0.027999
0.000000
0.000000
0.000000
0.014291
0.000000
0.000000
0.000000
0.009112
0.00000
0.00000
0.00000
0000-0002-9848-2276
Gabrielsen, M.
Buetow, L.
Huang, D.T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
35.715
69.972
109.747
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
US
Mol. Cell
MOCEFL
2168
1097-4164
68
456
470.e10
10.1016/j.molcel.2017.09.027
29053960
A General Strategy for Discovery of Inhibitors and Activators of RING and U-box E3 Ligases with Ubiquitin Variants.
2017
10.2210/pdb5o6t/pdb
pdb_00005o6t
110
1
PIXEL
2016-04-28
DECTRIS PILATUS 6M-F
SINGLE WAVELENGTH
M
x-ray
1
0.9795
1.0
I04
Diamond
0.9795
SYNCHROTRON
DIAMOND BEAMLINE I04
7569.029
E3 ubiquitin-protein ligase XIAP
2.3.2.27
2
man
polymer
A variant of ubiquitin identified from a phage-display library
9041.301
Polyubiquitin-B
2
man
polymer
65.409
ZINC ION
4
syn
non-polymer
62.068
1,2-ETHANEDIOL
2
syn
non-polymer
18.015
water
218
nat
water
Baculoviral IAP repeat-containing protein 4,IAP-like protein,hILP,Inhibitor of apoptosis protein 3,hIAP3,RING-type E3 ubiquitin transferase XIAP,X-linked inhibitor of apoptosis protein,X-linked IAP
no
no
GSEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
GSEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
A,B
polypeptide(L)
no
no
GSMQILVTTISAETIRLEVEPSDTIENVKAKIQDKEGIPPDQQRLFFEGKQLEDGRTLSDYNINKKSTLLLVVKFHRVAS
GSMQILVTTISAETIRLEVEPSDTIENVKAKIQDKEGIPPDQQRLFFEGKQLEDGRTLSDYNINKKSTLLLVVKFHRVAS
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
66
XIAP, API3, BIRC4, IAP3
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
Plasmid
Biological sequence
pGEX4T.1
Human
sample
1
80
UBB
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
Biological sequence
1
2.06
40.41
Rectangular cuboids
VAPOR DIFFUSION, SITTING DROP
7.6
0.1 M NaHEPES pH 7.5, 1.4 M tri-Na citrate
291
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_unobs_or_zero_occ_atoms
repository
Initial release
Advisory
Data collection
Database references
Refinement description
1
0
2017-11-01
1
1
2024-01-17
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United Kingdom
Cancer Research UK
C596/A23278
United Kingdom
European Research Council
647849
N
PDBE
Y
PDBE
2017-06-07
REL
REL
ZN
ZINC ION
EDO
1,2-ETHANEDIOL
HOH
water
3EB5
3EB5, 1UBQ
PDB
experimental model
1UBQ
3EB5, 1UBQ
PDB
experimental model
ZN
1001
3
ZN
ZN
1001
A
ZN
1003
3
ZN
ZN
1002
A
EDO
1
4
EDO
EDO
1003
A
ZN
894
3
ZN
ZN
501
B
ZN
895
3
ZN
ZN
502
B
EDO
2
4
EDO
EDO
503
B
HOH
25
5
HOH
HOH
1101
A
HOH
78
5
HOH
HOH
1102
A
HOH
15
5
HOH
HOH
1103
A
HOH
14
5
HOH
HOH
1104
A
HOH
22
5
HOH
HOH
1105
A
HOH
73
5
HOH
HOH
1106
A
HOH
59
5
HOH
HOH
1107
A
HOH
37
5
HOH
HOH
1108
A
HOH
57
5
HOH
HOH
1109
A
HOH
6
5
HOH
HOH
1110
A
HOH
41
5
HOH
HOH
1111
A
HOH
33
5
HOH
HOH
1112
A
HOH
8
5
HOH
HOH
1113
A
HOH
186
5
HOH
HOH
1114
A
HOH
1
5
HOH
HOH
1115
A
HOH
32
5
HOH
HOH
1116
A
HOH
76
5
HOH
HOH
1117
A
HOH
17
5
HOH
HOH
1118
A
HOH
21
5
HOH
HOH
1119
A
HOH
79
5
HOH
HOH
1120
A
HOH
36
5
HOH
HOH
1121
A
HOH
99
5
HOH
HOH
1122
A
HOH
24
5
HOH
HOH
1123
A
HOH
18
5
HOH
HOH
1124
A
HOH
64
5
HOH
HOH
1125
A
HOH
28
5
HOH
HOH
1126
A
HOH
40
5
HOH
HOH
1127
A
HOH
235
5
HOH
HOH
1128
A
HOH
16
5
HOH
HOH
1129
A
HOH
101
5
HOH
HOH
1130
A
HOH
30
5
HOH
HOH
1131
A
HOH
9
5
HOH
HOH
1132
A
HOH
13
5
HOH
HOH
1133
A
HOH
27
5
HOH
HOH
1134
A
HOH
20
5
HOH
HOH
1135
A
HOH
7
5
HOH
HOH
1136
A
HOH
69
5
HOH
HOH
1137
A
HOH
4
5
HOH
HOH
1138
A
HOH
26
5
HOH
HOH
1139
A
HOH
234
5
HOH
HOH
1140
A
HOH
68
5
HOH
HOH
1141
A
HOH
199
5
HOH
HOH
1142
A
HOH
194
5
HOH
HOH
1143
A
HOH
223
5
HOH
HOH
1144
A
HOH
226
5
HOH
HOH
1145
A
HOH
243
5
HOH
HOH
1146
A
HOH
81
5
HOH
HOH
1147
A
HOH
221
5
HOH
HOH
1148
A
HOH
256
5
HOH
HOH
1149
A
HOH
224
5
HOH
HOH
1150
A
HOH
48
5
HOH
HOH
1151
A
HOH
210
5
HOH
HOH
1152
A
HOH
197
5
HOH
HOH
1153
A
HOH
272
5
HOH
HOH
1154
A
HOH
258
5
HOH
HOH
1155
A
HOH
74
5
HOH
HOH
1156
A
HOH
65
5
HOH
HOH
1157
A
HOH
115
5
HOH
HOH
601
B
HOH
119
5
HOH
HOH
602
B
HOH
216
5
HOH
HOH
603
B
HOH
148
5
HOH
HOH
604
B
HOH
100
5
HOH
HOH
605
B
HOH
113
5
HOH
HOH
606
B
HOH
236
5
HOH
HOH
607
B
HOH
106
5
HOH
HOH
608
B
HOH
46
5
HOH
HOH
609
B
HOH
75
5
HOH
HOH
610
B
HOH
109
5
HOH
HOH
611
B
HOH
63
5
HOH
HOH
612
B
HOH
255
5
HOH
HOH
613
B
HOH
49
5
HOH
HOH
614
B
HOH
42
5
HOH
HOH
615
B
HOH
105
5
HOH
HOH
616
B
HOH
244
5
HOH
HOH
617
B
HOH
3
5
HOH
HOH
618
B
HOH
98
5
HOH
HOH
619
B
HOH
103
5
HOH
HOH
620
B
HOH
114
5
HOH
HOH
621
B
HOH
72
5
HOH
HOH
622
B
HOH
95
5
HOH
HOH
623
B
HOH
94
5
HOH
HOH
624
B
HOH
108
5
HOH
HOH
625
B
HOH
107
5
HOH
HOH
626
B
HOH
116
5
HOH
HOH
627
B
HOH
117
5
HOH
HOH
628
B
HOH
118
5
HOH
HOH
629
B
HOH
102
5
HOH
HOH
630
B
HOH
209
5
HOH
HOH
631
B
HOH
233
5
HOH
HOH
632
B
HOH
111
5
HOH
HOH
633
B
HOH
93
5
HOH
HOH
634
B
HOH
96
5
HOH
HOH
635
B
HOH
104
5
HOH
HOH
636
B
HOH
229
5
HOH
HOH
637
B
HOH
238
5
HOH
HOH
638
B
HOH
47
5
HOH
HOH
639
B
HOH
44
5
HOH
HOH
640
B
HOH
207
5
HOH
HOH
641
B
HOH
242
5
HOH
HOH
642
B
HOH
220
5
HOH
HOH
643
B
HOH
203
5
HOH
HOH
644
B
HOH
228
5
HOH
HOH
645
B
HOH
218
5
HOH
HOH
646
B
HOH
34
5
HOH
HOH
647
B
HOH
205
5
HOH
HOH
648
B
HOH
245
5
HOH
HOH
649
B
HOH
196
5
HOH
HOH
650
B
HOH
135
5
HOH
HOH
101
C
HOH
123
5
HOH
HOH
102
C
HOH
139
5
HOH
HOH
103
C
HOH
52
5
HOH
HOH
104
C
HOH
144
5
HOH
HOH
105
C
HOH
127
5
HOH
HOH
106
C
HOH
136
5
HOH
HOH
107
C
HOH
137
5
HOH
HOH
108
C
HOH
161
5
HOH
HOH
109
C
HOH
269
5
HOH
HOH
110
C
HOH
121
5
HOH
HOH
111
C
HOH
147
5
HOH
HOH
112
C
HOH
145
5
HOH
HOH
113
C
HOH
195
5
HOH
HOH
114
C
HOH
142
5
HOH
HOH
115
C
HOH
84
5
HOH
HOH
116
C
HOH
270
5
HOH
HOH
117
C
HOH
140
5
HOH
HOH
118
C
HOH
138
5
HOH
HOH
119
C
HOH
83
5
HOH
HOH
120
C
HOH
247
5
HOH
HOH
121
C
HOH
131
5
HOH
HOH
122
C
HOH
120
5
HOH
HOH
123
C
HOH
67
5
HOH
HOH
124
C
HOH
143
5
HOH
HOH
125
C
HOH
130
5
HOH
HOH
126
C
HOH
125
5
HOH
HOH
127
C
HOH
262
5
HOH
HOH
128
C
HOH
51
5
HOH
HOH
129
C
HOH
133
5
HOH
HOH
130
C
HOH
230
5
HOH
HOH
131
C
HOH
126
5
HOH
HOH
132
C
HOH
132
5
HOH
HOH
133
C
HOH
85
5
HOH
HOH
134
C
HOH
134
5
HOH
HOH
135
C
HOH
86
5
HOH
HOH
136
C
HOH
249
5
HOH
HOH
137
C
HOH
56
5
HOH
HOH
138
C
HOH
201
5
HOH
HOH
139
C
HOH
231
5
HOH
HOH
140
C
HOH
212
5
HOH
HOH
141
C
HOH
222
5
HOH
HOH
142
C
HOH
164
5
HOH
HOH
143
C
HOH
39
5
HOH
HOH
144
C
HOH
259
5
HOH
HOH
145
C
HOH
267
5
HOH
HOH
146
C
HOH
82
5
HOH
HOH
147
C
HOH
268
5
HOH
HOH
148
C
HOH
241
5
HOH
HOH
149
C
HOH
58
5
HOH
HOH
150
C
HOH
77
5
HOH
HOH
101
D
HOH
70
5
HOH
HOH
102
D
HOH
160
5
HOH
HOH
103
D
HOH
172
5
HOH
HOH
104
D
HOH
91
5
HOH
HOH
105
D
HOH
260
5
HOH
HOH
106
D
HOH
181
5
HOH
HOH
107
D
HOH
187
5
HOH
HOH
108
D
HOH
168
5
HOH
HOH
109
D
HOH
124
5
HOH
HOH
110
D
HOH
171
5
HOH
HOH
111
D
HOH
253
5
HOH
HOH
112
D
HOH
155
5
HOH
HOH
113
D
HOH
165
5
HOH
HOH
114
D
HOH
158
5
HOH
HOH
115
D
HOH
179
5
HOH
HOH
116
D
HOH
170
5
HOH
HOH
117
D
HOH
271
5
HOH
HOH
118
D
HOH
237
5
HOH
HOH
119
D
HOH
162
5
HOH
HOH
120
D
HOH
252
5
HOH
HOH
121
D
HOH
184
5
HOH
HOH
122
D
HOH
149
5
HOH
HOH
123
D
HOH
174
5
HOH
HOH
124
D
HOH
173
5
HOH
HOH
125
D
HOH
154
5
HOH
HOH
126
D
HOH
54
5
HOH
HOH
127
D
HOH
87
5
HOH
HOH
128
D
HOH
189
5
HOH
HOH
129
D
HOH
175
5
HOH
HOH
130
D
HOH
188
5
HOH
HOH
131
D
HOH
152
5
HOH
HOH
132
D
HOH
166
5
HOH
HOH
133
D
HOH
190
5
HOH
HOH
134
D
HOH
183
5
HOH
HOH
135
D
HOH
178
5
HOH
HOH
136
D
HOH
177
5
HOH
HOH
137
D
HOH
151
5
HOH
HOH
138
D
HOH
185
5
HOH
HOH
139
D
HOH
257
5
HOH
HOH
140
D
HOH
159
5
HOH
HOH
141
D
HOH
176
5
HOH
HOH
142
D
HOH
150
5
HOH
HOH
143
D
HOH
50
5
HOH
HOH
144
D
HOH
153
5
HOH
HOH
145
D
HOH
246
5
HOH
HOH
146
D
HOH
214
5
HOH
HOH
147
D
HOH
90
5
HOH
HOH
148
D
HOH
232
5
HOH
HOH
149
D
HOH
88
5
HOH
HOH
150
D
HOH
157
5
HOH
HOH
151
D
HOH
273
5
HOH
HOH
152
D
HOH
208
5
HOH
HOH
153
D
HOH
215
5
HOH
HOH
154
D
HOH
239
5
HOH
HOH
155
D
HOH
66
5
HOH
HOH
156
D
HOH
23
5
HOH
HOH
157
D
HOH
217
5
HOH
HOH
158
D
HOH
62
5
HOH
HOH
159
D
HOH
71
5
HOH
HOH
160
D
HOH
261
5
HOH
HOH
161
D
n
1
432
A
n
2
433
A
GLU
434
n
3
GLU
434
A
ILE
435
n
4
ILE
435
A
SER
436
n
5
SER
436
A
THR
437
n
6
THR
437
A
GLU
438
n
7
GLU
438
A
GLU
439
n
8
GLU
439
A
GLN
440
n
9
GLN
440
A
LEU
441
n
10
LEU
441
A
ARG
442
n
11
ARG
442
A
ARG
443
n
12
ARG
443
A
LEU
444
n
13
LEU
444
A
GLN
445
n
14
GLN
445
A
GLU
446
n
15
GLU
446
A
GLU
447
n
16
GLU
447
A
LYS
448
n
17
LYS
448
A
LEU
449
n
18
LEU
449
A
CYS
450
n
19
CYS
450
A
LYS
451
n
20
LYS
451
A
ILE
452
n
21
ILE
452
A
CYS
453
n
22
CYS
453
A
MET
454
n
23
MET
454
A
ASP
455
n
24
ASP
455
A
ARG
456
n
25
ARG
456
A
ASN
457
n
26
ASN
457
A
ILE
458
n
27
ILE
458
A
ALA
459
n
28
ALA
459
A
ILE
460
n
29
ILE
460
A
VAL
461
n
30
VAL
461
A
PHE
462
n
31
PHE
462
A
VAL
463
n
32
VAL
463
A
PRO
464
n
33
PRO
464
A
CYS
465
n
34
CYS
465
A
GLY
466
n
35
GLY
466
A
HIS
467
n
36
HIS
467
A
LEU
468
n
37
LEU
468
A
VAL
469
n
38
VAL
469
A
THR
470
n
39
THR
470
A
CYS
471
n
40
CYS
471
A
LYS
472
n
41
LYS
472
A
GLN
473
n
42
GLN
473
A
CYS
474
n
43
CYS
474
A
ALA
475
n
44
ALA
475
A
GLU
476
n
45
GLU
476
A
ALA
477
n
46
ALA
477
A
VAL
478
n
47
VAL
478
A
ASP
479
n
48
ASP
479
A
LYS
480
n
49
LYS
480
A
CYS
481
n
50
CYS
481
A
PRO
482
n
51
PRO
482
A
MET
483
n
52
MET
483
A
CYS
484
n
53
CYS
484
A
TYR
485
n
54
TYR
485
A
THR
486
n
55
THR
486
A
VAL
487
n
56
VAL
487
A
ILE
488
n
57
ILE
488
A
THR
489
n
58
THR
489
A
PHE
490
n
59
PHE
490
A
LYS
491
n
60
LYS
491
A
GLN
492
n
61
GLN
492
A
LYS
493
n
62
LYS
493
A
ILE
494
n
63
ILE
494
A
PHE
495
n
64
PHE
495
A
MET
496
n
65
MET
496
A
SER
497
n
66
SER
497
A
n
1
432
B
n
2
433
B
n
3
434
B
ILE
435
n
4
ILE
435
B
SER
436
n
5
SER
436
B
THR
437
n
6
THR
437
B
GLU
438
n
7
GLU
438
B
GLU
439
n
8
GLU
439
B
GLN
440
n
9
GLN
440
B
LEU
441
n
10
LEU
441
B
ARG
442
n
11
ARG
442
B
ARG
443
n
12
ARG
443
B
LEU
444
n
13
LEU
444
B
GLN
445
n
14
GLN
445
B
GLU
446
n
15
GLU
446
B
GLU
447
n
16
GLU
447
B
LYS
448
n
17
LYS
448
B
LEU
449
n
18
LEU
449
B
CYS
450
n
19
CYS
450
B
LYS
451
n
20
LYS
451
B
ILE
452
n
21
ILE
452
B
CYS
453
n
22
CYS
453
B
MET
454
n
23
MET
454
B
ASP
455
n
24
ASP
455
B
ARG
456
n
25
ARG
456
B
ASN
457
n
26
ASN
457
B
ILE
458
n
27
ILE
458
B
ALA
459
n
28
ALA
459
B
ILE
460
n
29
ILE
460
B
VAL
461
n
30
VAL
461
B
PHE
462
n
31
PHE
462
B
VAL
463
n
32
VAL
463
B
PRO
464
n
33
PRO
464
B
CYS
465
n
34
CYS
465
B
GLY
466
n
35
GLY
466
B
HIS
467
n
36
HIS
467
B
LEU
468
n
37
LEU
468
B
VAL
469
n
38
VAL
469
B
THR
470
n
39
THR
470
B
CYS
471
n
40
CYS
471
B
LYS
472
n
41
LYS
472
B
GLN
473
n
42
GLN
473
B
CYS
474
n
43
CYS
474
B
ALA
475
n
44
ALA
475
B
GLU
476
n
45
GLU
476
B
ALA
477
n
46
ALA
477
B
VAL
478
n
47
VAL
478
B
ASP
479
n
48
ASP
479
B
LYS
480
n
49
LYS
480
B
CYS
481
n
50
CYS
481
B
PRO
482
n
51
PRO
482
B
MET
483
n
52
MET
483
B
CYS
484
n
53
CYS
484
B
TYR
485
n
54
TYR
485
B
THR
486
n
55
THR
486
B
VAL
487
n
56
VAL
487
B
ILE
488
n
57
ILE
488
B
THR
489
n
58
THR
489
B
PHE
490
n
59
PHE
490
B
LYS
491
n
60
LYS
491
B
GLN
492
n
61
GLN
492
B
LYS
493
n
62
LYS
493
B
ILE
494
n
63
ILE
494
B
PHE
495
n
64
PHE
495
B
MET
496
n
65
MET
496
B
SER
497
n
66
SER
497
B
n
1
-1
C
SER
0
n
2
SER
0
C
MET
1
n
3
MET
1
C
GLN
2
n
4
GLN
2
C
ILE
3
n
5
ILE
3
C
LEU
4
n
6
LEU
4
C
VAL
5
n
7
VAL
5
C
THR
6
n
8
THR
6
C
THR
7
n
9
THR
7
C
ILE
8
n
10
ILE
8
C
SER
9
n
11
SER
9
C
ALA
10
n
12
ALA
10
C
GLU
11
n
13
GLU
11
C
THR
12
n
14
THR
12
C
ILE
13
n
15
ILE
13
C
ARG
14
n
16
ARG
14
C
LEU
15
n
17
LEU
15
C
GLU
16
n
18
GLU
16
C
VAL
17
n
19
VAL
17
C
GLU
18
n
20
GLU
18
C
PRO
19
n
21
PRO
19
C
SER
20
n
22
SER
20
C
ASP
21
n
23
ASP
21
C
THR
22
n
24
THR
22
C
ILE
23
n
25
ILE
23
C
GLU
24
n
26
GLU
24
C
ASN
25
n
27
ASN
25
C
VAL
26
n
28
VAL
26
C
LYS
27
n
29
LYS
27
C
ALA
28
n
30
ALA
28
C
LYS
29
n
31
LYS
29
C
ILE
30
n
32
ILE
30
C
GLN
31
n
33
GLN
31
C
ASP
32
n
34
ASP
32
C
LYS
33
n
35
LYS
33
C
GLU
34
n
36
GLU
34
C
GLY
35
n
37
GLY
35
C
ILE
36
n
38
ILE
36
C
PRO
37
n
39
PRO
37
C
PRO
38
n
40
PRO
38
C
ASP
39
n
41
ASP
39
C
GLN
40
n
42
GLN
40
C
GLN
41
n
43
GLN
41
C
ARG
42
n
44
ARG
42
C
LEU
43
n
45
LEU
43
C
PHE
44
n
46
PHE
44
C
PHE
45
n
47
PHE
45
C
GLU
46
n
48
GLU
46
C
GLY
47
n
49
GLY
47
C
LYS
48
n
50
LYS
48
C
GLN
49
n
51
GLN
49
C
LEU
50
n
52
LEU
50
C
GLU
51
n
53
GLU
51
C
ASP
52
n
54
ASP
52
C
GLY
53
n
55
GLY
53
C
ARG
54
n
56
ARG
54
C
THR
55
n
57
THR
55
C
LEU
56
n
58
LEU
56
C
SER
57
n
59
SER
57
C
ASP
58
n
60
ASP
58
C
TYR
59
n
61
TYR
59
C
ASN
60
n
62
ASN
60
C
ILE
61
n
63
ILE
61
C
ASN
62
n
64
ASN
62
C
LYS
63
n
65
LYS
63
C
LYS
64
n
66
LYS
64
C
SER
65
n
67
SER
65
C
THR
66
n
68
THR
66
C
LEU
67
n
69
LEU
67
C
LEU
68
n
70
LEU
68
C
LEU
69
n
71
LEU
69
C
VAL
70
n
72
VAL
70
C
VAL
71
n
73
VAL
71
C
LYS
72
n
74
LYS
72
C
PHE
73
n
75
PHE
73
C
HIS
74
n
76
HIS
74
C
n
77
75
C
n
78
76
C
n
79
77
C
n
80
78
C
n
1
-1
D
SER
0
n
2
SER
0
D
MET
1
n
3
MET
1
D
GLN
2
n
4
GLN
2
D
ILE
3
n
5
ILE
3
D
LEU
4
n
6
LEU
4
D
VAL
5
n
7
VAL
5
D
THR
6
n
8
THR
6
D
THR
7
n
9
THR
7
D
ILE
8
n
10
ILE
8
D
SER
9
n
11
SER
9
D
ALA
10
n
12
ALA
10
D
GLU
11
n
13
GLU
11
D
THR
12
n
14
THR
12
D
ILE
13
n
15
ILE
13
D
ARG
14
n
16
ARG
14
D
LEU
15
n
17
LEU
15
D
GLU
16
n
18
GLU
16
D
VAL
17
n
19
VAL
17
D
GLU
18
n
20
GLU
18
D
PRO
19
n
21
PRO
19
D
SER
20
n
22
SER
20
D
ASP
21
n
23
ASP
21
D
THR
22
n
24
THR
22
D
ILE
23
n
25
ILE
23
D
GLU
24
n
26
GLU
24
D
ASN
25
n
27
ASN
25
D
VAL
26
n
28
VAL
26
D
LYS
27
n
29
LYS
27
D
ALA
28
n
30
ALA
28
D
LYS
29
n
31
LYS
29
D
ILE
30
n
32
ILE
30
D
GLN
31
n
33
GLN
31
D
ASP
32
n
34
ASP
32
D
LYS
33
n
35
LYS
33
D
GLU
34
n
36
GLU
34
D
GLY
35
n
37
GLY
35
D
ILE
36
n
38
ILE
36
D
PRO
37
n
39
PRO
37
D
PRO
38
n
40
PRO
38
D
ASP
39
n
41
ASP
39
D
GLN
40
n
42
GLN
40
D
GLN
41
n
43
GLN
41
D
ARG
42
n
44
ARG
42
D
LEU
43
n
45
LEU
43
D
PHE
44
n
46
PHE
44
D
PHE
45
n
47
PHE
45
D
GLU
46
n
48
GLU
46
D
GLY
47
n
49
GLY
47
D
LYS
48
n
50
LYS
48
D
GLN
49
n
51
GLN
49
D
LEU
50
n
52
LEU
50
D
GLU
51
n
53
GLU
51
D
ASP
52
n
54
ASP
52
D
GLY
53
n
55
GLY
53
D
ARG
54
n
56
ARG
54
D
THR
55
n
57
THR
55
D
LEU
56
n
58
LEU
56
D
SER
57
n
59
SER
57
D
ASP
58
n
60
ASP
58
D
TYR
59
n
61
TYR
59
D
ASN
60
n
62
ASN
60
D
ILE
61
n
63
ILE
61
D
ASN
62
n
64
ASN
62
D
LYS
63
n
65
LYS
63
D
LYS
64
n
66
LYS
64
D
SER
65
n
67
SER
65
D
THR
66
n
68
THR
66
D
LEU
67
n
69
LEU
67
D
LEU
68
n
70
LEU
68
D
LEU
69
n
71
LEU
69
D
VAL
70
n
72
VAL
70
D
VAL
71
n
73
VAL
71
D
LYS
72
n
74
LYS
72
D
PHE
73
n
75
PHE
73
D
n
76
74
D
n
77
75
D
n
78
76
D
n
79
77
D
n
80
78
D
0.9017
0.0880
0.0563
1.1052
0.5769
0.9425
-0.0425
0.0950
0.0744
-0.1181
0.0491
-0.0792
-0.1426
0.0768
-0.0067
-0.0372
-0.0136
0.0049
-0.0007
0.0068
-0.0028
refined
43.3685
18.1291
131.4830
X-RAY DIFFRACTION
0.6947
0.1283
0.2734
1.0310
-0.6729
1.1972
-0.0373
0.0631
-0.0657
-0.1374
0.0332
0.0469
0.1014
-0.0666
0.0041
-0.0352
-0.0022
-0.0086
-0.0007
-0.0015
-0.0070
refined
28.3918
18.7913
131.2630
X-RAY DIFFRACTION
1.4276
-2.3742
0.0047
6.0668
0.0332
0.6984
-0.0648
-0.1336
-0.0356
0.2844
0.1946
0.0706
-0.0471
-0.0317
-0.1297
-0.0311
0.0147
0.0312
-0.0407
0.0090
-0.0383
refined
33.9463
29.0331
153.2130
X-RAY DIFFRACTION
0.6619
-0.8814
-0.0137
4.1116
-0.2826
0.5930
0.0152
-0.0175
0.0330
0.2737
0.0330
0.0092
0.0726
-0.0084
-0.0482
-0.0161
0.0089
-0.0270
-0.0322
-0.0025
-0.0404
refined
36.2999
7.7328
153.3310
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
{ A|* }
X-RAY DIFFRACTION
2
{ B|* }
X-RAY DIFFRACTION
3
{ C|* }
X-RAY DIFFRACTION
4
{ D|* }
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
This RING ligase works as a dimer, and has been well established in literature.
gel filtration
This dimerisation is necessary for the binding and the stimulation effect
gel filtration
2310
-11
7610
3730
-25
8590
A
CYS
450
A
SG
CYS
19
1_555
A
ZN
1001
E
ZN
ZN
1_555
A
CYS
453
A
SG
CYS
22
1_555
107.9
A
CYS
450
A
SG
CYS
19
1_555
A
ZN
1001
E
ZN
ZN
1_555
A
CYS
471
A
SG
CYS
40
1_555
111.4
A
CYS
453
A
SG
CYS
22
1_555
A
ZN
1001
E
ZN
ZN
1_555
A
CYS
471
A
SG
CYS
40
1_555
116.7
A
CYS
450
A
SG
CYS
19
1_555
A
ZN
1001
E
ZN
ZN
1_555
A
CYS
474
A
SG
CYS
43
1_555
110.7
A
CYS
453
A
SG
CYS
22
1_555
A
ZN
1001
E
ZN
ZN
1_555
A
CYS
474
A
SG
CYS
43
1_555
111.1
A
CYS
471
A
SG
CYS
40
1_555
A
ZN
1001
E
ZN
ZN
1_555
A
CYS
474
A
SG
CYS
43
1_555
98.8
A
CYS
465
A
SG
CYS
34
1_555
A
ZN
1002
F
ZN
ZN
1_555
A
HIS
467
A
ND1
HIS
36
1_555
111.1
A
CYS
465
A
SG
CYS
34
1_555
A
ZN
1002
F
ZN
ZN
1_555
A
CYS
481
A
SG
CYS
50
1_555
109.4
A
HIS
467
A
ND1
HIS
36
1_555
A
ZN
1002
F
ZN
ZN
1_555
A
CYS
481
A
SG
CYS
50
1_555
102.5
A
CYS
465
A
SG
CYS
34
1_555
A
ZN
1002
F
ZN
ZN
1_555
A
CYS
484
A
SG
CYS
53
1_555
107.5
A
HIS
467
A
ND1
HIS
36
1_555
A
ZN
1002
F
ZN
ZN
1_555
A
CYS
484
A
SG
CYS
53
1_555
113.8
A
CYS
481
A
SG
CYS
50
1_555
A
ZN
1002
F
ZN
ZN
1_555
A
CYS
484
A
SG
CYS
53
1_555
112.4
B
CYS
450
B
SG
CYS
19
1_555
B
ZN
501
H
ZN
ZN
1_555
B
CYS
453
B
SG
CYS
22
1_555
106.9
B
CYS
450
B
SG
CYS
19
1_555
B
ZN
501
H
ZN
ZN
1_555
B
CYS
471
B
SG
CYS
40
1_555
111.8
B
CYS
453
B
SG
CYS
22
1_555
B
ZN
501
H
ZN
ZN
1_555
B
CYS
471
B
SG
CYS
40
1_555
115.6
B
CYS
450
B
SG
CYS
19
1_555
B
ZN
501
H
ZN
ZN
1_555
B
CYS
474
B
SG
CYS
43
1_555
109.7
B
CYS
453
B
SG
CYS
22
1_555
B
ZN
501
H
ZN
ZN
1_555
B
CYS
474
B
SG
CYS
43
1_555
113.6
B
CYS
471
B
SG
CYS
40
1_555
B
ZN
501
H
ZN
ZN
1_555
B
CYS
474
B
SG
CYS
43
1_555
99.2
B
CYS
465
B
SG
CYS
34
1_555
B
ZN
502
I
ZN
ZN
1_555
B
HIS
467
B
ND1
HIS
36
1_555
110.6
B
CYS
465
B
SG
CYS
34
1_555
B
ZN
502
I
ZN
ZN
1_555
B
CYS
481
B
SG
CYS
50
1_555
109.5
B
HIS
467
B
ND1
HIS
36
1_555
B
ZN
502
I
ZN
ZN
1_555
B
CYS
481
B
SG
CYS
50
1_555
104.4
B
CYS
465
B
SG
CYS
34
1_555
B
ZN
502
I
ZN
ZN
1_555
B
CYS
484
B
SG
CYS
53
1_555
106.6
B
HIS
467
B
ND1
HIS
36
1_555
B
ZN
502
I
ZN
ZN
1_555
B
CYS
484
B
SG
CYS
53
1_555
114.2
B
CYS
481
B
SG
CYS
50
1_555
B
ZN
502
I
ZN
ZN
1_555
B
CYS
484
B
SG
CYS
53
1_555
111.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
463
A
N
VAL
32
A
O
PHE
490
A
O
PHE
59
B
O
THR
470
B
O
THR
39
B
N
ILE
460
B
N
ILE
29
B
N
VAL
463
B
N
VAL
32
B
O
PHE
490
B
O
PHE
59
D
O
VAL
17
D
O
VAL
19
C
N
MET
1
C
N
MET
3
C
N
THR
6
C
N
THR
8
D
O
LEU
69
D
O
LEU
71
D
O
VAL
70
D
O
VAL
72
D
N
ARG
42
D
N
ARG
44
D
N
PHE
45
D
N
PHE
47
D
O
LYS
48
D
O
LYS
50
C
N
VAL
17
C
N
VAL
19
D
O
MET
1
D
O
MET
3
D
O
THR
6
D
O
THR
8
C
N
LEU
69
C
N
LEU
71
C
O
VAL
70
C
O
VAL
72
C
N
ARG
42
C
N
ARG
44
C
N
PHE
45
C
N
PHE
47
C
O
LYS
48
C
O
LYS
50
1
C
CD
LYS
48
C
CD
LYS
50
0
Y
1
C
CE
LYS
48
C
CE
LYS
50
0
Y
1
C
NZ
LYS
48
C
NZ
LYS
50
0
Y
1
D
CG
LYS
64
D
CG
LYS
66
0
Y
1
D
CD
LYS
64
D
CD
LYS
66
0
Y
1
D
CE
LYS
64
D
CE
LYS
66
0
Y
1
D
NZ
LYS
64
D
NZ
LYS
66
0
Y
1
A
GLY
432
A
GLY
1
1
Y
1
A
SER
433
A
SER
2
1
Y
1
B
GLY
432
B
GLY
1
1
Y
1
B
SER
433
B
SER
2
1
Y
1
B
GLU
434
B
GLU
3
1
Y
1
C
GLY
-1
C
GLY
1
1
Y
1
C
ARG
75
C
ARG
77
1
Y
1
C
VAL
76
C
VAL
78
1
Y
1
C
ALA
77
C
ALA
79
1
Y
1
C
SER
78
C
SER
80
1
Y
1
D
GLY
-1
D
GLY
1
1
Y
1
D
HIS
74
D
HIS
76
1
Y
1
D
ARG
75
D
ARG
77
1
Y
1
D
VAL
76
D
VAL
78
1
Y
1
D
ALA
77
D
ALA
79
1
Y
1
D
SER
78
D
SER
80
1
Y
1
A
ASP
455
-130.23
-57.44
1
A
ALA
459
-143.42
-2.72
1
B
ASP
455
-135.41
-63.58
1
B
ALA
459
-141.13
-11.04
1
B
ALA
459
-146.25
-11.04
1
C
PHE
73
71.57
-154.85
29.69
1.28560
0.00000
0.00000
1.89390
0.00000
-3.17950
0.964
0.955
0.183
0.000
0.156
0.158
1.57
43.18
1950
39161
4.980
99.6
0.088
RANDOM
1
THROUGHOUT
0.000
MOLECULAR REPLACEMENT
0.076
0.076
0.073
3EB5, 1UBQ
0.17
1.57
43.18
218
2432
12
0
2202
0.010
4741
HARMONIC
2.00
1.15
8653
HARMONIC
2.00
1104
SINUSOIDAL
2.00
71
HARMONIC
2.00
670
HARMONIC
5.00
4741
HARMONIC
20.00
2
SEMIHARMONIC
5.00
4.34
14.06
330
SEMIHARMONIC
5.00
5386
SEMIHARMONIC
4.00
0.241
0.000
0.200
0.202
1.61
128
2606
2734
20
4.68
95.35
20.57
1.57
69.97
5O6T
39227
0.074
0.042
1
14.9
6.4
100
0.89
1.57
1.577
2.0
2560
0.663
0.513
1
6.5
96.3
refinement
BUSTER
2.10.2
data reduction
xia2
data scaling
Aimless
phasing
PHASER
N
BIRC4 RING in complex with dimeric ubiquitin variant
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
SER
436
A
SER
5
HELX_P
A
LYS
448
A
LYS
17
1
AA1
13
A
CYS
471
A
CYS
40
HELX_P
A
GLU
476
A
GLU
45
1
AA2
6
B
SER
436
B
SER
5
HELX_P
B
LYS
448
B
LYS
17
1
AA3
13
B
CYS
471
B
CYS
40
HELX_P
B
GLU
476
B
GLU
45
1
AA4
6
C
THR
22
C
THR
24
HELX_P
C
GLY
35
C
GLY
37
1
AA5
14
C
PRO
37
C
PRO
39
HELX_P
C
ASP
39
C
ASP
41
5
AA6
3
C
LEU
56
C
LEU
58
HELX_P
C
ASN
60
C
ASN
62
5
AA7
5
D
THR
22
D
THR
24
HELX_P
D
GLY
35
D
GLY
37
1
AA8
14
D
PRO
37
D
PRO
39
HELX_P
D
ASP
39
D
ASP
41
5
AA9
3
D
LEU
56
D
LEU
58
HELX_P
D
ASN
60
D
ASN
62
5
AB1
5
metalc
2.350
A
CYS
450
A
SG
CYS
19
1_555
A
ZN
1001
E
ZN
ZN
1_555
metalc
2.312
A
CYS
453
A
SG
CYS
22
1_555
A
ZN
1001
E
ZN
ZN
1_555
metalc
2.314
A
CYS
465
A
SG
CYS
34
1_555
A
ZN
1002
F
ZN
ZN
1_555
metalc
1.981
A
HIS
467
A
ND1
HIS
36
1_555
A
ZN
1002
F
ZN
ZN
1_555
metalc
2.360
A
CYS
471
A
SG
CYS
40
1_555
A
ZN
1001
E
ZN
ZN
1_555
metalc
2.345
A
CYS
474
A
SG
CYS
43
1_555
A
ZN
1001
E
ZN
ZN
1_555
metalc
2.333
A
CYS
481
A
SG
CYS
50
1_555
A
ZN
1002
F
ZN
ZN
1_555
metalc
2.341
A
CYS
484
A
SG
CYS
53
1_555
A
ZN
1002
F
ZN
ZN
1_555
metalc
2.344
B
CYS
450
B
SG
CYS
19
1_555
B
ZN
501
H
ZN
ZN
1_555
metalc
2.294
B
CYS
453
B
SG
CYS
22
1_555
B
ZN
501
H
ZN
ZN
1_555
metalc
2.338
B
CYS
465
B
SG
CYS
34
1_555
B
ZN
502
I
ZN
ZN
1_555
metalc
2.012
B
HIS
467
B
ND1
HIS
36
1_555
B
ZN
502
I
ZN
ZN
1_555
metalc
2.342
B
CYS
471
B
SG
CYS
40
1_555
B
ZN
501
H
ZN
ZN
1_555
metalc
2.334
B
CYS
474
B
SG
CYS
43
1_555
B
ZN
501
H
ZN
ZN
1_555
metalc
2.346
B
CYS
481
B
SG
CYS
50
1_555
B
ZN
502
I
ZN
ZN
1_555
metalc
2.340
B
CYS
484
B
SG
CYS
53
1_555
B
ZN
502
I
ZN
ZN
1_555
LIGASE
E3 ring ligase, ubiquitin variant, LIGASE
A
VAL
463
A
VAL
32
1
A
PRO
464
A
PRO
33
16.60
B
VAL
463
B
VAL
32
1
B
PRO
464
B
PRO
33
16.17
XIAP_HUMAN
UNP
1
434
P98170
EISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
UBB_HUMAN
UNP
2
75
P0CG47
GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
434
497
5O6T
434
497
P98170
A
1
3
66
434
497
5O6T
434
497
P98170
B
1
3
66
75
150
5O6T
-1
74
P0CG47
C
2
1
76
75
150
5O6T
-1
74
P0CG47
D
2
1
76
1
expression tag
GLY
432
5O6T
A
P98170
UNP
1
1
expression tag
SER
433
5O6T
A
P98170
UNP
2
2
expression tag
GLY
432
5O6T
B
P98170
UNP
1
2
expression tag
SER
433
5O6T
B
P98170
UNP
2
3
GLY
conflict
SER
0
5O6T
C
P0CG47
UNP
76
2
3
PHE
conflict
LEU
4
5O6T
C
P0CG47
UNP
80
6
3
LYS
conflict
THR
6
5O6T
C
P0CG47
UNP
82
8
3
LEU
conflict
ILE
8
5O6T
C
P0CG47
UNP
84
10
3
THR
conflict
SER
9
5O6T
C
P0CG47
UNP
85
11
3
GLY
conflict
ALA
10
5O6T
C
P0CG47
UNP
86
12
3
LYS
conflict
GLU
11
5O6T
C
P0CG47
UNP
87
13
3
THR
conflict
ARG
14
5O6T
C
P0CG47
UNP
90
16
3
ILE
conflict
PHE
44
5O6T
C
P0CG47
UNP
120
46
3
ALA
conflict
GLU
46
5O6T
C
P0CG47
UNP
122
48
3
GLN
conflict
ASN
62
5O6T
C
P0CG47
UNP
138
64
3
GLU
conflict
LYS
64
5O6T
C
P0CG47
UNP
140
66
3
HIS
conflict
LEU
68
5O6T
C
P0CG47
UNP
144
70
3
LEU
conflict
VAL
71
5O6T
C
P0CG47
UNP
147
73
3
ARG
conflict
LYS
72
5O6T
C
P0CG47
UNP
148
74
3
LEU
conflict
PHE
73
5O6T
C
P0CG47
UNP
149
75
3
ARG
conflict
HIS
74
5O6T
C
P0CG47
UNP
150
76
3
expression tag
ARG
75
5O6T
C
P0CG47
UNP
77
3
expression tag
VAL
76
5O6T
C
P0CG47
UNP
78
3
expression tag
ALA
77
5O6T
C
P0CG47
UNP
79
3
expression tag
SER
78
5O6T
C
P0CG47
UNP
80
4
GLY
conflict
SER
0
5O6T
D
P0CG47
UNP
76
2
4
PHE
conflict
LEU
4
5O6T
D
P0CG47
UNP
80
6
4
LYS
conflict
THR
6
5O6T
D
P0CG47
UNP
82
8
4
LEU
conflict
ILE
8
5O6T
D
P0CG47
UNP
84
10
4
THR
conflict
SER
9
5O6T
D
P0CG47
UNP
85
11
4
GLY
conflict
ALA
10
5O6T
D
P0CG47
UNP
86
12
4
LYS
conflict
GLU
11
5O6T
D
P0CG47
UNP
87
13
4
THR
conflict
ARG
14
5O6T
D
P0CG47
UNP
90
16
4
ILE
conflict
PHE
44
5O6T
D
P0CG47
UNP
120
46
4
ALA
conflict
GLU
46
5O6T
D
P0CG47
UNP
122
48
4
GLN
conflict
ASN
62
5O6T
D
P0CG47
UNP
138
64
4
GLU
conflict
LYS
64
5O6T
D
P0CG47
UNP
140
66
4
HIS
conflict
LEU
68
5O6T
D
P0CG47
UNP
144
70
4
LEU
conflict
VAL
71
5O6T
D
P0CG47
UNP
147
73
4
ARG
conflict
LYS
72
5O6T
D
P0CG47
UNP
148
74
4
LEU
conflict
PHE
73
5O6T
D
P0CG47
UNP
149
75
4
ARG
conflict
HIS
74
5O6T
D
P0CG47
UNP
150
76
4
expression tag
ARG
75
5O6T
D
P0CG47
UNP
77
4
expression tag
VAL
76
5O6T
D
P0CG47
UNP
78
4
expression tag
ALA
77
5O6T
D
P0CG47
UNP
79
4
expression tag
SER
78
5O6T
D
P0CG47
UNP
80
2
3
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
ILE
460
A
ILE
29
A
VAL
463
A
VAL
32
A
PHE
490
A
PHE
59
A
LYS
493
A
LYS
62
B
LEU
468
B
LEU
37
B
THR
470
B
THR
39
B
ILE
460
B
ILE
29
B
VAL
463
B
VAL
32
B
PHE
490
B
PHE
59
B
LYS
493
B
LYS
62
D
ILE
13
D
ILE
15
D
VAL
17
D
VAL
19
C
MET
1
C
MET
3
C
SER
9
C
SER
11
D
THR
66
D
THR
68
D
VAL
71
D
VAL
73
D
GLN
41
D
GLN
43
D
PHE
45
D
PHE
47
D
LYS
48
D
LYS
50
D
GLN
49
D
GLN
51
C
ILE
13
C
ILE
15
C
VAL
17
C
VAL
19
D
MET
1
D
MET
3
D
SER
9
D
SER
11
C
THR
66
C
THR
68
C
VAL
71
C
VAL
73
C
GLN
41
C
GLN
43
C
PHE
45
C
PHE
47
C
LYS
48
C
LYS
50
C
GLN
49
C
GLN
51
binding site for residue ZN A 1001
A
ZN
1001
Software
4
binding site for residue ZN A 1002
A
ZN
1002
Software
4
binding site for residue EDO A 1003
A
EDO
1003
Software
4
binding site for residue ZN B 501
B
ZN
501
Software
4
binding site for residue ZN B 502
B
ZN
502
Software
4
binding site for residue EDO B 503
B
EDO
503
Software
4
A
CYS
450
A
CYS
19
4
1_555
A
CYS
453
A
CYS
22
4
1_555
A
CYS
471
A
CYS
40
4
1_555
A
CYS
474
A
CYS
43
4
1_555
A
CYS
465
A
CYS
34
4
1_555
A
HIS
467
A
HIS
36
4
1_555
A
CYS
481
A
CYS
50
4
1_555
A
CYS
484
A
CYS
53
4
1_555
A
PHE
495
A
PHE
64
4
1_555
A
SER
497
A
SER
66
4
1_555
A
HOH
1128
K
HOH
4
1_555
C
ARG
54
C
ARG
56
4
3_747
B
CYS
450
B
CYS
19
4
1_555
B
CYS
453
B
CYS
22
4
1_555
B
CYS
471
B
CYS
40
4
1_555
B
CYS
474
B
CYS
43
4
1_555
B
CYS
465
B
CYS
34
4
1_555
B
HIS
467
B
HIS
36
4
1_555
B
CYS
481
B
CYS
50
4
1_555
B
CYS
484
B
CYS
53
4
1_555
B
MET
496
B
MET
65
4
1_555
B
SER
497
B
SER
66
4
1_555
D
ARG
54
D
ARG
56
4
3_757
D
ASP
58
D
ASP
60
4
3_757
19
P 21 21 21