0.010522
0.000000
0.000000
0.000000
0.008071
0.000000
0.000000
0.000000
0.019531
0.000000
0.000000
0.000000
Liu, Y.J.
Lilley, D.M.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
95.043
123.895
51.201
C31 H39 N2 O2 1
471.654
1-(3-hydroxypropyl)-2-{(1E,3E,5E)-5-[1-(3-hydroxypropyl)-3,3-dimethyl-1,3-dihydro-2H-indol-2-ylidene]penta-1,3-dien-1-y l}-3,3-dimethyl-3H-indolium
N,N'-(dipropyl)-tetramethylindodicarbocyanine
non-polymer
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
N
C
N
3
N
O
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
N
14
N
O
N
15
N
C
N
16
N
N
N
17
N
C
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
C
N
22
N
C
Y
23
N
C
Y
24
N
C
Y
25
N
C
Y
26
N
C
N
27
N
C
Y
28
N
C
Y
29
N
C
N
30
N
C
N
31
N
C
N
32
N
C
N
33
N
C
N
34
N
C
N
35
N
C
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
O
N
76
N
P
N
77
N
O
N
78
N
O
N
79
N
O
N
80
N
C
N
81
R
C
N
82
N
O
N
83
S
C
N
84
N
O
N
85
R
C
N
86
N
O
N
87
R
C
Y
88
N
N
Y
89
N
C
Y
90
N
N
Y
91
N
C
Y
92
N
C
N
93
N
N
Y
94
N
N
Y
95
N
C
Y
96
N
N
Y
97
N
C
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
N
N
113
S
C
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
N
N
126
S
C
N
127
N
C
N
128
N
O
N
129
N
C
N
130
N
C
N
131
N
C
N
132
N
N
N
133
N
C
N
134
N
N
N
135
N
N
N
136
N
O
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
S
C
N
154
N
C
N
155
N
O
N
156
N
C
N
157
N
C
N
158
N
O
N
159
N
N
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
O
N
176
N
O
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
O
N
186
N
P
N
187
N
O
N
188
N
O
N
189
N
O
N
190
N
C
N
191
R
C
N
192
N
O
N
193
S
C
N
194
N
O
N
195
R
C
N
196
N
O
N
197
R
C
N
198
N
N
N
199
N
C
N
200
N
O
N
201
N
N
N
202
N
C
N
203
N
N
N
204
N
C
N
205
N
C
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
O
N
221
N
P
N
222
N
O
N
223
N
O
N
224
N
O
N
225
N
C
N
226
R
C
N
227
N
O
N
228
S
C
N
229
N
O
N
230
R
C
N
231
N
O
N
232
R
C
Y
233
N
N
Y
234
N
C
Y
235
N
N
Y
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
C
N
241
N
N
N
242
N
N
Y
243
N
C
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
O
N
266
N
N
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
O
N
286
N
O
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
N
C
N
299
N
C
N
300
N
O
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
S
C
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
C
N
338
N
C
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
N
C
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
N
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
N
384
N
C
N
385
N
S
N
386
N
C
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
C
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
N
444
N
O
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
N
N
454
S
C
N
455
N
C
N
456
N
O
N
457
R
C
N
458
N
O
N
459
N
C
N
460
N
O
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
N
N
471
S
C
N
472
N
C
N
473
N
O
N
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
N
Y
479
N
C
Y
480
N
C
Y
481
N
C
Y
482
N
C
Y
483
N
C
N
484
N
O
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
N
N
498
S
C
N
499
N
C
N
500
N
O
N
501
N
C
Y
502
N
C
Y
503
N
C
Y
504
N
C
Y
505
N
C
Y
506
N
C
Y
507
N
C
N
508
N
O
N
509
N
O
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
H
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
O
N
522
N
P
N
523
N
O
N
524
N
O
N
525
N
O
N
526
N
C
N
527
R
C
N
528
N
O
N
529
S
C
N
530
N
O
N
531
R
C
N
532
N
O
N
533
R
C
N
534
N
N
N
535
N
C
N
536
N
O
N
537
N
N
N
538
N
C
N
539
N
O
N
540
N
C
N
541
N
C
N
542
N
H
N
543
N
H
N
544
N
H
N
545
N
H
N
546
N
H
N
547
N
H
N
548
N
H
N
549
N
H
N
550
N
H
N
551
N
H
N
552
N
H
N
553
N
H
N
554
N
H
N
555
N
N
N
556
S
C
N
557
N
C
N
558
N
O
N
559
N
C
N
560
N
C
N
561
N
C
N
562
N
O
N
563
N
H
N
564
N
H
N
565
N
H
N
566
N
H
N
567
N
H
N
568
N
H
N
569
N
H
N
570
N
H
N
571
N
H
N
572
N
H
N
573
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
Y
4
N
doub
Y
5
N
sing
N
6
N
sing
Y
7
N
sing
N
8
N
sing
N
9
N
sing
Y
10
N
doub
Y
11
N
doub
N
12
E
doub
N
13
N
sing
N
14
N
sing
Y
15
N
sing
N
16
N
sing
N
17
E
doub
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
E
doub
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
Y
30
N
doub
Y
31
N
sing
Y
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
Y
36
N
doub
Y
37
N
doub
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
Y
102
N
sing
Y
103
N
sing
Y
104
N
doub
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
doub
N
111
N
sing
N
112
N
sing
Y
113
N
sing
Y
114
N
doub
N
115
N
sing
Y
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
sing
Y
247
N
sing
Y
248
N
doub
N
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
Y
406
N
doub
Y
407
N
sing
Y
408
N
sing
N
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
doub
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
doub
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
Y
475
N
doub
Y
476
N
sing
Y
477
N
sing
N
478
N
sing
Y
479
N
doub
Y
480
N
sing
Y
481
N
sing
N
482
N
sing
Y
483
N
sing
Y
484
N
doub
N
485
N
sing
Y
486
N
doub
N
487
N
sing
Y
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
doub
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
Y
503
N
doub
Y
504
N
sing
Y
505
N
sing
N
506
N
sing
Y
507
N
doub
N
508
N
sing
Y
509
N
doub
N
510
N
sing
Y
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
doub
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
N
525
N
sing
N
526
N
sing
N
527
N
sing
N
528
N
sing
N
529
N
sing
N
530
N
sing
N
531
N
sing
N
532
N
sing
N
533
N
sing
N
534
N
sing
N
535
N
sing
N
536
N
sing
N
537
N
sing
N
538
N
sing
N
539
N
sing
N
540
N
sing
N
541
N
sing
N
542
N
doub
N
543
N
sing
N
544
N
sing
N
545
N
sing
N
546
N
doub
N
547
N
sing
N
548
N
doub
N
549
N
sing
N
550
N
sing
N
551
N
sing
N
552
N
sing
N
553
N
sing
N
554
N
sing
N
555
N
sing
N
556
N
sing
N
557
N
doub
N
558
N
sing
N
559
N
sing
N
560
N
sing
N
561
N
sing
N
562
N
sing
N
563
N
sing
N
564
N
sing
N
565
N
sing
N
566
N
sing
N
567
N
sing
N
568
N
sing
US
Biophys. J.
BIOJAU
0030
1542-0086
113
2336
2343
10.1016/j.bpj.2017.10.002
29211987
Crystal Structures of Cyanine Fluorophores Stacked onto the End of Double-Stranded RNA.
2017
10.2210/pdb5ns3/pdb
pdb_00005ns3
94
1
PIXEL
2014-02-25
DECTRIS PILATUS3 S 6M
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
ID23-1
ESRF
1
SYNCHROTRON
ESRF BEAMLINE ID23-1
20475.859
50S ribosomal protein L5
2
man
polymer
10995.998
double-stranded RNA
2
syn
polymer
18.015
water
14
nat
water
TL4,TthL5
no
no
VALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRK
GMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAE
TDEEARALLELLGFPFR
VALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRK
GMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAE
TDEEARALLELLGFPFR
A,B
polypeptide(L)
no
yes
(5CY)CGCACCUGACCCCAUGCCGAACUCAGAAGUGCG
XCGCACCUGACCCCAUGCCGAACUCAGAAGUGCG
C,D
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
177
rplE, rpl5
274
Thermus thermophilus
562
Escherichia coli
Biological sequence
1
2.42
49.11
VAPOR DIFFUSION
0.3 M Magnesium formate dehydrate
0.1 M BIS-TRIS pH 5.5
50mM KF
289
-8.104
1
19
C
26
C
58
-0.771
C_C26:G58_C
1
-7.298
0.114
0.025
-0.032
-1.588
1
19
C
27
C
57
0.811
C_G27:C57_C
2
-10.123
-0.292
0.126
-0.123
6.956
1
19
C
28
C
56
-1.263
C_C28:G56_C
3
-10.884
-0.139
0.030
-0.121
1.190
1
20
C
29
C
55
2.638
C_A29:U55_C
4
-13.474
-0.098
-0.015
-0.171
-4.981
1
19
C
30
C
54
5.329
C_C30:G54_C
5
-18.378
0.523
0.142
-0.028
1.685
1
19
C
31
C
51
2.173
C_C31:G51_C
6
-19.068
0.375
-0.090
-0.147
0.180
1
20
C
32
C
50
3.237
C_U32:A50_C
7
-12.968
-0.034
0.376
-0.122
-0.145
1
19
C
33
C
49
-2.666
C_G33:C49_C
8
-14.975
-0.084
0.424
-0.209
6.844
1
20
C
34
C
48
-1.242
C_A34:U48_C
9
-14.197
0.005
0.309
-0.056
7.339
1
19
C
38
C
44
-1.843
C_C38:G44_C
10
-13.538
0.042
0.276
-0.103
-26.802
5
C
39
C
46
60.329
C_A39:A46_C
11
-4.760
6.370
-0.205
-0.279
-7.289
C
40
C
45
7.110
C_U40:A45_C
12
14.445
6.708
1.195
-4.309
-1.233
1
19
D
26
D
58
3.097
D_C26:G58_D
13
-8.447
0.432
0.059
0.150
3.372
1
19
D
27
D
57
3.048
D_G27:C57_D
14
-13.120
-0.359
0.196
-0.111
8.209
1
19
D
28
D
56
0.758
D_C28:G56_D
15
-14.885
-0.075
-0.004
-0.091
-2.132
1
20
D
29
D
55
2.409
D_A29:U55_D
16
-12.186
-0.062
-0.140
-0.162
-4.760
1
19
D
30
D
54
4.843
D_C30:G54_D
17
-15.045
0.526
-0.093
-0.020
4.018
1
19
D
31
D
51
2.153
D_C31:G51_D
18
-22.574
0.393
-0.033
-0.158
1.062
1
20
D
32
D
50
4.154
D_U32:A50_D
19
-14.868
-0.033
0.379
-0.119
-0.492
1
19
D
33
D
49
-1.360
D_G33:C49_D
20
-15.812
-0.106
0.399
-0.202
5.460
1
20
D
34
D
48
-0.611
D_A34:U48_D
21
-13.957
0.045
0.275
-0.054
7.249
1
19
D
38
D
44
-2.933
D_C38:G44_D
22
-13.951
0.022
0.276
-0.118
-26.458
5
D
39
D
46
61.129
D_A39:A46_D
23
-4.509
6.374
-0.194
-0.293
-7.181
D
40
D
45
8.448
D_U40:A45_D
24
16.056
6.722
1.284
-4.335
2.624
27.761
C
C
26
27
13.186
C
C
58
57
3.121
6.274
-0.449
-1.910
CC_C26G27:C57G58_CC
1
-0.233
0.490
27.055
-5.325
0.885
2.924
30.540
C
C
27
28
9.000
C
C
57
56
3.137
4.720
-0.691
-1.389
CC_G27C28:G56C57_CC
2
-1.710
3.260
30.134
-3.511
0.995
2.611
33.047
C
C
28
29
20.763
C
C
56
55
3.359
11.569
0.053
-1.583
CC_C28A29:U55G56_CC
3
-1.432
2.570
30.976
-4.632
-0.321
2.998
36.895
C
C
29
30
9.915
C
C
55
54
3.274
6.242
0.776
-1.683
CC_A29C30:G54U55_CC
4
2.474
-3.930
36.300
-3.475
-0.903
3.039
57.733
C
C
30
31
13.921
C
C
54
51
4.237
13.201
2.758
-1.385
CC_C30C31:G51G54_CC
5
-15.349
16.186
54.356
-2.252
-3.807
2.745
33.831
C
C
31
32
16.849
C
C
51
50
3.318
9.662
0.158
-1.493
CC_C31U32:A50G51_CC
6
-3.052
5.321
32.320
-4.046
-0.739
2.492
28.004
C
C
32
33
14.762
C
C
50
49
3.054
7.069
-0.147
-1.878
CC_U32G33:C49A50_CC
7
0.290
-0.605
27.113
-5.323
0.362
2.857
36.171
C
C
33
34
7.024
C
C
49
48
3.009
4.351
-0.744
-1.283
CC_G33A34:U48C49_CC
8
-0.927
1.496
35.906
-2.618
1.081
3.152
130.734
C
C
34
38
-2.868
C
C
48
44
3.232
-5.214
-1.544
3.621
CC_A34C38:G44U48_CC
9
0.544
-0.299
130.679
2.028
0.853
3.162
-20.043
C
C
38
39
-24.706
C
C
44
46
3.811
5.926
-2.503
-1.062
CC_C38A39:A46G44_CC
10
18.985
79.147
-2.498
-2.211
9.670
1.853
31.759
C
C
39
40
16.493
C
C
46
45
3.004
8.831
-2.795
-1.202
CC_A39U40:A45A46_CC
11
7.334
-13.696
29.662
-3.443
6.143
2.392
26.097
D
D
26
27
17.783
D
D
58
57
3.070
7.888
-0.618
-1.984
DD_C26G27:C57G58_DD
12
-3.184
7.178
24.695
-6.243
0.622
2.931
32.425
D
D
27
28
9.308
D
D
57
56
3.166
5.174
-0.756
-1.514
DD_G27C28:G56C57_DD
13
-1.937
3.485
31.963
-3.566
1.033
2.553
33.841
D
D
28
29
23.981
D
D
56
55
3.455
13.586
-0.035
-1.599
DD_C28A29:U55G56_DD
14
-0.860
1.518
31.056
-4.852
-0.074
2.887
35.509
D
D
29
30
11.030
D
D
55
54
3.198
6.681
0.721
-1.688
DD_A29C30:G54U55_DD
15
3.158
-5.214
34.756
-3.687
-0.747
2.610
53.707
D
D
30
31
18.520
D
D
54
51
3.754
16.376
2.372
-1.457
DD_C30C31:G51G54_DD
16
-11.824
13.372
50.028
-2.650
-3.375
2.680
34.915
D
D
31
32
18.543
D
D
51
50
3.297
10.935
0.184
-1.420
DD_C31U32:A50G51_DD
17
-3.085
5.232
33.069
-3.923
-0.746
2.388
27.858
D
D
32
33
17.762
D
D
50
49
3.075
8.422
-0.096
-1.839
DD_U32G33:C49A50_DD
18
0.509
-1.074
26.574
-5.543
0.304
2.847
36.664
D
D
33
34
8.270
D
D
49
48
3.029
5.185
-0.729
-1.234
DD_G33A34:U48C49_DD
19
-0.783
1.248
36.300
-2.603
1.062
3.127
129.964
D
D
34
38
-2.768
D
D
48
44
3.206
-5.017
-1.558
3.571
DD_A34C38:G44U48_DD
20
0.915
-0.505
129.911
2.006
0.866
3.076
-19.442
D
D
38
39
-25.795
D
D
44
46
3.788
5.929
-2.504
-1.024
DD_C38A39:A46G44_DD
21
18.408
80.081
-2.007
-2.584
10.019
1.901
32.314
D
D
39
40
17.047
D
D
46
45
2.995
9.287
-2.778
-1.163
DD_A39U40:A45A46_DD
22
6.891
-12.648
30.225
-3.364
5.937
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Data collection
Database references
Structure summary
1
0
2017-12-20
1
1
2024-05-08
_chem_comp.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
PDBE
Y
PDBE
2017-04-25
REL
REL
HOH
water
274
Thermus thermophilus
sample
1
34
HOH
10
3
HOH
HOH
201
A
HOH
12
3
HOH
HOH
202
A
HOH
7
3
HOH
HOH
203
A
HOH
9
3
HOH
HOH
201
B
HOH
8
3
HOH
HOH
202
B
HOH
3
3
HOH
HOH
203
B
HOH
4
3
HOH
HOH
204
B
HOH
15
3
HOH
HOH
101
C
HOH
2
3
HOH
HOH
102
C
HOH
1
3
HOH
HOH
103
C
HOH
5
3
HOH
HOH
104
C
HOH
14
3
HOH
HOH
105
C
HOH
13
3
HOH
HOH
106
C
HOH
11
3
HOH
HOH
101
D
VAL
5
n
1
VAL
5
A
ALA
6
n
2
ALA
6
A
LEU
7
n
3
LEU
7
A
LYS
8
n
4
LYS
8
A
ARG
9
n
5
ARG
9
A
LYS
10
n
6
LYS
10
A
TYR
11
n
7
TYR
11
A
TYR
12
n
8
TYR
12
A
GLU
13
n
9
GLU
13
A
GLU
14
n
10
GLU
14
A
VAL
15
n
11
VAL
15
A
ARG
16
n
12
ARG
16
A
PRO
17
n
13
PRO
17
A
GLU
18
n
14
GLU
18
A
LEU
19
n
15
LEU
19
A
ILE
20
n
16
ILE
20
A
ARG
21
n
17
ARG
21
A
ARG
22
n
18
ARG
22
A
PHE
23
n
19
PHE
23
A
GLY
24
n
20
GLY
24
A
TYR
25
n
21
TYR
25
A
GLN
26
n
22
GLN
26
A
ASN
27
n
23
ASN
27
A
VAL
28
n
24
VAL
28
A
TRP
29
n
25
TRP
29
A
GLU
30
n
26
GLU
30
A
VAL
31
n
27
VAL
31
A
PRO
32
n
28
PRO
32
A
ARG
33
n
29
ARG
33
A
LEU
34
n
30
LEU
34
A
GLU
35
n
31
GLU
35
A
LYS
36
n
32
LYS
36
A
VAL
37
n
33
VAL
37
A
VAL
38
n
34
VAL
38
A
ILE
39
n
35
ILE
39
A
ASN
40
n
36
ASN
40
A
GLN
41
n
37
GLN
41
A
GLY
42
n
38
GLY
42
A
LEU
43
n
39
LEU
43
A
n
40
44
A
n
41
45
A
n
42
46
A
n
43
47
A
n
44
48
A
n
45
49
A
n
46
50
A
n
47
51
A
ILE
52
n
48
ILE
52
A
LEU
53
n
49
LEU
53
A
GLU
54
n
50
GLU
54
A
LYS
55
n
51
LYS
55
A
ALA
56
n
52
ALA
56
A
ALA
57
n
53
ALA
57
A
GLN
58
n
54
GLN
58
A
GLU
59
n
55
GLU
59
A
LEU
60
n
56
LEU
60
A
ALA
61
n
57
ALA
61
A
LEU
62
n
58
LEU
62
A
ILE
63
n
59
ILE
63
A
THR
64
n
60
THR
64
A
GLY
65
n
61
GLY
65
A
GLN
66
n
62
GLN
66
A
LYS
67
n
63
LYS
67
A
PRO
68
n
64
PRO
68
A
ALA
69
n
65
ALA
69
A
VAL
70
n
66
VAL
70
A
THR
71
n
67
THR
71
A
ARG
72
n
68
ARG
72
A
ALA
73
n
69
ALA
73
A
n
70
74
A
n
71
75
A
n
72
76
A
n
73
77
A
n
74
78
A
n
75
79
A
n
76
80
A
n
77
81
A
n
78
82
A
n
79
83
A
n
80
84
A
n
81
85
A
n
82
86
A
PRO
87
n
83
PRO
87
A
ILE
88
n
84
ILE
88
A
GLY
89
n
85
GLY
89
A
LEU
90
n
86
LEU
90
A
ARG
91
n
87
ARG
91
A
VAL
92
n
88
VAL
92
A
THR
93
n
89
THR
93
A
LEU
94
n
90
LEU
94
A
ARG
95
n
91
ARG
95
A
ARG
96
n
92
ARG
96
A
ASP
97
n
93
ASP
97
A
ARG
98
n
94
ARG
98
A
MET
99
n
95
MET
99
A
TRP
100
n
96
TRP
100
A
ILE
101
n
97
ILE
101
A
PHE
102
n
98
PHE
102
A
LEU
103
n
99
LEU
103
A
GLU
104
n
100
GLU
104
A
LYS
105
n
101
LYS
105
A
LEU
106
n
102
LEU
106
A
LEU
107
n
103
LEU
107
A
ASN
108
n
104
ASN
108
A
VAL
109
n
105
VAL
109
A
ALA
110
n
106
ALA
110
A
LEU
111
n
107
LEU
111
A
PRO
112
n
108
PRO
112
A
ARG
113
n
109
ARG
113
A
ILE
114
n
110
ILE
114
A
ARG
115
n
111
ARG
115
A
n
112
116
A
n
113
117
A
n
114
118
A
GLY
119
n
115
GLY
119
A
LEU
120
n
116
LEU
120
A
ASN
121
n
117
ASN
121
A
PRO
122
n
118
PRO
122
A
ASN
123
n
119
ASN
123
A
SER
124
n
120
SER
124
A
PHE
125
n
121
PHE
125
A
ASP
126
n
122
ASP
126
A
GLY
127
n
123
GLY
127
A
ARG
128
n
124
ARG
128
A
GLY
129
n
125
GLY
129
A
ASN
130
n
126
ASN
130
A
TYR
131
n
127
TYR
131
A
ASN
132
n
128
ASN
132
A
LEU
133
n
129
LEU
133
A
GLY
134
n
130
GLY
134
A
LEU
135
n
131
LEU
135
A
n
132
136
A
n
133
137
A
n
134
138
A
n
135
139
A
n
136
140
A
n
137
141
A
n
138
142
A
n
139
143
A
n
140
144
A
n
141
145
A
n
142
146
A
n
143
147
A
n
144
148
A
n
145
149
A
n
146
150
A
n
147
151
A
n
148
152
A
n
149
153
A
GLY
154
n
150
GLY
154
A
MET
155
n
151
MET
155
A
ASP
156
n
152
ASP
156
A
ILE
157
n
153
ILE
157
A
ALA
158
n
154
ALA
158
A
VAL
159
n
155
VAL
159
A
VAL
160
n
156
VAL
160
A
THR
161
n
157
THR
161
A
THR
162
n
158
THR
162
A
ALA
163
n
159
ALA
163
A
GLU
164
n
160
GLU
164
A
THR
165
n
161
THR
165
A
ASP
166
n
162
ASP
166
A
GLU
167
n
163
GLU
167
A
GLU
168
n
164
GLU
168
A
ALA
169
n
165
ALA
169
A
ARG
170
n
166
ARG
170
A
ALA
171
n
167
ALA
171
A
LEU
172
n
168
LEU
172
A
LEU
173
n
169
LEU
173
A
GLU
174
n
170
GLU
174
A
LEU
175
n
171
LEU
175
A
LEU
176
n
172
LEU
176
A
GLY
177
n
173
GLY
177
A
PHE
178
n
174
PHE
178
A
PRO
179
n
175
PRO
179
A
PHE
180
n
176
PHE
180
A
ARG
181
n
177
ARG
181
A
VAL
5
n
1
VAL
5
B
ALA
6
n
2
ALA
6
B
LEU
7
n
3
LEU
7
B
LYS
8
n
4
LYS
8
B
ARG
9
n
5
ARG
9
B
LYS
10
n
6
LYS
10
B
TYR
11
n
7
TYR
11
B
TYR
12
n
8
TYR
12
B
GLU
13
n
9
GLU
13
B
GLU
14
n
10
GLU
14
B
VAL
15
n
11
VAL
15
B
ARG
16
n
12
ARG
16
B
PRO
17
n
13
PRO
17
B
GLU
18
n
14
GLU
18
B
LEU
19
n
15
LEU
19
B
ILE
20
n
16
ILE
20
B
ARG
21
n
17
ARG
21
B
ARG
22
n
18
ARG
22
B
PHE
23
n
19
PHE
23
B
GLY
24
n
20
GLY
24
B
TYR
25
n
21
TYR
25
B
GLN
26
n
22
GLN
26
B
ASN
27
n
23
ASN
27
B
VAL
28
n
24
VAL
28
B
TRP
29
n
25
TRP
29
B
GLU
30
n
26
GLU
30
B
VAL
31
n
27
VAL
31
B
PRO
32
n
28
PRO
32
B
ARG
33
n
29
ARG
33
B
LEU
34
n
30
LEU
34
B
GLU
35
n
31
GLU
35
B
LYS
36
n
32
LYS
36
B
VAL
37
n
33
VAL
37
B
VAL
38
n
34
VAL
38
B
ILE
39
n
35
ILE
39
B
ASN
40
n
36
ASN
40
B
n
37
41
B
n
38
42
B
n
39
43
B
n
40
44
B
n
41
45
B
n
42
46
B
n
43
47
B
n
44
48
B
n
45
49
B
n
46
50
B
n
47
51
B
ILE
52
n
48
ILE
52
B
LEU
53
n
49
LEU
53
B
GLU
54
n
50
GLU
54
B
LYS
55
n
51
LYS
55
B
ALA
56
n
52
ALA
56
B
ALA
57
n
53
ALA
57
B
GLN
58
n
54
GLN
58
B
GLU
59
n
55
GLU
59
B
LEU
60
n
56
LEU
60
B
ALA
61
n
57
ALA
61
B
LEU
62
n
58
LEU
62
B
ILE
63
n
59
ILE
63
B
THR
64
n
60
THR
64
B
GLY
65
n
61
GLY
65
B
GLN
66
n
62
GLN
66
B
LYS
67
n
63
LYS
67
B
PRO
68
n
64
PRO
68
B
ALA
69
n
65
ALA
69
B
VAL
70
n
66
VAL
70
B
THR
71
n
67
THR
71
B
ARG
72
n
68
ARG
72
B
ALA
73
n
69
ALA
73
B
LYS
74
n
70
LYS
74
B
n
71
75
B
n
72
76
B
n
73
77
B
n
74
78
B
n
75
79
B
n
76
80
B
n
77
81
B
n
78
82
B
n
79
83
B
LYS
84
n
80
LYS
84
B
GLY
85
n
81
GLY
85
B
MET
86
n
82
MET
86
B
PRO
87
n
83
PRO
87
B
ILE
88
n
84
ILE
88
B
GLY
89
n
85
GLY
89
B
LEU
90
n
86
LEU
90
B
ARG
91
n
87
ARG
91
B
VAL
92
n
88
VAL
92
B
THR
93
n
89
THR
93
B
LEU
94
n
90
LEU
94
B
ARG
95
n
91
ARG
95
B
ARG
96
n
92
ARG
96
B
ASP
97
n
93
ASP
97
B
ARG
98
n
94
ARG
98
B
MET
99
n
95
MET
99
B
TRP
100
n
96
TRP
100
B
ILE
101
n
97
ILE
101
B
PHE
102
n
98
PHE
102
B
LEU
103
n
99
LEU
103
B
GLU
104
n
100
GLU
104
B
LYS
105
n
101
LYS
105
B
LEU
106
n
102
LEU
106
B
LEU
107
n
103
LEU
107
B
ASN
108
n
104
ASN
108
B
VAL
109
n
105
VAL
109
B
ALA
110
n
106
ALA
110
B
LEU
111
n
107
LEU
111
B
PRO
112
n
108
PRO
112
B
ARG
113
n
109
ARG
113
B
ILE
114
n
110
ILE
114
B
ARG
115
n
111
ARG
115
B
n
112
116
B
PHE
117
n
113
PHE
117
B
ARG
118
n
114
ARG
118
B
GLY
119
n
115
GLY
119
B
LEU
120
n
116
LEU
120
B
ASN
121
n
117
ASN
121
B
PRO
122
n
118
PRO
122
B
ASN
123
n
119
ASN
123
B
SER
124
n
120
SER
124
B
PHE
125
n
121
PHE
125
B
ASP
126
n
122
ASP
126
B
GLY
127
n
123
GLY
127
B
ARG
128
n
124
ARG
128
B
GLY
129
n
125
GLY
129
B
ASN
130
n
126
ASN
130
B
TYR
131
n
127
TYR
131
B
ASN
132
n
128
ASN
132
B
LEU
133
n
129
LEU
133
B
GLY
134
n
130
GLY
134
B
LEU
135
n
131
LEU
135
B
n
132
136
B
n
133
137
B
n
134
138
B
n
135
139
B
n
136
140
B
n
137
141
B
n
138
142
B
n
139
143
B
n
140
144
B
n
141
145
B
n
142
146
B
n
143
147
B
n
144
148
B
n
145
149
B
n
146
150
B
n
147
151
B
n
148
152
B
n
149
153
B
GLY
154
n
150
GLY
154
B
MET
155
n
151
MET
155
B
ASP
156
n
152
ASP
156
B
ILE
157
n
153
ILE
157
B
ALA
158
n
154
ALA
158
B
VAL
159
n
155
VAL
159
B
VAL
160
n
156
VAL
160
B
THR
161
n
157
THR
161
B
THR
162
n
158
THR
162
B
ALA
163
n
159
ALA
163
B
GLU
164
n
160
GLU
164
B
THR
165
n
161
THR
165
B
ASP
166
n
162
ASP
166
B
GLU
167
n
163
GLU
167
B
GLU
168
n
164
GLU
168
B
ALA
169
n
165
ALA
169
B
ARG
170
n
166
ARG
170
B
ALA
171
n
167
ALA
171
B
LEU
172
n
168
LEU
172
B
LEU
173
n
169
LEU
173
B
GLU
174
n
170
GLU
174
B
LEU
175
n
171
LEU
175
B
LEU
176
n
172
LEU
176
B
GLY
177
n
173
GLY
177
B
PHE
178
n
174
PHE
178
B
PRO
179
n
175
PRO
179
B
PHE
180
n
176
PHE
180
B
ARG
181
n
177
ARG
181
B
DRG
25
n
1
5CY
25
C
C
26
n
2
C
26
C
G
27
n
3
G
27
C
C
28
n
4
C
28
C
A
29
n
5
A
29
C
C
30
n
6
C
30
C
C
31
n
7
C
31
C
U
32
n
8
U
32
C
G
33
n
9
G
33
C
A
34
n
10
A
34
C
C
35
n
11
C
35
C
C
36
n
12
C
36
C
C
37
n
13
C
37
C
C
38
n
14
C
38
C
A
39
n
15
A
39
C
U
40
n
16
U
40
C
G
41
n
17
G
41
C
C
42
n
18
C
42
C
C
43
n
19
C
43
C
G
44
n
20
G
44
C
A
45
n
21
A
45
C
A
46
n
22
A
46
C
C
47
n
23
C
47
C
U
48
n
24
U
48
C
C
49
n
25
C
49
C
A
50
n
26
A
50
C
G
51
n
27
G
51
C
A
52
n
28
A
52
C
DA
53
n
29
A
53
C
G
54
n
30
G
54
C
U
55
n
31
U
55
C
G
56
n
32
G
56
C
C
57
n
33
C
57
C
G
58
n
34
G
58
C
DRG
25
n
1
5CY
25
D
C
26
n
2
C
26
D
G
27
n
3
G
27
D
C
28
n
4
C
28
D
A
29
n
5
A
29
D
C
30
n
6
C
30
D
C
31
n
7
C
31
D
U
32
n
8
U
32
D
G
33
n
9
G
33
D
A
34
n
10
A
34
D
n
11
35
D
C
36
n
12
C
36
D
C
37
n
13
C
37
D
C
38
n
14
C
38
D
A
39
n
15
A
39
D
U
40
n
16
U
40
D
G
41
n
17
G
41
D
C
42
n
18
C
42
D
C
43
n
19
C
43
D
G
44
n
20
G
44
D
A
45
n
21
A
45
D
A
46
n
22
A
46
D
C
47
n
23
C
47
D
U
48
n
24
U
48
D
C
49
n
25
C
49
D
A
50
n
26
A
50
D
G
51
n
27
G
51
D
n
28
52
D
A
53
n
29
A
53
D
G
54
n
30
G
54
D
U
55
n
31
U
55
D
G
56
n
32
G
56
D
C
57
n
33
C
57
D
G
58
n
34
G
58
D
author_and_software_defined_assembly
PISA
4
tetrameric
none
5810
-42
22950
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
71
A
N
THR
67
A
O
GLY
89
A
O
GLY
85
A
O
LEU
90
A
O
LEU
86
A
N
GLN
41
A
N
GLN
37
A
N
GLU
35
A
N
GLU
31
A
O
VAL
160
A
O
VAL
156
A
O
VAL
159
A
O
VAL
155
A
N
TYR
131
A
N
TYR
127
B
N
ALA
69
B
N
ALA
65
B
O
ARG
91
B
O
ARG
87
B
O
VAL
92
B
O
VAL
88
B
N
ILE
39
B
N
ILE
35
B
N
LYS
36
B
N
LYS
32
B
O
VAL
160
B
O
VAL
156
B
O
ILE
157
B
O
ILE
153
B
N
LEU
133
B
N
LEU
129
1
C
C8
G
41
C
C8
G
17
1
Y
1
C
N7
G
41
C
N7
G
17
1
Y
1
C
C5
G
41
C
C5
G
17
1
Y
1
C
C6
G
41
C
C6
G
17
1
Y
1
C
O6
G
41
C
O6
G
17
1
Y
1
C
N1
G
41
C
N1
G
17
1
Y
1
C
C2
G
41
C
C2
G
17
1
Y
1
C
N2
G
41
C
N2
G
17
1
Y
1
C
N3
G
41
C
N3
G
17
1
Y
1
C
C4
G
41
C
C4
G
17
1
Y
1
C
C5'
A
53
C
C5'
A
29
1
Y
1
C
C4'
A
53
C
C4'
A
29
1
Y
1
C
O4'
A
53
C
O4'
A
29
1
Y
1
C
C3'
A
53
C
C3'
A
29
1
Y
1
C
O3'
A
53
C
O3'
A
29
1
Y
1
C
C2'
A
53
C
C2'
A
29
1
Y
1
C
O2'
A
53
C
O2'
A
29
1
Y
1
C
C1'
A
53
C
C1'
A
29
1
Y
1
C
N9
A
53
C
N9
A
29
1
Y
1
C
C8
A
53
C
C8
A
29
1
Y
1
C
N7
A
53
C
N7
A
29
1
Y
1
C
C5
A
53
C
C5
A
29
1
Y
1
C
C6
A
53
C
C6
A
29
1
Y
1
C
N6
A
53
C
N6
A
29
1
Y
1
C
N1
A
53
C
N1
A
29
1
Y
1
C
C2
A
53
C
C2
A
29
1
Y
1
C
N3
A
53
C
N3
A
29
1
Y
1
C
C4
A
53
C
C4
A
29
1
Y
1
D
C1
5CY
25
D
C1
5CY
1
1
Y
1
D
O2
5CY
25
D
O2
5CY
1
1
Y
1
D
C2
5CY
25
D
C2
5CY
1
1
Y
1
D
N2
5CY
25
D
N2
5CY
1
1
Y
1
D
C23
5CY
25
D
C23
5CY
1
1
Y
1
D
C24
5CY
25
D
C24
5CY
1
1
Y
1
D
C25
5CY
25
D
C25
5CY
1
1
Y
1
D
C26
5CY
25
D
C26
5CY
1
1
Y
1
D
C27
5CY
25
D
C27
5CY
1
1
Y
1
D
C28
5CY
25
D
C28
5CY
1
1
Y
1
D
C29
5CY
25
D
C29
5CY
1
1
Y
1
D
C3
5CY
25
D
C3
5CY
1
1
Y
1
D
C30
5CY
25
D
C30
5CY
1
1
Y
1
D
C31
5CY
25
D
C31
5CY
1
1
Y
1
D
C4
5CY
25
D
C4
5CY
1
1
Y
1
D
C5
5CY
25
D
C5
5CY
1
1
Y
1
D
C6
5CY
25
D
C6
5CY
1
1
Y
1
D
C7
5CY
25
D
C7
5CY
1
1
Y
1
D
C8
5CY
25
D
C8
5CY
1
1
Y
1
D
C9
5CY
25
D
C9
5CY
1
1
Y
1
D
C8
G
41
D
C8
G
17
1
Y
1
D
N7
G
41
D
N7
G
17
1
Y
1
D
C5
G
41
D
C5
G
17
1
Y
1
D
C6
G
41
D
C6
G
17
1
Y
1
D
O6
G
41
D
O6
G
17
1
Y
1
D
N1
G
41
D
N1
G
17
1
Y
1
D
C2
G
41
D
C2
G
17
1
Y
1
D
N2
G
41
D
N2
G
17
1
Y
1
D
N3
G
41
D
N3
G
17
1
Y
1
D
C4
G
41
D
C4
G
17
1
Y
1
A
GLY
44
A
GLY
40
1
Y
1
A
GLU
45
A
GLU
41
1
Y
1
A
ALA
46
A
ALA
42
1
Y
1
A
LYS
47
A
LYS
43
1
Y
1
A
GLU
48
A
GLU
44
1
Y
1
A
ASP
49
A
ASP
45
1
Y
1
A
ALA
50
A
ALA
46
1
Y
1
A
ARG
51
A
ARG
47
1
Y
1
A
LYS
74
A
LYS
70
1
Y
1
A
LYS
75
A
LYS
71
1
Y
1
A
SER
76
A
SER
72
1
Y
1
A
ILE
77
A
ILE
73
1
Y
1
A
SER
78
A
SER
74
1
Y
1
A
ASN
79
A
ASN
75
1
Y
1
A
PHE
80
A
PHE
76
1
Y
1
A
LYS
81
A
LYS
77
1
Y
1
A
LEU
82
A
LEU
78
1
Y
1
A
ARG
83
A
ARG
79
1
Y
1
A
LYS
84
A
LYS
80
1
Y
1
A
GLY
85
A
GLY
81
1
Y
1
A
MET
86
A
MET
82
1
Y
1
A
ASP
116
A
ASP
112
1
Y
1
A
PHE
117
A
PHE
113
1
Y
1
A
ARG
118
A
ARG
114
1
Y
1
A
ARG
136
A
ARG
132
1
Y
1
A
GLU
137
A
GLU
133
1
Y
1
A
GLN
138
A
GLN
134
1
Y
1
A
LEU
139
A
LEU
135
1
Y
1
A
ILE
140
A
ILE
136
1
Y
1
A
PHE
141
A
PHE
137
1
Y
1
A
PRO
142
A
PRO
138
1
Y
1
A
GLU
143
A
GLU
139
1
Y
1
A
ILE
144
A
ILE
140
1
Y
1
A
THR
145
A
THR
141
1
Y
1
A
TYR
146
A
TYR
142
1
Y
1
A
ASP
147
A
ASP
143
1
Y
1
A
MET
148
A
MET
144
1
Y
1
A
VAL
149
A
VAL
145
1
Y
1
A
ASP
150
A
ASP
146
1
Y
1
A
ALA
151
A
ALA
147
1
Y
1
A
LEU
152
A
LEU
148
1
Y
1
A
ARG
153
A
ARG
149
1
Y
1
B
GLN
41
B
GLN
37
1
Y
1
B
GLY
42
B
GLY
38
1
Y
1
B
LEU
43
B
LEU
39
1
Y
1
B
GLY
44
B
GLY
40
1
Y
1
B
GLU
45
B
GLU
41
1
Y
1
B
ALA
46
B
ALA
42
1
Y
1
B
LYS
47
B
LYS
43
1
Y
1
B
GLU
48
B
GLU
44
1
Y
1
B
ASP
49
B
ASP
45
1
Y
1
B
ALA
50
B
ALA
46
1
Y
1
B
ARG
51
B
ARG
47
1
Y
1
B
LYS
75
B
LYS
71
1
Y
1
B
SER
76
B
SER
72
1
Y
1
B
ILE
77
B
ILE
73
1
Y
1
B
SER
78
B
SER
74
1
Y
1
B
ASN
79
B
ASN
75
1
Y
1
B
PHE
80
B
PHE
76
1
Y
1
B
LYS
81
B
LYS
77
1
Y
1
B
LEU
82
B
LEU
78
1
Y
1
B
ARG
83
B
ARG
79
1
Y
1
B
ASP
116
B
ASP
112
1
Y
1
B
ARG
136
B
ARG
132
1
Y
1
B
GLU
137
B
GLU
133
1
Y
1
B
GLN
138
B
GLN
134
1
Y
1
B
LEU
139
B
LEU
135
1
Y
1
B
ILE
140
B
ILE
136
1
Y
1
B
PHE
141
B
PHE
137
1
Y
1
B
PRO
142
B
PRO
138
1
Y
1
B
GLU
143
B
GLU
139
1
Y
1
B
ILE
144
B
ILE
140
1
Y
1
B
THR
145
B
THR
141
1
Y
1
B
TYR
146
B
TYR
142
1
Y
1
B
ASP
147
B
ASP
143
1
Y
1
B
MET
148
B
MET
144
1
Y
1
B
VAL
149
B
VAL
145
1
Y
1
B
ASP
150
B
ASP
146
1
Y
1
B
ALA
151
B
ALA
147
1
Y
1
B
LEU
152
B
LEU
148
1
Y
1
B
ARG
153
B
ARG
149
1
Y
1
D
C
35
D
C
11
1
Y
1
D
A
52
D
A
28
1
Y
1
C
C
O1
P
5CY
C
25
26
1.27
1
3.24
0.50
120.30
123.54
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
128
128
128
N
1
A
ARG
96
55.50
-138.43
1
A
ARG
113
-102.37
63.33
1
A
SER
124
-82.51
33.07
1
B
ARG
96
57.81
-141.80
117.570
35.2941
20.000
0.2745
0.2519
0.2530
2.4000
47.5210
1227
24293
5.0500
99.6600
0.3100
1
FREE R-VALUE
1.360
29.1800
0.9000
1.1100
ML
FLAT BULK SOLVENT MODEL
2.4000
47.5210
14
3597
44.26
0
1370
2213
339
49.61
1.987
47.52
5NS3
278257
42321
0.995
0.07599
0.08279
1
15.77
6.6
99.0
1.275
1.987
2.058
1.44
26351
4055
0.561
1.386
1
6.5
97.0
refinement
REFMAC
data scaling
Aimless
data extraction
PDB_EXTRACT
3.22
data reduction
xia2
phasing
PHENIX
N
Crystal structures of Cy5 cyanine fluorophores stacked onto the end of double-stranded RNA
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
VAL
5
A
VAL
1
HELX_P
A
GLU
14
A
GLU
10
1
AA1
10
A
GLU
14
A
GLU
10
HELX_P
A
GLY
24
A
GLY
20
1
AA2
11
A
ASN
27
A
ASN
23
HELX_P
A
VAL
31
A
VAL
27
5
AA3
5
A
LEU
53
A
LEU
49
HELX_P
A
GLY
65
A
GLY
61
1
AA4
13
A
ARG
95
A
ARG
91
HELX_P
A
VAL
109
A
VAL
105
1
AA5
15
A
THR
165
A
THR
161
HELX_P
A
LEU
176
A
LEU
172
1
AA6
12
B
ALA
6
B
ALA
2
HELX_P
B
GLU
14
B
GLU
10
1
AA7
9
B
GLU
14
B
GLU
10
HELX_P
B
GLY
24
B
GLY
20
1
AA8
11
B
ASN
27
B
ASN
23
HELX_P
B
VAL
31
B
VAL
27
5
AA9
5
B
LEU
53
B
LEU
49
HELX_P
B
GLY
65
B
GLY
61
1
AB1
13
B
ARG
95
B
ARG
91
HELX_P
B
VAL
109
B
VAL
105
1
AB2
15
B
VAL
109
B
VAL
105
HELX_P
B
ILE
114
B
ILE
110
1
AB3
6
B
THR
165
B
THR
161
HELX_P
B
GLY
177
B
GLY
173
1
AB4
13
hydrog
WATSON-CRICK
C
C
26
C
N3
C
2
1_555
C
G
58
C
N1
G
34
1_555
hydrog
WATSON-CRICK
C
C
26
C
N4
C
2
1_555
C
G
58
C
O6
G
34
1_555
hydrog
WATSON-CRICK
C
C
26
C
O2
C
2
1_555
C
G
58
C
N2
G
34
1_555
hydrog
WATSON-CRICK
C
G
27
C
N1
G
3
1_555
C
C
57
C
N3
C
33
1_555
hydrog
WATSON-CRICK
C
G
27
C
N2
G
3
1_555
C
C
57
C
O2
C
33
1_555
hydrog
WATSON-CRICK
C
G
27
C
O6
G
3
1_555
C
C
57
C
N4
C
33
1_555
hydrog
WATSON-CRICK
C
C
28
C
N3
C
4
1_555
C
G
56
C
N1
G
32
1_555
hydrog
WATSON-CRICK
C
C
28
C
N4
C
4
1_555
C
G
56
C
O6
G
32
1_555
hydrog
WATSON-CRICK
C
C
28
C
O2
C
4
1_555
C
G
56
C
N2
G
32
1_555
hydrog
WATSON-CRICK
C
A
29
C
N1
A
5
1_555
C
U
55
C
N3
U
31
1_555
hydrog
WATSON-CRICK
C
A
29
C
N6
A
5
1_555
C
U
55
C
O4
U
31
1_555
hydrog
WATSON-CRICK
C
C
30
C
N3
C
6
1_555
C
G
54
C
N1
G
30
1_555
hydrog
WATSON-CRICK
C
C
30
C
N4
C
6
1_555
C
G
54
C
O6
G
30
1_555
hydrog
WATSON-CRICK
C
C
30
C
O2
C
6
1_555
C
G
54
C
N2
G
30
1_555
hydrog
WATSON-CRICK
C
C
31
C
N3
C
7
1_555
C
G
51
C
N1
G
27
1_555
hydrog
WATSON-CRICK
C
C
31
C
N4
C
7
1_555
C
G
51
C
O6
G
27
1_555
hydrog
WATSON-CRICK
C
C
31
C
O2
C
7
1_555
C
G
51
C
N2
G
27
1_555
hydrog
C-A MISPAIR
C
C
31
C
O2
C
7
1_555
C
A
52
C
N6
A
28
1_555
hydrog
WATSON-CRICK
C
U
32
C
N3
U
8
1_555
C
A
50
C
N1
A
26
1_555
hydrog
WATSON-CRICK
C
U
32
C
O4
U
8
1_555
C
A
50
C
N6
A
26
1_555
hydrog
WATSON-CRICK
C
G
33
C
N1
G
9
1_555
C
C
49
C
N3
C
25
1_555
hydrog
WATSON-CRICK
C
G
33
C
N2
G
9
1_555
C
C
49
C
O2
C
25
1_555
hydrog
WATSON-CRICK
C
G
33
C
O6
G
9
1_555
C
C
49
C
N4
C
25
1_555
hydrog
WATSON-CRICK
C
A
34
C
N1
A
10
1_555
C
U
48
C
N3
U
24
1_555
hydrog
WATSON-CRICK
C
A
34
C
N6
A
10
1_555
C
U
48
C
O4
U
24
1_555
hydrog
C-C MISPAIR
C
C
36
C
N4
C
12
1_555
C
C
49
C
O2
C
25
1_555
hydrog
C-U MISPAIR
C
C
37
C
N4
C
13
1_555
C
U
48
C
O2
U
24
1_555
hydrog
WATSON-CRICK
C
C
38
C
N3
C
14
1_555
C
G
44
C
N1
G
20
1_555
hydrog
WATSON-CRICK
C
C
38
C
N4
C
14
1_555
C
G
44
C
O6
G
20
1_555
hydrog
WATSON-CRICK
C
C
38
C
O2
C
14
1_555
C
G
44
C
N2
G
20
1_555
hydrog
A-A MISPAIR
C
A
39
C
N3
A
15
1_555
C
A
46
C
N6
A
22
1_555
hydrog
U-A PAIR
C
U
40
C
O2
U
16
1_555
C
A
45
C
N6
A
21
1_555
hydrog
G-C PAIR
C
G
44
C
N2
G
20
1_555
C
C
47
C
N3
C
23
1_555
hydrog
WATSON-CRICK
D
C
26
D
N3
C
2
1_555
D
G
58
D
N1
G
34
1_555
hydrog
WATSON-CRICK
D
C
26
D
N4
C
2
1_555
D
G
58
D
O6
G
34
1_555
hydrog
WATSON-CRICK
D
C
26
D
O2
C
2
1_555
D
G
58
D
N2
G
34
1_555
hydrog
WATSON-CRICK
D
G
27
D
N1
G
3
1_555
D
C
57
D
N3
C
33
1_555
hydrog
WATSON-CRICK
D
G
27
D
N2
G
3
1_555
D
C
57
D
O2
C
33
1_555
hydrog
WATSON-CRICK
D
G
27
D
O6
G
3
1_555
D
C
57
D
N4
C
33
1_555
hydrog
WATSON-CRICK
D
C
28
D
N3
C
4
1_555
D
G
56
D
N1
G
32
1_555
hydrog
WATSON-CRICK
D
C
28
D
N4
C
4
1_555
D
G
56
D
O6
G
32
1_555
hydrog
WATSON-CRICK
D
C
28
D
O2
C
4
1_555
D
G
56
D
N2
G
32
1_555
hydrog
WATSON-CRICK
D
A
29
D
N1
A
5
1_555
D
U
55
D
N3
U
31
1_555
hydrog
WATSON-CRICK
D
A
29
D
N6
A
5
1_555
D
U
55
D
O4
U
31
1_555
hydrog
WATSON-CRICK
D
C
30
D
N3
C
6
1_555
D
G
54
D
N1
G
30
1_555
hydrog
WATSON-CRICK
D
C
30
D
N4
C
6
1_555
D
G
54
D
O6
G
30
1_555
hydrog
WATSON-CRICK
D
C
30
D
O2
C
6
1_555
D
G
54
D
N2
G
30
1_555
hydrog
WATSON-CRICK
D
C
31
D
N3
C
7
1_555
D
G
51
D
N1
G
27
1_555
hydrog
WATSON-CRICK
D
C
31
D
N4
C
7
1_555
D
G
51
D
O6
G
27
1_555
hydrog
WATSON-CRICK
D
C
31
D
O2
C
7
1_555
D
G
51
D
N2
G
27
1_555
hydrog
C-A MISPAIR
D
C
31
D
O2
C
7
1_555
D
A
53
D
N6
A
29
1_555
hydrog
WATSON-CRICK
D
U
32
D
N3
U
8
1_555
D
A
50
D
N1
A
26
1_555
hydrog
WATSON-CRICK
D
U
32
D
O4
U
8
1_555
D
A
50
D
N6
A
26
1_555
hydrog
WATSON-CRICK
D
G
33
D
N1
G
9
1_555
D
C
49
D
N3
C
25
1_555
hydrog
WATSON-CRICK
D
G
33
D
N2
G
9
1_555
D
C
49
D
O2
C
25
1_555
hydrog
WATSON-CRICK
D
G
33
D
O6
G
9
1_555
D
C
49
D
N4
C
25
1_555
hydrog
WATSON-CRICK
D
A
34
D
N1
A
10
1_555
D
U
48
D
N3
U
24
1_555
hydrog
WATSON-CRICK
D
A
34
D
N6
A
10
1_555
D
U
48
D
O4
U
24
1_555
hydrog
C-U MISPAIR
D
C
37
D
N4
C
13
1_555
D
U
48
D
O2
U
24
1_555
hydrog
WATSON-CRICK
D
C
38
D
N3
C
14
1_555
D
G
44
D
N1
G
20
1_555
hydrog
WATSON-CRICK
D
C
38
D
N4
C
14
1_555
D
G
44
D
O6
G
20
1_555
hydrog
WATSON-CRICK
D
C
38
D
O2
C
14
1_555
D
G
44
D
N2
G
20
1_555
hydrog
A-A MISPAIR
D
A
39
D
N3
A
15
1_555
D
A
46
D
N6
A
22
1_555
hydrog
U-A PAIR
D
U
40
D
O2
U
16
1_555
D
A
45
D
N6
A
21
1_555
hydrog
G-C PAIR
D
G
44
D
N2
G
20
1_555
D
C
47
D
N3
C
23
1_555
hydrog
G-A MISPAIR
D
G
51
D
N3
G
27
1_555
D
A
53
D
N6
A
29
1_555
RNA
Cy5, fluorophore, RNA
RL5_THETH
UNP
1
5
P41201
VALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRK
GMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAE
TDEEARALLELLGFPFR
5NS3
PDB
2
1
5NS3
5
181
5NS3
5
181
P41201
A
1
1
177
5
181
5NS3
5
181
P41201
B
1
1
177
25
58
5NS3
25
58
5NS3
C
2
1
34
25
58
5NS3
25
58
5NS3
D
2
1
34
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
69
A
ALA
65
A
THR
71
A
THR
67
A
GLY
89
A
GLY
85
A
LEU
94
A
LEU
90
A
LEU
34
A
LEU
30
A
GLY
42
A
GLY
38
A
MET
155
A
MET
151
A
THR
161
A
THR
157
A
TYR
131
A
TYR
127
A
GLY
134
A
GLY
130
B
ALA
69
B
ALA
65
B
ARG
72
B
ARG
68
B
PRO
87
B
PRO
83
B
LEU
94
B
LEU
90
B
LEU
34
B
LEU
30
B
ASN
40
B
ASN
36
B
ASP
156
B
ASP
152
B
THR
161
B
THR
157
B
TYR
131
B
TYR
127
B
GLY
134
B
GLY
130
18
P 21 21 2