0.013998
0.000000
0.000000
-0.000000
0.013998
0.000000
0.000000
-0.000000
0.006652
0.000000
0.000000
0.000000
Pearce, N.M.
Krojer, T.
Talon, R.
Bradley, A.R.
Fairhead, M.
Sethi, R.
Wright, N.
MacLean, E.
Collins, P.
Brandao-Neto, J.
Douangamath, A.
Renjie, Z.
Dias, A.
Vollmar, M.
Ng, J.
Szykowska, A.
Burgess-Brown, N.
Brennan, P.E.
Cox, O.
Oppermann, U.
Bountra, C.
Arrowsmith, C.H.
Edwards, A.
von Delft, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
71.437
71.437
150.340
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
Ni 2
58.693
NICKEL (II) ION
non-polymer
C4 H5 N O5
147.086
N-OXALYLGLYCINE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
MG
N
261
N
NI
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
O
N
268
N
O
N
269
N
O
N
270
N
N
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
N
288
N
O
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
N
322
N
O
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
S
N
332
N
O
N
333
N
O
N
334
N
O
N
335
N
O
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
R
C
N
341
N
O
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
N
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
N
N
381
S
C
N
382
N
C
N
383
N
O
N
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
N
391
N
O
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
N
N
405
S
C
N
406
N
C
N
407
N
O
N
408
N
C
N
409
N
C
N
410
N
C
N
411
N
O
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
Y
271
N
doub
Y
272
N
sing
Y
273
N
sing
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
doub
N
278
N
sing
Y
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
Y
344
N
doub
Y
345
N
sing
Y
346
N
sing
N
347
N
sing
Y
348
N
doub
Y
349
N
sing
Y
350
N
sing
N
351
N
sing
Y
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
doub
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
UK
Nat Commun
2041-1723
8
15123
15123
10.1038/ncomms15123
28436492
A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density.
2017
10.2210/pdb5pjo/pdb
pdb_00005pjo
100
1
PIXEL
2012-12-15
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
x-ray
1
0.97630
1.0
I03
Diamond
0.97630
SYNCHROTRON
DIAMOND BEAMLINE I03
42050.539
Lysine-specific demethylase 4D
1
man
polymer
65.409
ZINC ION
1
syn
non-polymer
58.693
NICKEL (II) ION
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
147.086
N-OXALYLGLYCINE
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
8
syn
non-polymer
96.063
SULFATE ION
3
syn
non-polymer
18.015
water
441
nat
water
JmjC domain-containing histone demethylation protein 3D,Jumonji domain-containing protein 2D
no
no
MHHHHHHSSGVDLGTENLYFQSMETMKSKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWK
ARETYDNISEILIATPLQQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFEDLERKYWKNRIYNSPIYGA
DISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPE
HGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATP
RWIDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQDR
MHHHHHHSSGVDLGTENLYFQSMETMKSKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWK
ARETYDNISEILIATPLQQVASGRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFEDLERKYWKNRIYNSPIYGA
DISGSLFDENTKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPE
HGQRLERLARELFPGSSRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATP
RWIDYGKMASQCSCGEARVTFSMDAFVRILQPERYDLWKRGQDR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
364
KDM4D, JHDM3D, JMJD2D
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
2.28
46.07
0.100
VAPOR DIFFUSION, SITTING DROP
7
28% PEG3350 -- 0.1M HEPES pH 7.0 -- 0.25M ammonium sulfate
298
citation
citation_author
diffrn_source
pdbx_deposit_group
pdbx_unobs_or_zero_occ_atoms
pdbx_deposit_group
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
repository
Initial release
Advisory
Data collection
Database references
Structure summary
Structure summary
Advisory
Data collection
Database references
Derived calculations
1
0
2017-03-15
1
1
2017-09-27
1
2
2017-10-04
1
3
2024-03-06
_citation.country
_citation.journal_abbrev
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_citation_author.name
_diffrn_source.pdbx_synchrotron_site
_pdbx_deposit_group.group_title
_pdbx_deposit_group.group_type
_pdbx_deposit_group.group_title
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_symmetry
RCSB
Y
RCSB
2017-02-07
REL
REL
Jmjc domain of human JMJD2D screened against the ZENOBIA Fragment Library by X-ray Crystallography. Check out the
PanDDA event maps at https://zenodo.org/record/290220/files/0_index.html
PanDDA analysis group deposition of models of ground state datasets
ground state
ZN
ZINC ION
NI
NICKEL (II) ION
MG
MAGNESIUM ION
OGA
N-OXALYLGLYCINE
EDO
1,2-ETHANEDIOL
SO4
SULFATE ION
HOH
water
ZN
1
2
ZN
ZN
401
A
NI
2
3
NI
NI
402
A
MG
3
4
MG
MG
403
A
OGA
1
5
OGA
OGA
404
A
EDO
2
6
EDO
EDO
405
A
EDO
3
6
EDO
EDO
406
A
EDO
4
6
EDO
EDO
407
A
EDO
5
6
EDO
EDO
408
A
EDO
6
6
EDO
EDO
409
A
EDO
7
6
EDO
EDO
410
A
EDO
8
6
EDO
EDO
411
A
EDO
9
6
EDO
EDO
412
A
SO4
1
7
SO4
SO4
413
A
SO4
2
7
SO4
SO4
414
A
SO4
3
7
SO4
SO4
415
A
HOH
260
8
HOH
HOH
501
A
HOH
384
8
HOH
HOH
502
A
HOH
208
8
HOH
HOH
503
A
HOH
90
8
HOH
HOH
504
A
HOH
272
8
HOH
HOH
505
A
HOH
369
8
HOH
HOH
506
A
HOH
266
8
HOH
HOH
507
A
HOH
245
8
HOH
HOH
508
A
HOH
273
8
HOH
HOH
509
A
HOH
339
8
HOH
HOH
510
A
HOH
209
8
HOH
HOH
511
A
HOH
286
8
HOH
HOH
512
A
HOH
248
8
HOH
HOH
513
A
HOH
223
8
HOH
HOH
514
A
HOH
210
8
HOH
HOH
515
A
HOH
302
8
HOH
HOH
516
A
HOH
337
8
HOH
HOH
517
A
HOH
56
8
HOH
HOH
518
A
HOH
338
8
HOH
HOH
519
A
HOH
136
8
HOH
HOH
520
A
HOH
396
8
HOH
HOH
521
A
HOH
443
8
HOH
HOH
522
A
HOH
176
8
HOH
HOH
523
A
HOH
411
8
HOH
HOH
524
A
HOH
80
8
HOH
HOH
525
A
HOH
64
8
HOH
HOH
526
A
HOH
222
8
HOH
HOH
527
A
HOH
420
8
HOH
HOH
528
A
HOH
68
8
HOH
HOH
529
A
HOH
239
8
HOH
HOH
530
A
HOH
161
8
HOH
HOH
531
A
HOH
288
8
HOH
HOH
532
A
HOH
169
8
HOH
HOH
533
A
HOH
187
8
HOH
HOH
534
A
HOH
163
8
HOH
HOH
535
A
HOH
284
8
HOH
HOH
536
A
HOH
151
8
HOH
HOH
537
A
HOH
57
8
HOH
HOH
538
A
HOH
329
8
HOH
HOH
539
A
HOH
66
8
HOH
HOH
540
A
HOH
359
8
HOH
HOH
541
A
HOH
138
8
HOH
HOH
542
A
HOH
244
8
HOH
HOH
543
A
HOH
142
8
HOH
HOH
544
A
HOH
308
8
HOH
HOH
545
A
HOH
341
8
HOH
HOH
546
A
HOH
436
8
HOH
HOH
547
A
HOH
162
8
HOH
HOH
548
A
HOH
227
8
HOH
HOH
549
A
HOH
63
8
HOH
HOH
550
A
HOH
99
8
HOH
HOH
551
A
HOH
280
8
HOH
HOH
552
A
HOH
232
8
HOH
HOH
553
A
HOH
234
8
HOH
HOH
554
A
HOH
139
8
HOH
HOH
555
A
HOH
326
8
HOH
HOH
556
A
HOH
204
8
HOH
HOH
557
A
HOH
346
8
HOH
HOH
558
A
HOH
354
8
HOH
HOH
559
A
HOH
189
8
HOH
HOH
560
A
HOH
376
8
HOH
HOH
561
A
HOH
3
8
HOH
HOH
562
A
HOH
135
8
HOH
HOH
563
A
HOH
13
8
HOH
HOH
564
A
HOH
102
8
HOH
HOH
565
A
HOH
112
8
HOH
HOH
566
A
HOH
267
8
HOH
HOH
567
A
HOH
179
8
HOH
HOH
568
A
HOH
34
8
HOH
HOH
569
A
HOH
23
8
HOH
HOH
570
A
HOH
30
8
HOH
HOH
571
A
HOH
332
8
HOH
HOH
572
A
HOH
143
8
HOH
HOH
573
A
HOH
268
8
HOH
HOH
574
A
HOH
271
8
HOH
HOH
575
A
HOH
395
8
HOH
HOH
576
A
HOH
392
8
HOH
HOH
577
A
HOH
437
8
HOH
HOH
578
A
HOH
350
8
HOH
HOH
579
A
HOH
168
8
HOH
HOH
580
A
HOH
290
8
HOH
HOH
581
A
HOH
86
8
HOH
HOH
582
A
HOH
97
8
HOH
HOH
583
A
HOH
433
8
HOH
HOH
584
A
HOH
382
8
HOH
HOH
585
A
HOH
229
8
HOH
HOH
586
A
HOH
235
8
HOH
HOH
587
A
HOH
158
8
HOH
HOH
588
A
HOH
11
8
HOH
HOH
589
A
HOH
366
8
HOH
HOH
590
A
HOH
219
8
HOH
HOH
591
A
HOH
221
8
HOH
HOH
592
A
HOH
31
8
HOH
HOH
593
A
HOH
10
8
HOH
HOH
594
A
HOH
251
8
HOH
HOH
595
A
HOH
307
8
HOH
HOH
596
A
HOH
206
8
HOH
HOH
597
A
HOH
319
8
HOH
HOH
598
A
HOH
259
8
HOH
HOH
599
A
HOH
39
8
HOH
HOH
600
A
HOH
14
8
HOH
HOH
601
A
HOH
1
8
HOH
HOH
602
A
HOH
9
8
HOH
HOH
603
A
HOH
41
8
HOH
HOH
604
A
HOH
444
8
HOH
HOH
605
A
HOH
107
8
HOH
HOH
606
A
HOH
32
8
HOH
HOH
607
A
HOH
51
8
HOH
HOH
608
A
HOH
108
8
HOH
HOH
609
A
HOH
174
8
HOH
HOH
610
A
HOH
52
8
HOH
HOH
611
A
HOH
358
8
HOH
HOH
612
A
HOH
114
8
HOH
HOH
613
A
HOH
237
8
HOH
HOH
614
A
HOH
89
8
HOH
HOH
615
A
HOH
60
8
HOH
HOH
616
A
HOH
21
8
HOH
HOH
617
A
HOH
254
8
HOH
HOH
618
A
HOH
190
8
HOH
HOH
619
A
HOH
29
8
HOH
HOH
620
A
HOH
54
8
HOH
HOH
621
A
HOH
367
8
HOH
HOH
622
A
HOH
199
8
HOH
HOH
623
A
HOH
228
8
HOH
HOH
624
A
HOH
12
8
HOH
HOH
625
A
HOH
46
8
HOH
HOH
626
A
HOH
16
8
HOH
HOH
627
A
HOH
118
8
HOH
HOH
628
A
HOH
171
8
HOH
HOH
629
A
HOH
240
8
HOH
HOH
630
A
HOH
69
8
HOH
HOH
631
A
HOH
164
8
HOH
HOH
632
A
HOH
111
8
HOH
HOH
633
A
HOH
173
8
HOH
HOH
634
A
HOH
71
8
HOH
HOH
635
A
HOH
215
8
HOH
HOH
636
A
HOH
87
8
HOH
HOH
637
A
HOH
265
8
HOH
HOH
638
A
HOH
4
8
HOH
HOH
639
A
HOH
440
8
HOH
HOH
640
A
HOH
165
8
HOH
HOH
641
A
HOH
213
8
HOH
HOH
642
A
HOH
263
8
HOH
HOH
643
A
HOH
131
8
HOH
HOH
644
A
HOH
78
8
HOH
HOH
645
A
HOH
45
8
HOH
HOH
646
A
HOH
303
8
HOH
HOH
647
A
HOH
126
8
HOH
HOH
648
A
HOH
372
8
HOH
HOH
649
A
HOH
253
8
HOH
HOH
650
A
HOH
390
8
HOH
HOH
651
A
HOH
5
8
HOH
HOH
652
A
HOH
434
8
HOH
HOH
653
A
HOH
247
8
HOH
HOH
654
A
HOH
236
8
HOH
HOH
655
A
HOH
92
8
HOH
HOH
656
A
HOH
147
8
HOH
HOH
657
A
HOH
152
8
HOH
HOH
658
A
HOH
426
8
HOH
HOH
659
A
HOH
145
8
HOH
HOH
660
A
HOH
218
8
HOH
HOH
661
A
HOH
18
8
HOH
HOH
662
A
HOH
62
8
HOH
HOH
663
A
HOH
96
8
HOH
HOH
664
A
HOH
65
8
HOH
HOH
665
A
HOH
17
8
HOH
HOH
666
A
HOH
439
8
HOH
HOH
667
A
HOH
352
8
HOH
HOH
668
A
HOH
122
8
HOH
HOH
669
A
HOH
77
8
HOH
HOH
670
A
HOH
115
8
HOH
HOH
671
A
HOH
160
8
HOH
HOH
672
A
HOH
278
8
HOH
HOH
673
A
HOH
404
8
HOH
HOH
674
A
HOH
224
8
HOH
HOH
675
A
HOH
67
8
HOH
HOH
676
A
HOH
381
8
HOH
HOH
677
A
HOH
19
8
HOH
HOH
678
A
HOH
428
8
HOH
HOH
679
A
HOH
35
8
HOH
HOH
680
A
HOH
72
8
HOH
HOH
681
A
HOH
27
8
HOH
HOH
682
A
HOH
121
8
HOH
HOH
683
A
HOH
414
8
HOH
HOH
684
A
HOH
238
8
HOH
HOH
685
A
HOH
129
8
HOH
HOH
686
A
HOH
409
8
HOH
HOH
687
A
HOH
38
8
HOH
HOH
688
A
HOH
40
8
HOH
HOH
689
A
HOH
140
8
HOH
HOH
690
A
HOH
47
8
HOH
HOH
691
A
HOH
42
8
HOH
HOH
692
A
HOH
22
8
HOH
HOH
693
A
HOH
2
8
HOH
HOH
694
A
HOH
283
8
HOH
HOH
695
A
HOH
442
8
HOH
HOH
696
A
HOH
427
8
HOH
HOH
697
A
HOH
435
8
HOH
HOH
698
A
HOH
201
8
HOH
HOH
699
A
HOH
75
8
HOH
HOH
700
A
HOH
312
8
HOH
HOH
701
A
HOH
44
8
HOH
HOH
702
A
HOH
418
8
HOH
HOH
703
A
HOH
402
8
HOH
HOH
704
A
HOH
74
8
HOH
HOH
705
A
HOH
182
8
HOH
HOH
706
A
HOH
289
8
HOH
HOH
707
A
HOH
58
8
HOH
HOH
708
A
HOH
203
8
HOH
HOH
709
A
HOH
233
8
HOH
HOH
710
A
HOH
24
8
HOH
HOH
711
A
HOH
282
8
HOH
HOH
712
A
HOH
70
8
HOH
HOH
713
A
HOH
127
8
HOH
HOH
714
A
HOH
177
8
HOH
HOH
715
A
HOH
88
8
HOH
HOH
716
A
HOH
28
8
HOH
HOH
717
A
HOH
85
8
HOH
HOH
718
A
HOH
94
8
HOH
HOH
719
A
HOH
15
8
HOH
HOH
720
A
HOH
26
8
HOH
HOH
721
A
HOH
196
8
HOH
HOH
722
A
HOH
109
8
HOH
HOH
723
A
HOH
370
8
HOH
HOH
724
A
HOH
103
8
HOH
HOH
725
A
HOH
104
8
HOH
HOH
726
A
HOH
6
8
HOH
HOH
727
A
HOH
81
8
HOH
HOH
728
A
HOH
242
8
HOH
HOH
729
A
HOH
7
8
HOH
HOH
730
A
HOH
167
8
HOH
HOH
731
A
HOH
79
8
HOH
HOH
732
A
HOH
320
8
HOH
HOH
733
A
HOH
105
8
HOH
HOH
734
A
HOH
73
8
HOH
HOH
735
A
HOH
59
8
HOH
HOH
736
A
HOH
150
8
HOH
HOH
737
A
HOH
113
8
HOH
HOH
738
A
HOH
241
8
HOH
HOH
739
A
HOH
397
8
HOH
HOH
740
A
HOH
61
8
HOH
HOH
741
A
HOH
33
8
HOH
HOH
742
A
HOH
8
8
HOH
HOH
743
A
HOH
348
8
HOH
HOH
744
A
HOH
144
8
HOH
HOH
745
A
HOH
53
8
HOH
HOH
746
A
HOH
309
8
HOH
HOH
747
A
HOH
398
8
HOH
HOH
748
A
HOH
43
8
HOH
HOH
749
A
HOH
281
8
HOH
HOH
750
A
HOH
249
8
HOH
HOH
751
A
HOH
50
8
HOH
HOH
752
A
HOH
214
8
HOH
HOH
753
A
HOH
269
8
HOH
HOH
754
A
HOH
146
8
HOH
HOH
755
A
HOH
36
8
HOH
HOH
756
A
HOH
357
8
HOH
HOH
757
A
HOH
124
8
HOH
HOH
758
A
HOH
264
8
HOH
HOH
759
A
HOH
415
8
HOH
HOH
760
A
HOH
134
8
HOH
HOH
761
A
HOH
101
8
HOH
HOH
762
A
HOH
159
8
HOH
HOH
763
A
HOH
84
8
HOH
HOH
764
A
HOH
355
8
HOH
HOH
765
A
HOH
351
8
HOH
HOH
766
A
HOH
148
8
HOH
HOH
767
A
HOH
292
8
HOH
HOH
768
A
HOH
123
8
HOH
HOH
769
A
HOH
194
8
HOH
HOH
770
A
HOH
275
8
HOH
HOH
771
A
HOH
345
8
HOH
HOH
772
A
HOH
383
8
HOH
HOH
773
A
HOH
82
8
HOH
HOH
774
A
HOH
128
8
HOH
HOH
775
A
HOH
130
8
HOH
HOH
776
A
HOH
180
8
HOH
HOH
777
A
HOH
76
8
HOH
HOH
778
A
HOH
195
8
HOH
HOH
779
A
HOH
91
8
HOH
HOH
780
A
HOH
98
8
HOH
HOH
781
A
HOH
125
8
HOH
HOH
782
A
HOH
393
8
HOH
HOH
783
A
HOH
55
8
HOH
HOH
784
A
HOH
258
8
HOH
HOH
785
A
HOH
399
8
HOH
HOH
786
A
HOH
256
8
HOH
HOH
787
A
HOH
149
8
HOH
HOH
788
A
HOH
324
8
HOH
HOH
789
A
HOH
93
8
HOH
HOH
790
A
HOH
133
8
HOH
HOH
791
A
HOH
291
8
HOH
HOH
792
A
HOH
304
8
HOH
HOH
793
A
HOH
364
8
HOH
HOH
794
A
HOH
191
8
HOH
HOH
795
A
HOH
250
8
HOH
HOH
796
A
HOH
340
8
HOH
HOH
797
A
HOH
246
8
HOH
HOH
798
A
HOH
353
8
HOH
HOH
799
A
HOH
157
8
HOH
HOH
800
A
HOH
389
8
HOH
HOH
801
A
HOH
276
8
HOH
HOH
802
A
HOH
386
8
HOH
HOH
803
A
HOH
211
8
HOH
HOH
804
A
HOH
362
8
HOH
HOH
805
A
HOH
405
8
HOH
HOH
806
A
HOH
20
8
HOH
HOH
807
A
HOH
394
8
HOH
HOH
808
A
HOH
421
8
HOH
HOH
809
A
HOH
333
8
HOH
HOH
810
A
HOH
343
8
HOH
HOH
811
A
HOH
252
8
HOH
HOH
812
A
HOH
297
8
HOH
HOH
813
A
HOH
230
8
HOH
HOH
814
A
HOH
361
8
HOH
HOH
815
A
HOH
400
8
HOH
HOH
816
A
HOH
212
8
HOH
HOH
817
A
HOH
83
8
HOH
HOH
818
A
HOH
413
8
HOH
HOH
819
A
HOH
141
8
HOH
HOH
820
A
HOH
445
8
HOH
HOH
821
A
HOH
347
8
HOH
HOH
822
A
HOH
117
8
HOH
HOH
823
A
HOH
277
8
HOH
HOH
824
A
HOH
300
8
HOH
HOH
825
A
HOH
401
8
HOH
HOH
826
A
HOH
356
8
HOH
HOH
827
A
HOH
132
8
HOH
HOH
828
A
HOH
37
8
HOH
HOH
829
A
HOH
387
8
HOH
HOH
830
A
HOH
306
8
HOH
HOH
831
A
HOH
207
8
HOH
HOH
832
A
HOH
270
8
HOH
HOH
833
A
HOH
116
8
HOH
HOH
834
A
HOH
257
8
HOH
HOH
835
A
HOH
378
8
HOH
HOH
836
A
HOH
170
8
HOH
HOH
837
A
HOH
295
8
HOH
HOH
838
A
HOH
262
8
HOH
HOH
839
A
HOH
137
8
HOH
HOH
840
A
HOH
197
8
HOH
HOH
841
A
HOH
331
8
HOH
HOH
842
A
HOH
335
8
HOH
HOH
843
A
HOH
200
8
HOH
HOH
844
A
HOH
285
8
HOH
HOH
845
A
HOH
100
8
HOH
HOH
846
A
HOH
438
8
HOH
HOH
847
A
HOH
296
8
HOH
HOH
848
A
HOH
365
8
HOH
HOH
849
A
HOH
310
8
HOH
HOH
850
A
HOH
294
8
HOH
HOH
851
A
HOH
226
8
HOH
HOH
852
A
HOH
379
8
HOH
HOH
853
A
HOH
181
8
HOH
HOH
854
A
HOH
330
8
HOH
HOH
855
A
HOH
154
8
HOH
HOH
856
A
HOH
360
8
HOH
HOH
857
A
HOH
185
8
HOH
HOH
858
A
HOH
416
8
HOH
HOH
859
A
HOH
336
8
HOH
HOH
860
A
HOH
422
8
HOH
HOH
861
A
HOH
184
8
HOH
HOH
862
A
HOH
25
8
HOH
HOH
863
A
HOH
388
8
HOH
HOH
864
A
HOH
314
8
HOH
HOH
865
A
HOH
231
8
HOH
HOH
866
A
HOH
188
8
HOH
HOH
867
A
HOH
441
8
HOH
HOH
868
A
HOH
311
8
HOH
HOH
869
A
HOH
315
8
HOH
HOH
870
A
HOH
192
8
HOH
HOH
871
A
HOH
299
8
HOH
HOH
872
A
HOH
327
8
HOH
HOH
873
A
HOH
406
8
HOH
HOH
874
A
HOH
49
8
HOH
HOH
875
A
HOH
368
8
HOH
HOH
876
A
HOH
120
8
HOH
HOH
877
A
HOH
349
8
HOH
HOH
878
A
HOH
298
8
HOH
HOH
879
A
HOH
318
8
HOH
HOH
880
A
HOH
48
8
HOH
HOH
881
A
HOH
178
8
HOH
HOH
882
A
HOH
363
8
HOH
HOH
883
A
HOH
119
8
HOH
HOH
884
A
HOH
432
8
HOH
HOH
885
A
HOH
166
8
HOH
HOH
886
A
HOH
255
8
HOH
HOH
887
A
HOH
373
8
HOH
HOH
888
A
HOH
408
8
HOH
HOH
889
A
HOH
274
8
HOH
HOH
890
A
HOH
403
8
HOH
HOH
891
A
HOH
423
8
HOH
HOH
892
A
HOH
344
8
HOH
HOH
893
A
HOH
243
8
HOH
HOH
894
A
HOH
325
8
HOH
HOH
895
A
HOH
374
8
HOH
HOH
896
A
HOH
220
8
HOH
HOH
897
A
HOH
371
8
HOH
HOH
898
A
HOH
156
8
HOH
HOH
899
A
HOH
412
8
HOH
HOH
900
A
HOH
153
8
HOH
HOH
901
A
HOH
431
8
HOH
HOH
902
A
HOH
430
8
HOH
HOH
903
A
HOH
328
8
HOH
HOH
904
A
HOH
205
8
HOH
HOH
905
A
HOH
424
8
HOH
HOH
906
A
HOH
321
8
HOH
HOH
907
A
HOH
377
8
HOH
HOH
908
A
HOH
279
8
HOH
HOH
909
A
HOH
198
8
HOH
HOH
910
A
HOH
175
8
HOH
HOH
911
A
HOH
391
8
HOH
HOH
912
A
HOH
317
8
HOH
HOH
913
A
HOH
217
8
HOH
HOH
914
A
HOH
313
8
HOH
HOH
915
A
HOH
155
8
HOH
HOH
916
A
HOH
419
8
HOH
HOH
917
A
HOH
380
8
HOH
HOH
918
A
HOH
110
8
HOH
HOH
919
A
HOH
193
8
HOH
HOH
920
A
HOH
202
8
HOH
HOH
921
A
HOH
334
8
HOH
HOH
922
A
HOH
322
8
HOH
HOH
923
A
HOH
301
8
HOH
HOH
924
A
HOH
417
8
HOH
HOH
925
A
HOH
186
8
HOH
HOH
926
A
HOH
293
8
HOH
HOH
927
A
HOH
95
8
HOH
HOH
928
A
HOH
216
8
HOH
HOH
929
A
HOH
183
8
HOH
HOH
930
A
HOH
172
8
HOH
HOH
931
A
HOH
385
8
HOH
HOH
932
A
HOH
305
8
HOH
HOH
933
A
HOH
316
8
HOH
HOH
934
A
HOH
410
8
HOH
HOH
935
A
HOH
225
8
HOH
HOH
936
A
HOH
407
8
HOH
HOH
937
A
HOH
425
8
HOH
HOH
938
A
HOH
342
8
HOH
HOH
939
A
HOH
375
8
HOH
HOH
940
A
HOH
429
8
HOH
HOH
941
A
n
1
-21
A
n
2
-20
A
n
3
-19
A
n
4
-18
A
n
5
-17
A
n
6
-16
A
n
7
-15
A
n
8
-14
A
n
9
-13
A
n
10
-12
A
n
11
-11
A
n
12
-10
A
n
13
-9
A
n
14
-8
A
n
15
-7
A
n
16
-6
A
n
17
-5
A
n
18
-4
A
n
19
-3
A
n
20
-2
A
n
21
-1
A
n
22
0
A
n
23
1
A
n
24
2
A
n
25
3
A
n
26
4
A
n
27
5
A
n
28
6
A
n
29
7
A
n
30
8
A
n
31
9
A
n
32
10
A
ALA
11
n
33
ALA
11
A
GLN
12
n
34
GLN
12
A
ASN
13
n
35
ASN
13
A
PRO
14
n
36
PRO
14
A
ASN
15
n
37
ASN
15
A
CYS
16
n
38
CYS
16
A
ASN
17
n
39
ASN
17
A
ILE
18
n
40
ILE
18
A
MET
19
n
41
MET
19
A
ILE
20
n
42
ILE
20
A
PHE
21
n
43
PHE
21
A
HIS
22
n
44
HIS
22
A
PRO
23
n
45
PRO
23
A
THR
24
n
46
THR
24
A
LYS
25
n
47
LYS
25
A
GLU
26
n
48
GLU
26
A
GLU
27
n
49
GLU
27
A
PHE
28
n
50
PHE
28
A
ASN
29
n
51
ASN
29
A
ASP
30
n
52
ASP
30
A
PHE
31
n
53
PHE
31
A
ASP
32
n
54
ASP
32
A
LYS
33
n
55
LYS
33
A
TYR
34
n
56
TYR
34
A
ILE
35
n
57
ILE
35
A
ALA
36
n
58
ALA
36
A
TYR
37
n
59
TYR
37
A
MET
38
n
60
MET
38
A
GLU
39
n
61
GLU
39
A
SER
40
n
62
SER
40
A
GLN
41
n
63
GLN
41
A
GLY
42
n
64
GLY
42
A
ALA
43
n
65
ALA
43
A
HIS
44
n
66
HIS
44
A
ARG
45
n
67
ARG
45
A
ALA
46
n
68
ALA
46
A
GLY
47
n
69
GLY
47
A
LEU
48
n
70
LEU
48
A
ALA
49
n
71
ALA
49
A
LYS
50
n
72
LYS
50
A
ILE
51
n
73
ILE
51
A
ILE
52
n
74
ILE
52
A
PRO
53
n
75
PRO
53
A
PRO
54
n
76
PRO
54
A
LYS
55
n
77
LYS
55
A
GLU
56
n
78
GLU
56
A
TRP
57
n
79
TRP
57
A
LYS
58
n
80
LYS
58
A
ALA
59
n
81
ALA
59
A
ARG
60
n
82
ARG
60
A
GLU
61
n
83
GLU
61
A
THR
62
n
84
THR
62
A
TYR
63
n
85
TYR
63
A
ASP
64
n
86
ASP
64
A
ASN
65
n
87
ASN
65
A
ILE
66
n
88
ILE
66
A
SER
67
n
89
SER
67
A
GLU
68
n
90
GLU
68
A
ILE
69
n
91
ILE
69
A
LEU
70
n
92
LEU
70
A
ILE
71
n
93
ILE
71
A
ALA
72
n
94
ALA
72
A
THR
73
n
95
THR
73
A
PRO
74
n
96
PRO
74
A
LEU
75
n
97
LEU
75
A
GLN
76
n
98
GLN
76
A
GLN
77
n
99
GLN
77
A
VAL
78
n
100
VAL
78
A
ALA
79
n
101
ALA
79
A
SER
80
n
102
SER
80
A
GLY
81
n
103
GLY
81
A
ARG
82
n
104
ARG
82
A
ALA
83
n
105
ALA
83
A
GLY
84
n
106
GLY
84
A
VAL
85
n
107
VAL
85
A
PHE
86
n
108
PHE
86
A
THR
87
n
109
THR
87
A
GLN
88
n
110
GLN
88
A
TYR
89
n
111
TYR
89
A
HIS
90
n
112
HIS
90
A
LYS
91
n
113
LYS
91
A
LYS
92
n
114
LYS
92
A
LYS
93
n
115
LYS
93
A
LYS
94
n
116
LYS
94
A
ALA
95
n
117
ALA
95
A
MET
96
n
118
MET
96
A
THR
97
n
119
THR
97
A
VAL
98
n
120
VAL
98
A
GLY
99
n
121
GLY
99
A
GLU
100
n
122
GLU
100
A
TYR
101
n
123
TYR
101
A
ARG
102
n
124
ARG
102
A
HIS
103
n
125
HIS
103
A
LEU
104
n
126
LEU
104
A
ALA
105
n
127
ALA
105
A
ASN
106
n
128
ASN
106
A
SER
107
n
129
SER
107
A
LYS
108
n
130
LYS
108
A
LYS
109
n
131
LYS
109
A
TYR
110
n
132
TYR
110
A
GLN
111
n
133
GLN
111
A
THR
112
n
134
THR
112
A
PRO
113
n
135
PRO
113
A
PRO
114
n
136
PRO
114
A
HIS
115
n
137
HIS
115
A
GLN
116
n
138
GLN
116
A
ASN
117
n
139
ASN
117
A
PHE
118
n
140
PHE
118
A
GLU
119
n
141
GLU
119
A
ASP
120
n
142
ASP
120
A
LEU
121
n
143
LEU
121
A
GLU
122
n
144
GLU
122
A
ARG
123
n
145
ARG
123
A
LYS
124
n
146
LYS
124
A
TYR
125
n
147
TYR
125
A
TRP
126
n
148
TRP
126
A
LYS
127
n
149
LYS
127
A
ASN
128
n
150
ASN
128
A
ARG
129
n
151
ARG
129
A
ILE
130
n
152
ILE
130
A
TYR
131
n
153
TYR
131
A
ASN
132
n
154
ASN
132
A
SER
133
n
155
SER
133
A
PRO
134
n
156
PRO
134
A
ILE
135
n
157
ILE
135
A
TYR
136
n
158
TYR
136
A
GLY
137
n
159
GLY
137
A
ALA
138
n
160
ALA
138
A
ASP
139
n
161
ASP
139
A
ILE
140
n
162
ILE
140
A
SER
141
n
163
SER
141
A
GLY
142
n
164
GLY
142
A
SER
143
n
165
SER
143
A
LEU
144
n
166
LEU
144
A
PHE
145
n
167
PHE
145
A
ASP
146
n
168
ASP
146
A
GLU
147
n
169
GLU
147
A
ASN
148
n
170
ASN
148
A
THR
149
n
171
THR
149
A
LYS
150
n
172
LYS
150
A
GLN
151
n
173
GLN
151
A
TRP
152
n
174
TRP
152
A
ASN
153
n
175
ASN
153
A
LEU
154
n
176
LEU
154
A
GLY
155
n
177
GLY
155
A
HIS
156
n
178
HIS
156
A
LEU
157
n
179
LEU
157
A
GLY
158
n
180
GLY
158
A
THR
159
n
181
THR
159
A
ILE
160
n
182
ILE
160
A
GLN
161
n
183
GLN
161
A
ASP
162
n
184
ASP
162
A
LEU
163
n
185
LEU
163
A
LEU
164
n
186
LEU
164
A
GLU
165
n
187
GLU
165
A
LYS
166
n
188
LYS
166
A
GLU
167
n
189
GLU
167
A
CYS
168
n
190
CYS
168
A
GLY
169
n
191
GLY
169
A
VAL
170
n
192
VAL
170
A
VAL
171
n
193
VAL
171
A
ILE
172
n
194
ILE
172
A
GLU
173
n
195
GLU
173
A
GLY
174
n
196
GLY
174
A
VAL
175
n
197
VAL
175
A
ASN
176
n
198
ASN
176
A
THR
177
n
199
THR
177
A
PRO
178
n
200
PRO
178
A
TYR
179
n
201
TYR
179
A
LEU
180
n
202
LEU
180
A
TYR
181
n
203
TYR
181
A
PHE
182
n
204
PHE
182
A
GLY
183
n
205
GLY
183
A
MET
184
n
206
MET
184
A
TRP
185
n
207
TRP
185
A
LYS
186
n
208
LYS
186
A
THR
187
n
209
THR
187
A
THR
188
n
210
THR
188
A
PHE
189
n
211
PHE
189
A
ALA
190
n
212
ALA
190
A
TRP
191
n
213
TRP
191
A
HIS
192
n
214
HIS
192
A
THR
193
n
215
THR
193
A
GLU
194
n
216
GLU
194
A
ASP
195
n
217
ASP
195
A
MET
196
n
218
MET
196
A
ASP
197
n
219
ASP
197
A
LEU
198
n
220
LEU
198
A
TYR
199
n
221
TYR
199
A
SER
200
n
222
SER
200
A
ILE
201
n
223
ILE
201
A
ASN
202
n
224
ASN
202
A
TYR
203
n
225
TYR
203
A
LEU
204
n
226
LEU
204
A
HIS
205
n
227
HIS
205
A
LEU
206
n
228
LEU
206
A
GLY
207
n
229
GLY
207
A
GLU
208
n
230
GLU
208
A
PRO
209
n
231
PRO
209
A
LYS
210
n
232
LYS
210
A
THR
211
n
233
THR
211
A
TRP
212
n
234
TRP
212
A
TYR
213
n
235
TYR
213
A
VAL
214
n
236
VAL
214
A
VAL
215
n
237
VAL
215
A
PRO
216
n
238
PRO
216
A
PRO
217
n
239
PRO
217
A
GLU
218
n
240
GLU
218
A
HIS
219
n
241
HIS
219
A
GLY
220
n
242
GLY
220
A
GLN
221
n
243
GLN
221
A
ARG
222
n
244
ARG
222
A
LEU
223
n
245
LEU
223
A
GLU
224
n
246
GLU
224
A
ARG
225
n
247
ARG
225
A
LEU
226
n
248
LEU
226
A
ALA
227
n
249
ALA
227
A
ARG
228
n
250
ARG
228
A
GLU
229
n
251
GLU
229
A
LEU
230
n
252
LEU
230
A
PHE
231
n
253
PHE
231
A
PRO
232
n
254
PRO
232
A
GLY
233
n
255
GLY
233
A
SER
234
n
256
SER
234
A
SER
235
n
257
SER
235
A
ARG
236
n
258
ARG
236
A
GLY
237
n
259
GLY
237
A
CYS
238
n
260
CYS
238
A
GLY
239
n
261
GLY
239
A
ALA
240
n
262
ALA
240
A
PHE
241
n
263
PHE
241
A
LEU
242
n
264
LEU
242
A
ARG
243
n
265
ARG
243
A
HIS
244
n
266
HIS
244
A
LYS
245
n
267
LYS
245
A
VAL
246
n
268
VAL
246
A
ALA
247
n
269
ALA
247
A
LEU
248
n
270
LEU
248
A
ILE
249
n
271
ILE
249
A
SER
250
n
272
SER
250
A
PRO
251
n
273
PRO
251
A
THR
252
n
274
THR
252
A
VAL
253
n
275
VAL
253
A
LEU
254
n
276
LEU
254
A
LYS
255
n
277
LYS
255
A
GLU
256
n
278
GLU
256
A
ASN
257
n
279
ASN
257
A
GLY
258
n
280
GLY
258
A
ILE
259
n
281
ILE
259
A
PRO
260
n
282
PRO
260
A
PHE
261
n
283
PHE
261
A
ASN
262
n
284
ASN
262
A
ARG
263
n
285
ARG
263
A
ILE
264
n
286
ILE
264
A
THR
265
n
287
THR
265
A
GLN
266
n
288
GLN
266
A
GLU
267
n
289
GLU
267
A
ALA
268
n
290
ALA
268
A
GLY
269
n
291
GLY
269
A
GLU
270
n
292
GLU
270
A
PHE
271
n
293
PHE
271
A
MET
272
n
294
MET
272
A
VAL
273
n
295
VAL
273
A
THR
274
n
296
THR
274
A
PHE
275
n
297
PHE
275
A
PRO
276
n
298
PRO
276
A
TYR
277
n
299
TYR
277
A
GLY
278
n
300
GLY
278
A
TYR
279
n
301
TYR
279
A
HIS
280
n
302
HIS
280
A
ALA
281
n
303
ALA
281
A
GLY
282
n
304
GLY
282
A
PHE
283
n
305
PHE
283
A
ASN
284
n
306
ASN
284
A
HIS
285
n
307
HIS
285
A
GLY
286
n
308
GLY
286
A
PHE
287
n
309
PHE
287
A
ASN
288
n
310
ASN
288
A
CYS
289
n
311
CYS
289
A
ALA
290
n
312
ALA
290
A
GLU
291
n
313
GLU
291
A
ALA
292
n
314
ALA
292
A
ILE
293
n
315
ILE
293
A
ASN
294
n
316
ASN
294
A
PHE
295
n
317
PHE
295
A
ALA
296
n
318
ALA
296
A
THR
297
n
319
THR
297
A
PRO
298
n
320
PRO
298
A
ARG
299
n
321
ARG
299
A
TRP
300
n
322
TRP
300
A
ILE
301
n
323
ILE
301
A
ASP
302
n
324
ASP
302
A
TYR
303
n
325
TYR
303
A
GLY
304
n
326
GLY
304
A
LYS
305
n
327
LYS
305
A
MET
306
n
328
MET
306
A
ALA
307
n
329
ALA
307
A
SER
308
n
330
SER
308
A
GLN
309
n
331
GLN
309
A
CYS
310
n
332
CYS
310
A
SER
311
n
333
SER
311
A
CYS
312
n
334
CYS
312
A
GLY
313
n
335
GLY
313
A
GLU
314
n
336
GLU
314
A
ALA
315
n
337
ALA
315
A
ARG
316
n
338
ARG
316
A
VAL
317
n
339
VAL
317
A
THR
318
n
340
THR
318
A
PHE
319
n
341
PHE
319
A
SER
320
n
342
SER
320
A
MET
321
n
343
MET
321
A
ASP
322
n
344
ASP
322
A
ALA
323
n
345
ALA
323
A
PHE
324
n
346
PHE
324
A
VAL
325
n
347
VAL
325
A
ARG
326
n
348
ARG
326
A
ILE
327
n
349
ILE
327
A
LEU
328
n
350
LEU
328
A
GLN
329
n
351
GLN
329
A
PRO
330
n
352
PRO
330
A
GLU
331
n
353
GLU
331
A
ARG
332
n
354
ARG
332
A
TYR
333
n
355
TYR
333
A
ASP
334
n
356
ASP
334
A
LEU
335
n
357
LEU
335
A
TRP
336
n
358
TRP
336
A
LYS
337
n
359
LYS
337
A
ARG
338
n
360
ARG
338
A
GLY
339
n
361
GLY
339
A
GLN
340
n
362
GLN
340
A
ASP
341
n
363
ASP
341
A
n
364
342
A
author_defined_assembly
1
monomeric
A
ASN
65
A
O
ASN
87
1_555
A
MG
403
D
MG
MG
1_555
A
VAL
171
A
O
VAL
193
1_555
103.8
A
HIS
192
A
NE2
HIS
214
1_555
A
NI
402
C
NI
NI
1_555
A
GLU
194
A
OE1
GLU
216
1_555
99.4
A
HIS
192
A
NE2
HIS
214
1_555
A
NI
402
C
NI
NI
1_555
A
HIS
280
A
NE2
HIS
302
1_555
85.4
A
GLU
194
A
OE1
GLU
216
1_555
A
NI
402
C
NI
NI
1_555
A
HIS
280
A
NE2
HIS
302
1_555
90.0
A
HIS
192
A
NE2
HIS
214
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2
OGA
1_555
167.1
A
GLU
194
A
OE1
GLU
216
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2
OGA
1_555
93.5
A
HIS
280
A
NE2
HIS
302
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2
OGA
1_555
95.6
A
HIS
192
A
NE2
HIS
214
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2'
OGA
1_555
90.4
A
GLU
194
A
OE1
GLU
216
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2'
OGA
1_555
169.2
A
HIS
280
A
NE2
HIS
302
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2'
OGA
1_555
95.5
A
OGA
404
E
O2
OGA
1_555
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2'
OGA
1_555
76.7
A
HIS
192
A
NE2
HIS
214
1_555
A
NI
402
C
NI
NI
1_555
A
HOH
590
Q
O
HOH
1_555
90.8
A
GLU
194
A
OE1
GLU
216
1_555
A
NI
402
C
NI
NI
1_555
A
HOH
590
Q
O
HOH
1_555
86.3
A
HIS
280
A
NE2
HIS
302
1_555
A
NI
402
C
NI
NI
1_555
A
HOH
590
Q
O
HOH
1_555
174.2
A
OGA
404
E
O2
OGA
1_555
A
NI
402
C
NI
NI
1_555
A
HOH
590
Q
O
HOH
1_555
89.1
A
OGA
404
E
O2'
OGA
1_555
A
NI
402
C
NI
NI
1_555
A
HOH
590
Q
O
HOH
1_555
88.9
A
CYS
238
A
SG
CYS
260
1_555
A
ZN
401
B
ZN
ZN
1_555
A
HIS
244
A
NE2
HIS
266
1_555
106.9
A
CYS
238
A
SG
CYS
260
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
310
A
SG
CYS
332
1_555
115.3
A
HIS
244
A
NE2
HIS
266
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
310
A
SG
CYS
332
1_555
111.5
A
CYS
238
A
SG
CYS
260
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
312
A
SG
CYS
334
1_555
115.4
A
HIS
244
A
NE2
HIS
266
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
312
A
SG
CYS
334
1_555
100.5
A
CYS
310
A
SG
CYS
332
1_555
A
ZN
401
B
ZN
ZN
1_555
A
CYS
312
A
SG
CYS
334
1_555
106.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
21
A
N
PHE
43
A
O
LYS
50
A
O
LYS
72
A
N
ILE
51
A
N
ILE
73
A
O
PHE
271
A
O
PHE
293
A
O
MET
272
A
O
MET
294
A
N
ASN
202
A
N
ASN
224
A
N
TYR
203
A
N
TYR
225
A
O
GLU
291
A
O
GLU
313
A
O
ALA
290
A
O
ALA
312
A
N
TYR
181
A
N
TYR
203
A
O
PHE
182
A
O
PHE
204
A
N
GLY
137
A
N
GLY
159
A
O
TYR
136
A
O
TYR
158
A
N
LEU
75
A
N
LEU
97
A
N
GLN
76
A
N
GLN
98
A
O
LYS
91
A
O
LYS
113
A
N
PHE
86
A
N
PHE
108
A
O
LEU
248
A
O
LEU
270
A
N
ILE
71
A
N
ILE
93
A
O
MET
96
A
O
MET
118
A
N
PHE
189
A
N
PHE
211
A
O
GLY
282
A
O
GLY
304
A
O
ALA
281
A
O
ALA
303
A
N
TYR
213
A
N
TYR
235
A
N
LYS
210
A
N
LYS
232
A
O
GLN
266
A
O
GLN
288
1
A
HOH
825
Q
HOH
1
A
CG
LYS
58
A
CG
LYS
80
1
Y
1
A
CD
LYS
58
A
CD
LYS
80
1
Y
1
A
CE
LYS
58
A
CE
LYS
80
1
Y
1
A
NZ
LYS
58
A
NZ
LYS
80
1
Y
1
A
CG
GLU
61
A
CG
GLU
83
1
Y
1
A
CD
GLU
61
A
CD
GLU
83
1
Y
1
A
OE1
GLU
61
A
OE1
GLU
83
1
Y
1
A
OE2
GLU
61
A
OE2
GLU
83
1
Y
1
A
NZ
LYS
92
A
NZ
LYS
114
1
Y
1
A
NE
ARG
225
A
NE
ARG
247
1
Y
1
A
CZ
ARG
225
A
CZ
ARG
247
1
Y
1
A
NH1
ARG
225
A
NH1
ARG
247
1
Y
1
A
NH2
ARG
225
A
NH2
ARG
247
1
Y
1
A
CD
LYS
255
A
CD
LYS
277
1
Y
1
A
CE
LYS
255
A
CE
LYS
277
1
Y
1
A
NZ
LYS
255
A
NZ
LYS
277
1
Y
1
A
CG
ARG
316
A
CG
ARG
338
1
Y
1
A
CD
ARG
316
A
CD
ARG
338
1
Y
1
A
NE
ARG
316
A
NE
ARG
338
1
Y
1
A
CZ
ARG
316
A
CZ
ARG
338
1
Y
1
A
NH1
ARG
316
A
NH1
ARG
338
1
Y
1
A
NH2
ARG
316
A
NH2
ARG
338
1
Y
1
A
CG
ARG
338
A
CG
ARG
360
1
Y
1
A
CD
ARG
338
A
CD
ARG
360
1
Y
1
A
NE
ARG
338
A
NE
ARG
360
1
Y
1
A
CZ
ARG
338
A
CZ
ARG
360
1
Y
1
A
NH1
ARG
338
A
NH1
ARG
360
1
Y
1
A
NH2
ARG
338
A
NH2
ARG
360
1
Y
1
A
CB
GLN
340
A
CB
GLN
362
0
Y
1
A
CG
GLN
340
A
CG
GLN
362
0
Y
1
A
CG
ASP
341
A
CG
ASP
363
1
Y
1
A
OD1
ASP
341
A
OD1
ASP
363
1
Y
1
A
OD2
ASP
341
A
OD2
ASP
363
1
Y
1
A
MET
-21
A
MET
1
1
Y
1
A
HIS
-20
A
HIS
2
1
Y
1
A
HIS
-19
A
HIS
3
1
Y
1
A
HIS
-18
A
HIS
4
1
Y
1
A
HIS
-17
A
HIS
5
1
Y
1
A
HIS
-16
A
HIS
6
1
Y
1
A
HIS
-15
A
HIS
7
1
Y
1
A
SER
-14
A
SER
8
1
Y
1
A
SER
-13
A
SER
9
1
Y
1
A
GLY
-12
A
GLY
10
1
Y
1
A
VAL
-11
A
VAL
11
1
Y
1
A
ASP
-10
A
ASP
12
1
Y
1
A
LEU
-9
A
LEU
13
1
Y
1
A
GLY
-8
A
GLY
14
1
Y
1
A
THR
-7
A
THR
15
1
Y
1
A
GLU
-6
A
GLU
16
1
Y
1
A
ASN
-5
A
ASN
17
1
Y
1
A
LEU
-4
A
LEU
18
1
Y
1
A
TYR
-3
A
TYR
19
1
Y
1
A
PHE
-2
A
PHE
20
1
Y
1
A
GLN
-1
A
GLN
21
1
Y
1
A
SER
0
A
SER
22
1
Y
1
A
MET
1
A
MET
23
1
Y
1
A
GLU
2
A
GLU
24
1
Y
1
A
THR
3
A
THR
25
1
Y
1
A
MET
4
A
MET
26
1
Y
1
A
LYS
5
A
LYS
27
1
Y
1
A
SER
6
A
SER
28
1
Y
1
A
LYS
7
A
LYS
29
1
Y
1
A
ALA
8
A
ALA
30
1
Y
1
A
ASN
9
A
ASN
31
1
Y
1
A
CYS
10
A
CYS
32
1
Y
1
A
ARG
342
A
ARG
364
1
Y
1
A
A
O
O
HOH
HOH
656
836
1.98
1
A
A
O
O
HOH
HOH
541
909
2.14
1
A
A
O
O
HOH
HOH
725
838
2.15
1
A
A
OE1
O2
GLU
EDO
68
408
2.16
1
A
A
O
O
HOH
HOH
723
831
2.19
1
A
GLU
39
0.072
SIDE CHAIN
1
6.93
0.90
118.30
125.23
A
A
A
CB
CG
OD1
ASP
ASP
ASP
30
30
30
N
1
-3.63
0.50
120.30
116.67
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
45
45
45
N
1
-3.98
0.50
120.30
116.32
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
82
82
82
A
A
A
N
1
4.16
0.50
120.30
124.46
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
82
82
82
B
B
B
N
1
-3.06
0.50
120.30
117.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
82
82
82
B
B
B
N
1
-9.82
1.60
100.20
90.38
A
A
A
CG
SD
CE
MET
MET
MET
96
96
96
B
B
B
N
1
3.34
0.50
120.30
123.64
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
102
102
102
N
1
3.09
0.50
120.30
123.39
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
123
123
123
B
B
B
N
1
-6.08
0.90
118.30
112.22
A
A
A
CB
CG
OD2
ASP
ASP
ASP
139
139
139
N
1
-7.87
1.20
123.30
115.43
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
167
167
167
N
1
15.06
2.30
111.70
126.76
A
A
A
CD
CE
NZ
LYS
LYS
LYS
210
210
210
B
B
B
N
1
5.12
0.70
120.80
125.92
A
A
A
CB
CG
CD1
PHE
PHE
PHE
231
231
231
N
1
3.12
0.50
120.30
123.42
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
299
299
299
N
1
-3.49
0.50
120.30
116.81
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
299
299
299
N
1
12.35
1.60
100.20
112.55
A
A
A
CG
SD
CE
MET
MET
MET
306
306
306
N
1
8.32
0.90
118.30
126.62
A
A
A
CB
CG
OD1
ASP
ASP
ASP
322
322
322
N
1
-8.56
0.90
118.30
109.74
A
A
A
CB
CG
OD2
ASP
ASP
ASP
322
322
322
N
1
-6.81
0.50
120.30
113.49
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
326
326
326
N
1
16.05
2.20
113.40
129.45
A
A
A
CA
CB
CG
GLN
GLN
GLN
340
340
340
N
1
30.77
2.00
121.60
152.37
A
A
A
CG
CD
OE1
GLN
GLN
GLN
340
340
340
N
1
-32.25
2.40
116.70
84.45
A
A
A
CG
CD
NE2
GLN
GLN
GLN
340
340
340
N
1
A
A
CD
OE1
GLU
GLU
208
208
-0.075
0.011
1.252
1.177
N
1
A
A
CG
CD
GLN
GLN
340
340
0.349
0.023
1.506
1.855
N
1
A
LYS
186
74.20
-5.50
1
A
MET
196
B
57.15
16.02
1
A
ALA
240
-141.37
48.57
1
A
ARG
316
22.53
108.91
98.370
18.1210
7.750
0.2600
-0.0000
-0.0000
0.2600
-0.0000
-0.5200
0.9720
0.9670
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
0.1785
0.1573
0.1583
1.3500
29.400
4249
82074
4.9000
99.6800
0.7520
0.0310
RANDOM
1
THROUGHOUT
0.000
FOURIER SYNTHESIS
0.0480
0.0500
0.8000
0.8000
1.4000
4D6R
MAXIMUM LIKELIHOOD
MASK
1.3500
29.400
442
3166
30.07
33.89
60
0
2664
330
0.027
0.019
3035
0.002
0.020
2760
2.464
1.942
4136
1.186
3.000
6362
6.637
5.000
383
36.413
23.600
150
11.270
15.000
488
17.902
15.000
18
0.144
0.200
412
0.013
0.021
3575
0.003
0.020
780
1.821
1.509
1439
1.806
1.503
1438
2.632
2.258
1835
0.2610
0.2540
1.3820
284
5759
6043
20
96.1600
1.350
29.400
5PJO
86429
0.999
0.049
0.015
0.051
1
27.900
1018141
11.800
1
99.700
0.710
1.350
1.370
21906
4122
0.729
0.329
0.787
1
2.200
5.300
94.500
0.032
7.260
29.400
7286
666
0.996
0.010
0.034
1
75.700
10.900
98.600
refinement
Garib N. Murshudov
garib@ysbl.york.ac.uk
Fortran_77
http://www.ccp4.ac.uk/dist/html/refmac5.html
REFMAC
program
5.8.0131
data scaling
Phil Evans
11/07/12
http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html
Aimless
program
0.1.27
data extraction
PDB
deposit@deposit.rcsb.org
SEP. 23, 2016
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.23
data reduction
XDS
program
phasing
REFMAC
program
PanDDA analysis group deposition -- Crystal Structure of JMJD2D after initial refinement with no ligand modelled (structure 73)
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
7
N
N
7
N
N
7
N
N
8
N
N
A
ASP
30
A
ASP
52
HELX_P
A
GLN
41
A
GLN
63
1
AA1
12
A
GLY
42
A
GLY
64
HELX_P
A
ALA
46
A
ALA
68
5
AA2
5
A
VAL
98
A
VAL
120
HELX_P
A
SER
107
A
SER
129
1
AA3
10
A
ASN
117
A
ASN
139
HELX_P
A
ARG
129
A
ARG
151
1
AA4
13
A
ILE
130
A
ILE
152
HELX_P
A
ASN
132
A
ASN
154
5
AA5
3
A
THR
159
A
THR
181
HELX_P
A
GLY
169
A
GLY
191
1
AA6
11
A
GLU
194
A
GLU
216
HELX_P
A
LEU
198
A
LEU
220
5
AA7
5
A
PRO
216
A
PRO
238
HELX_P
A
GLU
218
A
GLU
240
5
AA8
3
A
HIS
219
A
HIS
241
HELX_P
A
PHE
231
A
PHE
253
1
AA9
13
A
PHE
231
A
PHE
253
HELX_P
A
CYS
238
A
CYS
260
1
AB1
8
A
ALA
240
A
ALA
262
HELX_P
A
LYS
245
A
LYS
267
5
AB2
6
A
SER
250
A
SER
272
HELX_P
A
ASN
257
A
ASN
279
1
AB3
8
A
ARG
299
A
ARG
321
HELX_P
A
ALA
307
A
ALA
329
1
AB4
9
A
PHE
319
A
PHE
341
HELX_P
A
GLN
329
A
GLN
351
1
AB5
11
A
GLN
329
A
GLN
351
HELX_P
A
ASP
341
A
ASP
363
1
AB6
13
metalc
2.702
A
ASN
65
A
O
ASN
87
1_555
A
MG
403
D
MG
MG
1_555
metalc
2.739
A
VAL
171
A
O
VAL
193
1_555
A
MG
403
D
MG
MG
8_555
metalc
2.173
A
HIS
192
A
NE2
HIS
214
1_555
A
NI
402
C
NI
NI
1_555
metalc
1.994
A
GLU
194
A
OE1
GLU
216
1_555
A
NI
402
C
NI
NI
1_555
metalc
2.407
A
CYS
238
A
SG
CYS
260
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.076
A
HIS
244
A
NE2
HIS
266
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.160
A
HIS
280
A
NE2
HIS
302
1_555
A
NI
402
C
NI
NI
1_555
metalc
2.268
A
CYS
310
A
SG
CYS
332
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.287
A
CYS
312
A
SG
CYS
334
1_555
A
ZN
401
B
ZN
ZN
1_555
metalc
2.112
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2
OGA
1_555
metalc
2.000
A
NI
402
C
NI
NI
1_555
A
OGA
404
E
O2'
OGA
1_555
metalc
2.150
A
NI
402
C
NI
NI
1_555
A
HOH
590
Q
O
HOH
1_555
OXIDOREDUCTASE
PanDDA, SGC - Diamond I04-1 fragment screening, Jmj domain, epigenetics, OXIDOREDUCTASE
KDM4D_HUMAN
UNP
1
1
Q6B0I6
METMKSKANCAQNPNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETYDNISEILIATPLQQVAS
GRAGVFTQYHKKKKAMTVGEYRHLANSKKYQTPPHQNFEDLERKYWKNRIYNSPIYGADISGSLFDENTKQWNLGHLGTI
QDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGA
FLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEARVTFS
MDAFVRILQPERYDLWKRGQDR
1
342
5PJO
1
342
Q6B0I6
A
1
23
364
1
expression tag
MET
-21
5PJO
A
Q6B0I6
UNP
1
1
expression tag
HIS
-20
5PJO
A
Q6B0I6
UNP
2
1
expression tag
HIS
-19
5PJO
A
Q6B0I6
UNP
3
1
expression tag
HIS
-18
5PJO
A
Q6B0I6
UNP
4
1
expression tag
HIS
-17
5PJO
A
Q6B0I6
UNP
5
1
expression tag
HIS
-16
5PJO
A
Q6B0I6
UNP
6
1
expression tag
HIS
-15
5PJO
A
Q6B0I6
UNP
7
1
expression tag
SER
-14
5PJO
A
Q6B0I6
UNP
8
1
expression tag
SER
-13
5PJO
A
Q6B0I6
UNP
9
1
expression tag
GLY
-12
5PJO
A
Q6B0I6
UNP
10
1
expression tag
VAL
-11
5PJO
A
Q6B0I6
UNP
11
1
expression tag
ASP
-10
5PJO
A
Q6B0I6
UNP
12
1
expression tag
LEU
-9
5PJO
A
Q6B0I6
UNP
13
1
expression tag
GLY
-8
5PJO
A
Q6B0I6
UNP
14
1
expression tag
THR
-7
5PJO
A
Q6B0I6
UNP
15
1
expression tag
GLU
-6
5PJO
A
Q6B0I6
UNP
16
1
expression tag
ASN
-5
5PJO
A
Q6B0I6
UNP
17
1
expression tag
LEU
-4
5PJO
A
Q6B0I6
UNP
18
1
expression tag
TYR
-3
5PJO
A
Q6B0I6
UNP
19
1
expression tag
PHE
-2
5PJO
A
Q6B0I6
UNP
20
1
expression tag
GLN
-1
5PJO
A
Q6B0I6
UNP
21
1
expression tag
SER
0
5PJO
A
Q6B0I6
UNP
22
10
2
4
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
MET
19
A
MET
41
A
PHE
21
A
PHE
43
A
LEU
48
A
LEU
70
A
ILE
51
A
ILE
73
A
PHE
271
A
PHE
293
A
THR
274
A
THR
296
A
TYR
199
A
TYR
221
A
GLY
207
A
GLY
229
A
ASN
288
A
ASN
310
A
PHE
295
A
PHE
317
A
TYR
179
A
TYR
201
A
GLY
183
A
GLY
205
A
ILE
135
A
ILE
157
A
SER
141
A
SER
163
A
LEU
75
A
LEU
97
A
ARG
82
A
ARG
104
A
VAL
85
A
VAL
107
A
LYS
92
A
LYS
114
A
ALA
247
A
ALA
269
A
ILE
249
A
ILE
271
A
LEU
70
A
LEU
92
A
ILE
71
A
ILE
93
A
MET
96
A
MET
118
A
THR
97
A
THR
119
A
THR
188
A
THR
210
A
HIS
192
A
HIS
214
A
TYR
279
A
TYR
301
A
ASN
284
A
ASN
306
A
LYS
210
A
LYS
232
A
VAL
215
A
VAL
237
A
ASN
262
A
ASN
284
A
GLN
266
A
GLN
288
binding site for residue ZN A 401
A
ZN
401
Software
4
binding site for residue NI A 402
A
NI
402
Software
5
binding site for residue MG A 403
A
MG
403
Software
6
binding site for residue OGA A 404
A
OGA
404
Software
13
binding site for residue EDO A 405
A
EDO
405
Software
7
binding site for residue EDO A 406
A
EDO
406
Software
4
binding site for residue EDO A 407
A
EDO
407
Software
8
binding site for residue EDO A 408
A
EDO
408
Software
7
binding site for residue EDO A 409
A
EDO
409
Software
4
binding site for residue EDO A 410
A
EDO
410
Software
10
binding site for residue EDO A 411
A
EDO
411
Software
6
binding site for residue EDO A 412
A
EDO
412
Software
6
binding site for residue SO4 A 413
A
SO4
413
Software
6
binding site for residue SO4 A 414
A
SO4
414
Software
8
binding site for residue SO4 A 415
A
SO4
415
Software
4
A
CYS
238
A
CYS
260
4
1_555
A
HIS
244
A
HIS
266
4
1_555
A
CYS
310
A
CYS
332
4
1_555
A
CYS
312
A
CYS
334
4
1_555
A
HIS
192
A
HIS
214
5
1_555
A
GLU
194
A
GLU
216
5
1_555
A
HIS
280
A
HIS
302
5
1_555
A
OGA
404
E
OGA
5
1_555
A
HOH
590
Q
HOH
5
1_555
A
ASN
65
A
ASN
87
6
1_555
A
ILE
66
A
ILE
88
6
1_555
A
SER
67
A
SER
89
6
1_555
A
GLU
68
A
GLU
90
6
1_555
A
ILE
69
A
ILE
91
6
1_555
A
VAL
171
A
VAL
193
6
8_555
A
TYR
136
A
TYR
158
13
1_555
A
PHE
189
A
PHE
211
13
1_555
A
HIS
192
A
HIS
214
13
1_555
A
GLU
194
A
GLU
216
13
1_555
A
SER
200
A
SER
222
13
1_555
A
ASN
202
A
ASN
224
13
1_555
A
LYS
210
A
LYS
232
13
1_555
A
HIS
280
A
HIS
302
13
1_555
A
ALA
292
A
ALA
314
13
1_555
A
NI
402
C
NI
13
1_555
A
EDO
412
M
EDO
13
1_555
A
HOH
590
Q
HOH
13
1_555
A
HOH
622
Q
HOH
13
1_555
A
LYS
150
A
LYS
172
7
1_555
A
GLN
151
A
GLN
173
7
1_555
A
TRP
152
A
TRP
174
7
1_555
A
ASN
153
A
ASN
175
7
1_555
A
HIS
156
A
HIS
178
7
1_555
A
HOH
611
Q
HOH
7
1_555
A
HOH
736
Q
HOH
7
1_555
A
PRO
251
A
PRO
273
4
1_555
A
THR
252
A
THR
274
4
1_555
A
ARG
263
A
ARG
285
4
1_555
A
HOH
532
Q
HOH
4
1_555
A
GLU
224
A
GLU
246
8
1_555
A
ALA
240
A
ALA
262
8
1_555
A
PHE
241
A
PHE
263
8
1_555
A
LEU
242
A
LEU
264
8
1_555
A
TYR
279
A
TYR
301
8
1_555
A
SER
308
A
SER
330
8
1_555
A
HOH
510
Q
HOH
8
1_555
A
HOH
519
Q
HOH
8
1_555
A
ASP
64
A
ASP
86
7
1_555
A
ASN
65
A
ASN
87
7
1_555
A
ILE
66
A
ILE
88
7
1_555
A
SER
67
A
SER
89
7
1_555
A
GLU
68
A
GLU
90
7
1_555
A
ARG
82
A
ARG
104
7
4_555
A
HOH
574
Q
HOH
7
1_555
A
PHE
118
A
PHE
140
4
1_555
A
ILE
264
A
ILE
286
4
1_555
A
THR
265
A
THR
287
4
1_555
A
HOH
552
Q
HOH
4
1_555
A
TRP
57
A
TRP
79
10
1_555
A
LYS
58
A
LYS
80
10
1_555
A
ALA
59
A
ALA
81
10
1_555
A
ARG
60
A
ARG
82
10
1_555
A
TYR
63
A
TYR
85
10
1_555
A
TYR
203
A
TYR
225
10
1_555
A
HOH
502
Q
HOH
10
1_555
A
HOH
520
Q
HOH
10
1_555
A
HOH
571
Q
HOH
10
1_555
A
HOH
685
Q
HOH
10
1_555
A
SER
80
A
SER
102
6
1_555
A
THR
87
A
THR
109
6
1_555
A
CYS
168
A
CYS
190
6
6_545
A
LYS
305
A
LYS
327
6
6_545
A
HOH
525
Q
HOH
6
1_555
A
HOH
536
Q
HOH
6
1_555
A
TYR
181
A
TYR
203
6
1_555
A
SER
200
A
SER
222
6
1_555
A
ALA
292
A
ALA
314
6
1_555
A
ASN
294
A
ASN
316
6
1_555
A
OGA
404
E
OGA
6
1_555
A
HOH
590
Q
HOH
6
1_555
A
ARG
102
A
ARG
124
6
1_555
A
HIS
103
A
HIS
125
6
1_555
A
ASN
106
A
ASN
128
6
1_555
A
HOH
507
Q
HOH
6
1_555
A
HOH
648
Q
HOH
6
1_555
A
HOH
703
Q
HOH
6
1_555
A
ARG
60
A
ARG
82
8
1_555
A
GLU
61
A
GLU
83
8
1_555
A
THR
62
A
THR
84
8
1_555
A
ASN
65
A
ASN
87
8
1_555
A
HOH
504
Q
HOH
8
1_555
A
HOH
554
Q
HOH
8
1_555
A
HOH
591
Q
HOH
8
1_555
A
HOH
747
Q
HOH
8
1_555
A
ARG
123
A
ARG
145
4
1_555
A
LYS
124
A
LYS
146
4
1_555
A
LYS
127
A
LYS
149
4
1_555
A
ASN
128
A
ASN
150
4
1_555
96
P 43 21 2