0.020092
0.011600
0.000000
0.000000
0.023201
0.000000
0.000000
0.000000
0.011202
0.00000
0.00000
0.00000
Gladkova, C.
Schubert, A.F.
Wagstaff, J.L.
Pruneda, J.P.
Freund, S.M.V.
Komander, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
49.770
49.770
89.270
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H8 N O6 P
185.072
n
PHOSPHOSERINE
PHOSPHONOSERINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
P
N
284
N
O
N
285
N
O
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
N
300
N
O
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
S
N
310
N
O
N
311
N
O
N
312
N
O
N
313
N
O
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
R
C
N
319
N
O
N
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
doub
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
UK
EMBO J.
EMJODG
0897
1460-2075
36
3555
3572
10.15252/embj.201797876
29133469
An invisible ubiquitin conformation is required for efficient phosphorylation by PINK1.
2017
10.2210/pdb5oxh/pdb
pdb_00005oxh
100
1
IMAGE PLATE
2015-03-03
MAR scanner 345 mm plate
SINGLE WAVELENGTH
M
x-ray
1
1.54179
1.0
1.54179
ROTATING ANODE
RIGAKU FR-E+ SUPERBRIGHT
8655.783
Ubiquitin T66V/L67N mutant
T66V, L67N
1
man
polymer
96.063
SULFATE ION
8
syn
non-polymer
18.015
water
170
nat
water
no
yes
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE(SEP)VNHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESVNHLVLRLRGG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
76
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
3.73
67.01
VAPOR DIFFUSION, SITTING DROP
9.0
3.2 M ammonium sulfate, 0.1 M bicine (pH 9.0); 1:1 protein to reservoir ratio
291
citation
citation_author
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Database references
Author supporting evidence
Data collection
Database references
Refinement description
1
0
2017-11-22
1
1
2017-12-27
1
2
2018-01-31
1
3
2024-01-17
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation_author.name
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United Kingdom
Medical Research Council (United Kingdom)
U105192732
United Kingdom
European Research Council
309756
United Kingdom
Lister Institute for Preventive Medicine
N
PDBE
Y
PDBE
2017-09-06
REL
REL
1
A
O
HOH
370
6.07
SO4
SULFATE ION
HOH
water
1UBQ
1UBQ, aa 1-59
PDB
experimental model
SO4
1
2
SO4
SO4
101
A
SO4
3
2
SO4
SO4
102
A
SO4
4
2
SO4
SO4
103
A
SO4
5
2
SO4
SO4
104
A
SO4
6
2
SO4
SO4
105
A
SO4
7
2
SO4
SO4
106
A
SO4
9
2
SO4
SO4
107
A
SO4
10
2
SO4
SO4
108
A
HOH
371
3
HOH
HOH
201
A
HOH
329
3
HOH
HOH
202
A
HOH
372
3
HOH
HOH
203
A
HOH
368
3
HOH
HOH
204
A
HOH
213
3
HOH
HOH
205
A
HOH
253
3
HOH
HOH
206
A
HOH
144
3
HOH
HOH
207
A
HOH
146
3
HOH
HOH
208
A
HOH
17
3
HOH
HOH
209
A
HOH
249
3
HOH
HOH
210
A
HOH
248
3
HOH
HOH
211
A
HOH
278
3
HOH
HOH
212
A
HOH
361
3
HOH
HOH
213
A
HOH
326
3
HOH
HOH
214
A
HOH
366
3
HOH
HOH
215
A
HOH
323
3
HOH
HOH
216
A
HOH
376
3
HOH
HOH
217
A
HOH
212
3
HOH
HOH
218
A
HOH
50
3
HOH
HOH
219
A
HOH
127
3
HOH
HOH
220
A
HOH
132
3
HOH
HOH
221
A
HOH
138
3
HOH
HOH
222
A
HOH
42
3
HOH
HOH
223
A
HOH
357
3
HOH
HOH
224
A
HOH
343
3
HOH
HOH
225
A
HOH
222
3
HOH
HOH
226
A
HOH
37
3
HOH
HOH
227
A
HOH
149
3
HOH
HOH
228
A
HOH
11
3
HOH
HOH
229
A
HOH
354
3
HOH
HOH
230
A
HOH
1
3
HOH
HOH
231
A
HOH
27
3
HOH
HOH
232
A
HOH
254
3
HOH
HOH
233
A
HOH
356
3
HOH
HOH
234
A
HOH
6
3
HOH
HOH
235
A
HOH
14
3
HOH
HOH
236
A
HOH
8
3
HOH
HOH
237
A
HOH
15
3
HOH
HOH
238
A
HOH
276
3
HOH
HOH
239
A
HOH
124
3
HOH
HOH
240
A
HOH
136
3
HOH
HOH
241
A
HOH
30
3
HOH
HOH
242
A
HOH
47
3
HOH
HOH
243
A
HOH
125
3
HOH
HOH
244
A
HOH
123
3
HOH
HOH
245
A
HOH
9
3
HOH
HOH
246
A
HOH
5
3
HOH
HOH
247
A
HOH
217
3
HOH
HOH
248
A
HOH
264
3
HOH
HOH
249
A
HOH
215
3
HOH
HOH
250
A
HOH
359
3
HOH
HOH
251
A
HOH
20
3
HOH
HOH
252
A
HOH
56
3
HOH
HOH
253
A
HOH
322
3
HOH
HOH
254
A
HOH
54
3
HOH
HOH
255
A
HOH
244
3
HOH
HOH
256
A
HOH
284
3
HOH
HOH
257
A
HOH
316
3
HOH
HOH
258
A
HOH
7
3
HOH
HOH
259
A
HOH
369
3
HOH
HOH
260
A
HOH
31
3
HOH
HOH
261
A
HOH
23
3
HOH
HOH
262
A
HOH
370
3
HOH
HOH
263
A
HOH
330
3
HOH
HOH
264
A
HOH
34
3
HOH
HOH
265
A
HOH
2
3
HOH
HOH
266
A
HOH
71
3
HOH
HOH
267
A
HOH
4
3
HOH
HOH
268
A
HOH
70
3
HOH
HOH
269
A
HOH
44
3
HOH
HOH
270
A
HOH
43
3
HOH
HOH
271
A
HOH
24
3
HOH
HOH
272
A
HOH
223
3
HOH
HOH
273
A
HOH
21
3
HOH
HOH
274
A
HOH
13
3
HOH
HOH
275
A
HOH
12
3
HOH
HOH
276
A
HOH
25
3
HOH
HOH
277
A
HOH
158
3
HOH
HOH
278
A
HOH
66
3
HOH
HOH
279
A
HOH
18
3
HOH
HOH
280
A
HOH
270
3
HOH
HOH
281
A
HOH
285
3
HOH
HOH
282
A
HOH
35
3
HOH
HOH
283
A
HOH
22
3
HOH
HOH
284
A
HOH
19
3
HOH
HOH
285
A
HOH
277
3
HOH
HOH
286
A
HOH
33
3
HOH
HOH
287
A
HOH
40
3
HOH
HOH
288
A
HOH
168
3
HOH
HOH
289
A
HOH
126
3
HOH
HOH
290
A
HOH
131
3
HOH
HOH
291
A
HOH
379
3
HOH
HOH
292
A
HOH
26
3
HOH
HOH
293
A
HOH
119
3
HOH
HOH
294
A
HOH
350
3
HOH
HOH
295
A
HOH
375
3
HOH
HOH
296
A
HOH
72
3
HOH
HOH
297
A
HOH
328
3
HOH
HOH
298
A
HOH
155
3
HOH
HOH
299
A
HOH
203
3
HOH
HOH
300
A
HOH
304
3
HOH
HOH
301
A
HOH
134
3
HOH
HOH
302
A
HOH
32
3
HOH
HOH
303
A
HOH
325
3
HOH
HOH
304
A
HOH
239
3
HOH
HOH
305
A
HOH
362
3
HOH
HOH
306
A
HOH
279
3
HOH
HOH
307
A
HOH
129
3
HOH
HOH
308
A
HOH
112
3
HOH
HOH
309
A
HOH
154
3
HOH
HOH
310
A
HOH
245
3
HOH
HOH
311
A
HOH
63
3
HOH
HOH
312
A
HOH
49
3
HOH
HOH
313
A
HOH
367
3
HOH
HOH
314
A
HOH
216
3
HOH
HOH
315
A
HOH
135
3
HOH
HOH
316
A
HOH
10
3
HOH
HOH
317
A
HOH
233
3
HOH
HOH
318
A
HOH
202
3
HOH
HOH
319
A
HOH
337
3
HOH
HOH
320
A
HOH
324
3
HOH
HOH
321
A
HOH
211
3
HOH
HOH
322
A
HOH
378
3
HOH
HOH
323
A
HOH
341
3
HOH
HOH
324
A
HOH
269
3
HOH
HOH
325
A
HOH
344
3
HOH
HOH
326
A
HOH
336
3
HOH
HOH
327
A
HOH
259
3
HOH
HOH
328
A
HOH
360
3
HOH
HOH
329
A
HOH
317
3
HOH
HOH
330
A
HOH
39
3
HOH
HOH
331
A
HOH
268
3
HOH
HOH
332
A
HOH
358
3
HOH
HOH
333
A
HOH
110
3
HOH
HOH
334
A
HOH
224
3
HOH
HOH
335
A
HOH
364
3
HOH
HOH
336
A
HOH
231
3
HOH
HOH
337
A
HOH
353
3
HOH
HOH
338
A
HOH
335
3
HOH
HOH
339
A
HOH
251
3
HOH
HOH
340
A
HOH
219
3
HOH
HOH
341
A
HOH
247
3
HOH
HOH
342
A
HOH
242
3
HOH
HOH
343
A
HOH
51
3
HOH
HOH
344
A
HOH
272
3
HOH
HOH
345
A
HOH
318
3
HOH
HOH
346
A
HOH
41
3
HOH
HOH
347
A
HOH
28
3
HOH
HOH
348
A
HOH
352
3
HOH
HOH
349
A
HOH
214
3
HOH
HOH
350
A
HOH
373
3
HOH
HOH
351
A
HOH
363
3
HOH
HOH
352
A
HOH
121
3
HOH
HOH
353
A
HOH
321
3
HOH
HOH
354
A
HOH
109
3
HOH
HOH
355
A
HOH
320
3
HOH
HOH
356
A
HOH
365
3
HOH
HOH
357
A
HOH
250
3
HOH
HOH
358
A
HOH
218
3
HOH
HOH
359
A
HOH
305
3
HOH
HOH
360
A
HOH
235
3
HOH
HOH
361
A
HOH
346
3
HOH
HOH
362
A
HOH
374
3
HOH
HOH
363
A
HOH
319
3
HOH
HOH
364
A
HOH
252
3
HOH
HOH
365
A
HOH
377
3
HOH
HOH
366
A
HOH
111
3
HOH
HOH
367
A
HOH
246
3
HOH
HOH
368
A
HOH
340
3
HOH
HOH
369
A
HOH
327
3
HOH
HOH
370
A
MET
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
ILE
3
n
3
ILE
3
A
PHE
4
n
4
PHE
4
A
VAL
5
n
5
VAL
5
A
LYS
6
n
6
LYS
6
A
THR
7
n
7
THR
7
A
LEU
8
n
8
LEU
8
A
THR
9
n
9
THR
9
A
GLY
10
n
10
GLY
10
A
LYS
11
n
11
LYS
11
A
THR
12
n
12
THR
12
A
ILE
13
n
13
ILE
13
A
THR
14
n
14
THR
14
A
LEU
15
n
15
LEU
15
A
GLU
16
n
16
GLU
16
A
VAL
17
n
17
VAL
17
A
GLU
18
n
18
GLU
18
A
PRO
19
n
19
PRO
19
A
SER
20
n
20
SER
20
A
ASP
21
n
21
ASP
21
A
THR
22
n
22
THR
22
A
ILE
23
n
23
ILE
23
A
GLU
24
n
24
GLU
24
A
ASN
25
n
25
ASN
25
A
VAL
26
n
26
VAL
26
A
LYS
27
n
27
LYS
27
A
ALA
28
n
28
ALA
28
A
LYS
29
n
29
LYS
29
A
ILE
30
n
30
ILE
30
A
GLN
31
n
31
GLN
31
A
ASP
32
n
32
ASP
32
A
LYS
33
n
33
LYS
33
A
GLU
34
n
34
GLU
34
A
GLY
35
n
35
GLY
35
A
ILE
36
n
36
ILE
36
A
PRO
37
n
37
PRO
37
A
PRO
38
n
38
PRO
38
A
ASP
39
n
39
ASP
39
A
GLN
40
n
40
GLN
40
A
GLN
41
n
41
GLN
41
A
ARG
42
n
42
ARG
42
A
LEU
43
n
43
LEU
43
A
ILE
44
n
44
ILE
44
A
PHE
45
n
45
PHE
45
A
ALA
46
n
46
ALA
46
A
GLY
47
n
47
GLY
47
A
LYS
48
n
48
LYS
48
A
GLN
49
n
49
GLN
49
A
LEU
50
n
50
LEU
50
A
GLU
51
n
51
GLU
51
A
ASP
52
n
52
ASP
52
A
GLY
53
n
53
GLY
53
A
ARG
54
n
54
ARG
54
A
THR
55
n
55
THR
55
A
LEU
56
n
56
LEU
56
A
SER
57
n
57
SER
57
A
ASP
58
n
58
ASP
58
A
TYR
59
n
59
TYR
59
A
ASN
60
n
60
ASN
60
A
ILE
61
n
61
ILE
61
A
GLN
62
n
62
GLN
62
A
LYS
63
n
63
LYS
63
A
GLU
64
n
64
GLU
64
A
SEP
65
n
65
SEP
65
A
VAL
66
n
66
VAL
66
A
ASN
67
n
67
ASN
67
A
HIS
68
n
68
HIS
68
A
LEU
69
n
69
LEU
69
A
VAL
70
n
70
VAL
70
A
LEU
71
n
71
LEU
71
A
ARG
72
n
72
ARG
72
A
LEU
73
n
73
LEU
73
A
ARG
74
n
74
ARG
74
A
GLY
75
n
75
GLY
75
A
GLY
76
n
76
GLY
76
A
author_and_software_defined_assembly
PISA
1
monomeric
gel filtration
980
-65
5210
A
SEP
65
modified residue
A
SEP
65
SER
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
15
A
O
LEU
15
A
N
ILE
3
A
N
ILE
3
A
N
LYS
6
A
N
LYS
6
A
O
LEU
69
A
O
LEU
69
A
O
ARG
72
A
O
ARG
72
A
N
ARG
42
A
N
ARG
42
A
N
PHE
45
A
N
PHE
45
A
O
LYS
48
A
O
LYS
48
1
A
CD
GLU
24
A
CD
GLU
24
1
Y
1
A
OE1
GLU
24
A
OE1
GLU
24
1
Y
1
A
OE2
GLU
24
A
OE2
GLU
24
1
Y
1
A
A
O
O
HOH
HOH
212
250
1.88
1
A
A
O3
O
SO4
HOH
108
201
1.93
1
A
A
O
O
HOH
HOH
296
351
2.02
1
A
A
O
O
HOH
HOH
212
308
2.03
1
A
A
NE2
O
GLN
HOH
49
202
2.03
1
A
A
O1
O
SO4
HOH
108
203
2.07
1
A
A
O
O
HOH
HOH
250
318
2.07
1
A
A
O
O
HOH
HOH
299
333
2.12
1
A
A
O1
O
SO4
HOH
103
204
2.13
1
A
A
O4
O
SO4
HOH
102
205
2.15
1
A
A
O
O
HOH
HOH
203
249
2.17
1
A
A
O
O
HOH
HOH
315
318
2.15
1_555
4_545
1
A
A
O
O
HOH
HOH
326
335
2.16
1_555
4_655
0.2229
0.1915
0.1931
1.601
24.885
842
17205
4.89
98.51
0.14
1
FREE R-VALUE
1.34
MOLECULAR REPLACEMENT
22.85
0.90
1.11
1UBQ, aa 1-59
1.601
24.885
170
813
40
0
603
0.010
647
1.073
877
8.336
541
0.067
97
0.007
107
0.2270
0.1857
1.7009
125
2633
97.00
0.2655
0.1998
1.8322
123
2683
98.00
0.2437
0.2079
2.0165
143
2643
98.00
0.1950
0.1935
2.3081
123
2751
99.00
0.2246
0.1939
2.9073
146
2775
100.00
0.2209
0.1846
24.8880
182
2878
100.00
1.601
24.885
5OXH
17205
0.056
1
22.8
7.4
98.47
0.227
1.601
1.658
1675
1
96.49
refinement
PHENIX
(1.11.1_2575: ???)
data reduction
iMOSFLM
data scaling
Aimless
phasing
PHASER
N
C-terminally retracted ubiquitin T66V/L67N mutant
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
THR
22
A
THR
22
HELX_P
A
GLY
35
A
GLY
35
1
AA1
14
A
PRO
37
A
PRO
37
HELX_P
A
ASP
39
A
ASP
39
5
AA2
3
A
THR
55
A
THR
55
HELX_P
A
ASN
60
A
ASN
60
5
AA3
6
covale
1.326
both
A
GLU
64
A
C
GLU
64
1_555
A
SEP
65
A
N
SEP
65
1_555
covale
1.327
both
A
SEP
65
A
C
SEP
65
1_555
A
VAL
66
A
N
VAL
66
1_555
SIGNALING PROTEIN
ubiquitin, post-translational modifier, signaling protein
UBC_HUMAN
UNP
1
1
P0CG48
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
1
76
5OXH
1
76
P0CG48
A
1
1
76
1
THR
engineered mutation
VAL
66
5OXH
A
P0CG48
UNP
66
66
1
LEU
engineered mutation
ASN
67
5OXH
A
P0CG48
UNP
67
67
5
anti-parallel
parallel
anti-parallel
anti-parallel
A
THR
12
A
THR
12
A
GLU
16
A
GLU
16
A
GLN
2
A
GLN
2
A
LYS
6
A
LYS
6
A
HIS
68
A
HIS
68
A
LEU
73
A
LEU
73
A
GLN
41
A
GLN
41
A
PHE
45
A
PHE
45
A
LYS
48
A
LYS
48
A
GLN
49
A
GLN
49
binding site for residue SO4 A 101
A
SO4
101
Software
7
binding site for residue SO4 A 102
A
SO4
102
Software
5
binding site for residue SO4 A 103
A
SO4
103
Software
3
binding site for residue SO4 A 104
A
SO4
104
Software
3
binding site for residue SO4 A 105
A
SO4
105
Software
6
binding site for residue SO4 A 106
A
SO4
106
Software
6
binding site for residue SO4 A 107
A
SO4
107
Software
6
binding site for residue SO4 A 108
A
SO4
108
Software
8
A
THR
12
A
THR
12
7
1_555
A
ILE
13
A
ILE
13
7
1_555
A
THR
14
A
THR
14
7
1_555
A
ARG
54
A
ARG
54
7
4_655
A
HOH
219
J
HOH
7
1_555
A
HOH
225
J
HOH
7
1_555
A
HOH
287
J
HOH
7
1_555
A
ARG
42
A
ARG
42
5
1_555
A
ARG
74
A
ARG
74
5
1_555
A
GLY
75
A
GLY
75
5
1_555
A
HOH
205
J
HOH
5
1_555
A
HOH
291
J
HOH
5
1_555
A
ARG
42
A
ARG
42
3
1_555
A
ARG
72
A
ARG
72
3
1_555
A
HOH
204
J
HOH
3
1_555
A
GLN
49
A
GLN
49
3
1_555
A
ARG
74
A
ARG
74
3
1_555
A
HOH
264
J
HOH
3
1_555
A
GLU
51
A
GLU
51
6
1_555
A
ARG
54
A
ARG
54
6
1_555
A
HOH
207
J
HOH
6
1_555
A
HOH
213
J
HOH
6
1_555
A
HOH
223
J
HOH
6
1_555
A
HOH
292
J
HOH
6
1_555
A
LYS
33
A
LYS
33
6
1_555
A
ASN
60
A
ASN
60
6
3_655
A
LYS
63
A
LYS
63
6
3_655
A
HOH
228
J
HOH
6
3_655
A
HOH
279
J
HOH
6
1_555
A
HOH
300
J
HOH
6
1_555
A
SER
20
A
SER
20
6
1_555
A
ARG
72
A
ARG
72
6
4_545
A
HOH
248
J
HOH
6
1_555
A
HOH
260
J
HOH
6
1_555
A
HOH
271
J
HOH
6
1_555
A
HOH
273
J
HOH
6
1_555
A
LYS
6
A
LYS
6
8
1_555
A
ASP
21
A
ASP
21
8
4_655
A
THR
22
A
THR
22
8
4_655
A
ASN
25
A
ASN
25
8
4_655
A
HOH
201
J
HOH
8
1_555
A
HOH
203
J
HOH
8
1_555
A
HOH
239
J
HOH
8
1_555
A
HOH
249
J
HOH
8
1_555
154
P 32 2 1