0.011138 0.006430 0.000000 0.000000 0.012861 0.000000 0.000000 0.000000 0.009392 0.000000 0.000000 0.000000 Keedy, D.A. Hill, Z.B. Biel, J.T. Kang, E. Rettenmaier, T.J. Brandao-Neto, J. von Delft, F. Wells, J.A. Fraser, J.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 89.784 89.784 106.469 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C9 H17 N O4 S 235.301 (1S,4R,5S,6R)-2-(methylsulfonyl)-2-azabicyclo[3.3.1]nonane-4,6-diol non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C4 H12 N O3 1 122.143 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL TRIS BUFFER non-polymer C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Elife 2050-084X 7 10.7554/eLife.36307 29877794 An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering. 2018 0000-0002-9184-7586 0000-0002-0935-8362 0000-0001-6015-320X 0000-0002-6693-8603 0000-0003-0378-0017 0000-0001-8267-5519 0000-0002-5080-2859 Several residues are not properly linked with short C-N bond distance for certain conformers. 100 1 PIXEL 2016-09-25 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.92819 1.0 I04-1 Diamond 0.92819 SYNCHROTRON DIAMOND BEAMLINE I04-1 37345.562 Tyrosine-protein phosphatase non-receptor type 1 3.1.3.48 catalytic domain C32S, C92V 1 man polymer 235.301 (1S,4R,5S,6R)-2-(methylsulfonyl)-2-azabicyclo[3.3.1]nonane-4,6-diol 1 syn non-polymer 122.143 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 1 syn non-polymer 18.015 water 234 nat water Protein-tyrosine phosphatase 1B,PTP-1B no no MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPSRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRS YILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPH N MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPSRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRS YILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPH N A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 321 PTPN1, PTP1B 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) plasmid Biological sequence pET24b 1 3.32 62.92 VAPOR DIFFUSION 7.5 well solution: 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol 277 citation citation_author entity repository Initial release Data collection Database references Structure summary 1 0 2018-10-10 1 1 2019-02-06 _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year _entity.formula_weight RCSB Y RCSB 2018-08-30 REL REL PTP1B screened against fragment libraries by X-ray crystallography at the XChem facility of Diamond Light Source beamline I04-1 PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) changed state 1 A O HOH 734 6.93 JKA (1S,4R,5S,6R)-2-(methylsulfonyl)-2-azabicyclo[3.3.1]nonane-4,6-diol TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HOH water LIG 2 2 JKA JKA 401 A TRS 500 3 TRS TRS 402 A HOH 138 4 HOH HOH 501 A HOH 188 4 HOH HOH 502 A HOH 38 4 HOH HOH 503 A HOH 85 4 HOH HOH 504 A HOH 187 4 HOH HOH 505 A HOH 219 4 HOH HOH 506 A HOH 183 4 HOH HOH 507 A HOH 72 4 HOH HOH 508 A HOH 228 4 HOH HOH 509 A HOH 223 4 HOH HOH 510 A HOH 139 4 HOH HOH 511 A HOH 75 4 HOH HOH 512 A HOH 125 4 HOH HOH 513 A HOH 58 4 HOH HOH 514 A HOH 149 4 HOH HOH 515 A HOH 111 4 HOH HOH 516 A HOH 123 4 HOH HOH 517 A HOH 47 4 HOH HOH 518 A HOH 161 4 HOH HOH 519 A HOH 90 4 HOH HOH 520 A HOH 169 4 HOH HOH 521 A HOH 32 4 HOH HOH 522 A HOH 31 4 HOH HOH 523 A HOH 134 4 HOH HOH 524 A HOH 129 4 HOH HOH 525 A HOH 84 4 HOH HOH 526 A HOH 233 4 HOH HOH 527 A HOH 114 4 HOH HOH 528 A HOH 86 4 HOH HOH 529 A HOH 63 4 HOH HOH 530 A HOH 21 4 HOH HOH 531 A HOH 19 4 HOH HOH 532 A HOH 100 4 HOH HOH 533 A HOH 220 4 HOH HOH 534 A HOH 194 4 HOH HOH 535 A HOH 17 4 HOH HOH 536 A HOH 124 4 HOH HOH 537 A HOH 29 4 HOH HOH 538 A HOH 91 4 HOH HOH 539 A HOH 61 4 HOH HOH 540 A HOH 78 4 HOH HOH 541 A HOH 218 4 HOH HOH 542 A HOH 54 4 HOH HOH 543 A HOH 88 4 HOH HOH 544 A HOH 229 4 HOH HOH 545 A HOH 44 4 HOH HOH 546 A HOH 36 4 HOH HOH 547 A HOH 200 4 HOH HOH 548 A HOH 4 4 HOH HOH 549 A HOH 24 4 HOH HOH 550 A HOH 214 4 HOH HOH 551 A HOH 53 4 HOH HOH 552 A HOH 59 4 HOH HOH 553 A HOH 23 4 HOH HOH 554 A HOH 8 4 HOH HOH 555 A HOH 42 4 HOH HOH 556 A HOH 112 4 HOH HOH 557 A HOH 40 4 HOH HOH 558 A HOH 25 4 HOH HOH 559 A HOH 57 4 HOH HOH 560 A HOH 43 4 HOH HOH 561 A HOH 211 4 HOH HOH 562 A HOH 1 4 HOH HOH 563 A HOH 121 4 HOH HOH 564 A HOH 30 4 HOH HOH 565 A HOH 11 4 HOH HOH 566 A HOH 5 4 HOH HOH 567 A HOH 97 4 HOH HOH 568 A HOH 46 4 HOH HOH 569 A HOH 113 4 HOH HOH 570 A HOH 118 4 HOH HOH 571 A HOH 12 4 HOH HOH 572 A HOH 131 4 HOH HOH 573 A HOH 13 4 HOH HOH 574 A HOH 225 4 HOH HOH 575 A HOH 6 4 HOH HOH 576 A HOH 202 4 HOH HOH 577 A HOH 26 4 HOH HOH 578 A HOH 80 4 HOH HOH 579 A HOH 71 4 HOH HOH 580 A HOH 140 4 HOH HOH 581 A HOH 3 4 HOH HOH 582 A HOH 82 4 HOH HOH 583 A HOH 103 4 HOH HOH 584 A HOH 41 4 HOH HOH 585 A HOH 128 4 HOH HOH 586 A HOH 182 4 HOH HOH 587 A HOH 166 4 HOH HOH 588 A HOH 232 4 HOH HOH 589 A HOH 52 4 HOH HOH 590 A HOH 158 4 HOH HOH 591 A HOH 212 4 HOH HOH 592 A HOH 10 4 HOH HOH 593 A HOH 93 4 HOH HOH 594 A HOH 35 4 HOH HOH 595 A HOH 16 4 HOH HOH 596 A HOH 160 4 HOH HOH 597 A HOH 213 4 HOH HOH 598 A HOH 22 4 HOH HOH 599 A HOH 9 4 HOH HOH 600 A HOH 39 4 HOH HOH 601 A HOH 99 4 HOH HOH 602 A HOH 173 4 HOH HOH 603 A HOH 136 4 HOH HOH 604 A HOH 107 4 HOH HOH 605 A HOH 152 4 HOH HOH 606 A HOH 209 4 HOH HOH 607 A HOH 94 4 HOH HOH 608 A HOH 2 4 HOH HOH 609 A HOH 18 4 HOH HOH 610 A HOH 14 4 HOH HOH 611 A HOH 141 4 HOH HOH 612 A HOH 226 4 HOH HOH 613 A HOH 70 4 HOH HOH 614 A HOH 164 4 HOH HOH 615 A HOH 172 4 HOH HOH 616 A HOH 56 4 HOH HOH 617 A HOH 7 4 HOH HOH 618 A HOH 192 4 HOH HOH 619 A HOH 207 4 HOH HOH 620 A HOH 60 4 HOH HOH 621 A HOH 101 4 HOH HOH 622 A HOH 119 4 HOH HOH 623 A HOH 83 4 HOH HOH 624 A HOH 203 4 HOH HOH 625 A HOH 189 4 HOH HOH 626 A HOH 168 4 HOH HOH 627 A HOH 231 4 HOH HOH 628 A HOH 50 4 HOH HOH 629 A HOH 199 4 HOH HOH 630 A HOH 20 4 HOH HOH 631 A HOH 49 4 HOH HOH 632 A HOH 177 4 HOH HOH 633 A HOH 208 4 HOH HOH 634 A HOH 133 4 HOH HOH 635 A HOH 109 4 HOH HOH 636 A HOH 34 4 HOH HOH 637 A HOH 74 4 HOH HOH 638 A HOH 15 4 HOH HOH 639 A HOH 98 4 HOH HOH 640 A HOH 106 4 HOH HOH 641 A HOH 92 4 HOH HOH 642 A HOH 143 4 HOH HOH 643 A HOH 37 4 HOH HOH 644 A HOH 33 4 HOH HOH 645 A HOH 162 4 HOH HOH 646 A HOH 142 4 HOH HOH 647 A HOH 95 4 HOH HOH 648 A HOH 217 4 HOH HOH 649 A HOH 66 4 HOH HOH 650 A HOH 181 4 HOH HOH 651 A HOH 105 4 HOH HOH 652 A HOH 108 4 HOH HOH 653 A HOH 51 4 HOH HOH 654 A HOH 79 4 HOH HOH 655 A HOH 62 4 HOH HOH 656 A HOH 45 4 HOH HOH 657 A HOH 206 4 HOH HOH 658 A HOH 147 4 HOH HOH 659 A HOH 77 4 HOH HOH 660 A HOH 68 4 HOH HOH 661 A HOH 67 4 HOH HOH 662 A HOH 127 4 HOH HOH 663 A HOH 165 4 HOH HOH 664 A HOH 126 4 HOH HOH 665 A HOH 234 4 HOH HOH 666 A HOH 191 4 HOH HOH 667 A HOH 69 4 HOH HOH 668 A HOH 146 4 HOH HOH 669 A HOH 196 4 HOH HOH 670 A HOH 197 4 HOH HOH 671 A HOH 104 4 HOH HOH 672 A HOH 48 4 HOH HOH 673 A HOH 81 4 HOH HOH 674 A HOH 27 4 HOH HOH 675 A HOH 55 4 HOH HOH 676 A HOH 201 4 HOH HOH 677 A HOH 159 4 HOH HOH 678 A HOH 122 4 HOH HOH 679 A HOH 175 4 HOH HOH 680 A HOH 151 4 HOH HOH 681 A HOH 145 4 HOH HOH 682 A HOH 144 4 HOH HOH 683 A HOH 193 4 HOH HOH 684 A HOH 102 4 HOH HOH 685 A HOH 120 4 HOH HOH 686 A HOH 222 4 HOH HOH 687 A HOH 186 4 HOH HOH 688 A HOH 204 4 HOH HOH 689 A HOH 179 4 HOH HOH 690 A HOH 224 4 HOH HOH 691 A HOH 205 4 HOH HOH 692 A HOH 215 4 HOH HOH 693 A HOH 148 4 HOH HOH 694 A HOH 76 4 HOH HOH 695 A HOH 153 4 HOH HOH 696 A HOH 170 4 HOH HOH 697 A HOH 227 4 HOH HOH 698 A HOH 116 4 HOH HOH 699 A HOH 28 4 HOH HOH 700 A HOH 96 4 HOH HOH 701 A HOH 190 4 HOH HOH 702 A HOH 73 4 HOH HOH 703 A HOH 110 4 HOH HOH 704 A HOH 115 4 HOH HOH 705 A HOH 216 4 HOH HOH 706 A HOH 176 4 HOH HOH 707 A HOH 167 4 HOH HOH 708 A HOH 184 4 HOH HOH 709 A HOH 87 4 HOH HOH 710 A HOH 195 4 HOH HOH 711 A HOH 64 4 HOH HOH 712 A HOH 185 4 HOH HOH 713 A HOH 174 4 HOH HOH 714 A HOH 117 4 HOH HOH 715 A HOH 130 4 HOH HOH 716 A HOH 137 4 HOH HOH 717 A HOH 180 4 HOH HOH 718 A HOH 156 4 HOH HOH 719 A HOH 135 4 HOH HOH 720 A HOH 221 4 HOH HOH 721 A HOH 163 4 HOH HOH 722 A HOH 230 4 HOH HOH 723 A HOH 89 4 HOH HOH 724 A HOH 157 4 HOH HOH 725 A HOH 65 4 HOH HOH 726 A HOH 198 4 HOH HOH 727 A HOH 150 4 HOH HOH 728 A HOH 132 4 HOH HOH 729 A HOH 178 4 HOH HOH 730 A HOH 171 4 HOH HOH 731 A HOH 154 4 HOH HOH 732 A HOH 155 4 HOH HOH 733 A HOH 210 4 HOH HOH 734 A MET 1 n 1 MET 1 A GLU 2 n 2 GLU 2 A MET 3 n 3 MET 3 A GLU 4 n 4 GLU 4 A LYS 5 n 5 LYS 5 A GLU 6 n 6 GLU 6 A PHE 7 n 7 PHE 7 A GLU 8 n 8 GLU 8 A GLN 9 n 9 GLN 9 A ILE 10 n 10 ILE 10 A ASP 11 n 11 ASP 11 A LYS 12 n 12 LYS 12 A SER 13 n 13 SER 13 A GLY 14 n 14 GLY 14 A SER 15 n 15 SER 15 A TRP 16 n 16 TRP 16 A ALA 17 n 17 ALA 17 A ALA 18 n 18 ALA 18 A ILE 19 n 19 ILE 19 A TYR 20 n 20 TYR 20 A GLN 21 n 21 GLN 21 A ASP 22 n 22 ASP 22 A ILE 23 n 23 ILE 23 A ARG 24 n 24 ARG 24 A HIS 25 n 25 HIS 25 A GLU 26 n 26 GLU 26 A ALA 27 n 27 ALA 27 A SER 28 n 28 SER 28 A ASP 29 n 29 ASP 29 A PHE 30 n 30 PHE 30 A PRO 31 n 31 PRO 31 A SER 32 n 32 SER 32 A ARG 33 n 33 ARG 33 A VAL 34 n 34 VAL 34 A ALA 35 n 35 ALA 35 A LYS 36 n 36 LYS 36 A LEU 37 n 37 LEU 37 A PRO 38 n 38 PRO 38 A LYS 39 n 39 LYS 39 A ASN 40 n 40 ASN 40 A LYS 41 n 41 LYS 41 A ASN 42 n 42 ASN 42 A ARG 43 n 43 ARG 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A TYR 46 n 46 TYR 46 A ARG 47 n 47 ARG 47 A ASP 48 n 48 ASP 48 A VAL 49 n 49 VAL 49 A SER 50 n 50 SER 50 A PRO 51 n 51 PRO 51 A PHE 52 n 52 PHE 52 A ASP 53 n 53 ASP 53 A HIS 54 n 54 HIS 54 A SER 55 n 55 SER 55 A ARG 56 n 56 ARG 56 A ILE 57 n 57 ILE 57 A LYS 58 n 58 LYS 58 A LEU 59 n 59 LEU 59 A HIS 60 n 60 HIS 60 A GLN 61 n 61 GLN 61 A GLU 62 n 62 GLU 62 A ASP 63 n 63 ASP 63 A ASN 64 n 64 ASN 64 A ASP 65 n 65 ASP 65 A TYR 66 n 66 TYR 66 A ILE 67 n 67 ILE 67 A ASN 68 n 68 ASN 68 A ALA 69 n 69 ALA 69 A SER 70 n 70 SER 70 A LEU 71 n 71 LEU 71 A ILE 72 n 72 ILE 72 A LYS 73 n 73 LYS 73 A MET 74 n 74 MET 74 A GLU 75 n 75 GLU 75 A GLU 76 n 76 GLU 76 A ALA 77 n 77 ALA 77 A GLN 78 n 78 GLN 78 A ARG 79 n 79 ARG 79 A SER 80 n 80 SER 80 A TYR 81 n 81 TYR 81 A ILE 82 n 82 ILE 82 A LEU 83 n 83 LEU 83 A THR 84 n 84 THR 84 A GLN 85 n 85 GLN 85 A GLY 86 n 86 GLY 86 A PRO 87 n 87 PRO 87 A LEU 88 n 88 LEU 88 A PRO 89 n 89 PRO 89 A ASN 90 n 90 ASN 90 A THR 91 n 91 THR 91 A VAL 92 n 92 VAL 92 A GLY 93 n 93 GLY 93 A HIS 94 n 94 HIS 94 A PHE 95 n 95 PHE 95 A TRP 96 n 96 TRP 96 A GLU 97 n 97 GLU 97 A MET 98 n 98 MET 98 A VAL 99 n 99 VAL 99 A TRP 100 n 100 TRP 100 A GLU 101 n 101 GLU 101 A GLN 102 n 102 GLN 102 A LYS 103 n 103 LYS 103 A SER 104 n 104 SER 104 A ARG 105 n 105 ARG 105 A GLY 106 n 106 GLY 106 A VAL 107 n 107 VAL 107 A VAL 108 n 108 VAL 108 A MET 109 n 109 MET 109 A LEU 110 n 110 LEU 110 A ASN 111 n 111 ASN 111 A ARG 112 n 112 ARG 112 A VAL 113 n 113 VAL 113 A MET 114 n 114 MET 114 A GLU 115 n 115 GLU 115 A LYS 116 n 116 LYS 116 A GLY 117 n 117 GLY 117 A SER 118 n 118 SER 118 A LEU 119 n 119 LEU 119 A LYS 120 n 120 LYS 120 A CYS 121 n 121 CYS 121 A ALA 122 n 122 ALA 122 A GLN 123 n 123 GLN 123 A TYR 124 n 124 TYR 124 A TRP 125 n 125 TRP 125 A PRO 126 n 126 PRO 126 A GLN 127 n 127 GLN 127 A LYS 128 n 128 LYS 128 A GLU 129 n 129 GLU 129 A GLU 130 n 130 GLU 130 A LYS 131 n 131 LYS 131 A GLU 132 n 132 GLU 132 A MET 133 n 133 MET 133 A ILE 134 n 134 ILE 134 A PHE 135 n 135 PHE 135 A GLU 136 n 136 GLU 136 A ASP 137 n 137 ASP 137 A THR 138 n 138 THR 138 A ASN 139 n 139 ASN 139 A LEU 140 n 140 LEU 140 A LYS 141 n 141 LYS 141 A LEU 142 n 142 LEU 142 A THR 143 n 143 THR 143 A LEU 144 n 144 LEU 144 A ILE 145 n 145 ILE 145 A SER 146 n 146 SER 146 A GLU 147 n 147 GLU 147 A ASP 148 n 148 ASP 148 A ILE 149 n 149 ILE 149 A LYS 150 n 150 LYS 150 A SER 151 n 151 SER 151 A TYR 152 n 152 TYR 152 A TYR 153 n 153 TYR 153 A THR 154 n 154 THR 154 A VAL 155 n 155 VAL 155 A ARG 156 n 156 ARG 156 A GLN 157 n 157 GLN 157 A LEU 158 n 158 LEU 158 A GLU 159 n 159 GLU 159 A LEU 160 n 160 LEU 160 A GLU 161 n 161 GLU 161 A ASN 162 n 162 ASN 162 A LEU 163 n 163 LEU 163 A THR 164 n 164 THR 164 A THR 165 n 165 THR 165 A GLN 166 n 166 GLN 166 A GLU 167 n 167 GLU 167 A THR 168 n 168 THR 168 A ARG 169 n 169 ARG 169 A GLU 170 n 170 GLU 170 A ILE 171 n 171 ILE 171 A LEU 172 n 172 LEU 172 A HIS 173 n 173 HIS 173 A PHE 174 n 174 PHE 174 A HIS 175 n 175 HIS 175 A TYR 176 n 176 TYR 176 A THR 177 n 177 THR 177 A THR 178 n 178 THR 178 A TRP 179 n 179 TRP 179 A PRO 180 n 180 PRO 180 A ASP 181 n 181 ASP 181 A PHE 182 n 182 PHE 182 A GLY 183 n 183 GLY 183 A VAL 184 n 184 VAL 184 A PRO 185 n 185 PRO 185 A GLU 186 n 186 GLU 186 A SER 187 n 187 SER 187 A PRO 188 n 188 PRO 188 A ALA 189 n 189 ALA 189 A SER 190 n 190 SER 190 A PHE 191 n 191 PHE 191 A LEU 192 n 192 LEU 192 A ASN 193 n 193 ASN 193 A PHE 194 n 194 PHE 194 A LEU 195 n 195 LEU 195 A PHE 196 n 196 PHE 196 A LYS 197 n 197 LYS 197 A VAL 198 n 198 VAL 198 A ARG 199 n 199 ARG 199 A GLU 200 n 200 GLU 200 A SER 201 n 201 SER 201 A GLY 202 n 202 GLY 202 A SER 203 n 203 SER 203 A LEU 204 n 204 LEU 204 A SER 205 n 205 SER 205 A PRO 206 n 206 PRO 206 A GLU 207 n 207 GLU 207 A HIS 208 n 208 HIS 208 A GLY 209 n 209 GLY 209 A PRO 210 n 210 PRO 210 A VAL 211 n 211 VAL 211 A VAL 212 n 212 VAL 212 A VAL 213 n 213 VAL 213 A HIS 214 n 214 HIS 214 A CYS 215 n 215 CYS 215 A SER 216 n 216 SER 216 A ALA 217 n 217 ALA 217 A GLY 218 n 218 GLY 218 A ILE 219 n 219 ILE 219 A GLY 220 n 220 GLY 220 A ARG 221 n 221 ARG 221 A SER 222 n 222 SER 222 A GLY 223 n 223 GLY 223 A THR 224 n 224 THR 224 A PHE 225 n 225 PHE 225 A CYS 226 n 226 CYS 226 A LEU 227 n 227 LEU 227 A ALA 228 n 228 ALA 228 A ASP 229 n 229 ASP 229 A THR 230 n 230 THR 230 A CYS 231 n 231 CYS 231 A LEU 232 n 232 LEU 232 A LEU 233 n 233 LEU 233 A LEU 234 n 234 LEU 234 A MET 235 n 235 MET 235 A ASP 236 n 236 ASP 236 A LYS 237 n 237 LYS 237 A ARG 238 n 238 ARG 238 A LYS 239 n 239 LYS 239 A ASP 240 n 240 ASP 240 A PRO 241 n 241 PRO 241 A SER 242 n 242 SER 242 A SER 243 n 243 SER 243 A VAL 244 n 244 VAL 244 A ASP 245 n 245 ASP 245 A ILE 246 n 246 ILE 246 A LYS 247 n 247 LYS 247 A LYS 248 n 248 LYS 248 A VAL 249 n 249 VAL 249 A LEU 250 n 250 LEU 250 A LEU 251 n 251 LEU 251 A GLU 252 n 252 GLU 252 A MET 253 n 253 MET 253 A ARG 254 n 254 ARG 254 A LYS 255 n 255 LYS 255 A PHE 256 n 256 PHE 256 A ARG 257 n 257 ARG 257 A MET 258 n 258 MET 258 A GLY 259 n 259 GLY 259 A LEU 260 n 260 LEU 260 A ILE 261 n 261 ILE 261 A GLN 262 n 262 GLN 262 A THR 263 n 263 THR 263 A ALA 264 n 264 ALA 264 A ASP 265 n 265 ASP 265 A GLN 266 n 266 GLN 266 A LEU 267 n 267 LEU 267 A ARG 268 n 268 ARG 268 A PHE 269 n 269 PHE 269 A SER 270 n 270 SER 270 A TYR 271 n 271 TYR 271 A LEU 272 n 272 LEU 272 A ALA 273 n 273 ALA 273 A VAL 274 n 274 VAL 274 A ILE 275 n 275 ILE 275 A GLU 276 n 276 GLU 276 A GLY 277 n 277 GLY 277 A ALA 278 n 278 ALA 278 A LYS 279 n 279 LYS 279 A PHE 280 n 280 PHE 280 A ILE 281 n 281 ILE 281 A MET 282 n 282 MET 282 A n 283 283 A n 284 284 A n 285 285 A n 286 286 A n 287 287 A n 288 288 A n 289 289 A n 290 290 A n 291 291 A n 292 292 A n 293 293 A n 294 294 A n 295 295 A n 296 296 A n 297 297 A n 298 298 A n 299 299 A n 300 300 A n 301 301 A n 302 302 A n 303 303 A n 304 304 A n 305 305 A n 306 306 A n 307 307 A n 308 308 A n 309 309 A n 310 310 A n 311 311 A n 312 312 A n 313 313 A n 314 314 A n 315 315 A n 316 316 A n 317 317 A n 318 318 A n 319 319 A n 320 320 A n 321 321 A author_and_software_defined_assembly PISA 1 monomeric 130 2 13670 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 57 A N ILE 57 A O ALA 69 A O ALA 69 A N ILE 72 A N ILE 72 A O TYR 81 A O TYR 81 A N ILE 82 A N ILE 82 A O VAL 213 A O VAL 213 A O VAL 212 A O VAL 212 A N VAL 108 A N VAL 108 A N VAL 107 A N VAL 107 A O PHE 174 A O PHE 174 A O HIS 173 A O HIS 173 A N ARG 156 A N ARG 156 A O GLN 157 A O GLN 157 A N ILE 145 A N ILE 145 A O LEU 140 A O LEU 140 A N PHE 135 A N PHE 135 A N GLU 115 A N GLU 115 A O SER 118 A O SER 118 1 A GLY 283 A GLY 283 1 Y 1 A ASP 284 A ASP 284 1 Y 1 A SER 285 A SER 285 1 Y 1 A SER 286 A SER 286 1 Y 1 A VAL 287 A VAL 287 1 Y 1 A GLN 288 A GLN 288 1 Y 1 A ASP 289 A ASP 289 1 Y 1 A GLN 290 A GLN 290 1 Y 1 A TRP 291 A TRP 291 1 Y 1 A LYS 292 A LYS 292 1 Y 1 A GLU 293 A GLU 293 1 Y 1 A LEU 294 A LEU 294 1 Y 1 A SER 295 A SER 295 1 Y 1 A HIS 296 A HIS 296 1 Y 1 A GLU 297 A GLU 297 1 Y 1 A ASP 298 A ASP 298 1 Y 1 A LEU 299 A LEU 299 1 Y 1 A GLU 300 A GLU 300 1 Y 1 A PRO 301 A PRO 301 1 Y 1 A PRO 302 A PRO 302 1 Y 1 A PRO 303 A PRO 303 1 Y 1 A GLU 304 A GLU 304 1 Y 1 A HIS 305 A HIS 305 1 Y 1 A ILE 306 A ILE 306 1 Y 1 A PRO 307 A PRO 307 1 Y 1 A PRO 308 A PRO 308 1 Y 1 A PRO 309 A PRO 309 1 Y 1 A PRO 310 A PRO 310 1 Y 1 A ARG 311 A ARG 311 1 Y 1 A PRO 312 A PRO 312 1 Y 1 A PRO 313 A PRO 313 1 Y 1 A LYS 314 A LYS 314 1 Y 1 A ARG 315 A ARG 315 1 Y 1 A ILE 316 A ILE 316 1 Y 1 A LEU 317 A LEU 317 1 Y 1 A GLU 318 A GLU 318 1 Y 1 A PRO 319 A PRO 319 1 Y 1 A HIS 320 A HIS 320 1 Y 1 A ASN 321 A ASN 321 1 Y 1 A A HD2 O PRO HOH 38 520 1.06 C 1 A A HD2 O PRO HOH 38 520 1.06 D 1 A A HZ1 O LYS HOH 73 503 1.38 C 1 A A HZ1 O LYS HOH 73 503 1.38 D 1 A A OE1 O GLN HOH 61 501 1.56 C 1 A A OE1 O GLN HOH 61 501 1.56 D 1 A A OE2 O GLU HOH 207 502 1.83 A 1 A A O O HOH HOH 722 730 1.85 1 A A O O HOH HOH 671 678 1.86 1 A A NZ O LYS HOH 73 503 1.87 C 1 A A NZ O LYS HOH 73 503 1.87 D 1 A A O O HOH HOH 667 724 1.93 1 A A CD O PRO HOH 38 520 2.02 C 1 A A CD O PRO HOH 38 520 2.02 D 1 A A O O HOH HOH 681 696 2.05 1 A A NZ O LYS HOH 36 504 2.07 C 1 A A NZ O LYS HOH 36 504 2.07 D 1 A A O O HOH HOH 709 711 2.11 1 A A OE2 O GLU HOH 76 505 2.17 C 1 A A OE2 O GLU HOH 76 505 2.17 D 1 A A O O HOH HOH 687 706 2.18 1 A A C N ASP PHE 29 30 1.15 C 1 A A C N ASP PHE 29 30 1.15 D 1 A A C N THR THR 177 178 1.19 C 1 A A C N THR THR 177 178 1.19 D 1 -3.88 0.50 120.30 116.42 A A A NE CZ NH2 ARG ARG ARG 24 24 24 C C C N 1 -3.88 0.50 120.30 116.42 A A A NE CZ NH2 ARG ARG ARG 24 24 24 D D D N 1 -11.89 1.60 122.70 110.81 A A A O C N HIS HIS GLU 25 25 26 C C Y 1 -11.89 1.60 122.70 110.81 A A A O C N HIS HIS GLU 25 25 26 D D Y 1 9.23 1.50 119.30 128.53 A A A C N CA PHE PRO PRO 30 31 31 C C Y 1 9.23 1.50 119.30 128.53 A A A C N CA PHE PRO PRO 30 31 31 D D Y 1 6.64 0.90 118.30 124.94 A A A CB CG OD1 ASP ASP ASP 65 65 65 C C C N 1 6.64 0.90 118.30 124.94 A A A CB CG OD1 ASP ASP ASP 65 65 65 D D D N 1 -11.06 1.70 111.00 99.94 A A A CB CG CD1 LEU LEU LEU 88 88 88 C C C N 1 -11.06 1.70 111.00 99.94 A A A CB CG CD1 LEU LEU LEU 88 88 88 D D D N 1 3.16 0.50 120.30 123.46 A A A NE CZ NH1 ARG ARG ARG 112 112 112 C C C N 1 3.16 0.50 120.30 123.46 A A A NE CZ NH1 ARG ARG ARG 112 112 112 D D D N 1 7.93 1.10 114.20 122.13 A A A CA CB SG CYS CYS CYS 121 121 121 A A A N 1 7.93 1.10 114.20 122.13 A A A CA CB SG CYS CYS CYS 121 121 121 B B B N 1 11.89 1.70 111.00 122.89 A A A CB CG CD2 LEU LEU LEU 144 144 144 C C C N 1 11.89 1.70 111.00 122.89 A A A CB CG CD2 LEU LEU LEU 144 144 144 D D D N 1 3.19 0.50 120.30 123.49 A A A NE CZ NH1 ARG ARG ARG 257 257 257 N 1 A A C N ASP PHE 29 30 -0.185 0.023 1.336 1.151 C Y 1 A A C N ASP PHE 29 30 -0.185 0.023 1.336 1.151 D Y 1 A A C N SER PRO 50 51 -0.115 0.019 1.338 1.223 C Y 1 A A C N SER PRO 50 51 -0.115 0.019 1.338 1.223 D Y 1 A A C N LYS GLU 128 129 0.157 0.023 1.336 1.493 C Y 1 A A C N LYS GLU 128 129 0.157 0.023 1.336 1.493 D Y 1 A A CD OE2 GLU GLU 147 147 -0.069 0.011 1.252 1.183 C C N 1 A A CD OE2 GLU GLU 147 147 -0.069 0.011 1.252 1.183 D D N 1 A A CB CG ASP ASP 148 148 -0.158 0.021 1.513 1.355 C C N 1 A A CB CG ASP ASP 148 148 -0.158 0.021 1.513 1.355 D D N 1 A A C N THR THR 177 178 -0.143 0.023 1.336 1.193 C Y 1 A A C N THR THR 177 178 -0.143 0.023 1.336 1.193 D Y 1 A A C N TRP PRO 179 180 0.131 0.019 1.338 1.469 C Y 1 A A C N TRP PRO 179 180 0.131 0.019 1.338 1.469 D Y 1 A A O O HOH HOH 607 625 1.66 1_555 5_444 1 A LYS 131 A -119.19 79.60 1 A LYS 131 B -119.19 79.60 1 A GLN 166 C 83.36 -3.22 1 A GLN 166 D 83.36 -3.22 1 A CYS 215 A -130.51 -136.16 1 A CYS 215 B -130.51 -136.16 1 A CYS 215 C -129.48 -127.41 1 A CYS 215 D -129.48 -127.41 1 A ILE 219 C -130.33 -38.38 1 A ILE 219 D -130.33 -38.38 1 A ILE 261 73.12 109.76 1 A ILE 261 73.12 109.76 1 A ILE 261 71.67 100.66 1 A ILE 261 71.67 100.66 1 A PHE 280 C -178.88 -58.12 1 A PHE 280 D -178.88 -58.12 1 A ILE 281 C -92.19 47.64 1 A ILE 281 D -92.19 47.64 215.960 40.4113 16.760 0.2209 0.1934 0.1944 1.6620 62.7930 2318 56499 58817 3.9400 99.9200 0.2400 1 THROUGHOUT 1.360 MOLECULAR REPLACEMENT 22.2600 1.2000 1.3000 ML FLAT BULK SOLVENT MODEL 1.6620 62.7930 234 2623 67.89 48.40 84 0 2305 282 0.024 7160 2.015 9844 0.160 984 0.011 1365 19.708 2893 0.4218 0.3863 1.6956 140 3239 3379 17 99.0000 0.3490 0.3448 1.7325 125 3255 3380 17 100.0000 0.3639 0.3083 1.7728 140 3288 3428 17 100.0000 0.2758 0.2698 1.8171 136 3308 3444 17 100.0000 0.2738 0.2389 1.8663 131 3296 3427 17 100.0000 0.2359 0.2166 1.9212 138 3287 3425 17 100.0000 0.2682 0.2110 1.9832 131 3295 3426 17 100.0000 0.2579 0.2154 2.0541 139 3304 3443 17 100.0000 0.2485 0.2157 2.1363 132 3314 3446 17 100.0000 0.2551 0.2004 2.2336 139 3291 3430 17 100.0000 0.2130 0.1960 2.3513 139 3339 3478 17 100.0000 0.1986 0.1838 2.4987 134 3308 3442 17 100.0000 0.1943 0.1811 2.6916 141 3337 3478 17 100.0000 0.2046 0.1855 2.9624 137 3352 3489 17 100.0000 0.1845 0.1851 3.3911 136 3358 3494 17 100.0000 0.2028 0.1706 4.2723 138 3403 3541 17 100.0000 0.2271 0.1852 62.8375 142 3525 3667 17 100.0000 31.250 1.660 62.792 5QFW 112980 -3.000 0.998 0.061 0.067 1.055 1 12.270 557587 99.900 0.960 1.660 1.760 1.150 73087 18269 18207 0.531 1.109 1 0 99.700 0.492 1.760 1.880 2.580 76788 17155 17153 0.857 0.559 1 0 100.000 0.259 1.880 2.030 5.570 83884 16030 16027 0.965 0.288 1 0 100.000 0.140 2.030 2.230 9.890 77407 14738 14738 0.986 0.156 1 0 100.000 0.092 2.230 2.490 14.450 69085 13326 13324 0.993 0.103 1 0 100.000 0.067 2.490 2.880 19.990 62330 11710 11709 0.996 0.075 1 0 100.000 0.052 2.880 3.520 26.730 52320 9905 9902 0.997 0.057 1 0 100.000 0.045 3.520 4.970 32.440 40063 7706 7703 0.997 0.050 1 0 100.000 0.046 4.970 62.792 34.270 22623 4220 4217 0.997 0.051 1 0 99.900 refinement Paul D. Adams PDAdams@lbl.gov C++ http://www.phenix-online.org/ PHENIX package 1.10.1_2155 data scaling Wolfgang Kabsch http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html XSCALE package phasing Randy J. Read cimr-phaser@lists.cam.ac.uk http://www-structmed.cimr.cam.ac.uk/phaser/ PHASER program data extraction PDB deposit@deposit.rcsb.org July. 13, 2016 C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ PDB_EXTRACT package 3.22 data reduction Wolfgang Kabsch http://homes.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xds_program.html XDS package Tyrosine-protein phosphatase non-receptor type 1 (E.C.3.1.3.48) PanDDA analysis group deposition -- Crystal structure of PTP1B in complex with compound_FMOOA000497a 1 N N 2 N N 3 N N 4 N N A GLU 2 A GLU 2 HELX_P A GLY 14 A GLY 14 1 AA1 13 A SER 15 A SER 15 HELX_P A ALA 27 A ALA 27 1 AA2 13 A LEU 37 A LEU 37 HELX_P A ASN 44 A ASN 44 5 AA3 8 A THR 91 A THR 91 HELX_P A GLN 102 A GLN 102 1 AA4 12 A PRO 188 A PRO 188 HELX_P A SER 201 A SER 201 1 AA5 14 A GLY 220 A GLY 220 HELX_P A ARG 238 A ARG 238 1 AA6 19 A ASP 240 A ASP 240 HELX_P A VAL 244 A VAL 244 5 AA7 5 A ASP 245 A ASP 245 HELX_P A ARG 254 A ARG 254 1 AA8 10 A THR 263 A THR 263 HELX_P A ILE 281 A ILE 281 1 AA9 19 covale 1.508 none C C A THR 165 A CB THR 165 1_555 A GLU 167 A OE1 GLU 167 1_555 covale 1.508 none D D A THR 165 A CB THR 165 1_555 A GLU 167 A OE1 GLU 167 1_555 HYDROLASE PanDDA, SGC - Diamond I04-1 fragment screening, protein tyrosine phosphatase, PTP, protein tyrosine phosphatase 1B, PTP1B, enzyme, allostery, multiconformer, HYDROLASE PTN1_HUMAN UNP 1 1 P18031 MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRS YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKD PSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPH N 1 321 5QFW 1 321 P18031 A 1 1 321 1 CYS engineered mutation SER 32 5QFW A P18031 UNP 32 32 1 CYS engineered mutation VAL 92 5QFW A P18031 UNP 92 92 9 2 anti-parallel anti-parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 56 A ARG 56 A LYS 58 A LYS 58 A TYR 66 A TYR 66 A MET 74 A MET 74 A ARG 79 A ARG 79 A THR 84 A THR 84 A VAL 211 A VAL 211 A HIS 214 A HIS 214 A GLY 106 A GLY 106 A MET 109 A MET 109 A THR 168 A THR 168 A TYR 176 A TYR 176 A TYR 153 A TYR 153 A ASN 162 A ASN 162 A LEU 140 A LEU 140 A ILE 149 A ILE 149 A MET 133 A MET 133 A PHE 135 A PHE 135 A MET 114 A MET 114 A GLU 115 A GLU 115 A SER 118 A SER 118 A LEU 119 A LEU 119 binding site for residue JKA A 401 A JKA 401 Software 5 binding site for residue TRS A 402 A TRS 402 Software 5 A GLY 14 A GLY 14 5 1_555 A SER 15 A SER 15 5 1_555 A TRP 16 A TRP 16 5 1_555 A ALA 17 A ALA 17 5 1_555 A ASP 265 A ASP 265 5 1_555 A HIS 54 A HIS 54 5 1_555 A LYS 128 A LYS 128 5 5_444 A GLU 129 A GLU 129 5 5_444 A GLU 130 A GLU 130 5 5_444 A HOH 608 D HOH 5 1_555 152 P 31 2 1