0.026990
0.000000
0.000000
-0.000000
0.022655
0.000000
0.000000
-0.000000
0.012233
0.00000
0.00000
0.00000
Filippakopoulos, P.
Picaud, S.
Newman, J.
Sorrell, F.
von Delft, F.
Arrowsmith, C.H.
Edwards, A.M.
Bountra, C.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
37.051
44.141
81.746
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C8 H16 N2 O3
188.224
n
N(6)-ACETYLLYSINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
O
N
15
N
C
N
16
N
C
N
17
N
N
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
C
N
22
S
C
N
23
N
N
N
24
N
C
N
25
N
O
N
26
N
O
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
C
N
49
N
C
N
50
N
N
N
51
N
C
N
52
N
N
N
53
N
N
N
54
N
O
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
N
N
71
S
C
N
72
N
C
N
73
N
O
N
74
N
C
N
75
N
C
N
76
N
O
N
77
N
N
N
78
N
O
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
N
N
88
S
C
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
C
N
93
N
O
N
94
N
O
N
95
N
O
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
N
N
104
R
C
N
105
N
C
N
106
N
O
N
107
N
C
N
108
N
S
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
S
C
N
129
N
C
N
130
N
O
N
131
N
C
N
132
N
C
N
133
N
C
N
134
N
O
N
135
N
N
N
136
N
O
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
O
N
155
N
O
N
156
N
O
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
N
N
177
S
C
N
178
N
C
N
179
N
O
N
180
N
C
Y
181
N
C
Y
182
N
N
Y
183
N
C
Y
184
N
C
Y
185
N
N
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
N
N
201
S
C
N
202
N
C
N
203
N
O
N
204
S
C
N
205
N
C
N
206
N
C
N
207
N
C
N
208
N
O
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
N
N
223
S
C
N
224
N
C
N
225
N
O
N
226
N
C
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
N
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
S
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
N
N
330
S
C
N
331
N
C
N
332
N
O
N
333
N
C
N
334
N
O
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
R
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
N
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
N
N
388
S
C
N
389
N
C
N
390
N
O
N
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
N
398
N
O
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
N
N
412
S
C
N
413
N
C
N
414
N
O
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
doub
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
Y
177
N
sing
Y
178
N
doub
Y
179
N
doub
N
180
N
sing
Y
181
N
sing
N
182
N
sing
Y
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
doub
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
Y
285
N
doub
Y
286
N
sing
Y
287
N
sing
N
288
N
sing
Y
289
N
doub
N
290
N
sing
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
US
Mol. Cell
MOCEFL
2168
1097-4164
73
621
638.e17
10.1016/j.molcel.2018.11.006
30554943
Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.
2019
10.2210/pdb5nng/pdb
pdb_00005nng
100
1
PIXEL
2016-04-16
DECTRIS PILATUS 6M-F
SINGLE WAVELENGTH
M
x-ray
1
0.97949
1.0
I02
Diamond
0.97949
SYNCHROTRON
DIAMOND BEAMLINE I02
15099.380
Bromodomain-containing protein 4
1
man
polymer
SRPK1 peptide acetylated at K585 and K588
C-terminal TYR added for UV detection
1422.580
VAG(ALY)YS(ALY)EFFY
1
syn
polymer
62.068
1,2-ETHANEDIOL
2
syn
non-polymer
18.015
water
199
nat
water
Protein HUNK1
no
no
SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN
AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN
AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
A
polypeptide(L)
no
yes
VAG(ALY)YS(ALY)EFFY
VAGKYSKEFFY
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
127
BRD4, HUNK1
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
R3
Plasmid
Biological sequence
pNIC28-Bsa4
1
2.02
39.20
VAPOR DIFFUSION, SITTING DROP
7.0
30% PEG1000
0.1M PCB pH 7.0
277
Structural Genomics Consortium
SGC
citation
citation_author
citation
citation_author
citation
database_PDB_rev
database_PDB_rev_record
pdbx_database_proc
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Database references
Data collection
Database references
Data collection
Database references
Refinement description
1
0
2018-05-16
1
1
2018-11-28
1
2
2018-12-26
1
3
2019-02-20
1
4
2024-01-17
_citation.title
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United Kingdom
Wellcome Trust
095751/Z/11/Z
Y
PDBE
Y
PDBE
2017-04-08
REL
REL
1
A
O
HOH
488
6.16
EDO
1,2-ETHANEDIOL
HOH
water
9606
Human
Homo sapiens
sample
1
11
2OSS
PDB
experimental model
EDO
1
3
EDO
EDO
201
A
EDO
2
3
EDO
EDO
202
A
HOH
187
4
HOH
HOH
301
A
HOH
217
4
HOH
HOH
302
A
HOH
218
4
HOH
HOH
303
A
HOH
219
4
HOH
HOH
304
A
HOH
174
4
HOH
HOH
305
A
HOH
237
4
HOH
HOH
306
A
HOH
70
4
HOH
HOH
307
A
HOH
206
4
HOH
HOH
308
A
HOH
126
4
HOH
HOH
309
A
HOH
235
4
HOH
HOH
310
A
HOH
241
4
HOH
HOH
311
A
HOH
1
4
HOH
HOH
312
A
HOH
34
4
HOH
HOH
313
A
HOH
150
4
HOH
HOH
314
A
HOH
44
4
HOH
HOH
315
A
HOH
196
4
HOH
HOH
316
A
HOH
245
4
HOH
HOH
317
A
HOH
68
4
HOH
HOH
318
A
HOH
179
4
HOH
HOH
319
A
HOH
8
4
HOH
HOH
320
A
HOH
254
4
HOH
HOH
321
A
HOH
36
4
HOH
HOH
322
A
HOH
181
4
HOH
HOH
323
A
HOH
157
4
HOH
HOH
324
A
HOH
191
4
HOH
HOH
325
A
HOH
89
4
HOH
HOH
326
A
HOH
26
4
HOH
HOH
327
A
HOH
221
4
HOH
HOH
328
A
HOH
49
4
HOH
HOH
329
A
HOH
123
4
HOH
HOH
330
A
HOH
29
4
HOH
HOH
331
A
HOH
155
4
HOH
HOH
332
A
HOH
54
4
HOH
HOH
333
A
HOH
30
4
HOH
HOH
334
A
HOH
61
4
HOH
HOH
335
A
HOH
180
4
HOH
HOH
336
A
HOH
129
4
HOH
HOH
337
A
HOH
23
4
HOH
HOH
338
A
HOH
146
4
HOH
HOH
339
A
HOH
88
4
HOH
HOH
340
A
HOH
72
4
HOH
HOH
341
A
HOH
15
4
HOH
HOH
342
A
HOH
20
4
HOH
HOH
343
A
HOH
57
4
HOH
HOH
344
A
HOH
92
4
HOH
HOH
345
A
HOH
98
4
HOH
HOH
346
A
HOH
18
4
HOH
HOH
347
A
HOH
2
4
HOH
HOH
348
A
HOH
16
4
HOH
HOH
349
A
HOH
67
4
HOH
HOH
350
A
HOH
59
4
HOH
HOH
351
A
HOH
7
4
HOH
HOH
352
A
HOH
121
4
HOH
HOH
353
A
HOH
258
4
HOH
HOH
354
A
HOH
3
4
HOH
HOH
355
A
HOH
171
4
HOH
HOH
356
A
HOH
161
4
HOH
HOH
357
A
HOH
50
4
HOH
HOH
358
A
HOH
6
4
HOH
HOH
359
A
HOH
41
4
HOH
HOH
360
A
HOH
248
4
HOH
HOH
361
A
HOH
73
4
HOH
HOH
362
A
HOH
45
4
HOH
HOH
363
A
HOH
132
4
HOH
HOH
364
A
HOH
53
4
HOH
HOH
365
A
HOH
133
4
HOH
HOH
366
A
HOH
42
4
HOH
HOH
367
A
HOH
80
4
HOH
HOH
368
A
HOH
232
4
HOH
HOH
369
A
HOH
35
4
HOH
HOH
370
A
HOH
93
4
HOH
HOH
371
A
HOH
37
4
HOH
HOH
372
A
HOH
27
4
HOH
HOH
373
A
HOH
130
4
HOH
HOH
374
A
HOH
227
4
HOH
HOH
375
A
HOH
48
4
HOH
HOH
376
A
HOH
166
4
HOH
HOH
377
A
HOH
100
4
HOH
HOH
378
A
HOH
12
4
HOH
HOH
379
A
HOH
33
4
HOH
HOH
380
A
HOH
31
4
HOH
HOH
381
A
HOH
17
4
HOH
HOH
382
A
HOH
28
4
HOH
HOH
383
A
HOH
253
4
HOH
HOH
384
A
HOH
9
4
HOH
HOH
385
A
HOH
52
4
HOH
HOH
386
A
HOH
64
4
HOH
HOH
387
A
HOH
91
4
HOH
HOH
388
A
HOH
43
4
HOH
HOH
389
A
HOH
144
4
HOH
HOH
390
A
HOH
40
4
HOH
HOH
391
A
HOH
69
4
HOH
HOH
392
A
HOH
124
4
HOH
HOH
393
A
HOH
169
4
HOH
HOH
394
A
HOH
87
4
HOH
HOH
395
A
HOH
242
4
HOH
HOH
396
A
HOH
60
4
HOH
HOH
397
A
HOH
51
4
HOH
HOH
398
A
HOH
226
4
HOH
HOH
399
A
HOH
222
4
HOH
HOH
400
A
HOH
76
4
HOH
HOH
401
A
HOH
176
4
HOH
HOH
402
A
HOH
55
4
HOH
HOH
403
A
HOH
95
4
HOH
HOH
404
A
HOH
255
4
HOH
HOH
405
A
HOH
118
4
HOH
HOH
406
A
HOH
58
4
HOH
HOH
407
A
HOH
247
4
HOH
HOH
408
A
HOH
94
4
HOH
HOH
409
A
HOH
163
4
HOH
HOH
410
A
HOH
135
4
HOH
HOH
411
A
HOH
160
4
HOH
HOH
412
A
HOH
4
4
HOH
HOH
413
A
HOH
46
4
HOH
HOH
414
A
HOH
74
4
HOH
HOH
415
A
HOH
82
4
HOH
HOH
416
A
HOH
19
4
HOH
HOH
417
A
HOH
119
4
HOH
HOH
418
A
HOH
21
4
HOH
HOH
419
A
HOH
32
4
HOH
HOH
420
A
HOH
210
4
HOH
HOH
421
A
HOH
11
4
HOH
HOH
422
A
HOH
25
4
HOH
HOH
423
A
HOH
192
4
HOH
HOH
424
A
HOH
14
4
HOH
HOH
425
A
HOH
246
4
HOH
HOH
426
A
HOH
13
4
HOH
HOH
427
A
HOH
83
4
HOH
HOH
428
A
HOH
63
4
HOH
HOH
429
A
HOH
142
4
HOH
HOH
430
A
HOH
39
4
HOH
HOH
431
A
HOH
198
4
HOH
HOH
432
A
HOH
134
4
HOH
HOH
433
A
HOH
79
4
HOH
HOH
434
A
HOH
172
4
HOH
HOH
435
A
HOH
229
4
HOH
HOH
436
A
HOH
153
4
HOH
HOH
437
A
HOH
236
4
HOH
HOH
438
A
HOH
256
4
HOH
HOH
439
A
HOH
224
4
HOH
HOH
440
A
HOH
225
4
HOH
HOH
441
A
HOH
154
4
HOH
HOH
442
A
HOH
199
4
HOH
HOH
443
A
HOH
239
4
HOH
HOH
444
A
HOH
230
4
HOH
HOH
445
A
HOH
183
4
HOH
HOH
446
A
HOH
214
4
HOH
HOH
447
A
HOH
228
4
HOH
HOH
448
A
HOH
201
4
HOH
HOH
449
A
HOH
114
4
HOH
HOH
450
A
HOH
220
4
HOH
HOH
451
A
HOH
151
4
HOH
HOH
452
A
HOH
138
4
HOH
HOH
453
A
HOH
170
4
HOH
HOH
454
A
HOH
107
4
HOH
HOH
455
A
HOH
152
4
HOH
HOH
456
A
HOH
203
4
HOH
HOH
457
A
HOH
238
4
HOH
HOH
458
A
HOH
165
4
HOH
HOH
459
A
HOH
197
4
HOH
HOH
460
A
HOH
190
4
HOH
HOH
461
A
HOH
113
4
HOH
HOH
462
A
HOH
184
4
HOH
HOH
463
A
HOH
231
4
HOH
HOH
464
A
HOH
147
4
HOH
HOH
465
A
HOH
175
4
HOH
HOH
466
A
HOH
208
4
HOH
HOH
467
A
HOH
240
4
HOH
HOH
468
A
HOH
120
4
HOH
HOH
469
A
HOH
234
4
HOH
HOH
470
A
HOH
137
4
HOH
HOH
471
A
HOH
128
4
HOH
HOH
472
A
HOH
202
4
HOH
HOH
473
A
HOH
105
4
HOH
HOH
474
A
HOH
233
4
HOH
HOH
475
A
HOH
173
4
HOH
HOH
476
A
HOH
207
4
HOH
HOH
477
A
HOH
249
4
HOH
HOH
478
A
HOH
205
4
HOH
HOH
479
A
HOH
200
4
HOH
HOH
480
A
HOH
209
4
HOH
HOH
481
A
HOH
211
4
HOH
HOH
482
A
HOH
168
4
HOH
HOH
483
A
HOH
223
4
HOH
HOH
484
A
HOH
257
4
HOH
HOH
485
A
HOH
212
4
HOH
HOH
486
A
HOH
204
4
HOH
HOH
487
A
HOH
71
4
HOH
HOH
488
A
HOH
252
4
HOH
HOH
601
B
HOH
250
4
HOH
HOH
602
B
HOH
243
4
HOH
HOH
603
B
HOH
195
4
HOH
HOH
604
B
HOH
244
4
HOH
HOH
605
B
HOH
194
4
HOH
HOH
606
B
HOH
186
4
HOH
HOH
607
B
HOH
185
4
HOH
HOH
608
B
HOH
259
4
HOH
HOH
609
B
HOH
251
4
HOH
HOH
610
B
HOH
193
4
HOH
HOH
611
B
SER
42
n
1
SER
42
A
MET
43
n
2
MET
43
A
ASN
44
n
3
ASN
44
A
PRO
45
n
4
PRO
45
A
PRO
46
n
5
PRO
46
A
PRO
47
n
6
PRO
47
A
PRO
48
n
7
PRO
48
A
GLU
49
n
8
GLU
49
A
THR
50
n
9
THR
50
A
SER
51
n
10
SER
51
A
ASN
52
n
11
ASN
52
A
PRO
53
n
12
PRO
53
A
ASN
54
n
13
ASN
54
A
LYS
55
n
14
LYS
55
A
PRO
56
n
15
PRO
56
A
LYS
57
n
16
LYS
57
A
ARG
58
n
17
ARG
58
A
GLN
59
n
18
GLN
59
A
THR
60
n
19
THR
60
A
ASN
61
n
20
ASN
61
A
GLN
62
n
21
GLN
62
A
LEU
63
n
22
LEU
63
A
GLN
64
n
23
GLN
64
A
TYR
65
n
24
TYR
65
A
LEU
66
n
25
LEU
66
A
LEU
67
n
26
LEU
67
A
ARG
68
n
27
ARG
68
A
VAL
69
n
28
VAL
69
A
VAL
70
n
29
VAL
70
A
LEU
71
n
30
LEU
71
A
LYS
72
n
31
LYS
72
A
THR
73
n
32
THR
73
A
LEU
74
n
33
LEU
74
A
TRP
75
n
34
TRP
75
A
LYS
76
n
35
LYS
76
A
HIS
77
n
36
HIS
77
A
GLN
78
n
37
GLN
78
A
PHE
79
n
38
PHE
79
A
ALA
80
n
39
ALA
80
A
TRP
81
n
40
TRP
81
A
PRO
82
n
41
PRO
82
A
PHE
83
n
42
PHE
83
A
GLN
84
n
43
GLN
84
A
GLN
85
n
44
GLN
85
A
PRO
86
n
45
PRO
86
A
VAL
87
n
46
VAL
87
A
ASP
88
n
47
ASP
88
A
ALA
89
n
48
ALA
89
A
VAL
90
n
49
VAL
90
A
LYS
91
n
50
LYS
91
A
LEU
92
n
51
LEU
92
A
ASN
93
n
52
ASN
93
A
LEU
94
n
53
LEU
94
A
PRO
95
n
54
PRO
95
A
ASP
96
n
55
ASP
96
A
TYR
97
n
56
TYR
97
A
TYR
98
n
57
TYR
98
A
LYS
99
n
58
LYS
99
A
ILE
100
n
59
ILE
100
A
ILE
101
n
60
ILE
101
A
LYS
102
n
61
LYS
102
A
THR
103
n
62
THR
103
A
PRO
104
n
63
PRO
104
A
MET
105
n
64
MET
105
A
ASP
106
n
65
ASP
106
A
MET
107
n
66
MET
107
A
GLY
108
n
67
GLY
108
A
THR
109
n
68
THR
109
A
ILE
110
n
69
ILE
110
A
LYS
111
n
70
LYS
111
A
LYS
112
n
71
LYS
112
A
ARG
113
n
72
ARG
113
A
LEU
114
n
73
LEU
114
A
GLU
115
n
74
GLU
115
A
ASN
116
n
75
ASN
116
A
ASN
117
n
76
ASN
117
A
TYR
118
n
77
TYR
118
A
TYR
119
n
78
TYR
119
A
TRP
120
n
79
TRP
120
A
ASN
121
n
80
ASN
121
A
ALA
122
n
81
ALA
122
A
GLN
123
n
82
GLN
123
A
GLU
124
n
83
GLU
124
A
CYS
125
n
84
CYS
125
A
ILE
126
n
85
ILE
126
A
GLN
127
n
86
GLN
127
A
ASP
128
n
87
ASP
128
A
PHE
129
n
88
PHE
129
A
ASN
130
n
89
ASN
130
A
THR
131
n
90
THR
131
A
MET
132
n
91
MET
132
A
PHE
133
n
92
PHE
133
A
THR
134
n
93
THR
134
A
ASN
135
n
94
ASN
135
A
CYS
136
n
95
CYS
136
A
TYR
137
n
96
TYR
137
A
ILE
138
n
97
ILE
138
A
TYR
139
n
98
TYR
139
A
ASN
140
n
99
ASN
140
A
LYS
141
n
100
LYS
141
A
PRO
142
n
101
PRO
142
A
GLY
143
n
102
GLY
143
A
ASP
144
n
103
ASP
144
A
ASP
145
n
104
ASP
145
A
ILE
146
n
105
ILE
146
A
VAL
147
n
106
VAL
147
A
LEU
148
n
107
LEU
148
A
MET
149
n
108
MET
149
A
ALA
150
n
109
ALA
150
A
GLU
151
n
110
GLU
151
A
ALA
152
n
111
ALA
152
A
LEU
153
n
112
LEU
153
A
GLU
154
n
113
GLU
154
A
LYS
155
n
114
LYS
155
A
LEU
156
n
115
LEU
156
A
PHE
157
n
116
PHE
157
A
LEU
158
n
117
LEU
158
A
GLN
159
n
118
GLN
159
A
LYS
160
n
119
LYS
160
A
ILE
161
n
120
ILE
161
A
ASN
162
n
121
ASN
162
A
GLU
163
n
122
GLU
163
A
LEU
164
n
123
LEU
164
A
PRO
165
n
124
PRO
165
A
THR
166
n
125
THR
166
A
GLU
167
n
126
GLU
167
A
GLU
168
n
127
GLU
168
A
VAL
582
n
1
VAL
582
B
ALA
583
n
2
ALA
583
B
GLY
584
n
3
GLY
584
B
ALY
585
n
4
ALY
585
B
TYR
586
n
5
TYR
586
B
SER
587
n
6
SER
587
B
ALY
588
n
7
ALY
588
B
GLU
589
n
8
GLU
589
B
PHE
590
n
9
PHE
590
B
PHE
591
n
10
PHE
591
B
TYR
592
n
11
TYR
592
B
author_and_software_defined_assembly
PISA
2
dimeric
isothermal titration calorimetry
1070
0
8740
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
OG
SER
42
A
OG
SER
1
1
Y
1
A
CE
LYS
141
A
CE
LYS
100
1
Y
1
A
NZ
LYS
141
A
NZ
LYS
100
1
Y
1
A
B
O
O
HOH
HOH
408
610
1.69
1
A
A
O
O
HOH
HOH
354
439
1.78
1
A
A
O
O
HOH
HOH
361
408
1.80
1
A
A
O
O
HOH
HOH
361
384
1.85
1
B
B
O
O
HOH
HOH
601
610
1.89
1
B
B
OH
O
TYR
HOH
586
601
1.96
1
A
A
O
O
HOH
HOH
463
478
1.98
1
A
A
O
O
HOH
HOH
421
482
2.04
1
A
A
O
O
HOH
HOH
424
435
2.08
1
A
A
O
O
HOH
HOH
321
463
2.12
1
A
A
O
O
HOH
HOH
457
475
1.66
1_555
3_755
1
A
A
O
O
HOH
HOH
374
444
1.98
1_555
4_465
1
A
VAL
69
-109.81
-60.40
15.284
0.50
0.00
-0.00
-0.68
0.00
0.19
0.977
0.972
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.15773
0.12727
0.12872
1.20
40.87
2011
40641
4.7
99.87
1.075
0.022
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.035
0.036
0.80
0.80
1.20
2OSS
1.20
40.87
199
1368
8
0
1161
0.014
0.020
1248
0.002
0.020
1138
1.597
1.984
1699
1.011
3.000
2674
5.499
5.000
144
35.666
25.556
63
10.170
15.000
213
25.460
15.000
4
0.116
0.200
179
0.010
0.021
1355
0.002
0.020
237
1.687
2.416
565
1.648
2.411
564
1.920
4.545
705
1.922
4.550
706
3.237
3.090
683
3.237
3.090
683
3.661
5.497
992
3.446
18.108
1520
3.278
17.460
1475
2.333
3.000
2386
21.567
5.000
119
7.907
5.000
2430
0.201
0.175
1.231
159
2938
20
100.00
1.2
40.87
5NNG
42718
0.051
0.022
0.022
0.051
1
18.2
6.3
99.0
0.518
1.2
1.26
4.3
6132
38775
0.221
0.221
0.564
1
6.3
100.00
refinement
REFMAC
5.8.0158
data reduction
XDS
data scaling
SCALA
phasing
PHASER
model building
Coot
N
Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated SRPK1 peptide (K585ac)
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
THR
60
A
THR
19
HELX_P
A
VAL
69
A
VAL
28
1
AA1
10
A
VAL
69
A
VAL
28
HELX_P
A
LYS
76
A
LYS
35
1
AA2
8
A
ALA
80
A
ALA
39
HELX_P
A
GLN
84
A
GLN
43
5
AA3
5
A
ASP
96
A
ASP
55
HELX_P
A
ILE
101
A
ILE
60
1
AA4
6
A
ASP
106
A
ASP
65
HELX_P
A
ASN
116
A
ASN
75
1
AA5
11
A
ASN
121
A
ASN
80
HELX_P
A
ASN
140
A
ASN
99
1
AA6
20
A
ASP
144
A
ASP
103
HELX_P
A
ASN
162
A
ASN
121
1
AA7
19
covale
1.335
both
B
GLY
584
B
C
GLY
3
1_555
B
ALY
585
B
N
ALY
4
1_555
covale
1.322
both
B
ALY
585
B
C
ALY
4
1_555
B
TYR
586
B
N
TYR
5
1_555
covale
1.327
both
B
SER
587
B
C
SER
6
1_555
B
ALY
588
B
N
ALY
7
1_555
covale
1.340
both
B
ALY
588
B
C
ALY
7
1_555
B
GLU
589
B
N
GLU
8
1_555
TRANSCRIPTION
Bromodomain, transcription, complex, Structural Genomics, Structural Genomics Consortium, SGC
BRD4_HUMAN
UNP
1
44
O60885
NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ
ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
5NNG
PDB
2
1
5NNG
44
168
5NNG
44
168
O60885
A
1
3
127
582
592
5NNG
582
592
5NNG
B
2
1
11
1
expression tag
SER
42
5NNG
A
O60885
UNP
1
1
expression tag
MET
43
5NNG
A
O60885
UNP
2
binding site for residue EDO A 201
A
EDO
201
Software
6
binding site for residue EDO A 202
A
EDO
202
Software
1
binding site for Ligand residues ALY B 588 through GLU B 589 bound to SER B 587
B
ALY
588
Software
8
A
ILE
100
A
ILE
59
6
1_555
A
ILE
101
A
ILE
60
6
1_555
A
LYS
102
A
LYS
61
6
1_555
A
THR
103
A
THR
62
6
1_555
A
ASN
135
A
ASN
94
6
1_555
B
GLU
589
B
GLU
8
6
4_555
A
LYS
160
A
LYS
119
1
1_555
A
ASN
93
A
ASN
52
8
1_555
A
EDO
201
C
EDO
8
4_455
B
VAL
582
B
VAL
1
8
1_555
B
TYR
586
B
TYR
5
8
1_555
B
SER
587
B
SER
6
8
1_555
B
PHE
590
B
PHE
9
8
1_555
B
HOH
608
F
HOH
8
1_555
B
HOH
609
F
HOH
8
1_555
19
P 21 21 21