0.006294 0.000000 0.000886 0.000000 0.023535 0.000000 0.000000 0.000000 0.022358 0.00000 0.00000 0.00000 Hong, S. Horton, J.R. Cheng, X. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 98.01 90.00 158.871 42.490 45.167 C10 H16 N3 O7 P 321.224 n 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE DNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N C N 3 N N N 4 N C N 5 N C N 6 N C N 7 N C N 8 N O N 9 N N N 10 R C N 11 N C N 12 S C N 13 R C N 14 N O N 15 N O N 16 N C N 17 N O N 18 N P N 19 N O N 20 N O N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N N N 39 S C N 40 N C N 41 N O N 42 N C N 43 N O N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N N N 52 S C N 53 N C N 54 N O N 55 N C N 56 N C N 57 N C N 58 N N N 59 N C N 60 N N N 61 N N N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N N N 79 S C N 80 N C N 81 N O N 82 N C N 83 N C N 84 N O N 85 N N N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 R C N 97 N C N 98 N O N 99 N C N 100 N S N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N O N 110 N P N 111 N O N 112 N O N 113 N O N 114 N C N 115 R C N 116 N O N 117 S C N 118 N O N 119 N C N 120 R C Y 121 N N Y 122 N C Y 123 N N Y 124 N C Y 125 N C N 126 N N Y 127 N N Y 128 N C Y 129 N N Y 130 N C N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N O N 146 N P N 147 N O N 148 N O N 149 N O N 150 N C N 151 R C N 152 N O N 153 S C N 154 N O N 155 N C N 156 R C N 157 N N N 158 N C N 159 N O N 160 N N N 161 N C N 162 N N N 163 N C N 164 N C N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N P N 181 N O N 182 N O N 183 N O N 184 N C N 185 R C N 186 N O N 187 S C N 188 N O N 189 N C N 190 R C Y 191 N N Y 192 N C Y 193 N N Y 194 N C N 195 N C N 196 N O N 197 N N N 198 N C N 199 N N N 200 N N Y 201 N C N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N O N 217 N P N 218 N O N 219 N O N 220 N O N 221 N C N 222 R C N 223 N O N 224 S C N 225 N O N 226 N C N 227 R C N 228 N N N 229 N C N 230 N O N 231 N N N 232 N C N 233 N O N 234 N C N 235 N C N 236 N C N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N C N 258 N C N 259 N O N 260 N N N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N N N 273 S C N 274 N C N 275 N O N 276 N C N 277 N C N 278 N C N 279 N O N 280 N O N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C Y 296 N C Y 297 N N Y 298 N C Y 299 N C Y 300 N N N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N O N 313 N H N 314 N H N 315 N N N 316 S C N 317 N C N 318 N O N 319 S C N 320 N C N 321 N C N 322 N C N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C N 342 N C N 343 N C N 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C N 364 N C N 365 N C N 366 N C N 367 N N N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N N N 385 S C N 386 N C N 387 N O N 388 N C N 389 N C N 390 N S N 391 N C N 392 N O N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 N C N 409 N O N 410 N O N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N N N 419 S C N 420 N C N 421 N O N 422 R C N 423 N O N 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N N N 436 S C N 437 N C N 438 N O N 439 N C N 440 N C N 441 N C N 442 N O N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N doub N 7 N sing N 8 N sing N 9 N sing N 10 N doub N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N doub N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N doub N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N doub N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing Y 129 N sing Y 130 N sing Y 131 N doub N 132 N sing Y 133 N sing Y 134 N sing Y 135 N doub N 136 N sing Y 137 N doub N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub N 142 N sing Y 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing Y 202 N sing Y 203 N sing Y 204 N doub N 205 N sing Y 206 N sing N 207 N sing Y 208 N doub N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N doub N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N doub N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N doub N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing Y 303 N sing Y 304 N doub Y 305 N doub N 306 N sing Y 307 N sing N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N doub N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N doub N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N doub N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing UK Nucleic Acids Res. NARHAD 0389 1362-4962 45 2503 2515 10.1093/nar/gkx057 28158710 Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta. 2017 10.2210/pdb5t01/pdb pdb_00005t01 100 1 CCD 2015-02-27 RAYONIX MX300-HS SINGLE WAVELENGTH M x-ray 1 1.000 1.0 22-ID APS 1.000 SYNCHROTRON APS BEAMLINE 22-ID 5706.697 DNA (5'-D(P*CP*TP*CP*CP*TP*AP*TP*GP*AP*CP*TP*CP*GP*TP*CP*CP*AP*T)-3') 1 syn polymer 5956.901 DNA (5'-D(*AP*AP*TP*GP*GP*AP*(5CM)P*GP*AP*GP*TP*CP*AP*TP*AP*GP*GP*AP*G)-3') 1 syn polymer 7591.038 Transcription factor AP-1 DNA binding domain (UNP residues 254-315) C269S 2 man polymer 18.015 water 120 nat water Activator protein 1,AP1,Proto-oncogene c-Jun,V-jun avian sarcoma virus 17 oncogene homolog,p39 no no (DT)(DC)(DT)(DC)(DC)(DT)(DA)(DT)(DG)(DA)(DC)(DT)(DC)(DG)(DT)(DC)(DC)(DA)(DT) TCTCCTATGACTCGTCCAT C polydeoxyribonucleotide no yes (DA)(DA)(DT)(DG)(DG)(DA)(5CM)(DG)(DA)(DG)(DT)(DC)(DA)(DT)(DA)(DG)(DG)(DA)(DG) AATGGACGAGTCATAGGAG D polydeoxyribonucleotide no no HMKAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNH HMKAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNH A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 64 JUN 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 2.81 56.25 VAPOR DIFFUSION, HANGING DROP 5.0 0.05 M Citric acid 0.05 M Bis-Tris propane 16% PEG3350 289 12.610 1 19 C 1 D 41 -3.182 C_DC1:DG41_D 1 -28.603 0.222 0.513 -0.177 2.236 1 20 C 2 D 40 -0.010 C_DT2:DA40_D 2 -16.149 -0.139 -0.042 -0.204 6.694 1 19 C 3 D 39 3.881 C_DC3:DG39_D 3 -14.954 0.343 -0.092 -0.085 -6.379 1 19 C 4 D 38 -0.804 C_DC4:DG38_D 4 -12.748 0.133 0.191 -0.176 -2.390 1 20 C 5 D 37 -3.395 C_DT5:DA37_D 5 -11.488 -0.130 0.007 -0.178 -10.080 1 20 C 6 D 36 3.229 C_DA6:DT36_D 6 -6.527 0.189 -0.048 -0.136 0.337 1 20 C 7 D 35 -1.958 C_DT7:DA35_D 7 -11.116 -0.155 0.058 -0.147 -0.157 1 19 C 8 D 34 -0.717 C_DG8:DC34_D 8 -8.515 -0.424 -0.027 -0.136 0.508 1 20 C 9 D 33 4.307 C_DA9:DT33_D 9 -14.556 -0.122 0.128 -0.170 -8.540 1 19 C 10 D 32 -1.025 C_DC10:DG32_D 10 -10.200 0.355 0.346 -0.274 -7.485 1 20 C 11 D 31 1.409 C_DT11:DA31_D 11 -9.879 -0.216 0.160 -0.097 -1.428 1 19 C 12 D 30 -3.695 C_DC12:DG30_D 12 -7.405 0.203 0.071 -0.204 -0.225 1 19 C 13 D 29 -0.247 C_DG13:5CM29_D 13 -7.988 -0.320 -0.060 -0.167 6.574 1 20 C 14 D 28 4.042 C_DT14:DA28_D 14 -13.995 0.023 0.052 -0.139 2.961 1 19 C 15 D 27 1.036 C_DC15:DG27_D 15 -16.814 0.278 -0.127 -0.212 -14.261 1 19 C 16 D 26 -0.810 C_DC16:DG26_D 16 -6.968 0.220 0.382 -0.213 -9.596 1 20 C 17 D 25 4.528 C_DA17:DT25_D 17 -7.741 0.166 -0.124 -0.132 3.160 1 20 C 18 D 24 1.537 C_DT18:DA24_D 18 -5.309 -0.050 -0.112 -0.136 3.045 31.935 C C 1 2 13.829 D D 41 40 3.533 7.521 -1.077 -1.013 CC_DC1DT2:DA40DG41_DD 1 4.031 -7.413 30.803 -3.239 2.706 3.107 33.276 C C 2 3 9.737 D D 40 39 3.175 5.551 0.138 -0.179 CC_DT2DC3:DG39DA40_DD 2 1.040 -1.824 32.807 -1.208 -0.074 3.372 34.513 C C 3 4 10.887 D D 39 38 3.472 6.422 0.054 -0.219 CC_DC3DC4:DG38DG39_DD 3 -1.262 2.140 33.905 -1.419 -0.298 3.134 32.894 C C 4 5 9.210 D D 38 37 3.245 5.192 -0.518 -0.267 CC_DC4DT5:DA37DG38_DD 4 1.737 -3.081 32.448 -1.343 1.207 3.420 45.830 C C 5 6 5.436 D D 37 36 3.390 4.228 0.439 0.483 CC_DT5DA6:DT36DA37_DD 5 0.102 -0.131 45.645 0.237 -0.554 2.995 24.543 C C 6 7 4.568 D D 36 35 3.034 1.940 -0.497 -0.442 CC_DA6DT7:DA35DT36_DD 6 -0.207 0.488 24.467 -1.592 1.110 3.335 38.571 C C 7 8 9.617 D D 35 34 3.236 6.319 -0.559 0.668 CC_DT7DG8:DC34DA35_DD 7 -3.264 4.968 37.935 0.220 0.438 3.147 37.323 C C 8 9 10.239 D D 34 33 3.243 6.517 0.395 -0.116 CC_DG8DA9:DT33DC34_DD 8 -2.350 3.692 36.697 -1.030 -0.923 3.534 34.740 C C 9 10 -1.931 D D 33 32 3.497 -1.151 -0.388 -0.585 CC_DA9DC10:DG32DT33_DD 9 -2.919 4.895 34.602 -0.790 0.170 3.256 35.278 C C 10 11 8.007 D D 32 31 3.266 4.823 0.555 -0.197 CC_DC10DT11:DA31DG32_DD 10 4.960 -8.234 34.614 -1.045 -0.176 3.225 31.259 C C 11 12 3.971 D D 31 30 3.266 2.138 -0.628 -0.101 CC_DT11DC12:DG30DA31_DD 11 1.265 -2.350 31.163 -0.589 1.404 3.463 38.590 C C 12 13 2.904 D D 30 29 3.376 1.916 0.792 0.723 CC_DC12DG13:5CM29DG30_DD 12 3.494 -5.295 38.392 0.846 -0.747 3.103 29.397 C C 13 14 4.349 D D 29 28 3.157 2.204 0.128 -0.414 CC_DG13DT14:DA285CM29_DD 13 -1.989 3.925 29.250 -1.270 -0.661 3.327 39.023 C C 14 15 0.989 D D 28 27 3.338 0.660 -0.313 -0.223 CC_DT14DC15:DG27DA28_DD 14 0.740 -1.108 39.011 -0.416 0.559 3.441 34.742 C C 15 16 14.045 D D 27 26 3.698 8.294 -0.310 -0.723 CC_DC15DC16:DG26DG27_DD 15 -3.729 6.314 33.567 -2.620 -0.115 3.375 38.688 C C 16 17 8.060 D D 26 25 3.169 5.298 1.142 0.640 CC_DC16DA17:DT25DG26_DD 16 6.888 -10.481 37.736 0.307 -0.867 2.875 23.731 C C 17 18 13.111 D D 25 24 2.992 5.346 -0.170 -0.159 CC_DA17DT18:DA24DT25_DD 17 0.725 -1.778 23.118 -1.992 0.632 diffrn_detector pdbx_audit_support chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Database references Data collection Author supporting evidence Data collection Database references Refinement description 1 0 2017-03-01 1 1 2017-05-03 1 2 2017-09-27 1 3 2019-12-04 1 4 2023-10-04 _diffrn_detector.detector _pdbx_audit_support.funding_organization _database_2.pdbx_DOI _database_2.pdbx_database_accession United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) N RCSB Y RCSB 2016-08-15 REL REL HOH water 32630 synthetic construct sample 1 19 32630 synthetic construct sample 1 19 1FOS PDB experimental model HOH 234 4 HOH HOH 101 C HOH 40 4 HOH HOH 102 C HOH 91 4 HOH HOH 103 C HOH 237 4 HOH HOH 104 C HOH 177 4 HOH HOH 105 C HOH 60 4 HOH HOH 106 C HOH 42 4 HOH HOH 107 C HOH 8 4 HOH HOH 108 C HOH 160 4 HOH HOH 109 C HOH 31 4 HOH HOH 110 C HOH 68 4 HOH HOH 111 C HOH 43 4 HOH HOH 112 C HOH 213 4 HOH HOH 113 C HOH 236 4 HOH HOH 114 C HOH 67 4 HOH HOH 115 C HOH 20 4 HOH HOH 116 C HOH 84 4 HOH HOH 117 C HOH 222 4 HOH HOH 118 C HOH 106 4 HOH HOH 119 C HOH 13 4 HOH HOH 120 C HOH 228 4 HOH HOH 121 C HOH 21 4 HOH HOH 122 C HOH 3 4 HOH HOH 123 C HOH 33 4 HOH HOH 124 C HOH 232 4 HOH HOH 125 C HOH 36 4 HOH HOH 126 C HOH 235 4 HOH HOH 127 C HOH 233 4 HOH HOH 128 C HOH 126 4 HOH HOH 129 C HOH 224 4 HOH HOH 130 C HOH 216 4 HOH HOH 131 C HOH 54 4 HOH HOH 132 C HOH 207 4 HOH HOH 133 C HOH 12 4 HOH HOH 134 C HOH 204 4 HOH HOH 135 C HOH 230 4 HOH HOH 136 C HOH 212 4 HOH HOH 137 C HOH 229 4 HOH HOH 138 C HOH 85 4 HOH HOH 139 C HOH 198 4 HOH HOH 101 D HOH 10 4 HOH HOH 102 D HOH 25 4 HOH HOH 103 D HOH 62 4 HOH HOH 104 D HOH 55 4 HOH HOH 105 D HOH 45 4 HOH HOH 106 D HOH 133 4 HOH HOH 107 D HOH 243 4 HOH HOH 108 D HOH 218 4 HOH HOH 109 D HOH 29 4 HOH HOH 110 D HOH 214 4 HOH HOH 111 D HOH 9 4 HOH HOH 112 D HOH 30 4 HOH HOH 113 D HOH 19 4 HOH HOH 114 D HOH 32 4 HOH HOH 115 D HOH 242 4 HOH HOH 116 D HOH 231 4 HOH HOH 117 D HOH 175 4 HOH HOH 118 D HOH 24 4 HOH HOH 119 D HOH 4 4 HOH HOH 120 D HOH 217 4 HOH HOH 121 D HOH 49 4 HOH HOH 122 D HOH 227 4 HOH HOH 123 D HOH 39 4 HOH HOH 124 D HOH 186 4 HOH HOH 125 D HOH 208 4 HOH HOH 126 D HOH 206 4 HOH HOH 127 D HOH 130 4 HOH HOH 128 D HOH 220 4 HOH HOH 129 D HOH 244 4 HOH HOH 401 A HOH 240 4 HOH HOH 402 A HOH 37 4 HOH HOH 403 A HOH 35 4 HOH HOH 404 A HOH 61 4 HOH HOH 405 A HOH 210 4 HOH HOH 406 A HOH 74 4 HOH HOH 407 A HOH 2 4 HOH HOH 408 A HOH 81 4 HOH HOH 409 A HOH 27 4 HOH HOH 410 A HOH 59 4 HOH HOH 411 A HOH 41 4 HOH HOH 412 A HOH 87 4 HOH HOH 413 A HOH 94 4 HOH HOH 414 A HOH 225 4 HOH HOH 415 A HOH 22 4 HOH HOH 416 A HOH 16 4 HOH HOH 417 A HOH 26 4 HOH HOH 418 A HOH 6 4 HOH HOH 419 A HOH 239 4 HOH HOH 420 A HOH 69 4 HOH HOH 421 A HOH 147 4 HOH HOH 422 A HOH 144 4 HOH HOH 423 A HOH 72 4 HOH HOH 424 A HOH 38 4 HOH HOH 425 A HOH 134 4 HOH HOH 426 A HOH 209 4 HOH HOH 401 B HOH 245 4 HOH HOH 402 B HOH 223 4 HOH HOH 403 B HOH 17 4 HOH HOH 404 B HOH 1 4 HOH HOH 405 B HOH 172 4 HOH HOH 406 B HOH 78 4 HOH HOH 407 B HOH 5 4 HOH HOH 408 B HOH 7 4 HOH HOH 409 B HOH 141 4 HOH HOH 410 B HOH 47 4 HOH HOH 411 B HOH 14 4 HOH HOH 412 B HOH 44 4 HOH HOH 413 B HOH 226 4 HOH HOH 414 B HOH 48 4 HOH HOH 415 B HOH 119 4 HOH HOH 416 B HOH 58 4 HOH HOH 417 B HOH 197 4 HOH HOH 418 B HOH 97 4 HOH HOH 419 B HOH 127 4 HOH HOH 420 B HOH 215 4 HOH HOH 421 B HOH 238 4 HOH HOH 422 B HOH 159 4 HOH HOH 423 B HOH 221 4 HOH HOH 424 B HOH 53 4 HOH HOH 425 B HOH 191 4 HOH HOH 426 B n 1 0 C DC 1 n 2 DC 1 C DT 2 n 3 DT 2 C DC 3 n 4 DC 3 C DC 4 n 5 DC 4 C DT 5 n 6 DT 5 C DA 6 n 7 DA 6 C DT 7 n 8 DT 7 C DG 8 n 9 DG 8 C DA 9 n 10 DA 9 C DC 10 n 11 DC 10 C DT 11 n 12 DT 11 C DC 12 n 13 DC 12 C DG 13 n 14 DG 13 C DT 14 n 15 DT 14 C DC 15 n 16 DC 15 C DC 16 n 17 DC 16 C DA 17 n 18 DA 17 C DT 18 n 19 DT 18 C DA 23 n 1 DA 23 D DA 24 n 2 DA 24 D DT 25 n 3 DT 25 D DG 26 n 4 DG 26 D DG 27 n 5 DG 27 D DA 28 n 6 DA 28 D 5CM 29 n 7 5CM 29 D DG 30 n 8 DG 30 D DA 31 n 9 DA 31 D DG 32 n 10 DG 32 D DT 33 n 11 DT 33 D DC 34 n 12 DC 34 D DA 35 n 13 DA 35 D DT 36 n 14 DT 36 D DA 37 n 15 DA 37 D DG 38 n 16 DG 38 D DG 39 n 17 DG 39 D DA 40 n 18 DA 40 D DG 41 n 19 DG 41 D HIS 252 n 1 HIS 252 A MET 253 n 2 MET 253 A LYS 254 n 3 LYS 254 A ALA 255 n 4 ALA 255 A GLU 256 n 5 GLU 256 A ARG 257 n 6 ARG 257 A LYS 258 n 7 LYS 258 A ARG 259 n 8 ARG 259 A MET 260 n 9 MET 260 A ARG 261 n 10 ARG 261 A ASN 262 n 11 ASN 262 A ARG 263 n 12 ARG 263 A ILE 264 n 13 ILE 264 A ALA 265 n 14 ALA 265 A ALA 266 n 15 ALA 266 A SER 267 n 16 SER 267 A LYS 268 n 17 LYS 268 A SER 269 n 18 SER 269 A ARG 270 n 19 ARG 270 A LYS 271 n 20 LYS 271 A ARG 272 n 21 ARG 272 A LYS 273 n 22 LYS 273 A LEU 274 n 23 LEU 274 A GLU 275 n 24 GLU 275 A ARG 276 n 25 ARG 276 A ILE 277 n 26 ILE 277 A ALA 278 n 27 ALA 278 A ARG 279 n 28 ARG 279 A LEU 280 n 29 LEU 280 A GLU 281 n 30 GLU 281 A GLU 282 n 31 GLU 282 A LYS 283 n 32 LYS 283 A VAL 284 n 33 VAL 284 A LYS 285 n 34 LYS 285 A THR 286 n 35 THR 286 A LEU 287 n 36 LEU 287 A LYS 288 n 37 LYS 288 A ALA 289 n 38 ALA 289 A GLN 290 n 39 GLN 290 A ASN 291 n 40 ASN 291 A SER 292 n 41 SER 292 A GLU 293 n 42 GLU 293 A LEU 294 n 43 LEU 294 A ALA 295 n 44 ALA 295 A SER 296 n 45 SER 296 A THR 297 n 46 THR 297 A ALA 298 n 47 ALA 298 A ASN 299 n 48 ASN 299 A MET 300 n 49 MET 300 A LEU 301 n 50 LEU 301 A ARG 302 n 51 ARG 302 A GLU 303 n 52 GLU 303 A GLN 304 n 53 GLN 304 A VAL 305 n 54 VAL 305 A ALA 306 n 55 ALA 306 A GLN 307 n 56 GLN 307 A LEU 308 n 57 LEU 308 A LYS 309 n 58 LYS 309 A GLN 310 n 59 GLN 310 A LYS 311 n 60 LYS 311 A VAL 312 n 61 VAL 312 A MET 313 n 62 MET 313 A n 63 314 A n 64 315 A HIS 252 n 1 HIS 252 B MET 253 n 2 MET 253 B LYS 254 n 3 LYS 254 B ALA 255 n 4 ALA 255 B GLU 256 n 5 GLU 256 B ARG 257 n 6 ARG 257 B LYS 258 n 7 LYS 258 B ARG 259 n 8 ARG 259 B MET 260 n 9 MET 260 B ARG 261 n 10 ARG 261 B ASN 262 n 11 ASN 262 B ARG 263 n 12 ARG 263 B ILE 264 n 13 ILE 264 B ALA 265 n 14 ALA 265 B ALA 266 n 15 ALA 266 B SER 267 n 16 SER 267 B LYS 268 n 17 LYS 268 B SER 269 n 18 SER 269 B ARG 270 n 19 ARG 270 B LYS 271 n 20 LYS 271 B ARG 272 n 21 ARG 272 B LYS 273 n 22 LYS 273 B LEU 274 n 23 LEU 274 B GLU 275 n 24 GLU 275 B ARG 276 n 25 ARG 276 B ILE 277 n 26 ILE 277 B ALA 278 n 27 ALA 278 B ARG 279 n 28 ARG 279 B LEU 280 n 29 LEU 280 B GLU 281 n 30 GLU 281 B GLU 282 n 31 GLU 282 B LYS 283 n 32 LYS 283 B VAL 284 n 33 VAL 284 B LYS 285 n 34 LYS 285 B THR 286 n 35 THR 286 B LEU 287 n 36 LEU 287 B LYS 288 n 37 LYS 288 B ALA 289 n 38 ALA 289 B GLN 290 n 39 GLN 290 B ASN 291 n 40 ASN 291 B SER 292 n 41 SER 292 B GLU 293 n 42 GLU 293 B LEU 294 n 43 LEU 294 B ALA 295 n 44 ALA 295 B SER 296 n 45 SER 296 B THR 297 n 46 THR 297 B ALA 298 n 47 ALA 298 B ASN 299 n 48 ASN 299 B MET 300 n 49 MET 300 B LEU 301 n 50 LEU 301 B ARG 302 n 51 ARG 302 B GLU 303 n 52 GLU 303 B GLN 304 n 53 GLN 304 B VAL 305 n 54 VAL 305 B ALA 306 n 55 ALA 306 B GLN 307 n 56 GLN 307 B LEU 308 n 57 LEU 308 B LYS 309 n 58 LYS 309 B GLN 310 n 59 GLN 310 B ALA 311 n 60 LYS 311 B VAL 312 n 61 VAL 312 B MET 313 n 62 MET 313 B n 63 314 B n 64 315 B 0.4259 0.3658 -0.0501 0.3155 0.6462 0.3373 0.0810 -0.0335 -0.0295 0.2442 -0.0105 -0.2212 0.0741 0.1651 0.0061 0.3690 -0.0006 -0.0670 0.3422 0.0003 0.3577 refined -24.4193 16.7252 20.1421 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 all author_and_software_defined_assembly PISA 4 tetrameric 7000 -42 15190 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B CG LYS 311 D CG LYS 60 1 Y 1 B CD LYS 311 D CD LYS 60 1 Y 1 B CE LYS 311 D CE LYS 60 1 Y 1 B NZ LYS 311 D NZ LYS 60 1 Y 1 C DT 0 A DT 1 1 Y 1 A ASN 314 C ASN 63 1 Y 1 A HIS 315 C HIS 64 1 Y 1 B ASN 314 D ASN 63 1 Y 1 B HIS 315 D HIS 64 1 Y 1 1.90 0.30 108.30 110.20 C C C O4' C1' N1 DT DT DT 18 18 18 N 1 2.34 0.30 108.30 110.64 D D D O4' C1' N9 DG DG DG 41 41 41 N 1 C C O3' C3' DT DT 11 11 -0.056 0.006 1.419 1.363 N 1 C C O3' C3' DC DC 15 15 -0.037 0.006 1.419 1.382 N 1 D D O3' C3' DA DA 31 31 -0.061 0.006 1.419 1.358 N 0.2271 0.1931 0.1949 1.89 27.750 1187 23712 5.01 97.97 0.24 1 FREE R-VALUE 1.35 MOLECULAR REPLACEMENT 28.09 0.90 1.11 1FOS ML FLAT BULK SOLVENT MODEL 1.89 27.750 120 1890 0 758 1012 0.014 1861 1.374 2638 23.914 802 0.058 296 0.007 205 0.3226 0.2980 1.9755 131 2485 87.00 0.2908 0.2695 2.0797 147 2777 98.00 0.2835 0.2403 2.2099 150 2858 100.00 0.2851 0.2248 2.3804 151 2872 100.00 0.2734 0.2380 2.6198 150 2849 100.00 0.2497 0.2336 2.9985 152 2875 100.00 0.2292 0.1798 3.7763 151 2875 100.00 0.1767 0.1496 27.7531 155 2934 99.00 1.89 35 5T01 23735 0.083 1 20.3 6.9 98.5 0.800 1.89 1.96 2.63 1 4.2 90.1 refinement PHENIX 1.9_1692 model building PHENIX 1.9_1692 data collection SERGUI data scaling HKL-2000 data reduction HKL-2000 phasing PHENIX N Human c-Jun DNA binding domain homodimer in complex with methylated DNA 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A LYS 254 C LYS 3 HELX_P A LYS 311 C LYS 60 1 AA1 58 B LYS 254 D LYS 3 HELX_P B MET 313 D MET 62 1 AA2 60 covale 1.612 both D DA 28 B O3' DA 6 1_555 D 5CM 29 B P 5CM 7 1_555 covale 1.619 both D 5CM 29 B O3' 5CM 7 1_555 D DG 30 B P DG 8 1_555 hydrog WATSON-CRICK C DC 1 A N3 DC 2 1_555 D DG 41 B N1 DG 19 1_555 hydrog WATSON-CRICK C DC 1 A N4 DC 2 1_555 D DG 41 B O6 DG 19 1_555 hydrog WATSON-CRICK C DC 1 A O2 DC 2 1_555 D DG 41 B N2 DG 19 1_555 hydrog WATSON-CRICK C DT 2 A N3 DT 3 1_555 D DA 40 B N1 DA 18 1_555 hydrog WATSON-CRICK C DT 2 A O4 DT 3 1_555 D DA 40 B N6 DA 18 1_555 hydrog WATSON-CRICK C DC 3 A N3 DC 4 1_555 D DG 39 B N1 DG 17 1_555 hydrog WATSON-CRICK C DC 3 A N4 DC 4 1_555 D DG 39 B O6 DG 17 1_555 hydrog WATSON-CRICK C DC 3 A O2 DC 4 1_555 D DG 39 B N2 DG 17 1_555 hydrog WATSON-CRICK C DC 4 A N3 DC 5 1_555 D DG 38 B N1 DG 16 1_555 hydrog WATSON-CRICK C DC 4 A N4 DC 5 1_555 D DG 38 B O6 DG 16 1_555 hydrog WATSON-CRICK C DC 4 A O2 DC 5 1_555 D DG 38 B N2 DG 16 1_555 hydrog WATSON-CRICK C DT 5 A N3 DT 6 1_555 D DA 37 B N1 DA 15 1_555 hydrog WATSON-CRICK C DT 5 A O4 DT 6 1_555 D DA 37 B N6 DA 15 1_555 hydrog WATSON-CRICK C DA 6 A N1 DA 7 1_555 D DT 36 B N3 DT 14 1_555 hydrog WATSON-CRICK C DA 6 A N6 DA 7 1_555 D DT 36 B O4 DT 14 1_555 hydrog WATSON-CRICK C DT 7 A N3 DT 8 1_555 D DA 35 B N1 DA 13 1_555 hydrog WATSON-CRICK C DT 7 A O4 DT 8 1_555 D DA 35 B N6 DA 13 1_555 hydrog WATSON-CRICK C DG 8 A N1 DG 9 1_555 D DC 34 B N3 DC 12 1_555 hydrog WATSON-CRICK C DG 8 A N2 DG 9 1_555 D DC 34 B O2 DC 12 1_555 hydrog WATSON-CRICK C DG 8 A O6 DG 9 1_555 D DC 34 B N4 DC 12 1_555 hydrog WATSON-CRICK C DA 9 A N1 DA 10 1_555 D DT 33 B N3 DT 11 1_555 hydrog WATSON-CRICK C DA 9 A N6 DA 10 1_555 D DT 33 B O4 DT 11 1_555 hydrog WATSON-CRICK C DC 10 A N3 DC 11 1_555 D DG 32 B N1 DG 10 1_555 hydrog WATSON-CRICK C DC 10 A N4 DC 11 1_555 D DG 32 B O6 DG 10 1_555 hydrog WATSON-CRICK C DC 10 A O2 DC 11 1_555 D DG 32 B N2 DG 10 1_555 hydrog WATSON-CRICK C DT 11 A N3 DT 12 1_555 D DA 31 B N1 DA 9 1_555 hydrog WATSON-CRICK C DT 11 A O4 DT 12 1_555 D DA 31 B N6 DA 9 1_555 hydrog WATSON-CRICK C DC 12 A N3 DC 13 1_555 D DG 30 B N1 DG 8 1_555 hydrog WATSON-CRICK C DC 12 A N4 DC 13 1_555 D DG 30 B O6 DG 8 1_555 hydrog WATSON-CRICK C DC 12 A O2 DC 13 1_555 D DG 30 B N2 DG 8 1_555 hydrog WATSON-CRICK C DG 13 A N1 DG 14 1_555 D 5CM 29 B N3 5CM 7 1_555 hydrog WATSON-CRICK C DG 13 A N2 DG 14 1_555 D 5CM 29 B O2 5CM 7 1_555 hydrog WATSON-CRICK C DG 13 A O6 DG 14 1_555 D 5CM 29 B N4 5CM 7 1_555 hydrog WATSON-CRICK C DT 14 A N3 DT 15 1_555 D DA 28 B N1 DA 6 1_555 hydrog WATSON-CRICK C DT 14 A O4 DT 15 1_555 D DA 28 B N6 DA 6 1_555 hydrog WATSON-CRICK C DC 15 A N3 DC 16 1_555 D DG 27 B N1 DG 5 1_555 hydrog WATSON-CRICK C DC 15 A N4 DC 16 1_555 D DG 27 B O6 DG 5 1_555 hydrog WATSON-CRICK C DC 15 A O2 DC 16 1_555 D DG 27 B N2 DG 5 1_555 hydrog WATSON-CRICK C DC 16 A N3 DC 17 1_555 D DG 26 B N1 DG 4 1_555 hydrog WATSON-CRICK C DC 16 A N4 DC 17 1_555 D DG 26 B O6 DG 4 1_555 hydrog WATSON-CRICK C DC 16 A O2 DC 17 1_555 D DG 26 B N2 DG 4 1_555 hydrog WATSON-CRICK C DA 17 A N1 DA 18 1_555 D DT 25 B N3 DT 3 1_555 hydrog WATSON-CRICK C DA 17 A N6 DA 18 1_555 D DT 25 B O4 DT 3 1_555 hydrog WATSON-CRICK C DT 18 A N3 DT 19 1_555 D DA 24 B N1 DA 2 1_555 hydrog WATSON-CRICK C DT 18 A O4 DT 19 1_555 D DA 24 B N6 DA 2 1_555 TRANSCRIPTION REGULATOR/DNA Zta, Zebra, BZLF-1, AP-1, Epstein-Barr virus, EBV, 5-methylcytosine, 5mC, DNA methylation, transcription factor, basic leucine-zipper, bZIP, TRANSCRIPTION REGULATOR-DNA complex 5T01 PDB 1 1 5T01 5T01 PDB 2 1 5T01 JUN_HUMAN UNP 3 254 P05412 KAERKRMRNRIAASKCRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNH 0 18 5T01 0 18 5T01 C 1 1 19 23 41 5T01 23 41 5T01 D 2 1 19 254 315 5T01 254 315 P05412 A 3 3 64 254 315 5T01 254 315 P05412 B 3 3 64 3 expression tag HIS 252 5T01 A P05412 UNP 1 3 expression tag MET 253 5T01 A P05412 UNP 2 3 CYS engineered mutation SER 269 5T01 A P05412 UNP 269 18 4 expression tag HIS 252 5T01 B P05412 UNP 1 4 expression tag MET 253 5T01 B P05412 UNP 2 4 CYS engineered mutation SER 269 5T01 B P05412 UNP 269 18 5 C 1 2 1