0.011108
0.006413
0.000000
0.000000
0.012826
0.000000
0.000000
0.000000
0.009388
0.000000
0.000000
0.000000
Keedy, D.A.
Hill, Z.B.
Biel, J.T.
Kang, E.
Rettenmaier, T.J.
Brandao-Neto, J.
von Delft, F.
Wells, J.A.
Fraser, J.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
90.029
90.029
106.524
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H3 Cl2 N O2
192.000
2,6-dichloropyridine-4-carboxylic acid
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C4 H12 N O3 1
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
TRIS BUFFER
non-polymer
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
O
N
184
N
C
N
185
N
O
Y
186
N
C
Y
187
N
C
Y
188
N
C
N
189
N
CL
Y
190
N
N
Y
191
N
C
N
192
N
CL
Y
193
N
C
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
O
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
R
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
N
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
C
N
366
N
N
N
367
N
O
N
368
N
O
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
N
393
N
O
N
394
N
O
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
N
411
N
C
N
412
N
C
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
Y
175
N
doub
Y
176
N
sing
Y
177
N
sing
N
178
N
sing
N
179
N
sing
Y
180
N
doub
Y
181
N
doub
Y
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
Y
262
N
doub
Y
263
N
sing
Y
264
N
sing
N
265
N
sing
Y
266
N
doub
N
267
N
sing
Y
268
N
doub
N
269
N
sing
Y
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
Y
331
N
doub
Y
332
N
sing
Y
333
N
sing
N
334
N
sing
Y
335
N
doub
Y
336
N
sing
Y
337
N
sing
N
338
N
sing
Y
339
N
sing
Y
340
N
doub
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
US
Elife
2050-084X
7
10.7554/eLife.36307
29877794
An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering.
2018
0000-0002-9184-7586
0000-0002-0935-8362
0000-0001-6015-320X
0000-0002-6693-8603
0000-0003-0378-0017
0000-0001-8267-5519
0000-0002-5080-2859
10.2210/pdb5qej/pdb
pdb_00005qej
Several residues are not properly linked with short C-N bond distance for certain conformers.
100
1
PIXEL
2016-09-25
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
0.92819
1.0
I04-1
Diamond
0.92819
SYNCHROTRON
DIAMOND BEAMLINE I04-1
37345.562
Tyrosine-protein phosphatase non-receptor type 1
3.1.3.48
catalytic domain
C32S, C92V
1
man
polymer
192.000
2,6-dichloropyridine-4-carboxylic acid
1
syn
non-polymer
122.143
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
1
syn
non-polymer
18.015
water
217
nat
water
Protein-tyrosine phosphatase 1B,PTP-1B
no
no
MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPSRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRS
YILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL
ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD
PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPH
N
MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPSRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRS
YILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL
ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD
PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPH
N
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
321
PTPN1, PTP1B
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
Biological sequence
pET24b
1
3.34
63.14
VAPOR DIFFUSION
7.5
well solution: 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol
277
citation
citation_author
entity
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Data collection
Database references
Structure summary
Data collection
Database references
1
0
2018-10-10
1
1
2019-02-06
1
2
2024-03-06
_citation.country
_citation.journal_abbrev
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_entity.formula_weight
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2018-08-30
REL
REL
PTP1B screened against fragment libraries by X-ray crystallography at the XChem facility of Diamond Light Source beamline I04-1
PanDDA analysis group deposition of models with modelled events (e.g. bound ligands)
changed state
JKP
2,6-dichloropyridine-4-carboxylic acid
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
HOH
water
LIG
1
2
JKP
JKP
401
A
TRS
500
3
TRS
TRS
402
A
HOH
151
4
HOH
HOH
501
A
HOH
122
4
HOH
HOH
502
A
HOH
106
4
HOH
HOH
503
A
HOH
206
4
HOH
HOH
504
A
HOH
38
4
HOH
HOH
505
A
HOH
54
4
HOH
HOH
506
A
HOH
183
4
HOH
HOH
507
A
HOH
127
4
HOH
HOH
508
A
HOH
112
4
HOH
HOH
509
A
HOH
213
4
HOH
HOH
510
A
HOH
132
4
HOH
HOH
511
A
HOH
185
4
HOH
HOH
512
A
HOH
214
4
HOH
HOH
513
A
HOH
65
4
HOH
HOH
514
A
HOH
31
4
HOH
HOH
515
A
HOH
52
4
HOH
HOH
516
A
HOH
116
4
HOH
HOH
517
A
HOH
113
4
HOH
HOH
518
A
HOH
91
4
HOH
HOH
519
A
HOH
17
4
HOH
HOH
520
A
HOH
161
4
HOH
HOH
521
A
HOH
3
4
HOH
HOH
522
A
HOH
133
4
HOH
HOH
523
A
HOH
50
4
HOH
HOH
524
A
HOH
168
4
HOH
HOH
525
A
HOH
12
4
HOH
HOH
526
A
HOH
90
4
HOH
HOH
527
A
HOH
212
4
HOH
HOH
528
A
HOH
60
4
HOH
HOH
529
A
HOH
35
4
HOH
HOH
530
A
HOH
29
4
HOH
HOH
531
A
HOH
76
4
HOH
HOH
532
A
HOH
19
4
HOH
HOH
533
A
HOH
202
4
HOH
HOH
534
A
HOH
139
4
HOH
HOH
535
A
HOH
130
4
HOH
HOH
536
A
HOH
23
4
HOH
HOH
537
A
HOH
16
4
HOH
HOH
538
A
HOH
55
4
HOH
HOH
539
A
HOH
94
4
HOH
HOH
540
A
HOH
26
4
HOH
HOH
541
A
HOH
42
4
HOH
HOH
542
A
HOH
125
4
HOH
HOH
543
A
HOH
153
4
HOH
HOH
544
A
HOH
85
4
HOH
HOH
545
A
HOH
4
4
HOH
HOH
546
A
HOH
110
4
HOH
HOH
547
A
HOH
1
4
HOH
HOH
548
A
HOH
131
4
HOH
HOH
549
A
HOH
13
4
HOH
HOH
550
A
HOH
39
4
HOH
HOH
551
A
HOH
144
4
HOH
HOH
552
A
HOH
36
4
HOH
HOH
553
A
HOH
215
4
HOH
HOH
554
A
HOH
84
4
HOH
HOH
555
A
HOH
121
4
HOH
HOH
556
A
HOH
6
4
HOH
HOH
557
A
HOH
148
4
HOH
HOH
558
A
HOH
14
4
HOH
HOH
559
A
HOH
216
4
HOH
HOH
560
A
HOH
205
4
HOH
HOH
561
A
HOH
41
4
HOH
HOH
562
A
HOH
111
4
HOH
HOH
563
A
HOH
204
4
HOH
HOH
564
A
HOH
25
4
HOH
HOH
565
A
HOH
68
4
HOH
HOH
566
A
HOH
186
4
HOH
HOH
567
A
HOH
126
4
HOH
HOH
568
A
HOH
7
4
HOH
HOH
569
A
HOH
136
4
HOH
HOH
570
A
HOH
211
4
HOH
HOH
571
A
HOH
10
4
HOH
HOH
572
A
HOH
5
4
HOH
HOH
573
A
HOH
118
4
HOH
HOH
574
A
HOH
21
4
HOH
HOH
575
A
HOH
93
4
HOH
HOH
576
A
HOH
102
4
HOH
HOH
577
A
HOH
11
4
HOH
HOH
578
A
HOH
74
4
HOH
HOH
579
A
HOH
124
4
HOH
HOH
580
A
HOH
64
4
HOH
HOH
581
A
HOH
152
4
HOH
HOH
582
A
HOH
82
4
HOH
HOH
583
A
HOH
71
4
HOH
HOH
584
A
HOH
177
4
HOH
HOH
585
A
HOH
24
4
HOH
HOH
586
A
HOH
72
4
HOH
HOH
587
A
HOH
30
4
HOH
HOH
588
A
HOH
138
4
HOH
HOH
589
A
HOH
104
4
HOH
HOH
590
A
HOH
75
4
HOH
HOH
591
A
HOH
22
4
HOH
HOH
592
A
HOH
8
4
HOH
HOH
593
A
HOH
179
4
HOH
HOH
594
A
HOH
9
4
HOH
HOH
595
A
HOH
77
4
HOH
HOH
596
A
HOH
143
4
HOH
HOH
597
A
HOH
171
4
HOH
HOH
598
A
HOH
100
4
HOH
HOH
599
A
HOH
195
4
HOH
HOH
600
A
HOH
53
4
HOH
HOH
601
A
HOH
56
4
HOH
HOH
602
A
HOH
40
4
HOH
HOH
603
A
HOH
88
4
HOH
HOH
604
A
HOH
32
4
HOH
HOH
605
A
HOH
203
4
HOH
HOH
606
A
HOH
57
4
HOH
HOH
607
A
HOH
73
4
HOH
HOH
608
A
HOH
145
4
HOH
HOH
609
A
HOH
187
4
HOH
HOH
610
A
HOH
18
4
HOH
HOH
611
A
HOH
15
4
HOH
HOH
612
A
HOH
140
4
HOH
HOH
613
A
HOH
120
4
HOH
HOH
614
A
HOH
189
4
HOH
HOH
615
A
HOH
43
4
HOH
HOH
616
A
HOH
86
4
HOH
HOH
617
A
HOH
180
4
HOH
HOH
618
A
HOH
51
4
HOH
HOH
619
A
HOH
45
4
HOH
HOH
620
A
HOH
37
4
HOH
HOH
621
A
HOH
34
4
HOH
HOH
622
A
HOH
105
4
HOH
HOH
623
A
HOH
79
4
HOH
HOH
624
A
HOH
70
4
HOH
HOH
625
A
HOH
156
4
HOH
HOH
626
A
HOH
157
4
HOH
HOH
627
A
HOH
59
4
HOH
HOH
628
A
HOH
87
4
HOH
HOH
629
A
HOH
101
4
HOH
HOH
630
A
HOH
78
4
HOH
HOH
631
A
HOH
20
4
HOH
HOH
632
A
HOH
103
4
HOH
HOH
633
A
HOH
107
4
HOH
HOH
634
A
HOH
81
4
HOH
HOH
635
A
HOH
33
4
HOH
HOH
636
A
HOH
96
4
HOH
HOH
637
A
HOH
49
4
HOH
HOH
638
A
HOH
89
4
HOH
HOH
639
A
HOH
47
4
HOH
HOH
640
A
HOH
69
4
HOH
HOH
641
A
HOH
92
4
HOH
HOH
642
A
HOH
119
4
HOH
HOH
643
A
HOH
61
4
HOH
HOH
644
A
HOH
2
4
HOH
HOH
645
A
HOH
99
4
HOH
HOH
646
A
HOH
154
4
HOH
HOH
647
A
HOH
67
4
HOH
HOH
648
A
HOH
44
4
HOH
HOH
649
A
HOH
27
4
HOH
HOH
650
A
HOH
98
4
HOH
HOH
651
A
HOH
198
4
HOH
HOH
652
A
HOH
142
4
HOH
HOH
653
A
HOH
62
4
HOH
HOH
654
A
HOH
135
4
HOH
HOH
655
A
HOH
150
4
HOH
HOH
656
A
HOH
196
4
HOH
HOH
657
A
HOH
63
4
HOH
HOH
658
A
HOH
123
4
HOH
HOH
659
A
HOH
172
4
HOH
HOH
660
A
HOH
210
4
HOH
HOH
661
A
HOH
149
4
HOH
HOH
662
A
HOH
158
4
HOH
HOH
663
A
HOH
48
4
HOH
HOH
664
A
HOH
169
4
HOH
HOH
665
A
HOH
146
4
HOH
HOH
666
A
HOH
175
4
HOH
HOH
667
A
HOH
188
4
HOH
HOH
668
A
HOH
191
4
HOH
HOH
669
A
HOH
155
4
HOH
HOH
670
A
HOH
141
4
HOH
HOH
671
A
HOH
199
4
HOH
HOH
672
A
HOH
128
4
HOH
HOH
673
A
HOH
181
4
HOH
HOH
674
A
HOH
178
4
HOH
HOH
675
A
HOH
129
4
HOH
HOH
676
A
HOH
208
4
HOH
HOH
677
A
HOH
217
4
HOH
HOH
678
A
HOH
165
4
HOH
HOH
679
A
HOH
115
4
HOH
HOH
680
A
HOH
147
4
HOH
HOH
681
A
HOH
46
4
HOH
HOH
682
A
HOH
170
4
HOH
HOH
683
A
HOH
66
4
HOH
HOH
684
A
HOH
114
4
HOH
HOH
685
A
HOH
193
4
HOH
HOH
686
A
HOH
28
4
HOH
HOH
687
A
HOH
95
4
HOH
HOH
688
A
HOH
176
4
HOH
HOH
689
A
HOH
174
4
HOH
HOH
690
A
HOH
166
4
HOH
HOH
691
A
HOH
162
4
HOH
HOH
692
A
HOH
209
4
HOH
HOH
693
A
HOH
109
4
HOH
HOH
694
A
HOH
137
4
HOH
HOH
695
A
HOH
134
4
HOH
HOH
696
A
HOH
190
4
HOH
HOH
697
A
HOH
200
4
HOH
HOH
698
A
HOH
80
4
HOH
HOH
699
A
HOH
173
4
HOH
HOH
700
A
HOH
97
4
HOH
HOH
701
A
HOH
58
4
HOH
HOH
702
A
HOH
163
4
HOH
HOH
703
A
HOH
182
4
HOH
HOH
704
A
HOH
164
4
HOH
HOH
705
A
HOH
117
4
HOH
HOH
706
A
HOH
197
4
HOH
HOH
707
A
HOH
167
4
HOH
HOH
708
A
HOH
201
4
HOH
HOH
709
A
HOH
108
4
HOH
HOH
710
A
HOH
194
4
HOH
HOH
711
A
HOH
83
4
HOH
HOH
712
A
HOH
160
4
HOH
HOH
713
A
HOH
207
4
HOH
HOH
714
A
HOH
184
4
HOH
HOH
715
A
HOH
159
4
HOH
HOH
716
A
HOH
192
4
HOH
HOH
717
A
MET
1
n
1
MET
1
A
GLU
2
n
2
GLU
2
A
MET
3
n
3
MET
3
A
GLU
4
n
4
GLU
4
A
LYS
5
n
5
LYS
5
A
GLU
6
n
6
GLU
6
A
PHE
7
n
7
PHE
7
A
GLU
8
n
8
GLU
8
A
GLN
9
n
9
GLN
9
A
ILE
10
n
10
ILE
10
A
ASP
11
n
11
ASP
11
A
LYS
12
n
12
LYS
12
A
SER
13
n
13
SER
13
A
GLY
14
n
14
GLY
14
A
SER
15
n
15
SER
15
A
TRP
16
n
16
TRP
16
A
ALA
17
n
17
ALA
17
A
ALA
18
n
18
ALA
18
A
ILE
19
n
19
ILE
19
A
TYR
20
n
20
TYR
20
A
GLN
21
n
21
GLN
21
A
ASP
22
n
22
ASP
22
A
ILE
23
n
23
ILE
23
A
ARG
24
n
24
ARG
24
A
HIS
25
n
25
HIS
25
A
GLU
26
n
26
GLU
26
A
ALA
27
n
27
ALA
27
A
SER
28
n
28
SER
28
A
ASP
29
n
29
ASP
29
A
PHE
30
n
30
PHE
30
A
PRO
31
n
31
PRO
31
A
SER
32
n
32
SER
32
A
ARG
33
n
33
ARG
33
A
VAL
34
n
34
VAL
34
A
ALA
35
n
35
ALA
35
A
LYS
36
n
36
LYS
36
A
LEU
37
n
37
LEU
37
A
PRO
38
n
38
PRO
38
A
LYS
39
n
39
LYS
39
A
ASN
40
n
40
ASN
40
A
LYS
41
n
41
LYS
41
A
ASN
42
n
42
ASN
42
A
ARG
43
n
43
ARG
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
TYR
46
n
46
TYR
46
A
ARG
47
n
47
ARG
47
A
ASP
48
n
48
ASP
48
A
VAL
49
n
49
VAL
49
A
SER
50
n
50
SER
50
A
PRO
51
n
51
PRO
51
A
PHE
52
n
52
PHE
52
A
ASP
53
n
53
ASP
53
A
HIS
54
n
54
HIS
54
A
SER
55
n
55
SER
55
A
ARG
56
n
56
ARG
56
A
ILE
57
n
57
ILE
57
A
LYS
58
n
58
LYS
58
A
LEU
59
n
59
LEU
59
A
HIS
60
n
60
HIS
60
A
GLN
61
n
61
GLN
61
A
GLU
62
n
62
GLU
62
A
ASP
63
n
63
ASP
63
A
ASN
64
n
64
ASN
64
A
ASP
65
n
65
ASP
65
A
TYR
66
n
66
TYR
66
A
ILE
67
n
67
ILE
67
A
ASN
68
n
68
ASN
68
A
ALA
69
n
69
ALA
69
A
SER
70
n
70
SER
70
A
LEU
71
n
71
LEU
71
A
ILE
72
n
72
ILE
72
A
LYS
73
n
73
LYS
73
A
MET
74
n
74
MET
74
A
GLU
75
n
75
GLU
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
GLN
78
n
78
GLN
78
A
ARG
79
n
79
ARG
79
A
SER
80
n
80
SER
80
A
TYR
81
n
81
TYR
81
A
ILE
82
n
82
ILE
82
A
LEU
83
n
83
LEU
83
A
THR
84
n
84
THR
84
A
GLN
85
n
85
GLN
85
A
GLY
86
n
86
GLY
86
A
PRO
87
n
87
PRO
87
A
LEU
88
n
88
LEU
88
A
PRO
89
n
89
PRO
89
A
ASN
90
n
90
ASN
90
A
THR
91
n
91
THR
91
A
VAL
92
n
92
VAL
92
A
GLY
93
n
93
GLY
93
A
HIS
94
n
94
HIS
94
A
PHE
95
n
95
PHE
95
A
TRP
96
n
96
TRP
96
A
GLU
97
n
97
GLU
97
A
MET
98
n
98
MET
98
A
VAL
99
n
99
VAL
99
A
TRP
100
n
100
TRP
100
A
GLU
101
n
101
GLU
101
A
GLN
102
n
102
GLN
102
A
LYS
103
n
103
LYS
103
A
SER
104
n
104
SER
104
A
ARG
105
n
105
ARG
105
A
GLY
106
n
106
GLY
106
A
VAL
107
n
107
VAL
107
A
VAL
108
n
108
VAL
108
A
MET
109
n
109
MET
109
A
LEU
110
n
110
LEU
110
A
ASN
111
n
111
ASN
111
A
ARG
112
n
112
ARG
112
A
VAL
113
n
113
VAL
113
A
MET
114
n
114
MET
114
A
GLU
115
n
115
GLU
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
SER
118
n
118
SER
118
A
LEU
119
n
119
LEU
119
A
LYS
120
n
120
LYS
120
A
CYS
121
n
121
CYS
121
A
ALA
122
n
122
ALA
122
A
GLN
123
n
123
GLN
123
A
TYR
124
n
124
TYR
124
A
TRP
125
n
125
TRP
125
A
PRO
126
n
126
PRO
126
A
GLN
127
n
127
GLN
127
A
LYS
128
n
128
LYS
128
A
GLU
129
n
129
GLU
129
A
GLU
130
n
130
GLU
130
A
LYS
131
n
131
LYS
131
A
GLU
132
n
132
GLU
132
A
MET
133
n
133
MET
133
A
ILE
134
n
134
ILE
134
A
PHE
135
n
135
PHE
135
A
GLU
136
n
136
GLU
136
A
ASP
137
n
137
ASP
137
A
THR
138
n
138
THR
138
A
ASN
139
n
139
ASN
139
A
LEU
140
n
140
LEU
140
A
LYS
141
n
141
LYS
141
A
LEU
142
n
142
LEU
142
A
THR
143
n
143
THR
143
A
LEU
144
n
144
LEU
144
A
ILE
145
n
145
ILE
145
A
SER
146
n
146
SER
146
A
GLU
147
n
147
GLU
147
A
ASP
148
n
148
ASP
148
A
ILE
149
n
149
ILE
149
A
LYS
150
n
150
LYS
150
A
SER
151
n
151
SER
151
A
TYR
152
n
152
TYR
152
A
TYR
153
n
153
TYR
153
A
THR
154
n
154
THR
154
A
VAL
155
n
155
VAL
155
A
ARG
156
n
156
ARG
156
A
GLN
157
n
157
GLN
157
A
LEU
158
n
158
LEU
158
A
GLU
159
n
159
GLU
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
ASN
162
n
162
ASN
162
A
LEU
163
n
163
LEU
163
A
THR
164
n
164
THR
164
A
THR
165
n
165
THR
165
A
GLN
166
n
166
GLN
166
A
GLU
167
n
167
GLU
167
A
THR
168
n
168
THR
168
A
ARG
169
n
169
ARG
169
A
GLU
170
n
170
GLU
170
A
ILE
171
n
171
ILE
171
A
LEU
172
n
172
LEU
172
A
HIS
173
n
173
HIS
173
A
PHE
174
n
174
PHE
174
A
HIS
175
n
175
HIS
175
A
TYR
176
n
176
TYR
176
A
THR
177
n
177
THR
177
A
THR
178
n
178
THR
178
A
TRP
179
n
179
TRP
179
A
PRO
180
n
180
PRO
180
A
ASP
181
n
181
ASP
181
A
PHE
182
n
182
PHE
182
A
GLY
183
n
183
GLY
183
A
VAL
184
n
184
VAL
184
A
PRO
185
n
185
PRO
185
A
GLU
186
n
186
GLU
186
A
SER
187
n
187
SER
187
A
PRO
188
n
188
PRO
188
A
ALA
189
n
189
ALA
189
A
SER
190
n
190
SER
190
A
PHE
191
n
191
PHE
191
A
LEU
192
n
192
LEU
192
A
ASN
193
n
193
ASN
193
A
PHE
194
n
194
PHE
194
A
LEU
195
n
195
LEU
195
A
PHE
196
n
196
PHE
196
A
LYS
197
n
197
LYS
197
A
VAL
198
n
198
VAL
198
A
ARG
199
n
199
ARG
199
A
GLU
200
n
200
GLU
200
A
SER
201
n
201
SER
201
A
GLY
202
n
202
GLY
202
A
SER
203
n
203
SER
203
A
LEU
204
n
204
LEU
204
A
SER
205
n
205
SER
205
A
PRO
206
n
206
PRO
206
A
GLU
207
n
207
GLU
207
A
HIS
208
n
208
HIS
208
A
GLY
209
n
209
GLY
209
A
PRO
210
n
210
PRO
210
A
VAL
211
n
211
VAL
211
A
VAL
212
n
212
VAL
212
A
VAL
213
n
213
VAL
213
A
HIS
214
n
214
HIS
214
A
CYS
215
n
215
CYS
215
A
SER
216
n
216
SER
216
A
ALA
217
n
217
ALA
217
A
GLY
218
n
218
GLY
218
A
ILE
219
n
219
ILE
219
A
GLY
220
n
220
GLY
220
A
ARG
221
n
221
ARG
221
A
SER
222
n
222
SER
222
A
GLY
223
n
223
GLY
223
A
THR
224
n
224
THR
224
A
PHE
225
n
225
PHE
225
A
CYS
226
n
226
CYS
226
A
LEU
227
n
227
LEU
227
A
ALA
228
n
228
ALA
228
A
ASP
229
n
229
ASP
229
A
THR
230
n
230
THR
230
A
CYS
231
n
231
CYS
231
A
LEU
232
n
232
LEU
232
A
LEU
233
n
233
LEU
233
A
LEU
234
n
234
LEU
234
A
MET
235
n
235
MET
235
A
ASP
236
n
236
ASP
236
A
LYS
237
n
237
LYS
237
A
ARG
238
n
238
ARG
238
A
LYS
239
n
239
LYS
239
A
ASP
240
n
240
ASP
240
A
PRO
241
n
241
PRO
241
A
SER
242
n
242
SER
242
A
SER
243
n
243
SER
243
A
VAL
244
n
244
VAL
244
A
ASP
245
n
245
ASP
245
A
ILE
246
n
246
ILE
246
A
LYS
247
n
247
LYS
247
A
LYS
248
n
248
LYS
248
A
VAL
249
n
249
VAL
249
A
LEU
250
n
250
LEU
250
A
LEU
251
n
251
LEU
251
A
GLU
252
n
252
GLU
252
A
MET
253
n
253
MET
253
A
ARG
254
n
254
ARG
254
A
LYS
255
n
255
LYS
255
A
PHE
256
n
256
PHE
256
A
ARG
257
n
257
ARG
257
A
MET
258
n
258
MET
258
A
GLY
259
n
259
GLY
259
A
LEU
260
n
260
LEU
260
A
ILE
261
n
261
ILE
261
A
GLN
262
n
262
GLN
262
A
THR
263
n
263
THR
263
A
ALA
264
n
264
ALA
264
A
ASP
265
n
265
ASP
265
A
GLN
266
n
266
GLN
266
A
LEU
267
n
267
LEU
267
A
ARG
268
n
268
ARG
268
A
PHE
269
n
269
PHE
269
A
SER
270
n
270
SER
270
A
TYR
271
n
271
TYR
271
A
LEU
272
n
272
LEU
272
A
ALA
273
n
273
ALA
273
A
VAL
274
n
274
VAL
274
A
ILE
275
n
275
ILE
275
A
GLU
276
n
276
GLU
276
A
GLY
277
n
277
GLY
277
A
ALA
278
n
278
ALA
278
A
LYS
279
n
279
LYS
279
A
PHE
280
n
280
PHE
280
A
ILE
281
n
281
ILE
281
A
MET
282
n
282
MET
282
A
GLY
283
n
283
GLY
283
A
ASP
284
n
284
ASP
284
A
n
285
285
A
n
286
286
A
n
287
287
A
n
288
288
A
n
289
289
A
n
290
290
A
n
291
291
A
n
292
292
A
n
293
293
A
n
294
294
A
n
295
295
A
n
296
296
A
n
297
297
A
n
298
298
A
n
299
299
A
n
300
300
A
n
301
301
A
n
302
302
A
n
303
303
A
n
304
304
A
n
305
305
A
n
306
306
A
n
307
307
A
n
308
308
A
n
309
309
A
n
310
310
A
n
311
311
A
n
312
312
A
n
313
313
A
n
314
314
A
n
315
315
A
n
316
316
A
n
317
317
A
n
318
318
A
n
319
319
A
n
320
320
A
n
321
321
A
author_and_software_defined_assembly
PISA
1
monomeric
130
2
13780
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
57
A
N
ILE
57
A
O
ALA
69
A
O
ALA
69
A
N
ILE
72
A
N
ILE
72
A
O
TYR
81
A
O
TYR
81
A
N
ILE
82
A
N
ILE
82
A
O
VAL
213
A
O
VAL
213
A
O
VAL
212
A
O
VAL
212
A
N
VAL
108
A
N
VAL
108
A
N
VAL
107
A
N
VAL
107
A
O
PHE
174
A
O
PHE
174
A
O
HIS
173
A
O
HIS
173
A
N
ARG
156
A
N
ARG
156
A
O
GLN
157
A
O
GLN
157
A
N
ILE
145
A
N
ILE
145
A
O
LEU
140
A
O
LEU
140
A
N
PHE
135
A
N
PHE
135
A
N
GLU
115
A
N
GLU
115
A
O
SER
118
A
O
SER
118
1
A
SER
285
A
SER
285
1
Y
1
A
SER
286
A
SER
286
1
Y
1
A
VAL
287
A
VAL
287
1
Y
1
A
GLN
288
A
GLN
288
1
Y
1
A
ASP
289
A
ASP
289
1
Y
1
A
GLN
290
A
GLN
290
1
Y
1
A
TRP
291
A
TRP
291
1
Y
1
A
LYS
292
A
LYS
292
1
Y
1
A
GLU
293
A
GLU
293
1
Y
1
A
LEU
294
A
LEU
294
1
Y
1
A
SER
295
A
SER
295
1
Y
1
A
HIS
296
A
HIS
296
1
Y
1
A
GLU
297
A
GLU
297
1
Y
1
A
ASP
298
A
ASP
298
1
Y
1
A
LEU
299
A
LEU
299
1
Y
1
A
GLU
300
A
GLU
300
1
Y
1
A
PRO
301
A
PRO
301
1
Y
1
A
PRO
302
A
PRO
302
1
Y
1
A
PRO
303
A
PRO
303
1
Y
1
A
GLU
304
A
GLU
304
1
Y
1
A
HIS
305
A
HIS
305
1
Y
1
A
ILE
306
A
ILE
306
1
Y
1
A
PRO
307
A
PRO
307
1
Y
1
A
PRO
308
A
PRO
308
1
Y
1
A
PRO
309
A
PRO
309
1
Y
1
A
PRO
310
A
PRO
310
1
Y
1
A
ARG
311
A
ARG
311
1
Y
1
A
PRO
312
A
PRO
312
1
Y
1
A
PRO
313
A
PRO
313
1
Y
1
A
LYS
314
A
LYS
314
1
Y
1
A
ARG
315
A
ARG
315
1
Y
1
A
ILE
316
A
ILE
316
1
Y
1
A
LEU
317
A
LEU
317
1
Y
1
A
GLU
318
A
GLU
318
1
Y
1
A
PRO
319
A
PRO
319
1
Y
1
A
HIS
320
A
HIS
320
1
Y
1
A
ASN
321
A
ASN
321
1
Y
1
A
A
HZ1
O
LYS
HOH
247
503
1.08
C
1
A
A
HZ1
O
LYS
HOH
247
503
1.08
D
1
A
A
HZ1
O
LYS
HOH
36
504
1.34
C
1
A
A
HZ1
O
LYS
HOH
36
504
1.34
D
1
A
A
HD2
O
PRO
HOH
38
555
1.43
C
1
A
A
HD2
O
PRO
HOH
38
555
1.43
D
1
A
A
HE
O
ARG
HOH
112
511
1.45
C
1
A
A
HE
O
ARG
HOH
112
511
1.45
D
1
A
A
HE2
O
LYS
HOH
73
502
1.49
C
1
A
A
HE2
O
LYS
HOH
73
502
1.49
D
1
A
A
HZ2
O
LYS
HOH
73
502
1.50
C
1
A
A
HZ2
O
LYS
HOH
73
502
1.50
D
1
A
A
CL07
O
JKP
HOH
401
582
1.72
C
1
A
A
CL07
O
JKP
HOH
401
582
1.72
D
1
A
A
OE1
O
GLN
HOH
262
501
1.84
A
1
A
A
OE1
O
GLN
HOH
262
501
1.84
B
1
A
A
NZ
O
LYS
HOH
73
502
1.92
C
1
A
A
NZ
O
LYS
HOH
73
502
1.92
D
1
A
A
NZ
O
LYS
HOH
247
503
1.92
C
1
A
A
NZ
O
LYS
HOH
247
503
1.92
D
1
A
A
CE
O
LYS
HOH
73
502
1.94
C
1
A
A
CE
O
LYS
HOH
73
502
1.94
D
1
A
A
NZ
O
LYS
HOH
36
504
1.94
C
1
A
A
NZ
O
LYS
HOH
36
504
1.94
D
1
A
A
O
O
HOH
HOH
698
709
1.96
1
A
A
O
O
HOH
HOH
654
704
2.00
1
A
A
O
O
HOH
HOH
671
712
2.01
1
A
A
OE1
O
GLN
HOH
262
501
2.08
C
1
A
A
OE1
O
GLN
HOH
262
501
2.08
D
1
A
A
NZ
O
LYS
HOH
73
505
2.09
C
1
A
A
NZ
O
LYS
HOH
73
505
2.09
D
1
A
A
OG
O
SER
HOH
28
506
2.10
C
1
A
A
OG
O
SER
HOH
28
506
2.10
D
1
A
A
O
O
HOH
HOH
651
695
2.11
1
A
A
O
O
HOH
HOH
670
713
2.11
1
A
A
O
O
HOH
HOH
690
696
2.14
1
A
A
O
O
HOH
HOH
501
558
2.17
1
A
A
O
O
HOH
HOH
594
704
2.18
1
A
A
O
O
HOH
HOH
614
715
2.18
1
A
A
C
N
ALA
SER
27
28
1.19
C
1
A
A
C
N
ALA
SER
27
28
1.19
D
1
A
A
C
N
VAL
HIS
213
214
1.13
C
1
A
A
C
N
VAL
HIS
213
214
1.13
D
1
A
A
C
N
ASP
THR
229
230
1.20
C
1
A
A
C
N
ASP
THR
229
230
1.20
D
1
-18.97
2.70
111.00
92.03
A
A
A
N
CA
C
GLU
GLU
GLU
2
2
2
C
C
C
N
1
-18.97
2.70
111.00
92.03
A
A
A
N
CA
C
GLU
GLU
GLU
2
2
2
D
D
D
N
1
20.58
2.30
115.30
135.88
A
A
A
CA
CB
CG
LEU
LEU
LEU
37
37
37
C
C
C
N
1
20.58
2.30
115.30
135.88
A
A
A
CA
CB
CG
LEU
LEU
LEU
37
37
37
D
D
D
N
1
-16.94
2.70
111.00
94.06
A
A
A
N
CA
C
ASN
ASN
ASN
64
64
64
C
C
C
N
1
-16.94
2.70
111.00
94.06
A
A
A
N
CA
C
ASN
ASN
ASN
64
64
64
D
D
D
N
1
-18.73
3.00
112.40
93.67
A
A
A
CB
CG
SD
MET
MET
MET
109
109
109
C
C
C
N
1
-18.73
3.00
112.40
93.67
A
A
A
CB
CG
SD
MET
MET
MET
109
109
109
D
D
D
N
1
10.21
1.70
111.00
121.21
A
A
A
CB
CG
CD2
LEU
LEU
LEU
110
110
110
C
C
C
N
1
10.21
1.70
111.00
121.21
A
A
A
CB
CG
CD2
LEU
LEU
LEU
110
110
110
D
D
D
N
1
8.78
1.10
114.20
122.98
A
A
A
CA
CB
SG
CYS
CYS
CYS
121
121
121
A
A
A
N
1
8.78
1.10
114.20
122.98
A
A
A
CA
CB
SG
CYS
CYS
CYS
121
121
121
B
B
B
N
1
5.90
0.90
118.30
124.20
A
A
A
CB
CG
OD1
ASP
ASP
ASP
137
137
137
C
C
C
N
1
5.90
0.90
118.30
124.20
A
A
A
CB
CG
OD1
ASP
ASP
ASP
137
137
137
D
D
D
N
1
-5.86
0.90
118.30
112.44
A
A
A
CB
CG
OD2
ASP
ASP
ASP
137
137
137
C
C
C
N
1
-5.86
0.90
118.30
112.44
A
A
A
CB
CG
OD2
ASP
ASP
ASP
137
137
137
D
D
D
N
1
-14.01
2.10
128.40
114.39
A
A
A
C
N
CD
VAL
PRO
PRO
184
185
185
C
C
C
Y
1
-14.01
2.10
128.40
114.39
A
A
A
C
N
CD
VAL
PRO
PRO
184
185
185
D
D
D
Y
1
-3.33
0.50
120.30
116.97
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
199
199
199
C
C
C
N
1
-3.33
0.50
120.30
116.97
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
199
199
199
D
D
D
N
1
-15.16
1.70
111.00
95.84
A
A
A
CB
CG
CD2
LEU
LEU
LEU
204
204
204
C
C
C
N
1
-15.16
1.70
111.00
95.84
A
A
A
CB
CG
CD2
LEU
LEU
LEU
204
204
204
D
D
D
N
1
15.16
2.50
113.10
128.26
A
A
A
N
CA
C
GLY
GLY
GLY
259
259
259
C
C
C
N
1
15.16
2.50
113.10
128.26
A
A
A
N
CA
C
GLY
GLY
GLY
259
259
259
D
D
D
N
1
A
A
C
N
GLU
ALA
26
27
0.154
0.023
1.336
1.490
C
Y
1
A
A
C
N
GLU
ALA
26
27
0.154
0.023
1.336
1.490
D
Y
1
A
A
C
N
ALA
SER
27
28
-0.149
0.023
1.336
1.187
C
Y
1
A
A
C
N
ALA
SER
27
28
-0.149
0.023
1.336
1.187
D
Y
1
A
A
C
N
SER
ARG
55
56
0.138
0.023
1.336
1.474
C
Y
1
A
A
C
N
SER
ARG
55
56
0.138
0.023
1.336
1.474
D
Y
1
A
A
C
N
ASP
TYR
65
66
0.146
0.023
1.336
1.482
C
Y
1
A
A
C
N
ASP
TYR
65
66
0.146
0.023
1.336
1.482
D
Y
1
A
A
CG
CD1
TRP
TRP
96
96
-0.111
0.014
1.363
1.252
C
C
N
1
A
A
CG
CD1
TRP
TRP
96
96
-0.111
0.014
1.363
1.252
D
D
N
1
A
A
CD
OE2
GLU
GLU
132
132
-0.074
0.011
1.252
1.178
C
C
N
1
A
A
CD
OE2
GLU
GLU
132
132
-0.074
0.011
1.252
1.178
D
D
N
1
A
A
C
N
VAL
HIS
213
214
-0.208
0.023
1.336
1.128
C
Y
1
A
A
C
N
VAL
HIS
213
214
-0.208
0.023
1.336
1.128
D
Y
1
A
A
C
N
ASP
THR
229
230
-0.141
0.023
1.336
1.195
C
Y
1
A
A
C
N
ASP
THR
229
230
-0.141
0.023
1.336
1.195
D
Y
1
A
MET
3
C
-21.56
-29.65
1
A
MET
3
D
-21.56
-29.65
1
A
SER
15
C
-99.00
32.06
1
A
SER
15
D
-99.00
32.06
1
A
LYS
39
C
-62.50
0.45
1
A
LYS
39
D
-62.50
0.45
1
A
HIS
60
C
-103.56
48.33
1
A
HIS
60
D
-103.56
48.33
1
A
ASN
64
C
170.97
123.13
1
A
ASN
64
D
170.97
123.13
1
A
LYS
131
C
-112.03
69.02
1
A
LYS
131
D
-112.03
69.02
1
A
ASN
139
C
55.83
75.02
1
A
ASN
139
D
55.83
75.02
1
A
LYS
150
C
-114.37
-166.69
1
A
LYS
150
D
-114.37
-166.69
1
A
THR
165
C
-142.07
-16.63
1
A
THR
165
D
-142.07
-16.63
1
A
GLN
166
C
92.31
-8.06
1
A
GLN
166
D
92.31
-8.06
1
A
CYS
215
A
-133.44
-133.22
1
A
CYS
215
B
-133.44
-133.22
1
A
CYS
215
C
-132.70
-116.24
1
A
CYS
215
D
-132.70
-116.24
1
A
SER
216
C
-103.83
-60.02
1
A
SER
216
D
-103.83
-60.02
1
A
ILE
219
A
-135.80
-30.09
1
A
ILE
219
B
-135.80
-30.09
1
A
ILE
261
A
74.55
111.33
1
A
ILE
261
B
74.55
111.33
1
A
ILE
261
C
80.94
97.86
1
A
ILE
261
D
80.94
97.86
1
A
PHE
280
C
154.36
-51.92
1
A
PHE
280
D
154.36
-51.92
1
A
MET
282
C
-164.74
3.68
1
A
MET
282
D
-164.74
3.68
147.720
45.9098
4.920
0.2422
0.2012
0.2028
1.9240
62.9160
1507
36866
38373
3.9300
99.8500
0.2900
1
THROUGHOUT
1.370
MOLECULAR REPLACEMENT
25.3900
1.3000
1.3000
ML
FLAT BULK SOLVENT MODEL
1.9240
62.9160
217
2580
71.75
50.82
46
0
2317
284
0.023
9097
2.173
12340
0.176
1278
0.013
1630
20.150
3527
0.3549
0.2970
1.9857
131
3313
3444
11
100.0000
0.3206
0.2789
2.0567
138
3287
3425
11
100.0000
0.3287
0.2648
2.1390
130
3316
3446
11
100.0000
0.3200
0.2728
2.2364
139
3281
3420
11
100.0000
0.3100
0.2698
2.3543
137
3337
3474
11
100.0000
0.2413
0.2108
2.5018
136
3329
3465
11
100.0000
0.2215
0.1941
2.6950
143
3342
3485
11
100.0000
0.2385
0.1852
2.9662
137
3352
3489
11
100.0000
0.2278
0.1888
3.3954
134
3364
3498
11
100.0000
0.2157
0.1778
4.2777
140
3420
3560
11
100.0000
0.2251
0.1809
62.9492
142
3525
3667
11
100.0000
34.160
1.920
62.915
5QEJ
73298
-3.000
0.996
0.145
0.162
1.150
1
9.250
377781
99.900
1.154
1.920
2.040
1.010
62160
11847
11799
0.576
1.283
1
0
99.600
0.798
2.040
2.180
1.710
57563
11190
11182
0.784
0.890
1
0
99.900
0.563
2.180
2.360
2.790
49550
10393
10369
0.877
0.635
1
0
99.800
0.372
2.360
2.580
5.400
49203
9551
9544
0.948
0.415
1
0
99.900
0.250
2.580
2.880
8.830
45573
8622
8622
0.974
0.278
1
0
100.000
0.145
2.880
3.330
14.300
40014
7646
7645
0.988
0.161
1
0
100.000
0.084
3.330
4.070
23.290
33977
6400
6400
0.995
0.093
1
0
100.000
0.059
4.070
5.750
28.870
25330
4976
4973
0.997
0.065
1
0
99.900
0.047
5.750
62.915
31.960
14411
2767
2764
0.997
0.053
1
0
99.900
refinement
Paul D. Adams
PDAdams@lbl.gov
C++
http://www.phenix-online.org/
PHENIX
package
1.10.1_2155
data scaling
Wolfgang Kabsch
http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html
XSCALE
package
phasing
Randy J. Read
cimr-phaser@lists.cam.ac.uk
http://www-structmed.cimr.cam.ac.uk/phaser/
PHASER
program
data extraction
PDB
deposit@deposit.rcsb.org
July. 13, 2016
C++
http://sw-tools.pdb.org/apps/PDB_EXTRACT/
PDB_EXTRACT
package
3.22
data reduction
Wolfgang Kabsch
http://homes.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xds_program.html
XDS
package
PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMSOA001247b
1
N
N
2
N
N
3
N
N
4
N
N
A
GLU
2
A
GLU
2
HELX_P
A
GLY
14
A
GLY
14
1
AA1
13
A
SER
15
A
SER
15
HELX_P
A
ALA
27
A
ALA
27
1
AA2
13
A
SER
32
A
SER
32
HELX_P
A
LEU
37
A
LEU
37
1
AA3
6
A
PRO
38
A
PRO
38
HELX_P
A
ASN
44
A
ASN
44
5
AA4
7
A
PHE
52
A
PHE
52
HELX_P
A
HIS
54
A
HIS
54
5
AA5
3
A
THR
91
A
THR
91
HELX_P
A
GLN
102
A
GLN
102
1
AA6
12
A
PRO
188
A
PRO
188
HELX_P
A
SER
201
A
SER
201
1
AA7
14
A
GLY
220
A
GLY
220
HELX_P
A
ARG
238
A
ARG
238
1
AA8
19
A
ASP
240
A
ASP
240
HELX_P
A
VAL
244
A
VAL
244
5
AA9
5
A
ASP
245
A
ASP
245
HELX_P
A
ARG
254
A
ARG
254
1
AB1
10
A
THR
263
A
THR
263
HELX_P
A
MET
282
A
MET
282
1
AB2
20
HYDROLASE
PanDDA, SGC - Diamond I04-1 fragment screening, protein tyrosine phosphatase, PTP, protein tyrosine phosphatase 1B, PTP1B, enzyme, allostery, multiconformer, HYDROLASE
PTN1_HUMAN
UNP
1
1
P18031
MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRS
YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL
ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD
PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPH
N
1
321
5QEJ
1
321
P18031
A
1
1
321
1
CYS
engineered mutation
SER
32
5QEJ
A
P18031
UNP
32
32
1
CYS
engineered mutation
VAL
92
5QEJ
A
P18031
UNP
92
92
9
2
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
56
A
ARG
56
A
LYS
58
A
LYS
58
A
TYR
66
A
TYR
66
A
MET
74
A
MET
74
A
ARG
79
A
ARG
79
A
THR
84
A
THR
84
A
VAL
211
A
VAL
211
A
HIS
214
A
HIS
214
A
GLY
106
A
GLY
106
A
MET
109
A
MET
109
A
THR
168
A
THR
168
A
TYR
176
A
TYR
176
A
TYR
153
A
TYR
153
A
ASN
162
A
ASN
162
A
LEU
140
A
LEU
140
A
ILE
149
A
ILE
149
A
MET
133
A
MET
133
A
PHE
135
A
PHE
135
A
MET
114
A
MET
114
A
GLU
115
A
GLU
115
A
SER
118
A
SER
118
A
LEU
119
A
LEU
119
binding site for residue JKP A 401
A
JKP
401
Software
4
binding site for residue TRS A 402
A
TRS
402
Software
5
A
GLU
76
A
GLU
76
4
1_555
A
ARG
238
A
ARG
238
4
1_555
A
LYS
239
A
LYS
239
4
1_555
A
HOH
582
D
HOH
4
1_555
A
HIS
54
A
HIS
54
5
1_555
A
LYS
128
A
LYS
128
5
4_455
A
GLU
129
A
GLU
129
5
4_455
A
GLU
130
A
GLU
130
5
4_455
A
HOH
604
D
HOH
5
1_555
152
P 31 2 1