0.016194 0.000000 0.000000 0.000000 0.007729 0.000000 0.000000 0.000000 0.007701 0.00000 0.00000 0.00000 Rai, A. Oprisko, A. Campos, J. Fu, Y. Friese, T. Goody, R.S. Mueller, M.P. Gazdag, E.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 61.750 129.380 129.850 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C10 H17 N6 O13 P3 522.196 PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N P N 138 N O N 139 N O N 140 N O N 141 N N N 142 R P N 143 N O N 144 N O N 145 N O N 146 S P N 147 N O N 148 N O N 149 N O N 150 N C N 151 R C N 152 N O N 153 S C N 154 N O N 155 R C N 156 N O N 157 R C Y 158 N N Y 159 N C Y 160 N N Y 161 N C Y 162 N C N 163 N O Y 164 N N Y 165 N C N 166 N N Y 167 N N Y 168 N C N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C Y 191 N C Y 192 N N Y 193 N C Y 194 N C Y 195 N N N 196 N O N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N O N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 S C N 215 N C N 216 N C N 217 N C N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 N C N 237 N C N 238 N C N 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N C N 262 N N N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N N N 280 S C N 281 N C N 282 N O N 283 N C N 284 N C N 285 N S N 286 N C N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N MG N 300 N N N 301 S C N 302 N C N 303 N O N 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C Y 309 N C Y 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C N 328 N C N 329 N C N 330 N O N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N N N 355 S C N 356 N C N 357 N O N 358 R C N 359 N O N 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N N N 372 S C N 373 N C N 374 N O N 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N N Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C N 385 N O N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 N C Y 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N C N 409 N O N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N N N 423 S C N 424 N C N 425 N O N 426 N C N 427 N C N 428 N C N 429 N O N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing Y 164 N sing Y 165 N sing Y 166 N doub N 167 N sing Y 168 N sing Y 169 N sing Y 170 N doub N 171 N doub Y 172 N sing Y 173 N sing N 174 N sing N 175 N sing Y 176 N doub N 177 N sing N 178 N sing Y 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing Y 191 N sing Y 192 N doub Y 193 N doub N 194 N sing Y 195 N sing N 196 N sing Y 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing Y 299 N doub Y 300 N sing Y 301 N sing N 302 N sing Y 303 N doub N 304 N sing Y 305 N doub N 306 N sing Y 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N doub Y 369 N sing Y 370 N sing N 371 N sing Y 372 N doub Y 373 N sing Y 374 N sing N 375 N sing Y 376 N sing Y 377 N doub N 378 N sing Y 379 N doub N 380 N sing Y 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub N 401 N sing Y 402 N doub N 403 N sing Y 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing US Elife 2050-084X 5 10.7554/eLife.18675 27552051 bMERB domains are bivalent Rab8 family effectors evolved by gene duplication. 2016 10.2210/pdb5szh/pdb pdb_00005szh 100 1 PIXEL 2015-02-16 DECTRIS PILATUS 6M SINGLE WAVELENGTH M x-ray 1 0.9999 1.0 X10SA SLS 0.9999 SYNCHROTRON SLS BEAMLINE X10SA 18469.699 MICAL C-terminal-like protein 1 man polymer 22391.330 Ras-related protein Rab-1B 1 man polymer 522.196 PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 1 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 27 nat water ERK2-binding testicular protein 1,Ebitein-1 no no GHMKQEELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALRGEADSGTQDEAQLLQEWFKLVLEKNKLMRYESELLIM AQELELEDHQSRLEQKLREKMLKEESQKDEKDLNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQHFES GHMKQEELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALRGEADSGTQDEAQLLQEWFKLVLEKNKLMRYESELLIM AQELELEDHQSRLEQKLREKMLKEESQKDEKDLNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQHFES A polypeptide(L) no no GHMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYY RGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNV EQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC GHMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYY RGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNV EQAFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 153 MICALCL 9606 Homo sapiens 562 Escherichia coli Biological sequence Human sample 1 203 RAB1B 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 3.17 61.24 VAPOR DIFFUSION, HANGING DROP 20-22% PEG3350 0.1M bis-Tris Propane 0.2M tri-Sodium Citrate 8.4-8.6 293 pdbx_audit_support atom_site chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn repository Initial release Database references Database references Author supporting evidence Atomic model Data collection Database references Derived calculations Refinement description 1 0 2016-08-24 1 1 2016-09-07 1 2 2016-09-14 1 3 2017-09-06 2 0 2024-01-17 _pdbx_audit_support.funding_organization _atom_site.occupancy _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr2_auth_seq_id Germany German Research Foundation SFB 642, grant A4 Germany Max Planck Society N RCSB Y PDBE 2016-08-14 REL REL GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER MG MAGNESIUM ION HOH water 3NKV 3NKV, 5SZG PDB experimental model 5SZG 3NKV, 5SZG PDB experimental model GNP 302 3 GNP GNP 301 B MG 1 4 MG MG 302 B HOH 10 5 HOH HOH 701 A HOH 14 5 HOH HOH 702 A HOH 28 5 HOH HOH 703 A HOH 9 5 HOH HOH 704 A HOH 26 5 HOH HOH 705 A HOH 27 5 HOH HOH 706 A HOH 12 5 HOH HOH 401 B HOH 18 5 HOH HOH 402 B HOH 20 5 HOH HOH 403 B HOH 4 5 HOH HOH 404 B HOH 5 5 HOH HOH 405 B HOH 2 5 HOH HOH 406 B HOH 22 5 HOH HOH 407 B HOH 15 5 HOH HOH 408 B HOH 16 5 HOH HOH 409 B HOH 3 5 HOH HOH 410 B HOH 8 5 HOH HOH 411 B HOH 21 5 HOH HOH 412 B HOH 7 5 HOH HOH 413 B HOH 19 5 HOH HOH 414 B HOH 6 5 HOH HOH 415 B HOH 17 5 HOH HOH 416 B HOH 11 5 HOH HOH 417 B HOH 23 5 HOH HOH 418 B HOH 24 5 HOH HOH 419 B HOH 25 5 HOH HOH 420 B HOH 13 5 HOH HOH 421 B GLY 531 n 1 GLY 531 A HIS 532 n 2 HIS 532 A MET 533 n 3 MET 533 A LYS 534 n 4 LYS 534 A GLN 535 n 5 GLN 535 A GLU 536 n 6 GLU 536 A GLU 537 n 7 GLU 537 A LEU 538 n 8 LEU 538 A LYS 539 n 9 LYS 539 A ARG 540 n 10 ARG 540 A LEU 541 n 11 LEU 541 A TYR 542 n 12 TYR 542 A LYS 543 n 13 LYS 543 A ALA 544 n 14 ALA 544 A GLN 545 n 15 GLN 545 A ALA 546 n 16 ALA 546 A ILE 547 n 17 ILE 547 A GLN 548 n 18 GLN 548 A ARG 549 n 19 ARG 549 A GLN 550 n 20 GLN 550 A LEU 551 n 21 LEU 551 A GLU 552 n 22 GLU 552 A GLU 553 n 23 GLU 553 A VAL 554 n 24 VAL 554 A GLU 555 n 25 GLU 555 A GLU 556 n 26 GLU 556 A ARG 557 n 27 ARG 557 A GLN 558 n 28 GLN 558 A ARG 559 n 29 ARG 559 A ALA 560 n 30 ALA 560 A SER 561 n 31 SER 561 A GLU 562 n 32 GLU 562 A ILE 563 n 33 ILE 563 A GLN 564 n 34 GLN 564 A GLY 565 n 35 GLY 565 A VAL 566 n 36 VAL 566 A ARG 567 n 37 ARG 567 A LEU 568 n 38 LEU 568 A GLU 569 n 39 GLU 569 A LYS 570 n 40 LYS 570 A ALA 571 n 41 ALA 571 A LEU 572 n 42 LEU 572 A ARG 573 n 43 ARG 573 A GLY 574 n 44 GLY 574 A GLU 575 n 45 GLU 575 A n 46 576 A n 47 577 A n 48 578 A n 49 579 A n 50 580 A GLN 581 n 51 GLN 581 A ASP 582 n 52 ASP 582 A GLU 583 n 53 GLU 583 A ALA 584 n 54 ALA 584 A GLN 585 n 55 GLN 585 A LEU 586 n 56 LEU 586 A LEU 587 n 57 LEU 587 A GLN 588 n 58 GLN 588 A GLU 589 n 59 GLU 589 A TRP 590 n 60 TRP 590 A PHE 591 n 61 PHE 591 A LYS 592 n 62 LYS 592 A LEU 593 n 63 LEU 593 A VAL 594 n 64 VAL 594 A LEU 595 n 65 LEU 595 A GLU 596 n 66 GLU 596 A LYS 597 n 67 LYS 597 A ASN 598 n 68 ASN 598 A LYS 599 n 69 LYS 599 A LEU 600 n 70 LEU 600 A MET 601 n 71 MET 601 A ARG 602 n 72 ARG 602 A TYR 603 n 73 TYR 603 A GLU 604 n 74 GLU 604 A SER 605 n 75 SER 605 A GLU 606 n 76 GLU 606 A LEU 607 n 77 LEU 607 A LEU 608 n 78 LEU 608 A ILE 609 n 79 ILE 609 A MET 610 n 80 MET 610 A ALA 611 n 81 ALA 611 A GLN 612 n 82 GLN 612 A GLU 613 n 83 GLU 613 A LEU 614 n 84 LEU 614 A GLU 615 n 85 GLU 615 A LEU 616 n 86 LEU 616 A GLU 617 n 87 GLU 617 A ASP 618 n 88 ASP 618 A HIS 619 n 89 HIS 619 A GLN 620 n 90 GLN 620 A SER 621 n 91 SER 621 A ARG 622 n 92 ARG 622 A LEU 623 n 93 LEU 623 A GLU 624 n 94 GLU 624 A GLN 625 n 95 GLN 625 A LYS 626 n 96 LYS 626 A LEU 627 n 97 LEU 627 A ARG 628 n 98 ARG 628 A GLU 629 n 99 GLU 629 A LYS 630 n 100 LYS 630 A MET 631 n 101 MET 631 A LEU 632 n 102 LEU 632 A LYS 633 n 103 LYS 633 A GLU 634 n 104 GLU 634 A GLU 635 n 105 GLU 635 A SER 636 n 106 SER 636 A GLN 637 n 107 GLN 637 A LYS 638 n 108 LYS 638 A ASP 639 n 109 ASP 639 A GLU 640 n 110 GLU 640 A LYS 641 n 111 LYS 641 A ASP 642 n 112 ASP 642 A LEU 643 n 113 LEU 643 A ASN 644 n 114 ASN 644 A GLU 645 n 115 GLU 645 A GLU 646 n 116 GLU 646 A GLN 647 n 117 GLN 647 A GLU 648 n 118 GLU 648 A VAL 649 n 119 VAL 649 A PHE 650 n 120 PHE 650 A THR 651 n 121 THR 651 A GLU 652 n 122 GLU 652 A LEU 653 n 123 LEU 653 A MET 654 n 124 MET 654 A GLN 655 n 125 GLN 655 A VAL 656 n 126 VAL 656 A ILE 657 n 127 ILE 657 A GLU 658 n 128 GLU 658 A GLN 659 n 129 GLN 659 A ARG 660 n 130 ARG 660 A ASP 661 n 131 ASP 661 A LYS 662 n 132 LYS 662 A LEU 663 n 133 LEU 663 A VAL 664 n 134 VAL 664 A ASP 665 n 135 ASP 665 A SER 666 n 136 SER 666 A LEU 667 n 137 LEU 667 A GLU 668 n 138 GLU 668 A GLU 669 n 139 GLU 669 A GLN 670 n 140 GLN 670 A ARG 671 n 141 ARG 671 A ILE 672 n 142 ILE 672 A ARG 673 n 143 ARG 673 A GLU 674 n 144 GLU 674 A LYS 675 n 145 LYS 675 A ALA 676 n 146 ALA 676 A GLU 677 n 147 GLU 677 A ASP 678 n 148 ASP 678 A n 149 679 A n 150 680 A n 151 681 A n 152 682 A n 153 683 A GLY -1 n 1 GLY -1 B HIS 0 n 2 HIS 0 B MET 1 n 3 MET 1 B ASN 2 n 4 ASN 2 B PRO 3 n 5 PRO 3 B GLU 4 n 6 GLU 4 B TYR 5 n 7 TYR 5 B ASP 6 n 8 ASP 6 B TYR 7 n 9 TYR 7 B LEU 8 n 10 LEU 8 B PHE 9 n 11 PHE 9 B LYS 10 n 12 LYS 10 B LEU 11 n 13 LEU 11 B LEU 12 n 14 LEU 12 B LEU 13 n 15 LEU 13 B ILE 14 n 16 ILE 14 B GLY 15 n 17 GLY 15 B ASP 16 n 18 ASP 16 B SER 17 n 19 SER 17 B GLY 18 n 20 GLY 18 B VAL 19 n 21 VAL 19 B GLY 20 n 22 GLY 20 B LYS 21 n 23 LYS 21 B SER 22 n 24 SER 22 B CYS 23 n 25 CYS 23 B LEU 24 n 26 LEU 24 B LEU 25 n 27 LEU 25 B LEU 26 n 28 LEU 26 B ARG 27 n 29 ARG 27 B PHE 28 n 30 PHE 28 B ALA 29 n 31 ALA 29 B ASP 30 n 32 ASP 30 B ASP 31 n 33 ASP 31 B THR 32 n 34 THR 32 B TYR 33 n 35 TYR 33 B THR 34 n 36 THR 34 B GLU 35 n 37 GLU 35 B SER 36 n 38 SER 36 B TYR 37 n 39 TYR 37 B ILE 38 n 40 ILE 38 B SER 39 n 41 SER 39 B THR 40 n 42 THR 40 B ILE 41 n 43 ILE 41 B GLY 42 n 44 GLY 42 B VAL 43 n 45 VAL 43 B ASP 44 n 46 ASP 44 B PHE 45 n 47 PHE 45 B LYS 46 n 48 LYS 46 B ILE 47 n 49 ILE 47 B ARG 48 n 50 ARG 48 B THR 49 n 51 THR 49 B ILE 50 n 52 ILE 50 B GLU 51 n 53 GLU 51 B LEU 52 n 54 LEU 52 B ASP 53 n 55 ASP 53 B GLY 54 n 56 GLY 54 B LYS 55 n 57 LYS 55 B THR 56 n 58 THR 56 B ILE 57 n 59 ILE 57 B LYS 58 n 60 LYS 58 B LEU 59 n 61 LEU 59 B GLN 60 n 62 GLN 60 B ILE 61 n 63 ILE 61 B TRP 62 n 64 TRP 62 B ASP 63 n 65 ASP 63 B THR 64 n 66 THR 64 B ALA 65 n 67 ALA 65 B GLY 66 n 68 GLY 66 B GLN 67 n 69 GLN 67 B GLU 68 n 70 GLU 68 B ARG 69 n 71 ARG 69 B PHE 70 n 72 PHE 70 B ARG 71 n 73 ARG 71 B THR 72 n 74 THR 72 B ILE 73 n 75 ILE 73 B THR 74 n 76 THR 74 B SER 75 n 77 SER 75 B SER 76 n 78 SER 76 B TYR 77 n 79 TYR 77 B TYR 78 n 80 TYR 78 B ARG 79 n 81 ARG 79 B GLY 80 n 82 GLY 80 B ALA 81 n 83 ALA 81 B HIS 82 n 84 HIS 82 B GLY 83 n 85 GLY 83 B ILE 84 n 86 ILE 84 B ILE 85 n 87 ILE 85 B VAL 86 n 88 VAL 86 B VAL 87 n 89 VAL 87 B TYR 88 n 90 TYR 88 B ASP 89 n 91 ASP 89 B VAL 90 n 92 VAL 90 B THR 91 n 93 THR 91 B ASP 92 n 94 ASP 92 B GLN 93 n 95 GLN 93 B GLU 94 n 96 GLU 94 B SER 95 n 97 SER 95 B TYR 96 n 98 TYR 96 B ALA 97 n 99 ALA 97 B ASN 98 n 100 ASN 98 B VAL 99 n 101 VAL 99 B LYS 100 n 102 LYS 100 B GLN 101 n 103 GLN 101 B TRP 102 n 104 TRP 102 B LEU 103 n 105 LEU 103 B GLN 104 n 106 GLN 104 B GLU 105 n 107 GLU 105 B ILE 106 n 108 ILE 106 B ASP 107 n 109 ASP 107 B ARG 108 n 110 ARG 108 B TYR 109 n 111 TYR 109 B ALA 110 n 112 ALA 110 B SER 111 n 113 SER 111 B GLU 112 n 114 GLU 112 B ASN 113 n 115 ASN 113 B VAL 114 n 116 VAL 114 B ASN 115 n 117 ASN 115 B LYS 116 n 118 LYS 116 B LEU 117 n 119 LEU 117 B LEU 118 n 120 LEU 118 B VAL 119 n 121 VAL 119 B GLY 120 n 122 GLY 120 B ASN 121 n 123 ASN 121 B LYS 122 n 124 LYS 122 B SER 123 n 125 SER 123 B ASP 124 n 126 ASP 124 B LEU 125 n 127 LEU 125 B THR 126 n 128 THR 126 B THR 127 n 129 THR 127 B LYS 128 n 130 LYS 128 B LYS 129 n 131 LYS 129 B VAL 130 n 132 VAL 130 B VAL 131 n 133 VAL 131 B ASP 132 n 134 ASP 132 B ASN 133 n 135 ASN 133 B THR 134 n 136 THR 134 B THR 135 n 137 THR 135 B ALA 136 n 138 ALA 136 B LYS 137 n 139 LYS 137 B GLU 138 n 140 GLU 138 B PHE 139 n 141 PHE 139 B ALA 140 n 142 ALA 140 B ASP 141 n 143 ASP 141 B SER 142 n 144 SER 142 B LEU 143 n 145 LEU 143 B GLY 144 n 146 GLY 144 B ILE 145 n 147 ILE 145 B PRO 146 n 148 PRO 146 B PHE 147 n 149 PHE 147 B LEU 148 n 150 LEU 148 B GLU 149 n 151 GLU 149 B THR 150 n 152 THR 150 B SER 151 n 153 SER 151 B ALA 152 n 154 ALA 152 B LYS 153 n 155 LYS 153 B ASN 154 n 156 ASN 154 B ALA 155 n 157 ALA 155 B THR 156 n 158 THR 156 B ASN 157 n 159 ASN 157 B VAL 158 n 160 VAL 158 B GLU 159 n 161 GLU 159 B GLN 160 n 162 GLN 160 B ALA 161 n 163 ALA 161 B PHE 162 n 164 PHE 162 B MET 163 n 165 MET 163 B THR 164 n 166 THR 164 B MET 165 n 167 MET 165 B ALA 166 n 168 ALA 166 B ALA 167 n 169 ALA 167 B GLU 168 n 170 GLU 168 B ILE 169 n 171 ILE 169 B LYS 170 n 172 LYS 170 B LYS 171 n 173 LYS 171 B ARG 172 n 174 ARG 172 B MET 173 n 175 MET 173 B n 176 174 B n 177 175 B n 178 176 B n 179 177 B n 180 178 B n 181 179 B n 182 180 B n 183 181 B n 184 182 B n 185 183 B n 186 184 B n 187 185 B n 188 186 B n 189 187 B n 190 188 B n 191 189 B n 192 190 B n 193 191 B n 194 192 B n 195 193 B n 196 194 B n 197 195 B n 198 196 B n 199 197 B n 200 198 B n 201 199 B n 202 200 B n 203 201 B 2.2720 0.4150 0.7941 0.5638 0.3947 3.3723 0.0575 -0.0391 -0.1618 -0.0043 0.0110 -0.0393 0.2484 -0.1884 -0.0808 0.4406 0.0002 0.0158 0.4799 0.0303 0.4519 refined -30.0648 -34.0777 -47.8184 X-RAY DIFFRACTION 3.0898 -1.0080 -0.3198 4.1920 0.6717 2.2212 -0.0036 0.0735 0.1627 -0.0196 0.0002 -0.1066 -0.0651 0.2454 0.0063 0.4279 -0.0009 -0.0502 0.4191 0.0528 0.4786 refined -21.5022 -11.1242 -31.6661 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 (chain A and resid 531:678) X-RAY DIFFRACTION 2 (chain B and resid 0:174) software_defined_assembly PISA 2 dimeric 3290 -26 17650 B SER 22 B OG SER 24 1_555 B MG 302 D MG MG 1_555 B THR 40 B OG1 THR 42 1_555 79.9 B SER 22 B OG SER 24 1_555 B MG 302 D MG MG 1_555 B GNP 301 C O1G GNP 1_555 167.1 B THR 40 B OG1 THR 42 1_555 B MG 302 D MG MG 1_555 B GNP 301 C O1G GNP 1_555 91.4 B SER 22 B OG SER 24 1_555 B MG 302 D MG MG 1_555 B GNP 301 C O1B GNP 1_555 99.3 B THR 40 B OG1 THR 42 1_555 B MG 302 D MG MG 1_555 B GNP 301 C O1B GNP 1_555 177.4 B GNP 301 C O1G GNP 1_555 B MG 302 D MG MG 1_555 B GNP 301 C O1B GNP 1_555 89.0 B SER 22 B OG SER 24 1_555 B MG 302 D MG MG 1_555 B HOH 404 F O HOH 1_555 93.8 B THR 40 B OG1 THR 42 1_555 B MG 302 D MG MG 1_555 B HOH 404 F O HOH 1_555 83.9 B GNP 301 C O1G GNP 1_555 B MG 302 D MG MG 1_555 B HOH 404 F O HOH 1_555 94.8 B GNP 301 C O1B GNP 1_555 B MG 302 D MG MG 1_555 B HOH 404 F O HOH 1_555 98.6 B SER 22 B OG SER 24 1_555 B MG 302 D MG MG 1_555 B HOH 410 F O HOH 1_555 86.2 B THR 40 B OG1 THR 42 1_555 B MG 302 D MG MG 1_555 B HOH 410 F O HOH 1_555 88.1 B GNP 301 C O1G GNP 1_555 B MG 302 D MG MG 1_555 B HOH 410 F O HOH 1_555 83.9 B GNP 301 C O1B GNP 1_555 B MG 302 D MG MG 1_555 B HOH 410 F O HOH 1_555 89.4 B HOH 404 F O HOH 1_555 B MG 302 D MG MG 1_555 B HOH 410 F O HOH 1_555 171.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 B N ILE 50 B N ILE 52 B O ILE 57 B O ILE 59 B O TRP 62 B O TRP 64 B N LEU 11 B N LEU 13 B N LEU 12 B N LEU 14 B O ILE 85 B O ILE 87 B N TYR 88 B N TYR 90 B O ASN 121 B O ASN 123 B N LEU 118 B N LEU 120 B O LEU 148 B O LEU 150 1 B HOH 401 F HOH 1 B HOH 413 F HOH 1 A CG ARG 559 A CG ARG 29 1 Y 1 A CD ARG 559 A CD ARG 29 1 Y 1 A NE ARG 559 A NE ARG 29 1 Y 1 A CZ ARG 559 A CZ ARG 29 1 Y 1 A NH1 ARG 559 A NH1 ARG 29 1 Y 1 A NH2 ARG 559 A NH2 ARG 29 1 Y 1 A CG ARG 567 A CG ARG 37 1 Y 1 A CD ARG 567 A CD ARG 37 1 Y 1 A NE ARG 567 A NE ARG 37 1 Y 1 A CZ ARG 567 A CZ ARG 37 1 Y 1 A NH1 ARG 567 A NH1 ARG 37 1 Y 1 A NH2 ARG 567 A NH2 ARG 37 1 Y 1 A CG LYS 570 A CG LYS 40 1 Y 1 A CD LYS 570 A CD LYS 40 1 Y 1 A CE LYS 570 A CE LYS 40 1 Y 1 A NZ LYS 570 A NZ LYS 40 1 Y 1 A CG ARG 573 A CG ARG 43 1 Y 1 A CD ARG 573 A CD ARG 43 1 Y 1 A NE ARG 573 A NE ARG 43 1 Y 1 A CZ ARG 573 A CZ ARG 43 1 Y 1 A NH1 ARG 573 A NH1 ARG 43 1 Y 1 A NH2 ARG 573 A NH2 ARG 43 1 Y 1 A CG GLN 581 A CG GLN 51 1 Y 1 A CD GLN 581 A CD GLN 51 1 Y 1 A OE1 GLN 581 A OE1 GLN 51 1 Y 1 A NE2 GLN 581 A NE2 GLN 51 1 Y 1 A CG GLN 637 A CG GLN 107 1 Y 1 A CD GLN 637 A CD GLN 107 1 Y 1 A OE1 GLN 637 A OE1 GLN 107 1 Y 1 A NE2 GLN 637 A NE2 GLN 107 1 Y 1 A CG LYS 675 A CG LYS 145 1 Y 1 A CD LYS 675 A CD LYS 145 1 Y 1 A CE LYS 675 A CE LYS 145 1 Y 1 A NZ LYS 675 A NZ LYS 145 1 Y 1 A CG GLU 677 A CG GLU 147 1 Y 1 A CD GLU 677 A CD GLU 147 1 Y 1 A OE1 GLU 677 A OE1 GLU 147 1 Y 1 A OE2 GLU 677 A OE2 GLU 147 1 Y 1 A CG ASP 678 A CG ASP 148 1 Y 1 A OD1 ASP 678 A OD1 ASP 148 1 Y 1 A OD2 ASP 678 A OD2 ASP 148 1 Y 1 B CG LYS 100 B CG LYS 102 1 Y 1 B CD LYS 100 B CD LYS 102 1 Y 1 B CE LYS 100 B CE LYS 102 1 Y 1 B NZ LYS 100 B NZ LYS 102 1 Y 1 B CG GLU 112 B CG GLU 114 1 Y 1 B CD GLU 112 B CD GLU 114 1 Y 1 B OE1 GLU 112 B OE1 GLU 114 1 Y 1 B OE2 GLU 112 B OE2 GLU 114 1 Y 1 B CG LYS 128 B CG LYS 130 1 Y 1 B CD LYS 128 B CD LYS 130 1 Y 1 B CE LYS 128 B CE LYS 130 1 Y 1 B NZ LYS 128 B NZ LYS 130 1 Y 1 B CG MET 173 B CG MET 175 1 Y 1 B SD MET 173 B SD MET 175 1 Y 1 B CE MET 173 B CE MET 175 1 Y 1 A ALA 576 A ALA 46 1 Y 1 A ASP 577 A ASP 47 1 Y 1 A SER 578 A SER 48 1 Y 1 A GLY 579 A GLY 49 1 Y 1 A THR 580 A THR 50 1 Y 1 A GLN 679 A GLN 149 1 Y 1 A HIS 680 A HIS 150 1 Y 1 A PHE 681 A PHE 151 1 Y 1 A GLU 682 A GLU 152 1 Y 1 A SER 683 A SER 153 1 Y 1 B GLY 174 B GLY 176 1 Y 1 B PRO 175 B PRO 177 1 Y 1 B GLY 176 B GLY 178 1 Y 1 B ALA 177 B ALA 179 1 Y 1 B ALA 178 B ALA 180 1 Y 1 B SER 179 B SER 181 1 Y 1 B GLY 180 B GLY 182 1 Y 1 B GLY 181 B GLY 183 1 Y 1 B GLU 182 B GLU 184 1 Y 1 B ARG 183 B ARG 185 1 Y 1 B PRO 184 B PRO 186 1 Y 1 B ASN 185 B ASN 187 1 Y 1 B LEU 186 B LEU 188 1 Y 1 B LYS 187 B LYS 189 1 Y 1 B ILE 188 B ILE 190 1 Y 1 B ASP 189 B ASP 191 1 Y 1 B SER 190 B SER 192 1 Y 1 B THR 191 B THR 193 1 Y 1 B PRO 192 B PRO 194 1 Y 1 B VAL 193 B VAL 195 1 Y 1 B LYS 194 B LYS 196 1 Y 1 B PRO 195 B PRO 197 1 Y 1 B ALA 196 B ALA 198 1 Y 1 B GLY 197 B GLY 199 1 Y 1 B GLY 198 B GLY 200 1 Y 1 B GLY 199 B GLY 201 1 Y 1 B CYS 200 B CYS 202 1 Y 1 B CYS 201 B CYS 203 1 Y 1 B LYS 122 73.33 41.86 1 B ALA 155 78.64 -4.04 0.2073 0.1792 0.1807 2.300 45.826 1176 23530 5.00 99.94 0.24 1 FREE R-VALUE MOLECULAR REPLACEMENT 25.09 0.90 1.11 3NKV, 5SZG 2.300 45.826 27 2612 33 0 2552 0.008 2615 1.104 3523 15.683 998 0.040 396 0.004 451 0.2979 0.2694 2.4048 144 2732 100.00 0.2599 0.2490 2.5315 144 2739 100.00 0.2771 0.2238 2.6901 145 2778 100.00 0.2668 0.2200 2.8978 145 2755 100.00 0.2679 0.2126 3.1893 147 2778 100.00 0.2433 0.1826 3.6507 147 2792 100.00 0.1523 0.1488 4.5988 149 2843 100.00 0.1799 0.1619 45.8347 155 2928 100.00 2.3 45.83 5SZH 23533 0.105 0.109 1 16.27 13.1 100 0.74 2.3 2.4 3.89 0.692 1 13.4 100 refinement PHENIX 1.9_1692 data reduction XDS data scaling XDS phasing PHASER N Structure of human Rab1b in complex with the bMERB domain of Mical-cL 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N A GLY 531 A GLY 1 HELX_P A ARG 573 A ARG 43 1 AA1 43 A ASP 582 A ASP 52 HELX_P A LYS 633 A LYS 103 1 AA2 52 A GLU 634 A GLU 104 HELX_P A LYS 638 A LYS 108 5 AA3 5 A ASP 639 A ASP 109 HELX_P A ASP 678 A ASP 148 1 AA4 40 B GLY 20 B GLY 22 HELX_P B ASP 31 B ASP 33 1 AA5 12 B GLN 67 B GLN 69 HELX_P B ARG 69 B ARG 71 5 AA6 3 B PHE 70 B PHE 72 HELX_P B SER 76 B SER 78 1 AA7 7 B ASP 92 B ASP 94 HELX_P B ASN 98 B ASN 100 1 AA8 7 B ASN 98 B ASN 100 HELX_P B ALA 110 B ALA 112 1 AA9 13 B LEU 125 B LEU 127 HELX_P B LYS 129 B LYS 131 5 AB1 5 B ASP 132 B ASP 134 HELX_P B LEU 143 B LEU 145 1 AB2 12 B ASN 157 B ASN 159 HELX_P B MET 173 B MET 175 1 AB3 17 metalc 2.039 B SER 22 B OG SER 24 1_555 B MG 302 D MG MG 1_555 metalc 2.121 B THR 40 B OG1 THR 42 1_555 B MG 302 D MG MG 1_555 metalc 2.021 B GNP 301 C O1G GNP 1_555 B MG 302 D MG MG 1_555 metalc 2.040 B GNP 301 C O1B GNP 1_555 B MG 302 D MG MG 1_555 metalc 2.074 B MG 302 D MG MG 1_555 B HOH 404 F O HOH 1_555 metalc 2.119 B MG 302 D MG MG 1_555 B HOH 410 F O HOH 1_555 ENDOCYTOSIS Mical-cL, DUF3585, Mical, Rab effector, Rab1b, protein transport, endocytosis MICLK_HUMAN UNP 1 534 Q6ZW33 KQEELKRLYKAQAIQRQLEEVEERQRASEIQGVRLEKALRGEADSGTQDEAQLLQEWFKLVLEKNKLMRYESELLIMAQE LELEDHQSRLEQKLREKMLKEESQKDEKDLNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAEDQHFES RAB1B_HUMAN UNP 2 1 Q9H0U4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRG AHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQ AFMTMAAEIKKRMGPGAASGGERPNLKIDSTPVKPAGGGCC 534 683 5SZH 534 683 Q6ZW33 A 1 4 153 1 201 5SZH 1 201 Q9H0U4 B 2 3 203 1 expression tag GLY 531 5SZH A Q6ZW33 UNP 1 1 expression tag HIS 532 5SZH A Q6ZW33 UNP 2 1 expression tag MET 533 5SZH A Q6ZW33 UNP 3 2 expression tag GLY -1 5SZH B Q9H0U4 UNP 1 2 expression tag HIS 0 5SZH B Q9H0U4 UNP 2 6 anti-parallel parallel parallel parallel parallel B VAL 43 B VAL 45 B LEU 52 B LEU 54 B LYS 55 B LYS 57 B THR 64 B THR 66 B TYR 7 B TYR 9 B GLY 15 B GLY 17 B GLY 83 B GLY 85 B ASP 89 B ASP 91 B ASN 115 B ASN 117 B ASN 121 B ASN 123 B PHE 147 B PHE 149 B GLU 149 B GLU 151 binding site for residue GNP B 301 B GNP 301 Software 25 binding site for residue MG B 302 B MG 302 Software 5 B SER 17 B SER 19 25 1_555 B GLY 18 B GLY 20 25 1_555 B VAL 19 B VAL 21 25 1_555 B GLY 20 B GLY 22 25 1_555 B LYS 21 B LYS 23 25 1_555 B SER 22 B SER 24 25 1_555 B CYS 23 B CYS 25 25 1_555 B TYR 33 B TYR 35 25 1_555 B THR 34 B THR 36 25 1_555 B GLU 35 B GLU 37 25 1_555 B TYR 37 B TYR 39 25 1_555 B SER 39 B SER 41 25 1_555 B THR 40 B THR 42 25 1_555 B GLY 66 B GLY 68 25 1_555 B ASN 121 B ASN 123 25 1_555 B LYS 122 B LYS 124 25 1_555 B ASP 124 B ASP 126 25 1_555 B LEU 125 B LEU 127 25 1_555 B SER 151 B SER 153 25 1_555 B ALA 152 B ALA 154 25 1_555 B LYS 153 B LYS 155 25 1_555 B MG 302 D MG 25 1_555 B HOH 404 F HOH 25 1_555 B HOH 408 F HOH 25 1_555 B HOH 410 F HOH 25 1_555 B SER 22 B SER 24 5 1_555 B THR 40 B THR 42 5 1_555 B GNP 301 C GNP 5 1_555 B HOH 404 F HOH 5 1_555 B HOH 410 F HOH 5 1_555 23 I 2 2 2