0.022186 0.000000 0.007865 0.000000 0.013706 0.000000 0.000000 0.000000 0.020211 0.000000 0.000000 0.000000 Schiebel, J. Heine, A. Klebe, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.000 109.520 90.000 45.074 72.960 52.495 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 1878-4186 24 1398 1409 10.1016/j.str.2016.06.010 27452405 High-Throughput Crystallography: Reliable and Efficient Identification of Fragment Hits. 2016 10.2210/pdb5p05/pdb pdb_00005p05 100 1 CCD 2012-11-16 MARMOSAIC 225 mm CCD SINGLE WAVELENGTH M x-ray 1 0.8912 1.0 14.1 BESSY 0.8912 SYNCHROTRON BESSY BEAMLINE 14.1 33813.855 endothiapepsin 3.4.23.22 1 nat polymer 18.015 water 152 nat water no no STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLSGATWSISYG DGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTAD LGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS GAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGA TTPTLGFASK STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLSGATWSISYG DGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTAD LGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS GAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGA TTPTLGFASK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 5116 Cryphonectria parasitica 1 2.41 48.88 VAPOR DIFFUSION, SITTING DROP 4.6 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000; crystal obtained by streak-seeding and soaked with 90 mM of fragment 52 with the SMILES code NCC(=O)C1=CC=C(Br)C=C1 290 pdbx_deposit_group database_2 pdbx_deposit_group repository Initial release Database references Database references Structure summary Database references Structure summary 1 0 2016-08-03 1 1 2016-08-10 1 2 2017-01-11 1 3 2018-02-21 1 4 2021-11-17 _pdbx_deposit_group.group_type _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_deposit_group.group_description RCSB Y RCSB 2016-06-28 REL REL High-Throughput Crystallography: Reliable and Efficient Identification of Fragment Hits. High-Throughput Crystallography: Reliable and Efficient Identification of Fragment Hits. undefined HOH water HOH 151 2 HOH HOH 401 A HOH 41 2 HOH HOH 402 A HOH 17 2 HOH HOH 403 A HOH 117 2 HOH HOH 404 A HOH 147 2 HOH HOH 405 A HOH 83 2 HOH HOH 406 A HOH 75 2 HOH HOH 407 A HOH 145 2 HOH HOH 408 A HOH 87 2 HOH HOH 409 A HOH 54 2 HOH HOH 410 A HOH 162 2 HOH HOH 411 A HOH 124 2 HOH HOH 412 A HOH 134 2 HOH HOH 413 A HOH 13 2 HOH HOH 414 A HOH 6 2 HOH HOH 415 A HOH 50 2 HOH HOH 416 A HOH 22 2 HOH HOH 417 A HOH 3 2 HOH HOH 418 A HOH 24 2 HOH HOH 419 A HOH 8 2 HOH HOH 420 A HOH 23 2 HOH HOH 421 A HOH 52 2 HOH HOH 422 A HOH 77 2 HOH HOH 423 A HOH 76 2 HOH HOH 424 A HOH 18 2 HOH HOH 425 A HOH 78 2 HOH HOH 426 A HOH 74 2 HOH HOH 427 A HOH 96 2 HOH HOH 428 A HOH 160 2 HOH HOH 429 A HOH 114 2 HOH HOH 430 A HOH 141 2 HOH HOH 431 A HOH 28 2 HOH HOH 432 A HOH 132 2 HOH HOH 433 A HOH 25 2 HOH HOH 434 A HOH 44 2 HOH HOH 435 A HOH 98 2 HOH HOH 436 A HOH 10 2 HOH HOH 437 A HOH 5 2 HOH HOH 438 A HOH 67 2 HOH HOH 439 A HOH 15 2 HOH HOH 440 A HOH 161 2 HOH HOH 441 A HOH 116 2 HOH HOH 442 A HOH 123 2 HOH HOH 443 A HOH 36 2 HOH HOH 444 A HOH 55 2 HOH HOH 445 A HOH 27 2 HOH HOH 446 A HOH 49 2 HOH HOH 447 A HOH 139 2 HOH HOH 448 A HOH 9 2 HOH HOH 449 A HOH 73 2 HOH HOH 450 A HOH 30 2 HOH HOH 451 A HOH 109 2 HOH HOH 452 A HOH 35 2 HOH HOH 453 A HOH 56 2 HOH HOH 454 A HOH 48 2 HOH HOH 455 A HOH 95 2 HOH HOH 456 A HOH 110 2 HOH HOH 457 A HOH 58 2 HOH HOH 458 A HOH 120 2 HOH HOH 459 A HOH 140 2 HOH HOH 460 A HOH 26 2 HOH HOH 461 A HOH 16 2 HOH HOH 462 A HOH 79 2 HOH HOH 463 A HOH 53 2 HOH HOH 464 A HOH 11 2 HOH HOH 465 A HOH 14 2 HOH HOH 466 A HOH 2 2 HOH HOH 467 A HOH 34 2 HOH HOH 468 A HOH 21 2 HOH HOH 469 A HOH 51 2 HOH HOH 470 A HOH 136 2 HOH HOH 471 A HOH 125 2 HOH HOH 472 A HOH 133 2 HOH HOH 473 A HOH 118 2 HOH HOH 474 A HOH 19 2 HOH HOH 475 A HOH 71 2 HOH HOH 476 A HOH 43 2 HOH HOH 477 A HOH 46 2 HOH HOH 478 A HOH 84 2 HOH HOH 479 A HOH 107 2 HOH HOH 480 A HOH 60 2 HOH HOH 481 A HOH 135 2 HOH HOH 482 A HOH 99 2 HOH HOH 483 A HOH 38 2 HOH HOH 484 A HOH 146 2 HOH HOH 485 A HOH 103 2 HOH HOH 486 A HOH 63 2 HOH HOH 487 A HOH 33 2 HOH HOH 488 A HOH 7 2 HOH HOH 489 A HOH 29 2 HOH HOH 490 A HOH 69 2 HOH HOH 491 A HOH 39 2 HOH HOH 492 A HOH 72 2 HOH HOH 493 A HOH 57 2 HOH HOH 494 A HOH 86 2 HOH HOH 495 A HOH 158 2 HOH HOH 496 A HOH 61 2 HOH HOH 497 A HOH 80 2 HOH HOH 498 A HOH 128 2 HOH HOH 499 A HOH 144 2 HOH HOH 500 A HOH 131 2 HOH HOH 501 A HOH 82 2 HOH HOH 502 A HOH 42 2 HOH HOH 503 A HOH 12 2 HOH HOH 504 A HOH 81 2 HOH HOH 505 A HOH 122 2 HOH HOH 506 A HOH 105 2 HOH HOH 507 A HOH 70 2 HOH HOH 508 A HOH 66 2 HOH HOH 509 A HOH 156 2 HOH HOH 510 A HOH 126 2 HOH HOH 511 A HOH 85 2 HOH HOH 512 A HOH 142 2 HOH HOH 513 A HOH 138 2 HOH HOH 514 A HOH 32 2 HOH HOH 515 A HOH 88 2 HOH HOH 516 A HOH 90 2 HOH HOH 517 A HOH 92 2 HOH HOH 518 A HOH 62 2 HOH HOH 519 A HOH 113 2 HOH HOH 520 A HOH 65 2 HOH HOH 521 A HOH 121 2 HOH HOH 522 A HOH 40 2 HOH HOH 523 A HOH 112 2 HOH HOH 524 A HOH 31 2 HOH HOH 525 A HOH 111 2 HOH HOH 526 A HOH 94 2 HOH HOH 527 A HOH 119 2 HOH HOH 528 A HOH 159 2 HOH HOH 529 A HOH 45 2 HOH HOH 530 A HOH 93 2 HOH HOH 531 A HOH 137 2 HOH HOH 532 A HOH 20 2 HOH HOH 533 A HOH 102 2 HOH HOH 534 A HOH 37 2 HOH HOH 535 A HOH 127 2 HOH HOH 536 A HOH 155 2 HOH HOH 537 A HOH 100 2 HOH HOH 538 A HOH 154 2 HOH HOH 539 A HOH 91 2 HOH HOH 540 A HOH 108 2 HOH HOH 541 A HOH 157 2 HOH HOH 542 A HOH 97 2 HOH HOH 543 A HOH 64 2 HOH HOH 544 A HOH 143 2 HOH HOH 545 A HOH 106 2 HOH HOH 546 A HOH 104 2 HOH HOH 547 A HOH 148 2 HOH HOH 548 A HOH 68 2 HOH HOH 549 A HOH 129 2 HOH HOH 550 A HOH 149 2 HOH HOH 551 A HOH 130 2 HOH HOH 552 A 4.000 36.480 Phaser MODE: MR_AUTO SER 1 n 1 SER 1 A THR 2 n 2 THR 2 A GLY 3 n 3 GLY 3 A SER 4 n 4 SER 4 A ALA 5 n 5 ALA 5 A THR 6 n 6 THR 6 A THR 7 n 7 THR 7 A THR 8 n 8 THR 8 A PRO 9 n 9 PRO 9 A ILE 10 n 10 ILE 10 A ASP 11 n 11 ASP 11 A SER 12 n 12 SER 12 A LEU 13 n 13 LEU 13 A ASP 14 n 14 ASP 14 A ASP 15 n 15 ASP 15 A ALA 16 n 16 ALA 16 A TYR 17 n 17 TYR 17 A ILE 18 n 18 ILE 18 A THR 19 n 19 THR 19 A PRO 20 n 20 PRO 20 A VAL 21 n 21 VAL 21 A GLN 22 n 22 GLN 22 A ILE 23 n 23 ILE 23 A GLY 24 n 24 GLY 24 A THR 25 n 25 THR 25 A PRO 26 n 26 PRO 26 A ALA 27 n 27 ALA 27 A GLN 28 n 28 GLN 28 A THR 29 n 29 THR 29 A LEU 30 n 30 LEU 30 A ASN 31 n 31 ASN 31 A LEU 32 n 32 LEU 32 A ASP 33 n 33 ASP 33 A PHE 34 n 34 PHE 34 A ASP 35 n 35 ASP 35 A THR 36 n 36 THR 36 A GLY 37 n 37 GLY 37 A SER 38 n 38 SER 38 A SER 39 n 39 SER 39 A ASP 40 n 40 ASP 40 A LEU 41 n 41 LEU 41 A TRP 42 n 42 TRP 42 A VAL 43 n 43 VAL 43 A PHE 44 n 44 PHE 44 A SER 45 n 45 SER 45 A SER 46 n 46 SER 46 A GLU 47 n 47 GLU 47 A THR 48 n 48 THR 48 A THR 49 n 49 THR 49 A ALA 50 n 50 ALA 50 A SER 51 n 51 SER 51 A GLU 52 n 52 GLU 52 A VAL 53 n 53 VAL 53 A ASP 54 n 54 ASP 54 A GLY 55 n 55 GLY 55 A GLN 56 n 56 GLN 56 A THR 57 n 57 THR 57 A ILE 58 n 58 ILE 58 A TYR 59 n 59 TYR 59 A THR 60 n 60 THR 60 A PRO 61 n 61 PRO 61 A SER 62 n 62 SER 62 A LYS 63 n 63 LYS 63 A SER 64 n 64 SER 64 A THR 65 n 65 THR 65 A THR 66 n 66 THR 66 A ALA 67 n 67 ALA 67 A LYS 68 n 68 LYS 68 A LEU 69 n 69 LEU 69 A LEU 70 n 70 LEU 70 A SER 71 n 71 SER 71 A GLY 72 n 72 GLY 72 A ALA 73 n 73 ALA 73 A THR 74 n 74 THR 74 A TRP 75 n 75 TRP 75 A SER 76 n 76 SER 76 A ILE 77 n 77 ILE 77 A SER 78 n 78 SER 78 A TYR 79 n 79 TYR 79 A GLY 80 n 80 GLY 80 A ASP 81 n 81 ASP 81 A GLY 82 n 82 GLY 82 A SER 83 n 83 SER 83 A SER 84 n 84 SER 84 A SER 85 n 85 SER 85 A SER 86 n 86 SER 86 A GLY 87 n 87 GLY 87 A ASP 88 n 88 ASP 88 A VAL 89 n 89 VAL 89 A TYR 90 n 90 TYR 90 A THR 91 n 91 THR 91 A ASP 92 n 92 ASP 92 A THR 93 n 93 THR 93 A VAL 94 n 94 VAL 94 A SER 95 n 95 SER 95 A VAL 96 n 96 VAL 96 A GLY 97 n 97 GLY 97 A GLY 98 n 98 GLY 98 A LEU 99 n 99 LEU 99 A THR 100 n 100 THR 100 A VAL 101 n 101 VAL 101 A THR 102 n 102 THR 102 A GLY 103 n 103 GLY 103 A GLN 104 n 104 GLN 104 A ALA 105 n 105 ALA 105 A VAL 106 n 106 VAL 106 A GLU 107 n 107 GLU 107 A SER 108 n 108 SER 108 A ALA 109 n 109 ALA 109 A LYS 110 n 110 LYS 110 A LYS 111 n 111 LYS 111 A VAL 112 n 112 VAL 112 A SER 113 n 113 SER 113 A SER 114 n 114 SER 114 A SER 115 n 115 SER 115 A PHE 116 n 116 PHE 116 A THR 117 n 117 THR 117 A GLU 118 n 118 GLU 118 A ASP 119 n 119 ASP 119 A SER 120 n 120 SER 120 A THR 121 n 121 THR 121 A ILE 122 n 122 ILE 122 A ASP 123 n 123 ASP 123 A GLY 124 n 124 GLY 124 A LEU 125 n 125 LEU 125 A LEU 126 n 126 LEU 126 A GLY 127 n 127 GLY 127 A LEU 128 n 128 LEU 128 A ALA 129 n 129 ALA 129 A PHE 130 n 130 PHE 130 A SER 131 n 131 SER 131 A THR 132 n 132 THR 132 A LEU 133 n 133 LEU 133 A ASN 134 n 134 ASN 134 A THR 135 n 135 THR 135 A VAL 136 n 136 VAL 136 A SER 137 n 137 SER 137 A PRO 138 n 138 PRO 138 A THR 139 n 139 THR 139 A GLN 140 n 140 GLN 140 A GLN 141 n 141 GLN 141 A LYS 142 n 142 LYS 142 A THR 143 n 143 THR 143 A PHE 144 n 144 PHE 144 A PHE 145 n 145 PHE 145 A ASP 146 n 146 ASP 146 A ASN 147 n 147 ASN 147 A ALA 148 n 148 ALA 148 A LYS 149 n 149 LYS 149 A ALA 150 n 150 ALA 150 A SER 151 n 151 SER 151 A LEU 152 n 152 LEU 152 A ASP 153 n 153 ASP 153 A SER 154 n 154 SER 154 A PRO 155 n 155 PRO 155 A VAL 156 n 156 VAL 156 A PHE 157 n 157 PHE 157 A THR 158 n 158 THR 158 A ALA 159 n 159 ALA 159 A ASP 160 n 160 ASP 160 A LEU 161 n 161 LEU 161 A GLY 162 n 162 GLY 162 A TYR 163 n 163 TYR 163 A HIS 164 n 164 HIS 164 A ALA 165 n 165 ALA 165 A PRO 166 n 166 PRO 166 A GLY 167 n 167 GLY 167 A THR 168 n 168 THR 168 A TYR 169 n 169 TYR 169 A ASN 170 n 170 ASN 170 A PHE 171 n 171 PHE 171 A GLY 172 n 172 GLY 172 A PHE 173 n 173 PHE 173 A ILE 174 n 174 ILE 174 A ASP 175 n 175 ASP 175 A THR 176 n 176 THR 176 A THR 177 n 177 THR 177 A ALA 178 n 178 ALA 178 A TYR 179 n 179 TYR 179 A THR 180 n 180 THR 180 A GLY 181 n 181 GLY 181 A SER 182 n 182 SER 182 A ILE 183 n 183 ILE 183 A THR 184 n 184 THR 184 A TYR 185 n 185 TYR 185 A THR 186 n 186 THR 186 A ALA 187 n 187 ALA 187 A VAL 188 n 188 VAL 188 A SER 189 n 189 SER 189 A THR 190 n 190 THR 190 A LYS 191 n 191 LYS 191 A GLN 192 n 192 GLN 192 A GLY 193 n 193 GLY 193 A PHE 194 n 194 PHE 194 A TRP 195 n 195 TRP 195 A GLU 196 n 196 GLU 196 A TRP 197 n 197 TRP 197 A THR 198 n 198 THR 198 A SER 199 n 199 SER 199 A THR 200 n 200 THR 200 A GLY 201 n 201 GLY 201 A TYR 202 n 202 TYR 202 A ALA 203 n 203 ALA 203 A VAL 204 n 204 VAL 204 A GLY 205 n 205 GLY 205 A SER 206 n 206 SER 206 A GLY 207 n 207 GLY 207 A THR 208 n 208 THR 208 A PHE 209 n 209 PHE 209 A LYS 210 n 210 LYS 210 A SER 211 n 211 SER 211 A THR 212 n 212 THR 212 A SER 213 n 213 SER 213 A ILE 214 n 214 ILE 214 A ASP 215 n 215 ASP 215 A GLY 216 n 216 GLY 216 A ILE 217 n 217 ILE 217 A ALA 218 n 218 ALA 218 A ASP 219 n 219 ASP 219 A THR 220 n 220 THR 220 A GLY 221 n 221 GLY 221 A THR 222 n 222 THR 222 A THR 223 n 223 THR 223 A LEU 224 n 224 LEU 224 A LEU 225 n 225 LEU 225 A TYR 226 n 226 TYR 226 A LEU 227 n 227 LEU 227 A PRO 228 n 228 PRO 228 A ALA 229 n 229 ALA 229 A THR 230 n 230 THR 230 A VAL 231 n 231 VAL 231 A VAL 232 n 232 VAL 232 A SER 233 n 233 SER 233 A ALA 234 n 234 ALA 234 A TYR 235 n 235 TYR 235 A TRP 236 n 236 TRP 236 A ALA 237 n 237 ALA 237 A GLN 238 n 238 GLN 238 A VAL 239 n 239 VAL 239 A SER 240 n 240 SER 240 A GLY 241 n 241 GLY 241 A ALA 242 n 242 ALA 242 A LYS 243 n 243 LYS 243 A SER 244 n 244 SER 244 A SER 245 n 245 SER 245 A SER 246 n 246 SER 246 A SER 247 n 247 SER 247 A VAL 248 n 248 VAL 248 A GLY 249 n 249 GLY 249 A GLY 250 n 250 GLY 250 A TYR 251 n 251 TYR 251 A VAL 252 n 252 VAL 252 A PHE 253 n 253 PHE 253 A PRO 254 n 254 PRO 254 A CYS 255 n 255 CYS 255 A SER 256 n 256 SER 256 A ALA 257 n 257 ALA 257 A THR 258 n 258 THR 258 A LEU 259 n 259 LEU 259 A PRO 260 n 260 PRO 260 A SER 261 n 261 SER 261 A PHE 262 n 262 PHE 262 A THR 263 n 263 THR 263 A PHE 264 n 264 PHE 264 A GLY 265 n 265 GLY 265 A VAL 266 n 266 VAL 266 A GLY 267 n 267 GLY 267 A SER 268 n 268 SER 268 A ALA 269 n 269 ALA 269 A ARG 270 n 270 ARG 270 A ILE 271 n 271 ILE 271 A VAL 272 n 272 VAL 272 A ILE 273 n 273 ILE 273 A PRO 274 n 274 PRO 274 A GLY 275 n 275 GLY 275 A ASP 276 n 276 ASP 276 A TYR 277 n 277 TYR 277 A ILE 278 n 278 ILE 278 A ASP 279 n 279 ASP 279 A PHE 280 n 280 PHE 280 A GLY 281 n 281 GLY 281 A PRO 282 n 282 PRO 282 A ILE 283 n 283 ILE 283 A SER 284 n 284 SER 284 A THR 285 n 285 THR 285 A GLY 286 n 286 GLY 286 A SER 287 n 287 SER 287 A SER 288 n 288 SER 288 A SER 289 n 289 SER 289 A CYS 290 n 290 CYS 290 A PHE 291 n 291 PHE 291 A GLY 292 n 292 GLY 292 A GLY 293 n 293 GLY 293 A ILE 294 n 294 ILE 294 A GLN 295 n 295 GLN 295 A SER 296 n 296 SER 296 A SER 297 n 297 SER 297 A ALA 298 n 298 ALA 298 A GLY 299 n 299 GLY 299 A ILE 300 n 300 ILE 300 A GLY 301 n 301 GLY 301 A ILE 302 n 302 ILE 302 A ASN 303 n 303 ASN 303 A ILE 304 n 304 ILE 304 A PHE 305 n 305 PHE 305 A GLY 306 n 306 GLY 306 A ASP 307 n 307 ASP 307 A VAL 308 n 308 VAL 308 A ALA 309 n 309 ALA 309 A LEU 310 n 310 LEU 310 A LYS 311 n 311 LYS 311 A ALA 312 n 312 ALA 312 A ALA 313 n 313 ALA 313 A PHE 314 n 314 PHE 314 A VAL 315 n 315 VAL 315 A VAL 316 n 316 VAL 316 A PHE 317 n 317 PHE 317 A ASN 318 n 318 ASN 318 A GLY 319 n 319 GLY 319 A ALA 320 n 320 ALA 320 A THR 321 n 321 THR 321 A THR 322 n 322 THR 322 A PRO 323 n 323 PRO 323 A THR 324 n 324 THR 324 A LEU 325 n 325 LEU 325 A GLY 326 n 326 GLY 326 A PHE 327 n 327 PHE 327 A ALA 328 n 328 ALA 328 A SER 329 n 329 SER 329 A LYS 330 n 330 LYS 330 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 70 A N LEU 70 A O VAL 89 A O VAL 89 A O SER 95 A O SER 95 A N GLN 22 A N GLN 22 A O ILE 18 A O ILE 18 A N THR 8 A N THR 8 A N THR 7 A N THR 7 A O GLY 167 A O GLY 167 A O ASN 170 A O ASN 170 A N THR 158 A N THR 158 A N PHE 157 A N PHE 157 A O PHE 317 A O PHE 317 A N VAL 316 A N VAL 316 A O GLY 326 A O GLY 326 A O LEU 325 A O LEU 325 A N THR 186 A N THR 186 A N LEU 70 A N LEU 70 A O VAL 89 A O VAL 89 A N TYR 90 A N TYR 90 A O VAL 106 A O VAL 106 A O GLU 107 A O GLU 107 A N LEU 41 A N LEU 41 A N TRP 42 A N TRP 42 A O LEU 125 A O LEU 125 A O GLY 124 A O GLY 124 A N ASP 33 A N ASP 33 A O GLN 28 A O GLN 28 A N ILE 23 A N ILE 23 A O ILE 18 A O ILE 18 A N THR 8 A N THR 8 A N THR 7 A N THR 7 A O GLY 167 A O GLY 167 A O ASN 170 A O ASN 170 A N THR 158 A N THR 158 A N PHE 157 A N PHE 157 A O PHE 317 A O PHE 317 A N VAL 316 A N VAL 316 A O GLY 326 A O GLY 326 A O LEU 325 A O LEU 325 A N THR 186 A N THR 186 A O ILE 273 A O ILE 273 A N PHE 262 A N PHE 262 A O THR 263 A O THR 263 A N ALA 203 A N ALA 203 A N TYR 202 A N TYR 202 A O LYS 210 A O LYS 210 A N ILE 217 A N ILE 217 A O PHE 305 A O PHE 305 A O ILE 304 A O ILE 304 A N TYR 226 A N TYR 226 A N LEU 225 A N LEU 225 A O GLN 295 A O GLN 295 A N LYS 243 A N LYS 243 A O VAL 252 A O VAL 252 A N PHE 253 A N PHE 253 A O CYS 290 A O CYS 290 A O PHE 291 A O PHE 291 A N GLY 281 A N GLY 281 1 A CE LYS 63 A CE LYS 63 1 Y 1 A NZ LYS 63 A NZ LYS 63 1 Y 1 A CD LYS 68 A CD LYS 68 1 Y 1 A CE LYS 68 A CE LYS 68 1 Y 1 A NZ LYS 68 A NZ LYS 68 1 Y 1 A CE LYS 110 A CE LYS 110 1 Y 1 A NZ LYS 110 A NZ LYS 110 1 Y 1 A CD LYS 111 A CD LYS 111 1 Y 1 A CE LYS 111 A CE LYS 111 1 Y 1 A NZ LYS 111 A NZ LYS 111 1 Y 1 A CE LYS 142 A CE LYS 142 1 Y 1 A NZ LYS 142 A NZ LYS 142 1 Y 1 A CE LYS 149 A CE LYS 149 1 Y 1 A NZ LYS 149 A NZ LYS 149 1 Y 1 A CG LYS 191 A CG LYS 191 1 Y 1 A CD LYS 191 A CD LYS 191 1 Y 1 A CE LYS 191 A CE LYS 191 1 Y 1 A NZ LYS 191 A NZ LYS 191 1 Y 1 A CE LYS 243 A CE LYS 243 1 Y 1 A NZ LYS 243 A NZ LYS 243 1 Y 1 A ALA 129 -78.85 -168.05 45.350 15.4863 7.280 All 364 structures of this series were generated by an automated refinement pipeline and, thus, not refined to full convergence (e.g. since no manual (re-)building was performed, fragments are missing in the structural model even when present as indicated by the electron density) 0.1968 0.1579 0.1598 1.6030 36.4800 2042 38775 40817 5.0000 97.1000 0.2200 RANDOM 1 THROUGHOUT 1.350 MOLECULAR REPLACEMENT 21.8100 0.9000 1.1100 4Y5L ML FLAT BULK SOLVENT MODEL 1.6030 36.4800 152 2521 21.10 0 0 2369 330 0.009 2426 1.165 3329 0.050 399 0.006 424 10.967 783 0.5654 0.5800 1.6404 90 1674 1764 15 63.0000 0.2429 0.2869 1.6815 136 2603 2739 15 98.0000 0.2756 0.1938 1.7269 139 2640 2779 15 100.0000 0.2523 0.1537 1.7777 140 2655 2795 15 100.0000 0.2002 0.1370 1.8351 138 2628 2766 15 100.0000 0.1909 0.1277 1.9007 140 2657 2797 15 100.0000 0.1588 0.1123 1.9768 138 2626 2764 15 100.0000 0.1517 0.1144 2.0668 141 2659 2800 15 100.0000 0.1546 0.1105 2.1757 139 2656 2795 15 100.0000 0.1888 0.1204 2.3120 140 2662 2802 15 100.0000 0.1917 0.1298 2.4905 141 2676 2817 15 100.0000 0.1867 0.1425 2.7410 140 2636 2776 15 100.0000 0.1899 0.1511 3.1375 140 2672 2812 15 100.0000 0.1959 0.1574 3.9522 141 2676 2817 15 100.0000 0.1725 0.1642 36.4894 139 2655 2794 15 97.0000 10.220 1.600 42.484 5P05 40865 -3.000 0.998 0.067 0.077 0.912 1 17.330 165901 4.059 97.100 0.632 1.600 1.700 3.100 19146 6769 5688 0.876 0.745 1 0 84.000 0.407 1.700 1.820 4.350 26510 6376 6352 0.897 0.468 1 0 99.600 0.192 1.820 1.960 8.640 24771 5953 5934 0.970 0.221 1 0 99.700 0.104 1.960 2.150 14.000 22832 5457 5439 0.990 0.119 1 0 99.700 0.074 2.150 2.400 18.480 20688 4934 4926 0.995 0.085 1 0 99.800 0.053 2.400 2.770 24.130 18337 4374 4361 0.997 0.060 1 0 99.700 0.034 2.770 3.390 34.340 15435 3697 3688 0.999 0.039 1 0 99.800 0.025 3.390 4.780 47.340 11877 2900 2888 0.999 0.029 1 0 99.600 0.023 4.780 47.740 6305 1640 1589 0.999 0.026 1 0 96.900 data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/XDS.html XDS package refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package phasing Randy J. Read cimr-phaser@lists.cam.ac.uk Tue Apr 7 01:51:31 2015 (svn revision: 6786) http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program 2.5.7 data extraction PDB deposit@deposit.rcsb.org June. 20, 2015 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.20 data reduction Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/XDS.html XDS package All 364 structures of this series were generated by an automated refinement pipeline and, thus, not refined to full convergence (e.g. since no manual (re-)building was performed, fragments are missing in the structural model even when present as indicated by the electron density) Automated refinement of diffraction data obtained from an endothiapepsin crystal treated with fragment 52 1 N N 2 N N A THR 49 A THR 49 HELX_P A VAL 53 A VAL 53 5 AA1 5 A THR 60 A THR 60 HELX_P A SER 64 A SER 64 5 AA2 5 A SER 113 A SER 113 HELX_P A GLU 118 A GLU 118 1 AA3 6 A PHE 130 A PHE 130 HELX_P A ASN 134 A ASN 134 5 AA4 5 A THR 143 A THR 143 HELX_P A LYS 149 A LYS 149 1 AA5 7 A ALA 150 A ALA 150 HELX_P A LEU 152 A LEU 152 5 AA6 3 A PRO 228 A PRO 228 HELX_P A ALA 237 A ALA 237 1 AA7 10 A PRO 274 A PRO 274 HELX_P A TYR 277 A TYR 277 5 AA8 4 A GLY 306 A GLY 306 HELX_P A LYS 311 A LYS 311 1 AA9 6 disulf 2.046 A CYS 255 A SG CYS 255 1_555 A CYS 290 A SG CYS 290 1_555 HYDROLASE fragment screening, method development, aspartic protease, HYDROLASE A THR 25 A THR 25 1 A PRO 26 A PRO 26 -7.80 A SER 137 A SER 137 1 A PRO 138 A PRO 138 5.82 CARP_CRYPA UNP 1 90 P11838 STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLSGATWSISYG DGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTAD LGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS GAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGA TTPTLGFASK 90 419 5OYQ 1 330 P11838 A 1 1 330 9 13 7 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A LYS 68 A LYS 68 A SER 78 A SER 78 A SER 84 A SER 84 A VAL 96 A VAL 96 A TYR 17 A TYR 17 A ILE 23 A ILE 23 A GLY 3 A GLY 3 A PRO 9 A PRO 9 A GLY 167 A GLY 167 A PHE 171 A PHE 171 A VAL 156 A VAL 156 A ASP 160 A ASP 160 A PHE 314 A PHE 314 A ASN 318 A ASN 318 A THR 324 A THR 324 A ALA 328 A ALA 328 A THR 184 A THR 184 A ALA 187 A ALA 187 A LYS 68 A LYS 68 A SER 78 A SER 78 A SER 84 A SER 84 A VAL 96 A VAL 96 A LEU 99 A LEU 99 A VAL 112 A VAL 112 A LEU 41 A LEU 41 A VAL 43 A VAL 43 A GLY 124 A GLY 124 A GLY 127 A GLY 127 A GLN 28 A GLN 28 A ASP 35 A ASP 35 A TYR 17 A TYR 17 A ILE 23 A ILE 23 A GLY 3 A GLY 3 A PRO 9 A PRO 9 A GLY 167 A GLY 167 A PHE 171 A PHE 171 A VAL 156 A VAL 156 A ASP 160 A ASP 160 A PHE 314 A PHE 314 A ASN 318 A ASN 318 A THR 324 A THR 324 A ALA 328 A ALA 328 A THR 184 A THR 184 A ALA 187 A ALA 187 A ALA 269 A ALA 269 A ILE 273 A ILE 273 A PHE 262 A PHE 262 A VAL 266 A VAL 266 A GLU 196 A GLU 196 A VAL 204 A VAL 204 A LYS 210 A LYS 210 A ALA 218 A ALA 218 A ASN 303 A ASN 303 A PHE 305 A PHE 305 A LEU 225 A LEU 225 A LEU 227 A LEU 227 A ILE 294 A ILE 294 A SER 296 A SER 296 A LYS 243 A LYS 243 A SER 245 A SER 245 A GLY 250 A GLY 250 A PRO 254 A PRO 254 A SER 289 A SER 289 A GLY 292 A GLY 292 A ASP 279 A ASP 279 A PRO 282 A PRO 282 4 P 1 21 1