SER
1489
A
GLU
1490
n
83
GLU
1490
A
ILE
1491
n
84
ILE
1491
A
GLU
1492
n
85
GLU
1492
A
LYS
1493
n
86
LYS
1493
A
ALA
1494
n
87
ALA
1494
A
ARG
1495
n
88
ARG
1495
A
GLU
1496
n
89
GLU
1496
A
LEU
1497
n
90
LEU
1497
A
ALA
1498
n
91
ALA
1498
A
GLU
1499
n
92
GLU
1499
A
ARG
1500
n
93
ARG
1500
A
ALA
1501
n
94
ALA
1501
A
LEU
1502
n
95
LEU
1502
A
LYS
1503
n
96
LYS
1503
A
THR
1504
n
97
THR
1504
A
ILE
1505
n
98
ILE
1505
A
ASN
1506
n
99
ASN
1506
A
PHE
1507
n
100
PHE
1507
A
ARG
1508
n
101
ARG
1508
A
GLU
1509
n
102
GLU
1509
A
GLU
1510
n
103
GLU
1510
A
ALA
1511
n
104
ALA
1511
A
GLU
1512
n
105
GLU
1512
A
LYS
1513
n
106
LYS
1513
A
LEU
1514
n
107
LEU
1514
A
ASN
1515
n
108
ASN
1515
A
ILE
1516
n
109
ILE
1516
A
TRP
1517
n
110
TRP
1517
A
ILE
1518
n
111
ILE
1518
A
ALA
1519
n
112
ALA
1519
A
MET
1520
n
113
MET
1520
A
LEU
1521
n
114
LEU
1521
A
ASN
1522
n
115
ASN
1522
A
LEU
1523
n
116
LEU
1523
A
GLU
1524
n
117
GLU
1524
A
ASN
1525
n
118
ASN
1525
A
THR
1526
n
119
THR
1526
A
PHE
1527
n
120
PHE
1527
A
GLY
1528
n
121
GLY
1528
A
THR
1529
n
122
THR
1529
A
GLU
1530
n
123
GLU
1530
A
GLU
1531
n
124
GLU
1531
A
THR
1532
n
125
THR
1532
A
LEU
1533
n
126
LEU
1533
A
GLU
1534
n
127
GLU
1534
A
GLU
1535
n
128
GLU
1535
A
VAL
1536
n
129
VAL
1536
A
PHE
1537
n
130
PHE
1537
A
SER
1538
n
131
SER
1538
A
ARG
1539
n
132
ARG
1539
A
ALA
1540
n
133
ALA
1540
A
CYS
1541
n
134
CYS
1541
A
GLN
1542
n
135
GLN
1542
A
TYR
1543
n
136
TYR
1543
A
MET
1544
n
137
MET
1544
A
ASP
1545
n
138
ASP
1545
A
SER
1546
n
139
SER
1546
A
TYR
1547
n
140
TYR
1547
A
THR
1548
n
141
THR
1548
A
ILE
1549
n
142
ILE
1549
A
HIS
1550
n
143
HIS
1550
A
THR
1551
n
144
THR
1551
A
LYS
1552
n
145
LYS
1552
A
LEU
1553
n
146
LEU
1553
A
LEU
1554
n
147
LEU
1554
A
GLY
1555
n
148
GLY
1555
A
ILE
1556
n
149
ILE
1556
A
TYR
1557
n
150
TYR
1557
A
GLU
1558
n
151
GLU
1558
A
ILE
1559
n
152
ILE
1559
A
SER
1560
n
153
SER
1560
A
GLU
1561
n
154
GLU
1561
A
LYS
1562
n
155
LYS
1562
A
PHE
1563
n
156
PHE
1563
A
ASP
1564
n
157
ASP
1564
A
LYS
1565
n
158
LYS
1565
A
ALA
1566
n
159
ALA
1566
A
ALA
1567
n
160
ALA
1567
A
GLU
1568
n
161
GLU
1568
A
LEU
1569
n
162
LEU
1569
A
PHE
1570
n
163
PHE
1570
A
LYS
1571
n
164
LYS
1571
A
ALA
1572
n
165
ALA
1572
A
THR
1573
n
166
THR
1573
A
ALA
1574
n
167
ALA
1574
A
LYS
1575
n
168
LYS
1575
A
LYS
1576
n
169
LYS
1576
A
PHE
1577
n
170
PHE
1577
A
GLY
1578
n
171
GLY
1578
A
GLY
1579
n
172
GLY
1579
A
GLU
1580
n
173
GLU
1580
A
LYS
1581
n
174
LYS
1581
A
VAL
1582
n
175
VAL
1582
A
SER
1583
n
176
SER
1583
A
ILE
1584
n
177
ILE
1584
A
TRP
1585
n
178
TRP
1585
A
VAL
1586
n
179
VAL
1586
A
SER
1587
n
180
SER
1587
A
TRP
1588
n
181
TRP
1588
A
GLY
1589
n
182
GLY
1589
A
ASP
1590
n
183
ASP
1590
A
PHE
1591
n
184
PHE
1591
A
LEU
1592
n
185
LEU
1592
A
ILE
1593
n
186
ILE
1593
A
SER
1594
n
187
SER
1594
A
HIS
1595
n
188
HIS
1595
A
ASN
1596
n
189
ASN
1596
A
GLU
1597
n
190
GLU
1597
A
GLU
1598
n
191
GLU
1598
A
GLN
1599
n
192
GLN
1599
A
GLU
1600
n
193
GLU
1600
A
ALA
1601
n
194
ALA
1601
A
ARG
1602
n
195
ARG
1602
A
THR
1603
n
196
THR
1603
A
ILE
1604
n
197
ILE
1604
A
LEU
1605
n
198
LEU
1605
A
GLY
1606
n
199
GLY
1606
A
ASN
1607
n
200
ASN
1607
A
ALA
1608
n
201
ALA
1608
A
LEU
1609
n
202
LEU
1609
A
LYS
1610
n
203
LYS
1610
A
ALA
1611
n
204
ALA
1611
A
LEU
1612
n
205
LEU
1612
A
PRO
1613
n
206
PRO
1613
A
LYS
1614
n
207
LYS
1614
A
ARG
1615
n
208
ARG
1615
A
ASN
1616
n
209
ASN
1616
A
HIS
1617
n
210
HIS
1617
A
ILE
1618
n
211
ILE
1618
A
GLU
1619
n
212
GLU
1619
A
VAL
1620
n
213
VAL
1620
A
VAL
1621
n
214
VAL
1621
A
ARG
1622
n
215
ARG
1622
A
LYS
1623
n
216
LYS
1623
A
PHE
1624
n
217
PHE
1624
A
ALA
1625
n
218
ALA
1625
A
GLN
1626
n
219
GLN
1626
A
LEU
1627
n
220
LEU
1627
A
GLU
1628
n
221
GLU
1628
A
PHE
1629
n
222
PHE
1629
A
ALA
1630
n
223
ALA
1630
A
LYS
1631
n
224
LYS
1631
A
GLY
1632
n
225
GLY
1632
A
ASP
1633
n
226
ASP
1633
A
PRO
1634
n
227
PRO
1634
A
GLU
1635
n
228
GLU
1635
A
ARG
1636
n
229
ARG
1636
A
GLY
1637
n
230
GLY
1637
A
ARG
1638
n
231
ARG
1638
A
SER
1639
n
232
SER
1639
A
LEU
1640
n
233
LEU
1640
A
PHE
1641
n
234
PHE
1641
A
GLU
1642
n
235
GLU
1642
A
GLY
1643
n
236
GLY
1643
A
LEU
1644
n
237
LEU
1644
A
VAL
1645
n
238
VAL
1645
A
ALA
1646
n
239
ALA
1646
A
ASP
1647
n
240
ASP
1647
A
ALA
1648
n
241
ALA
1648
A
PRO
1649
n
242
PRO
1649
A
LYS
1650
n
243
LYS
1650
A
ARG
1651
n
244
ARG
1651
A
ILE
1652
n
245
ILE
1652
A
ASP
1653
n
246
ASP
1653
A
LEU
1654
n
247
LEU
1654
A
TRP
1655
n
248
TRP
1655
A
ASN
1656
n
249
ASN
1656
A
VAL
1657
n
250
VAL
1657
A
TYR
1658
n
251
TYR
1658
A
VAL
1659
n
252
VAL
1659
A
ASP
1660
n
253
ASP
1660
A
GLN
1661
n
254
GLN
1661
A
GLU
1662
n
255
GLU
1662
A
VAL
1663
n
256
VAL
1663
A
LYS
1664
n
257
LYS
1664
A
ALA
1665
n
258
ALA
1665
A
LYS
1666
n
259
LYS
1666
A
ASP
1667
n
260
ASP
1667
A
LYS
1668
n
261
LYS
1668
A
LYS
1669
n
262
LYS
1669
A
LYS
1670
n
263
LYS
1670
A
VAL
1671
n
264
VAL
1671
A
GLU
1672
n
265
GLU
1672
A
ASP
1673
n
266
ASP
1673
A
LEU
1674
n
267
LEU
1674
A
PHE
1675
n
268
PHE
1675
A
GLU
1676
n
269
GLU
1676
A
ARG
1677
n
270
ARG
1677
A
ILE
1678
n
271
ILE
1678
A
ILE
1679
n
272
ILE
1679
A
THR
1680
n
273
THR
1680
A
LYS
1681
n
274
LYS
1681
A
LYS
1682
n
275
LYS
1682
A
ILE
1683
n
276
ILE
1683
A
THR
1684
n
277
THR
1684
A
ARG
1685
n
278
ARG
1685
A
LYS
1686
n
279
LYS
1686
A
GLN
1687
n
280
GLN
1687
A
ALA
1688
n
281
ALA
1688
A
LYS
1689
n
282
LYS
1689
A
PHE
1690
n
283
PHE
1690
A
PHE
1691
n
284
PHE
1691
A
PHE
1692
n
285
PHE
1692
A
ASN
1693
n
286
ASN
1693
A
LYS
1694
n
287
LYS
1694
A
TRP
1695
n
288
TRP
1695
A
LEU
1696
n
289
LEU
1696
A
GLN
1697
n
290
GLN
1697
A
PHE
1698
n
291
PHE
1698
A
GLU
1699
n
292
GLU
1699
A
GLU
1700
n
293
GLU
1700
A
SER
1701
n
294
SER
1701
A
GLU
1702
n
295
GLU
1702
A
GLY
1703
n
296
GLY
1703
A
ASP
1704
n
297
ASP
1704
A
GLU
1705
n
298
GLU
1705
A
LYS
1706
n
299
LYS
1706
A
THR
1707
n
300
THR
1707
A
ILE
1708
n
301
ILE
1708
A
GLU
1709
n
302
GLU
1709
A
TYR
1710
n
303
TYR
1710
A
VAL
1711
n
304
VAL
1711
A
LYS
1712
n
305
LYS
1712
A
ALA
1713
n
306
ALA
1713
A
LYS
1714
n
307
LYS
1714
A
ALA
1715
n
308
ALA
1715
A
THR
1716
n
309
THR
1716
A
GLU
1717
n
310
GLU
1717
A
TYR
1718
n
311
TYR
1718
A
VAL
1719
n
312
VAL
1719
A
ALA
1720
n
313
ALA
1720
A
SER
1721
n
314
SER
1721
A
author_and_software_defined_assembly
PISA
1
monomeric
gel filtration
0
0
15310
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HOH
1851
B
HOH
1
A
GLU
1419
A
GLU
12
1
Y
1
A
GLU
1420
A
GLU
13
1
Y
1
A
GLU
1421
A
GLU
14
1
Y
1
A
GLU
1422
A
GLU
15
1
Y
1
A
SER
1423
A
SER
16
1
Y
1
A
ASP
1424
A
ASP
17
1
Y
1
A
GLN
1425
A
GLN
18
1
Y
1
A
ASP
1426
A
ASP
19
1
Y
1
A
GLN
1427
A
GLN
20
1
Y
1
A
GLU
1428
A
GLU
21
1
Y
1
A
ASP
1429
A
ASP
22
1
Y
1
A
PHE
1430
A
PHE
23
1
Y
1
A
THR
1431
A
THR
24
1
Y
1
A
GLU
1432
A
GLU
25
1
Y
1
A
ASN
1433
A
ASN
26
1
Y
1
A
LYS
1434
A
LYS
27
1
Y
1
A
LYS
1435
A
LYS
28
1
Y
1
A
HIS
1436
A
HIS
29
1
Y
1
A
LYS
1437
A
LYS
30
1
Y
1
A
HIS
1438
A
HIS
31
1
Y
1
A
LYS
1439
A
LYS
32
1
Y
1
A
ARG
1440
A
ARG
33
1
Y
1
A
ARG
1441
A
ARG
34
1
Y
1
A
LYS
1442
A
LYS
35
1
Y
1
A
GLU
1443
A
GLU
36
1
Y
1
A
ASN
1444
A
ASN
37
1
Y
1
A
VAL
1445
A
VAL
38
1
Y
1
A
VAL
1446
A
VAL
39
1
Y
1
A
GLN
1447
A
GLN
40
1
Y
1
A
ASP
1448
A
ASP
41
1
Y
1
A
LYS
1449
A
LYS
42
1
Y
1
A
THR
1450
A
THR
43
1
Y
1
A
ILE
1451
A
ILE
44
1
Y
1
A
ASP
1452
A
ASP
45
1
Y
1
A
ILE
1453
A
ILE
46
1
Y
1
A
ASN
1454
A
ASN
47
1
Y
1
A
THR
1455
A
THR
48
1
Y
1
A
A
CD1
OE1
ILE
GLN
1683
1687
0.63
1
A
A
CD1
CD
ILE
GLN
1683
1687
1.80
1
A
A
CG1
OE1
ILE
GLN
1683
1687
2.12
1
A
A
O
O
GLU
HOH
1558
1801
2.13
1
A
A
O
O
HOH
HOH
1813
1907
2.13
1_555
2_984
1
A
GLU
1597
-119.49
70.57
1
A
THR
1680
-100.14
40.42
1
A
LYS
1682
-63.83
73.23
121.020
52.0095
22.460
0.2408
0.1978
0.2019
2.3500
39.4760
2002
18749
20751
9.6500
99.7700
0.3200
1
FREE R-VALUE
1.380
MOLECULAR REPLACEMENT
25.6300
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
2.3500
39.4760
151
2420
46.07
0
0
2269
277
0.009
2313
0.890
3111
0.052
336
0.005
397
20.629
1400
0.3623
0.0000
0.3199
2.4089
135
1267
1402
14
98.0000
0.3411
0.0000
0.2828
2.4740
140
1350
1490
14
100.0000
0.3161
0.0000
0.2663
2.5468
141
1320
1461
14
100.0000
0.3246
0.0000
0.2482
2.6290
141
1328
1469
14
100.0000
0.2632
0.0000
0.2380
2.7229
144
1328
1472
14
100.0000
0.2831
0.0000
0.2340
2.8319
141
1321
1462
14
100.0000
0.2720
0.0000
0.2318
2.9607
146
1331
1477
14
100.0000
0.2772
0.0000
0.2295
3.1168
138
1345
1483
14
100.0000
0.3063
0.0000
0.2143
3.3119
145
1333
1478
14
100.0000
0.2468
0.0000
0.1942
3.5675
144
1348
1492
14
100.0000
0.2195
0.0000
0.1654
3.9262
148
1347
1495
14
100.0000
0.1888
0.0000
0.1595
4.4937
144
1340
1484
14
99.0000
0.2145
0.0000
0.1632
5.6589
142
1364
1506
14
100.0000
0.1802
0.0000
0.1742
39.4817
153
1427
1580
14
100.0000
40.770
2.350
39.476
5NLG
20756
-3.000
0.998
0.093
0.104
0.966
1
13.170
106545
5.133
5
99.800
0.973
2.350
2.410
1.720
6629
1512
1491
0.664
1.102
1
4.446
98.600
0.729
2.410
2.480
2.480
7314
1478
1476
0.774
0.816
1
4.955
99.900
0.630
2.480
2.550
3.160
7736
1424
1424
0.809
0.699
1
5.433
100.000
0.510
2.550
2.630
3.800
7605
1410
1410
0.880
0.565
1
5.394
100.000
0.433
2.630
2.710
4.470
7264
1359
1358
0.901
0.480
1
5.349
99.900
0.350
2.710
2.810
5.640
7072
1323
1321
0.928
0.389
1
5.354
99.800
0.258
2.810
2.910
7.230
6720
1262
1262
0.963
0.286
1
5.325
100.000
0.205
2.910
3.030
8.910
6499
1221
1221
0.977
0.228
1
5.323
100.000
0.160
3.030
3.170
10.970
6282
1187
1186
0.982
0.177
1
5.297
99.900
0.111
3.170
3.320
14.320
5891
1120
1119
0.991
0.124
1
5.265
99.900
0.089
3.320
3.500
17.050
5634
1086
1085
0.994
0.099
1
5.193
99.900
0.068
3.500
3.720
20.280
5189
1019
1018
0.996
0.076
1
5.097
99.900
0.058
3.720
3.970
23.100
4710
952
952
0.997
0.064
1
4.947
100.000
0.052
3.970
4.290
24.450
4144
897
889
0.996
0.058
1
4.661
99.100
0.045
4.290
4.700
24.370
3651
854
850
0.997
0.051
1
4.295
99.500
0.044
4.700
5.260
28.940
3806
733
732
0.998
0.049
1
5.199
99.900
0.039
5.260
6.070
30.640
3684
670
670
0.999
0.043
1
5.499
100.000
0.040
6.070
7.430
31.660
3130
577
577
0.999
0.045
1
5.425
100.000
0.027
7.430
10.510
42.120
2342
446
446
1.000
0.030
1
5.251
100.000
0.025
10.510
39.476
45.940
1243
275
269
0.999
0.029
1
4.621
97.800
refinement
PHENIX
data scaling
XSCALE
data extraction
PDB_EXTRACT
3.22
data reduction
XDS
phasing
PHASER
N
rRNA biogenesis protein RRP5
RRP5 C-terminal domain
1
N
N
2
N
N
A
ASP
1408
A
ASP
1
HELX_P
A
GLN
1418
A
GLN
11
1
AA1
11
A
SER
1460
A
SER
53
HELX_P
A
ASN
1471
A
ASN
64
1
AA2
12
A
SER
1474
A
SER
67
HELX_P
A
LEU
1488
A
LEU
81
1
AA3
15
A
GLU
1490
A
GLU
83
HELX_P
A
ILE
1505
A
ILE
98
1
AA4
16
A
GLU
1509
A
GLU
102
HELX_P
A
GLY
1528
A
GLY
121
1
AA5
20
A
THR
1529
A
THR
122
HELX_P
A
MET
1544
A
MET
137
1
AA6
16
A
ASP
1545
A
ASP
138
HELX_P
A
SER
1560
A
SER
153
1
AA7
16
A
LYS
1562
A
LYS
155
HELX_P
A
GLY
1578
A
GLY
171
1
AA8
17
A
LYS
1581
A
LYS
174
HELX_P
A
HIS
1595
A
HIS
188
1
AA9
15
A
GLU
1597
A
GLU
190
HELX_P
A
LEU
1612
A
LEU
205
1
AB1
16
A
PRO
1613
A
PRO
206
HELX_P
A
ARG
1615
A
ARG
208
5
AB2
3
A
ASN
1616
A
ASN
209
HELX_P
A
GLY
1632
A
GLY
225
1
AB3
17
A
ASP
1633
A
ASP
226
HELX_P
A
ALA
1648
A
ALA
241
1
AB4
16
A
ARG
1651
A
ARG
244
HELX_P
A
LYS
1666
A
LYS
259
1
AB5
16
A
ASP
1667
A
ASP
260
HELX_P
A
ILE
1679
A
ILE
272
1
AB6
13
A
THR
1684
A
THR
277
HELX_P
A
SER
1701
A
SER
294
1
AB7
18
A
ASP
1704
A
ASP
297
HELX_P
A
SER
1721
A
SER
314
1
AB8
18
NUCLEAR PROTEIN
Ribosome biogenesis 90S TPR domain, nuclear protein
RRP5_YEAST
UNP
1
1408
Q05022
DWTASILDQAQEEEESDQDQEDFTENKKHKHKRRKENVVQDKTIDINTRAPESVADFERLLIGNPNSSVVWMNYMAFQLQ
LSEIEKARELAERALKTINFREEAEKLNIWIAMLNLENTFGTEETLEEVFSRACQYMDSYTIHTKLLGIYEISEKFDKAA
ELFKATAKKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKFAQLEFAKGDPERGRSLFEGLVAD
APKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKITRKQAKFFFNKWLQFEESEGDEKTIEYVKAKATEYVAS
1408
1721
5NLG
1408
1721
Q05022
A
1
1
314
154
P 32 2 1