0.029742
0.000000
0.000000
0.000000
0.028958
0.000000
0.000000
0.000000
0.023217
0.00000
0.00000
0.00000
Cuypers, M.G.
Mason, S.A.
Mossou, E.
Haertlein, M.
Forsyth, V.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
33.622
34.533
43.071
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
Fe 3
55.845
FE (III) ION
non-polymer
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To Be Published
0353
The cryofrozen atomic resolution X-ray crystal structure of perdeuterated Pyrococcus furiosus Rubredoxin (100K, 0.59A resolution)
100
1
PIXEL
2012-07-01
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.619920
1.0
ID29
ESRF
0.619920
SYNCHROTRON
ESRF BEAMLINE ID29
6031.728
Rubredoxin
1
man
polymer
55.845
FE (III) ION
1
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
39.098
POTASSIUM ION
1
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
18.015
water
184
nat
water
Rd
no
no
MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED
MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1
sample
1
54
rub, PF1282
186497
Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
866768
Escherichia coli 'BL21-Gold(DE3)pLysS AG'
pET28
Biological sequence
1
2.07
40.66
VAPOR DIFFUSION, HANGING DROP
6.5
seeded 3.4M equimolar Na/K phosphate buffer
293
controlled room t.
pdbx_audit_support
repository
Initial release
Author supporting evidence
1
0
2017-06-07
1
1
2017-09-13
_pdbx_audit_support.funding_organization
United Kingdom
Engineering and Physical Sciences Research Council
France
ILL
N
PDBE
Y
PDBE
2017-05-04
REL
REL
1
A
O
HOH
368
5.98
1
A
O
HOH
369
6.18
1
A
O
HOH
370
6.20
1
A
O
HOH
371
6.28
1
A
O
HOH
372
6.49
1
A
O
HOH
373
6.52
1
A
O
HOH
374
6.64
1
A
O
HOH
375
6.69
1
A
O
HOH
376
6.82
1
A
O
HOH
377
A
6.87
1
A
O
HOH
378
6.90
1
A
O
HOH
379
6.92
1
A
O
HOH
380
A
7.15
1
A
O
HOH
381
8.22
1
A
O
HOH
382
A
8.25
1
A
O
HOH
383
9.20
1
A
O
HOH
384
10.52
FE
FE (III) ION
NA
SODIUM ION
K
POTASSIUM ION
PO4
PHOSPHATE ION
HOH
water
FE
1
2
FE
FE
101
A
NA
2
3
NA
NA
102
A
K
2
4
K
K
103
A
PO4
1
5
PO4
PO4
104
A
HOH
205
6
HOH
HOH
201
A
HOH
91
6
HOH
HOH
202
A
HOH
208
6
HOH
HOH
203
A
HOH
78
6
HOH
HOH
204
A
HOH
39
6
HOH
HOH
205
A
HOH
75
6
HOH
HOH
206
A
HOH
187
6
HOH
HOH
207
A
HOH
72
6
HOH
HOH
208
A
HOH
71
6
HOH
HOH
209
A
HOH
32
6
HOH
HOH
210
A
HOH
154
6
HOH
HOH
211
A
HOH
165
6
HOH
HOH
212
A
HOH
13
6
HOH
HOH
213
A
HOH
112
6
HOH
HOH
214
A
HOH
60
6
HOH
HOH
215
A
HOH
9
6
HOH
HOH
216
A
HOH
8
6
HOH
HOH
217
A
HOH
70
6
HOH
HOH
218
A
HOH
20
6
HOH
HOH
219
A
HOH
4
6
HOH
HOH
220
A
HOH
49
6
HOH
HOH
221
A
HOH
65
6
HOH
HOH
222
A
HOH
28
6
HOH
HOH
223
A
HOH
2
6
HOH
HOH
224
A
HOH
23
6
HOH
HOH
225
A
HOH
140
6
HOH
HOH
226
A
HOH
44
6
HOH
HOH
227
A
HOH
6
6
HOH
HOH
228
A
HOH
116
6
HOH
HOH
229
A
HOH
81
6
HOH
HOH
230
A
HOH
85
6
HOH
HOH
231
A
HOH
30
6
HOH
HOH
232
A
HOH
10
6
HOH
HOH
233
A
HOH
106
6
HOH
HOH
234
A
HOH
7
6
HOH
HOH
235
A
HOH
27
6
HOH
HOH
236
A
HOH
11
6
HOH
HOH
237
A
HOH
31
6
HOH
HOH
238
A
HOH
37
6
HOH
HOH
239
A
HOH
230
6
HOH
HOH
240
A
HOH
132
6
HOH
HOH
241
A
HOH
186
6
HOH
HOH
242
A
HOH
125
6
HOH
HOH
243
A
HOH
48
6
HOH
HOH
244
A
HOH
88
6
HOH
HOH
245
A
HOH
61
6
HOH
HOH
246
A
HOH
73
6
HOH
HOH
247
A
HOH
83
6
HOH
HOH
248
A
HOH
21
6
HOH
HOH
249
A
HOH
14
6
HOH
HOH
250
A
HOH
43
6
HOH
HOH
251
A
HOH
142
6
HOH
HOH
252
A
HOH
24
6
HOH
HOH
253
A
HOH
89
6
HOH
HOH
254
A
HOH
222
6
HOH
HOH
255
A
HOH
225
6
HOH
HOH
256
A
HOH
77
6
HOH
HOH
257
A
HOH
66
6
HOH
HOH
258
A
HOH
55
6
HOH
HOH
259
A
HOH
41
6
HOH
HOH
260
A
HOH
135
6
HOH
HOH
261
A
HOH
15
6
HOH
HOH
262
A
HOH
3
6
HOH
HOH
263
A
HOH
115
6
HOH
HOH
264
A
HOH
5
6
HOH
HOH
265
A
HOH
68
6
HOH
HOH
266
A
HOH
16
6
HOH
HOH
267
A
HOH
45
6
HOH
HOH
268
A
HOH
229
6
HOH
HOH
269
A
HOH
34
6
HOH
HOH
270
A
HOH
126
6
HOH
HOH
271
A
HOH
35
6
HOH
HOH
272
A
HOH
19
6
HOH
HOH
273
A
HOH
12
6
HOH
HOH
274
A
HOH
92
6
HOH
HOH
275
A
HOH
56
6
HOH
HOH
276
A
HOH
18
6
HOH
HOH
277
A
HOH
22
6
HOH
HOH
278
A
HOH
38
6
HOH
HOH
279
A
HOH
52
6
HOH
HOH
280
A
HOH
1
6
HOH
HOH
281
A
HOH
124
6
HOH
HOH
282
A
HOH
93
6
HOH
HOH
283
A
HOH
168
6
HOH
HOH
284
A
HOH
179
6
HOH
HOH
285
A
HOH
144
6
HOH
HOH
286
A
HOH
62
6
HOH
HOH
287
A
HOH
156
6
HOH
HOH
288
A
HOH
25
6
HOH
HOH
289
A
HOH
51
6
HOH
HOH
290
A
HOH
141
6
HOH
HOH
291
A
HOH
155
6
HOH
HOH
292
A
HOH
224
6
HOH
HOH
293
A
HOH
90
6
HOH
HOH
294
A
HOH
29
6
HOH
HOH
295
A
HOH
96
6
HOH
HOH
296
A
HOH
128
6
HOH
HOH
297
A
HOH
184
6
HOH
HOH
298
A
HOH
147
6
HOH
HOH
299
A
HOH
64
6
HOH
HOH
300
A
HOH
76
6
HOH
HOH
301
A
HOH
143
6
HOH
HOH
302
A
HOH
79
6
HOH
HOH
303
A
HOH
80
6
HOH
HOH
304
A
HOH
171
6
HOH
HOH
305
A
HOH
82
6
HOH
HOH
306
A
HOH
170
6
HOH
HOH
307
A
HOH
110
6
HOH
HOH
308
A
HOH
87
6
HOH
HOH
309
A
HOH
46
6
HOH
HOH
310
A
HOH
54
6
HOH
HOH
311
A
HOH
114
6
HOH
HOH
312
A
HOH
63
6
HOH
HOH
313
A
HOH
101
6
HOH
HOH
314
A
HOH
111
6
HOH
HOH
315
A
HOH
151
6
HOH
HOH
316
A
HOH
58
6
HOH
HOH
317
A
HOH
152
6
HOH
HOH
318
A
HOH
193
6
HOH
HOH
319
A
HOH
98
6
HOH
HOH
320
A
HOH
94
6
HOH
HOH
321
A
HOH
166
6
HOH
HOH
322
A
HOH
36
6
HOH
HOH
323
A
HOH
109
6
HOH
HOH
324
A
HOH
97
6
HOH
HOH
325
A
HOH
163
6
HOH
HOH
326
A
HOH
50
6
HOH
HOH
327
A
HOH
127
6
HOH
HOH
328
A
HOH
118
6
HOH
HOH
329
A
HOH
103
6
HOH
HOH
330
A
HOH
157
6
HOH
HOH
331
A
HOH
121
6
HOH
HOH
332
A
HOH
47
6
HOH
HOH
333
A
HOH
183
6
HOH
HOH
334
A
HOH
59
6
HOH
HOH
335
A
HOH
95
6
HOH
HOH
336
A
HOH
17
6
HOH
HOH
337
A
HOH
40
6
HOH
HOH
338
A
HOH
123
6
HOH
HOH
339
A
HOH
53
6
HOH
HOH
340
A
HOH
74
6
HOH
HOH
341
A
HOH
33
6
HOH
HOH
342
A
HOH
122
6
HOH
HOH
343
A
HOH
107
6
HOH
HOH
344
A
HOH
173
6
HOH
HOH
345
A
HOH
131
6
HOH
HOH
346
A
HOH
150
6
HOH
HOH
347
A
HOH
161
6
HOH
HOH
348
A
HOH
102
6
HOH
HOH
349
A
HOH
42
6
HOH
HOH
350
A
HOH
160
6
HOH
HOH
351
A
HOH
149
6
HOH
HOH
352
A
HOH
84
6
HOH
HOH
353
A
HOH
178
6
HOH
HOH
354
A
HOH
218
6
HOH
HOH
355
A
HOH
136
6
HOH
HOH
356
A
HOH
119
6
HOH
HOH
357
A
HOH
145
6
HOH
HOH
358
A
HOH
117
6
HOH
HOH
359
A
HOH
130
6
HOH
HOH
360
A
HOH
213
6
HOH
HOH
361
A
HOH
57
6
HOH
HOH
362
A
HOH
195
6
HOH
HOH
363
A
HOH
176
6
HOH
HOH
364
A
HOH
174
6
HOH
HOH
365
A
HOH
146
6
HOH
HOH
366
A
HOH
169
6
HOH
HOH
367
A
HOH
134
6
HOH
HOH
368
A
HOH
138
6
HOH
HOH
369
A
HOH
162
6
HOH
HOH
370
A
HOH
69
6
HOH
HOH
371
A
HOH
194
6
HOH
HOH
372
A
HOH
148
6
HOH
HOH
373
A
HOH
175
6
HOH
HOH
374
A
HOH
196
6
HOH
HOH
375
A
HOH
86
6
HOH
HOH
376
A
HOH
219
6
HOH
HOH
377
A
HOH
137
6
HOH
HOH
378
A
HOH
104
6
HOH
HOH
379
A
HOH
158
6
HOH
HOH
380
A
HOH
99
6
HOH
HOH
381
A
HOH
139
6
HOH
HOH
382
A
HOH
153
6
HOH
HOH
383
A
HOH
159
6
HOH
HOH
384
A
MET
0
n
1
MET
0
A
ALA
1
n
2
ALA
1
A
LYS
2
n
3
LYS
2
A
TRP
3
n
4
TRP
3
A
VAL
4
n
5
VAL
4
A
CYS
5
n
6
CYS
5
A
LYS
6
n
7
LYS
6
A
ILE
7
n
8
ILE
7
A
CYS
8
n
9
CYS
8
A
GLY
9
n
10
GLY
9
A
TYR
10
n
11
TYR
10
A
ILE
11
n
12
ILE
11
A
TYR
12
n
13
TYR
12
A
ASP
13
n
14
ASP
13
A
GLU
14
n
15
GLU
14
A
ASP
15
n
16
ASP
15
A
ALA
16
n
17
ALA
16
A
GLY
17
n
18
GLY
17
A
ASP
18
n
19
ASP
18
A
PRO
19
n
20
PRO
19
A
ASP
20
n
21
ASP
20
A
ASN
21
n
22
ASN
21
A
GLY
22
n
23
GLY
22
A
ILE
23
n
24
ILE
23
A
SER
24
n
25
SER
24
A
PRO
25
n
26
PRO
25
A
GLY
26
n
27
GLY
26
A
THR
27
n
28
THR
27
A
LYS
28
n
29
LYS
28
A
PHE
29
n
30
PHE
29
A
GLU
30
n
31
GLU
30
A
GLU
31
n
32
GLU
31
A
LEU
32
n
33
LEU
32
A
PRO
33
n
34
PRO
33
A
ASP
34
n
35
ASP
34
A
ASP
35
n
36
ASP
35
A
TRP
36
n
37
TRP
36
A
VAL
37
n
38
VAL
37
A
CYS
38
n
39
CYS
38
A
PRO
39
n
40
PRO
39
A
ILE
40
n
41
ILE
40
A
CYS
41
n
42
CYS
41
A
GLY
42
n
43
GLY
42
A
ALA
43
n
44
ALA
43
A
PRO
44
n
45
PRO
44
A
LYS
45
n
46
LYS
45
A
SER
46
n
47
SER
46
A
GLU
47
n
48
GLU
47
A
PHE
48
n
49
PHE
48
A
GLU
49
n
50
GLU
49
A
LYS
50
n
51
LYS
50
A
LEU
51
n
52
LEU
51
A
GLU
52
n
53
GLU
52
A
ASP
53
n
54
ASP
53
A
software_defined_assembly
PISA
1
monomeric
none
410
-9
3540
A
CYS
5
A
SG
CYS
6
1_555
A
FE
101
B
FE
FE
1_555
A
CYS
8
A
SG
CYS
9
1_555
113.3
A
CYS
5
A
SG
CYS
6
1_555
A
FE
101
B
FE
FE
1_555
A
CYS
38
A
SG
CYS
39
1_555
112.1
A
CYS
8
A
SG
CYS
9
1_555
A
FE
101
B
FE
FE
1_555
A
CYS
38
A
SG
CYS
39
1_555
102.2
A
CYS
5
A
SG
CYS
6
1_555
A
FE
101
B
FE
FE
1_555
A
CYS
41
A
SG
CYS
42
1_555
103.5
A
CYS
8
A
SG
CYS
9
1_555
A
FE
101
B
FE
FE
1_555
A
CYS
41
A
SG
CYS
42
1_555
113.8
A
CYS
38
A
SG
CYS
39
1_555
A
FE
101
B
FE
FE
1_555
A
CYS
41
A
SG
CYS
42
1_555
112.2
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
315
F
O
HOH
1_555
155.0
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
309
F
O
HOH
1_555
87.7
A
HOH
315
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
309
F
O
HOH
1_555
67.8
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
251
F
O
HOH
1_555
80.1
A
HOH
315
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
251
F
O
HOH
1_555
111.2
A
HOH
309
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
251
F
O
HOH
1_555
130.2
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
292
F
O
HOH
1_555
139.4
A
HOH
315
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
292
F
O
HOH
1_555
61.6
A
HOH
309
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
292
F
O
HOH
1_555
127.3
A
HOH
251
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
292
F
O
HOH
1_555
62.0
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
285
F
O
HOH
1_555
85.1
A
HOH
315
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
285
F
O
HOH
1_555
117.7
A
HOH
309
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
285
F
O
HOH
1_555
144.1
A
HOH
251
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
285
F
O
HOH
1_555
83.0
A
HOH
292
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
285
F
O
HOH
1_555
76.8
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
88.5
A
HOH
315
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
92.6
A
HOH
309
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
81.0
A
HOH
251
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
145.7
A
HOH
292
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
114.2
A
HOH
285
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
63.7
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
87.4
A
HOH
315
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
77.1
A
HOH
309
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
62.8
A
HOH
251
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
68.5
A
HOH
292
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
91.5
A
HOH
285
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
151.4
A
HOH
307
F
O
HOH
1_555
A
NA
102
A
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
143.7
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
315
F
O
HOH
1_555
155.4
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
309
F
O
HOH
1_555
87.7
A
HOH
315
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
309
F
O
HOH
1_555
68.3
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
251
F
O
HOH
1_555
79.7
A
HOH
315
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
251
F
O
HOH
1_555
111.6
A
HOH
309
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
251
F
O
HOH
1_555
130.5
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
292
F
O
HOH
1_555
138.9
A
HOH
315
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
292
F
O
HOH
1_555
61.9
A
HOH
309
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
292
F
O
HOH
1_555
128.0
A
HOH
251
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
292
F
O
HOH
1_555
62.0
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
285
F
O
HOH
1_555
84.5
A
HOH
315
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
285
F
O
HOH
1_555
117.8
A
HOH
309
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
285
F
O
HOH
1_555
143.8
A
HOH
251
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
285
F
O
HOH
1_555
82.6
A
HOH
292
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
285
F
O
HOH
1_555
76.7
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
88.1
A
HOH
315
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
92.9
A
HOH
309
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
81.1
A
HOH
251
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
144.9
A
HOH
292
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
114.2
A
HOH
285
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
63.4
A
GLU
30
A
O
GLU
31
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
87.3
A
HOH
315
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
77.5
A
HOH
309
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
63.1
A
HOH
251
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
68.6
A
HOH
292
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
91.9
A
HOH
285
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
151.0
A
HOH
307
F
O
HOH
1_555
A
K
103
B
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
144.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
12
A
O
TYR
13
A
N
TRP
3
A
N
TRP
4
A
N
VAL
4
A
N
VAL
5
A
O
GLU
49
A
O
GLU
50
1
A
A
O
O
ASP
HOH
53
201
1.93
B
1
A
A
OD2
O
ASP
HOH
53
202
2.18
B
1
A
A
C
N
GLU
ASP
52
53
2.60
B
1
A
ASP
18
-155.19
65.82
1
A
ASP
18
-155.19
62.92
0.1458
0.1345
0.1351
0.59
21.535
5830
115859
5.03
85.56
0.03
1
FREE R-VALUE
1.34
14.23
0.90
1.11
0.59
21.535
184
613
8
0
421
0.006
463
0.990
634
12.409
174
0.084
61
0.009
87
0.1937
0.3088
0.5917
16
244
6.00
0.2538
0.2627
0.5987
43
919
22.00
0.2835
0.2608
0.6060
73
1472
35.00
0.2333
0.2376
0.6137
102
2060
48.00
0.2090
0.2201
0.6217
131
2469
58.00
0.2265
0.2096
0.6303
156
2789
66.00
0.2034
0.2104
0.6393
185
3118
74.00
0.1891
0.1897
0.6488
179
3447
81.00
0.1703
0.1839
0.6590
194
3672
86.00
0.1671
0.1692
0.6698
215
3923
93.00
0.1694
0.1603
0.6813
224
4230
99.00
0.1531
0.1561
0.6937
221
4218
99.00
0.1684
0.1517
0.7070
226
4257
100.00
0.1465
0.1492
0.7215
238
4206
100.00
0.1498
0.1466
0.7372
240
4235
100.00
0.1326
0.1416
0.7543
210
4282
100.00
0.1474
0.1411
0.7732
221
4232
100.00
0.1638
0.1421
0.7941
229
4286
100.00
0.1510
0.1392
0.8174
212
4300
100.00
0.1291
0.1401
0.8438
231
4268
100.00
0.1296
0.1316
0.8740
225
4274
100.00
0.1403
0.1248
0.9090
189
4350
100.00
0.1322
0.1222
0.9504
221
4265
100.00
0.1111
0.1207
1.0005
205
4321
100.00
0.1139
0.1169
1.0631
248
4280
100.00
0.1086
0.1129
1.1452
226
4337
100.00
0.1300
0.1160
1.2605
242
4318
100.00
0.1352
0.1232
1.4428
234
4330
99.00
0.1546
0.1266
1.8177
238
4388
100.00
0.1613
0.1336
21.5501
256
4539
99.00
0.59
43.07
5NW3
115950
0.999
0.042
0.02
0.051
1
17.7
5.5
85.6
0.427
0.59
0.60
2.1
5865
0.563
0.369
0.578
1
2.2
30.3
refinement
PHENIX
(1.10_2142: ???)
data reduction
XDS
data scaling
SCALA
phasing
ACORN
N
Rubredoxin
The cryofrozen atomic resolution X-ray crystal structure of perdeuterated Pyrococcus furiosus Rubredoxin (100K, 0.59A resolution)
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
ASP
18
A
ASP
19
HELX_P
A
GLY
22
A
GLY
23
5
AA1
5
A
LYS
28
A
LYS
29
HELX_P
A
LEU
32
A
LEU
33
5
AA2
5
A
PRO
44
A
PRO
45
HELX_P
A
SER
46
A
SER
47
5
AA3
3
metalc
2.302
A
CYS
5
A
SG
CYS
6
1_555
A
FE
101
B
FE
FE
1_555
metalc
2.270
A
CYS
8
A
SG
CYS
9
1_555
A
FE
101
B
FE
FE
1_555
metalc
2.633
A
A
GLU
30
A
O
GLU
31
1_555
A
NA
102
C
NA
NA
1_555
metalc
2.648
B
A
GLU
30
A
O
GLU
31
1_555
A
K
103
D
K
K
1_555
metalc
2.319
A
CYS
38
A
SG
CYS
39
1_555
A
FE
101
B
FE
FE
1_555
metalc
2.284
A
CYS
41
A
SG
CYS
42
1_555
A
FE
101
B
FE
FE
1_555
metalc
2.892
A
A
NA
102
C
NA
NA
1_555
A
HOH
315
F
O
HOH
1_555
metalc
2.992
A
A
NA
102
C
NA
NA
1_555
A
HOH
309
F
O
HOH
1_555
metalc
2.861
A
A
NA
102
C
NA
NA
1_555
A
HOH
251
F
O
HOH
1_555
metalc
2.947
A
A
NA
102
C
NA
NA
1_555
A
HOH
292
F
O
HOH
1_555
metalc
2.791
A
A
NA
102
C
NA
NA
1_555
A
HOH
285
F
O
HOH
1_555
metalc
2.819
A
A
NA
102
C
NA
NA
1_555
A
HOH
307
F
O
HOH
1_555
metalc
3.197
A
A
NA
102
C
NA
NA
1_555
A
HOH
246
F
O
HOH
1_555
metalc
2.872
B
A
K
103
D
K
K
1_555
A
HOH
315
F
O
HOH
1_555
metalc
2.980
B
A
K
103
D
K
K
1_555
A
HOH
309
F
O
HOH
1_555
metalc
2.867
B
A
K
103
D
K
K
1_555
A
HOH
251
F
O
HOH
1_555
metalc
2.941
B
A
K
103
D
K
K
1_555
A
HOH
292
F
O
HOH
1_555
metalc
2.807
B
A
K
103
D
K
K
1_555
A
HOH
285
F
O
HOH
1_555
metalc
2.824
B
A
K
103
D
K
K
1_555
A
HOH
307
F
O
HOH
1_555
metalc
3.185
B
A
K
103
D
K
K
1_555
A
HOH
246
F
O
HOH
1_555
ELECTRON TRANSPORT
Perdeuterated rubredoxin, pyrococcus furiosus, atomic resolution, ELECTRON TRANSPORT
RUBR_PYRFU
UNP
1
1
P24297
MAKWVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLED
1
54
5NW3
0
53
P24297
A
1
1
54
3
anti-parallel
anti-parallel
A
ILE
11
A
ILE
12
A
ASP
13
A
ASP
14
A
LYS
2
A
LYS
3
A
CYS
5
A
CYS
6
A
PHE
48
A
PHE
49
A
LYS
50
A
LYS
51
binding site for residue FE A 101
A
FE
101
Software
4
binding site for residue NA A 102
A
NA
102
Software
7
binding site for residue K A 103
A
K
103
Software
7
binding site for residue PO4 A 104
A
PO4
104
Software
9
A
CYS
5
A
CYS
6
4
1_555
A
CYS
8
A
CYS
9
4
1_555
A
CYS
38
A
CYS
39
4
1_555
A
CYS
41
A
CYS
42
4
1_555
A
GLU
30
A
GLU
31
7
1_555
A
HOH
251
F
HOH
7
1_555
A
HOH
285
F
HOH
7
1_555
A
HOH
292
F
HOH
7
1_555
A
HOH
307
F
HOH
7
1_555
A
HOH
309
F
HOH
7
1_555
A
HOH
315
F
HOH
7
1_555
A
GLU
30
A
GLU
31
7
1_555
A
HOH
251
F
HOH
7
1_555
A
HOH
285
F
HOH
7
1_555
A
HOH
292
F
HOH
7
1_555
A
HOH
307
F
HOH
7
1_555
A
HOH
309
F
HOH
7
1_555
A
HOH
315
F
HOH
7
1_555
A
MET
0
A
MET
1
9
3_655
A
ASP
15
A
ASP
16
9
3_655
A
PRO
39
A
PRO
40
9
1_555
A
ASP
53
A
ASP
54
9
4_455
A
HOH
206
F
HOH
9
1_555
A
HOH
214
F
HOH
9
1_555
A
HOH
224
F
HOH
9
4_455
A
HOH
226
F
HOH
9
1_555
A
HOH
234
F
HOH
9
1_555
19
P 21 21 21