0.023969
0.000000
0.000000
-0.000000
0.018983
0.000000
0.000000
-0.000000
0.011213
0.00000
0.00000
0.00000
Georgiou, C.
Mcnae, I.W.
Ioannidis, H.
Julien, M.
Walkinshaw, M.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
41.720
52.680
89.180
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C4 H8 N2 O
100.119
1,3-diazinan-2-one
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C4 H12 N O3 1
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
O
N
184
N
C
N
185
N
N
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
N
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
N
N
221
S
C
N
222
N
C
N
223
N
O
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
N
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
S
N
252
N
C
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
N
N
266
S
C
N
267
N
C
N
268
N
O
N
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
Y
275
N
C
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
N
310
N
O
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
R
C
N
324
N
O
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
N
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
C
N
367
N
N
N
368
N
O
N
369
N
O
N
370
N
O
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
N
394
N
O
N
395
N
O
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
N
N
408
S
C
N
409
N
C
N
410
N
O
N
411
N
C
N
412
N
C
N
413
N
C
N
414
N
O
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
doub
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
Y
263
N
doub
Y
264
N
sing
Y
265
N
sing
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
doub
N
270
N
sing
Y
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
UK
J. Mol. Biol.
JMOBAK
0070
1089-8638
429
2556
2570
10.1016/j.jmb.2017.06.016
28673552
Pushing the Limits of Detection of Weak Binding Using Fragment-Based Drug Discovery: Identification of New Cyclophilin Binders.
2017
10.2210/pdb5nou/pdb
pdb_00005nou
100
1
PIXEL
2015-05-18
DECTRIS PILATUS 6M-F
SINGLE WAVELENGTH
M
x-ray
1
0.97949
1.0
I02
Diamond
0.97949
SYNCHROTRON
DIAMOND BEAMLINE I02
18036.504
Peptidyl-prolyl cis-trans isomerase A
5.2.1.8
1
man
polymer
100.119
1,3-diazinan-2-one
3
syn
non-polymer
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
1
nat
non-polymer
18.015
water
182
nat
water
PPIase A,Cyclophilin A,Cyclosporin A-binding protein,Rotamase A
no
no
MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYG
EKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE
MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYG
EKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
165
PPIA, CYPA
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
2.72
54.72
VAPOR DIFFUSION, HANGING DROP
8.0
PEG 8000, Tris-HCl
279.15
citation
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Data collection
Database references
Refinement description
1
0
2017-07-12
1
1
2017-08-16
1
2
2024-01-17
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.title
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United Kingdom
Biotechnology and Biological Sciences Research Council
N
PDBE
Y
PDBE
2017-04-13
REL
REL
1
A
O
HOH
479
6.66
1
A
O
HOH
480
6.69
1
A
O
HOH
481
6.86
1
A
O
HOH
482
7.02
L60
1,3-diazinan-2-one
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
HOH
water
5LUD
PDB
experimental model
L60
2
2
L60
L60
201
A
L60
3
2
L60
L60
202
A
L60
4
2
L60
L60
203
A
TRS
1
3
TRS
TRS
204
A
HOH
183
4
HOH
HOH
301
A
HOH
176
4
HOH
HOH
302
A
HOH
55
4
HOH
HOH
303
A
HOH
56
4
HOH
HOH
304
A
HOH
59
4
HOH
HOH
305
A
HOH
201
4
HOH
HOH
306
A
HOH
149
4
HOH
HOH
307
A
HOH
46
4
HOH
HOH
308
A
HOH
35
4
HOH
HOH
309
A
HOH
153
4
HOH
HOH
310
A
HOH
40
4
HOH
HOH
311
A
HOH
6
4
HOH
HOH
312
A
HOH
10
4
HOH
HOH
313
A
HOH
12
4
HOH
HOH
314
A
HOH
17
4
HOH
HOH
315
A
HOH
4
4
HOH
HOH
316
A
HOH
175
4
HOH
HOH
317
A
HOH
105
4
HOH
HOH
318
A
HOH
197
4
HOH
HOH
319
A
HOH
69
4
HOH
HOH
320
A
HOH
77
4
HOH
HOH
321
A
HOH
158
4
HOH
HOH
322
A
HOH
27
4
HOH
HOH
323
A
HOH
5
4
HOH
HOH
324
A
HOH
43
4
HOH
HOH
325
A
HOH
20
4
HOH
HOH
326
A
HOH
188
4
HOH
HOH
327
A
HOH
23
4
HOH
HOH
328
A
HOH
152
4
HOH
HOH
329
A
HOH
113
4
HOH
HOH
330
A
HOH
163
4
HOH
HOH
331
A
HOH
179
4
HOH
HOH
332
A
HOH
7
4
HOH
HOH
333
A
HOH
81
4
HOH
HOH
334
A
HOH
15
4
HOH
HOH
335
A
HOH
30
4
HOH
HOH
336
A
HOH
91
4
HOH
HOH
337
A
HOH
162
4
HOH
HOH
338
A
HOH
54
4
HOH
HOH
339
A
HOH
8
4
HOH
HOH
340
A
HOH
104
4
HOH
HOH
341
A
HOH
101
4
HOH
HOH
342
A
HOH
76
4
HOH
HOH
343
A
HOH
122
4
HOH
HOH
344
A
HOH
156
4
HOH
HOH
345
A
HOH
87
4
HOH
HOH
346
A
HOH
39
4
HOH
HOH
347
A
HOH
136
4
HOH
HOH
348
A
HOH
36
4
HOH
HOH
349
A
HOH
109
4
HOH
HOH
350
A
HOH
139
4
HOH
HOH
351
A
HOH
32
4
HOH
HOH
352
A
HOH
9
4
HOH
HOH
353
A
HOH
92
4
HOH
HOH
354
A
HOH
41
4
HOH
HOH
355
A
HOH
34
4
HOH
HOH
356
A
HOH
151
4
HOH
HOH
357
A
HOH
150
4
HOH
HOH
358
A
HOH
99
4
HOH
HOH
359
A
HOH
28
4
HOH
HOH
360
A
HOH
169
4
HOH
HOH
361
A
HOH
204
4
HOH
HOH
362
A
HOH
49
4
HOH
HOH
363
A
HOH
38
4
HOH
HOH
364
A
HOH
74
4
HOH
HOH
365
A
HOH
19
4
HOH
HOH
366
A
HOH
25
4
HOH
HOH
367
A
HOH
83
4
HOH
HOH
368
A
HOH
159
4
HOH
HOH
369
A
HOH
148
4
HOH
HOH
370
A
HOH
107
4
HOH
HOH
371
A
HOH
70
4
HOH
HOH
372
A
HOH
198
4
HOH
HOH
373
A
HOH
114
4
HOH
HOH
374
A
HOH
192
4
HOH
HOH
375
A
HOH
147
4
HOH
HOH
376
A
HOH
121
4
HOH
HOH
377
A
HOH
123
4
HOH
HOH
378
A
HOH
31
4
HOH
HOH
379
A
HOH
178
4
HOH
HOH
380
A
HOH
50
4
HOH
HOH
381
A
HOH
2
4
HOH
HOH
382
A
HOH
45
4
HOH
HOH
383
A
HOH
62
4
HOH
HOH
384
A
HOH
194
4
HOH
HOH
385
A
HOH
48
4
HOH
HOH
386
A
HOH
16
4
HOH
HOH
387
A
HOH
117
4
HOH
HOH
388
A
HOH
100
4
HOH
HOH
389
A
HOH
65
4
HOH
HOH
390
A
HOH
18
4
HOH
HOH
391
A
HOH
3
4
HOH
HOH
392
A
HOH
78
4
HOH
HOH
393
A
HOH
116
4
HOH
HOH
394
A
HOH
72
4
HOH
HOH
395
A
HOH
11
4
HOH
HOH
396
A
HOH
21
4
HOH
HOH
397
A
HOH
80
4
HOH
HOH
398
A
HOH
184
4
HOH
HOH
399
A
HOH
182
4
HOH
HOH
400
A
HOH
26
4
HOH
HOH
401
A
HOH
67
4
HOH
HOH
402
A
HOH
89
4
HOH
HOH
403
A
HOH
52
4
HOH
HOH
404
A
HOH
166
4
HOH
HOH
405
A
HOH
58
4
HOH
HOH
406
A
HOH
71
4
HOH
HOH
407
A
HOH
60
4
HOH
HOH
408
A
HOH
14
4
HOH
HOH
409
A
HOH
95
4
HOH
HOH
410
A
HOH
172
4
HOH
HOH
411
A
HOH
189
4
HOH
HOH
412
A
HOH
157
4
HOH
HOH
413
A
HOH
13
4
HOH
HOH
414
A
HOH
1
4
HOH
HOH
415
A
HOH
133
4
HOH
HOH
416
A
HOH
195
4
HOH
HOH
417
A
HOH
24
4
HOH
HOH
418
A
HOH
73
4
HOH
HOH
419
A
HOH
57
4
HOH
HOH
420
A
HOH
68
4
HOH
HOH
421
A
HOH
22
4
HOH
HOH
422
A
HOH
124
4
HOH
HOH
423
A
HOH
90
4
HOH
HOH
424
A
HOH
64
4
HOH
HOH
425
A
HOH
51
4
HOH
HOH
426
A
HOH
202
4
HOH
HOH
427
A
HOH
190
4
HOH
HOH
428
A
HOH
53
4
HOH
HOH
429
A
HOH
134
4
HOH
HOH
430
A
HOH
132
4
HOH
HOH
431
A
HOH
141
4
HOH
HOH
432
A
HOH
191
4
HOH
HOH
433
A
HOH
37
4
HOH
HOH
434
A
HOH
174
4
HOH
HOH
435
A
HOH
47
4
HOH
HOH
436
A
HOH
96
4
HOH
HOH
437
A
HOH
102
4
HOH
HOH
438
A
HOH
84
4
HOH
HOH
439
A
HOH
103
4
HOH
HOH
440
A
HOH
168
4
HOH
HOH
441
A
HOH
185
4
HOH
HOH
442
A
HOH
186
4
HOH
HOH
443
A
HOH
42
4
HOH
HOH
444
A
HOH
160
4
HOH
HOH
445
A
HOH
86
4
HOH
HOH
446
A
HOH
180
4
HOH
HOH
447
A
HOH
97
4
HOH
HOH
448
A
HOH
29
4
HOH
HOH
449
A
HOH
140
4
HOH
HOH
450
A
HOH
170
4
HOH
HOH
451
A
HOH
44
4
HOH
HOH
452
A
HOH
125
4
HOH
HOH
453
A
HOH
106
4
HOH
HOH
454
A
HOH
120
4
HOH
HOH
455
A
HOH
205
4
HOH
HOH
456
A
HOH
111
4
HOH
HOH
457
A
HOH
66
4
HOH
HOH
458
A
HOH
177
4
HOH
HOH
459
A
HOH
171
4
HOH
HOH
460
A
HOH
138
4
HOH
HOH
461
A
HOH
82
4
HOH
HOH
462
A
HOH
193
4
HOH
HOH
463
A
HOH
200
4
HOH
HOH
464
A
HOH
135
4
HOH
HOH
465
A
HOH
128
4
HOH
HOH
466
A
HOH
165
4
HOH
HOH
467
A
HOH
79
4
HOH
HOH
468
A
HOH
115
4
HOH
HOH
469
A
HOH
110
4
HOH
HOH
470
A
HOH
88
4
HOH
HOH
471
A
HOH
33
4
HOH
HOH
472
A
HOH
85
4
HOH
HOH
473
A
HOH
108
4
HOH
HOH
474
A
HOH
144
4
HOH
HOH
475
A
HOH
93
4
HOH
HOH
476
A
HOH
203
4
HOH
HOH
477
A
HOH
75
4
HOH
HOH
478
A
HOH
181
4
HOH
HOH
479
A
HOH
161
4
HOH
HOH
480
A
HOH
131
4
HOH
HOH
481
A
HOH
98
4
HOH
HOH
482
A
MET
1
n
1
MET
1
A
VAL
2
n
2
VAL
2
A
ASN
3
n
3
ASN
3
A
PRO
4
n
4
PRO
4
A
THR
5
n
5
THR
5
A
VAL
6
n
6
VAL
6
A
PHE
7
n
7
PHE
7
A
PHE
8
n
8
PHE
8
A
ASP
9
n
9
ASP
9
A
ILE
10
n
10
ILE
10
A
ALA
11
n
11
ALA
11
A
VAL
12
n
12
VAL
12
A
ASP
13
n
13
ASP
13
A
GLY
14
n
14
GLY
14
A
GLU
15
n
15
GLU
15
A
PRO
16
n
16
PRO
16
A
LEU
17
n
17
LEU
17
A
GLY
18
n
18
GLY
18
A
ARG
19
n
19
ARG
19
A
VAL
20
n
20
VAL
20
A
SER
21
n
21
SER
21
A
PHE
22
n
22
PHE
22
A
GLU
23
n
23
GLU
23
A
LEU
24
n
24
LEU
24
A
PHE
25
n
25
PHE
25
A
ALA
26
n
26
ALA
26
A
ASP
27
n
27
ASP
27
A
LYS
28
n
28
LYS
28
A
VAL
29
n
29
VAL
29
A
PRO
30
n
30
PRO
30
A
LYS
31
n
31
LYS
31
A
THR
32
n
32
THR
32
A
ALA
33
n
33
ALA
33
A
GLU
34
n
34
GLU
34
A
ASN
35
n
35
ASN
35
A
PHE
36
n
36
PHE
36
A
ARG
37
n
37
ARG
37
A
ALA
38
n
38
ALA
38
A
LEU
39
n
39
LEU
39
A
SER
40
n
40
SER
40
A
THR
41
n
41
THR
41
A
GLY
42
n
42
GLY
42
A
GLU
43
n
43
GLU
43
A
LYS
44
n
44
LYS
44
A
GLY
45
n
45
GLY
45
A
PHE
46
n
46
PHE
46
A
GLY
47
n
47
GLY
47
A
TYR
48
n
48
TYR
48
A
LYS
49
n
49
LYS
49
A
GLY
50
n
50
GLY
50
A
SER
51
n
51
SER
51
A
CYS
52
n
52
CYS
52
A
PHE
53
n
53
PHE
53
A
HIS
54
n
54
HIS
54
A
ARG
55
n
55
ARG
55
A
ILE
56
n
56
ILE
56
A
ILE
57
n
57
ILE
57
A
PRO
58
n
58
PRO
58
A
GLY
59
n
59
GLY
59
A
PHE
60
n
60
PHE
60
A
MET
61
n
61
MET
61
A
CYS
62
n
62
CYS
62
A
GLN
63
n
63
GLN
63
A
GLY
64
n
64
GLY
64
A
GLY
65
n
65
GLY
65
A
ASP
66
n
66
ASP
66
A
PHE
67
n
67
PHE
67
A
THR
68
n
68
THR
68
A
ARG
69
n
69
ARG
69
A
HIS
70
n
70
HIS
70
A
ASN
71
n
71
ASN
71
A
GLY
72
n
72
GLY
72
A
THR
73
n
73
THR
73
A
GLY
74
n
74
GLY
74
A
GLY
75
n
75
GLY
75
A
LYS
76
n
76
LYS
76
A
SER
77
n
77
SER
77
A
ILE
78
n
78
ILE
78
A
TYR
79
n
79
TYR
79
A
GLY
80
n
80
GLY
80
A
GLU
81
n
81
GLU
81
A
LYS
82
n
82
LYS
82
A
PHE
83
n
83
PHE
83
A
GLU
84
n
84
GLU
84
A
ASP
85
n
85
ASP
85
A
GLU
86
n
86
GLU
86
A
ASN
87
n
87
ASN
87
A
PHE
88
n
88
PHE
88
A
ILE
89
n
89
ILE
89
A
LEU
90
n
90
LEU
90
A
LYS
91
n
91
LYS
91
A
HIS
92
n
92
HIS
92
A
THR
93
n
93
THR
93
A
GLY
94
n
94
GLY
94
A
PRO
95
n
95
PRO
95
A
GLY
96
n
96
GLY
96
A
ILE
97
n
97
ILE
97
A
LEU
98
n
98
LEU
98
A
SER
99
n
99
SER
99
A
MET
100
n
100
MET
100
A
ALA
101
n
101
ALA
101
A
ASN
102
n
102
ASN
102
A
ALA
103
n
103
ALA
103
A
GLY
104
n
104
GLY
104
A
PRO
105
n
105
PRO
105
A
ASN
106
n
106
ASN
106
A
THR
107
n
107
THR
107
A
ASN
108
n
108
ASN
108
A
GLY
109
n
109
GLY
109
A
SER
110
n
110
SER
110
A
GLN
111
n
111
GLN
111
A
PHE
112
n
112
PHE
112
A
PHE
113
n
113
PHE
113
A
ILE
114
n
114
ILE
114
A
CYS
115
n
115
CYS
115
A
THR
116
n
116
THR
116
A
ALA
117
n
117
ALA
117
A
LYS
118
n
118
LYS
118
A
THR
119
n
119
THR
119
A
GLU
120
n
120
GLU
120
A
TRP
121
n
121
TRP
121
A
LEU
122
n
122
LEU
122
A
ASP
123
n
123
ASP
123
A
GLY
124
n
124
GLY
124
A
LYS
125
n
125
LYS
125
A
HIS
126
n
126
HIS
126
A
VAL
127
n
127
VAL
127
A
VAL
128
n
128
VAL
128
A
PHE
129
n
129
PHE
129
A
GLY
130
n
130
GLY
130
A
LYS
131
n
131
LYS
131
A
VAL
132
n
132
VAL
132
A
LYS
133
n
133
LYS
133
A
GLU
134
n
134
GLU
134
A
GLY
135
n
135
GLY
135
A
MET
136
n
136
MET
136
A
ASN
137
n
137
ASN
137
A
ILE
138
n
138
ILE
138
A
VAL
139
n
139
VAL
139
A
GLU
140
n
140
GLU
140
A
ALA
141
n
141
ALA
141
A
MET
142
n
142
MET
142
A
GLU
143
n
143
GLU
143
A
ARG
144
n
144
ARG
144
A
PHE
145
n
145
PHE
145
A
GLY
146
n
146
GLY
146
A
SER
147
n
147
SER
147
A
ARG
148
n
148
ARG
148
A
ASN
149
n
149
ASN
149
A
GLY
150
n
150
GLY
150
A
LYS
151
n
151
LYS
151
A
THR
152
n
152
THR
152
A
SER
153
n
153
SER
153
A
LYS
154
n
154
LYS
154
A
LYS
155
n
155
LYS
155
A
ILE
156
n
156
ILE
156
A
THR
157
n
157
THR
157
A
ILE
158
n
158
ILE
158
A
ALA
159
n
159
ALA
159
A
ASP
160
n
160
ASP
160
A
CYS
161
n
161
CYS
161
A
GLY
162
n
162
GLY
162
A
GLN
163
n
163
GLN
163
A
LEU
164
n
164
LEU
164
A
GLU
165
n
165
GLU
165
A
author_and_software_defined_assembly
PISA
1
monomeric
none
140
2
7870
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ARG
55
A
N
ARG
55
A
O
GLN
63
A
O
GLN
63
A
N
CYS
62
A
N
CYS
62
A
O
ILE
114
A
O
ILE
114
A
O
CYS
115
A
O
CYS
115
A
N
ILE
97
A
N
ILE
97
A
N
LEU
98
A
N
LEU
98
A
O
GLY
130
A
O
GLY
130
A
O
LYS
133
A
O
LYS
133
A
N
SER
21
A
N
SER
21
A
O
GLY
18
A
O
GLY
18
A
N
ILE
10
A
N
ILE
10
A
N
ASP
9
A
N
ASP
9
A
O
ASP
160
A
O
ASP
160
1
A
A
O
O
HOH
HOH
362
446
1.71
1
A
A
O
O
HOH
HOH
302
329
1.92
1
5.45
0.90
118.30
123.75
A
A
A
CB
CG
OD1
ASP
ASP
ASP
27
27
27
N
1
A
PHE
60
-124.14
-76.74
1
A
ASN
71
-151.35
8.34
1
A
LYS
82
-45.30
156.06
19.083
0.05
0.00
-0.00
-0.04
0.00
-0.01
0.978
0.971
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.16324
0.13213
0.13360
1.30
45.36
2297
45723
4.8
97.71
1.247
0.024
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.038
0.039
0.80
0.80
1.20
5LUD
MAXIMUM LIKELIHOOD
MASK
1.30
45.36
182
1477
29
0
1266
0.028
0.019
1326
0.002
0.020
1253
2.343
1.963
1775
1.196
3.000
2897
6.064
5.000
166
32.974
24.237
59
10.535
15.000
224
19.993
15.000
6
0.163
0.200
181
0.013
0.020
1528
0.002
0.020
324
2.898
1.555
668
2.898
1.554
668
3.205
2.319
828
3.203
2.321
829
4.338
1.928
658
4.339
1.928
658
5.587
2.753
947
5.564
14.379
1572
5.563
14.387
1573
6.035
3.000
2579
23.194
5.000
46
10.596
5.000
2687
0.283
0.280
1.334
156
2834
20
83.94
1.3
45.36
5NOU
48076
0.07
1
12.70
5.00
98.10
0.62
1.3
1.32
1.7
2103
1
3.2
84.1
refinement
REFMAC
5.8.0103
data scaling
SCALA
data extraction
PDB_EXTRACT
3.20
data reduction
MOSFLM
phasing
PHASER
N
Structure of cyclophilin A in complex with hexahydropyrimidin-2-one
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
VAL
29
A
VAL
29
HELX_P
A
GLY
42
A
GLY
42
1
AA1
14
A
THR
119
A
THR
119
HELX_P
A
ASP
123
A
ASP
123
5
AA2
5
A
GLY
135
A
GLY
135
HELX_P
A
ARG
144
A
ARG
144
1
AA3
10
ISOMERASE
LIGAND COMPLEX, BETA BARREL, PROLYL CIS/TRANS ISOMERASE, CYTOSOLIC, Isomerase
PPIA_HUMAN
UNP
1
1
P62937
MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYG
EKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE
1
165
5NOU
1
165
P62937
A
1
1
165
8
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
55
A
ARG
55
A
ILE
57
A
ILE
57
A
MET
61
A
MET
61
A
GLY
64
A
GLY
64
A
PHE
112
A
PHE
112
A
CYS
115
A
CYS
115
A
ILE
97
A
ILE
97
A
MET
100
A
MET
100
A
VAL
128
A
VAL
128
A
GLU
134
A
GLU
134
A
GLU
15
A
GLU
15
A
LEU
24
A
LEU
24
A
THR
5
A
THR
5
A
VAL
12
A
VAL
12
A
ILE
156
A
ILE
156
A
LEU
164
A
LEU
164
binding site for residue L60 A 201
A
L60
201
Software
6
binding site for residue L60 A 202
A
L60
202
Software
5
binding site for residue L60 A 203
A
L60
203
Software
5
binding site for residue TRS A 204
A
TRS
204
Software
9
A
ARG
55
A
ARG
55
6
1_555
A
PHE
60
A
PHE
60
6
1_555
A
MET
61
A
MET
61
6
1_555
A
GLN
63
A
GLN
63
6
1_555
A
PHE
113
A
PHE
113
6
1_555
A
HOH
386
F
HOH
6
1_555
A
LYS
31
A
LYS
31
5
1_555
A
TYR
79
A
TYR
79
5
1_555
A
LYS
125
A
LYS
125
5
4_455
A
HOH
462
F
HOH
5
1_455
A
HOH
469
F
HOH
5
1_455
A
LYS
91
A
LYS
91
5
1_555
A
THR
93
A
THR
93
5
1_555
A
ILE
97
A
ILE
97
5
1_555
A
HOH
398
F
HOH
5
1_555
A
HOH
410
F
HOH
5
1_555
A
GLU
86
A
GLU
86
9
1_555
A
ASN
87
A
ASN
87
9
1_555
A
ASN
102
A
ASN
102
9
4_455
A
ALA
103
A
ALA
103
9
4_455
A
GLY
104
A
GLY
104
9
4_455
A
ARG
148
A
ARG
148
9
1_455
A
HOH
348
F
HOH
9
1_555
A
HOH
445
F
HOH
9
4_455
A
HOH
453
F
HOH
9
1_455
19
P 21 21 21