0.022769 0.013145 0.000000 0.000000 0.026291 0.000000 0.000000 0.000000 0.018038 0.000000 0.000000 0.000000 Biel, J.T. Thompson, M.C. Cunningham, C.N. Corn, J.E. Fraser, J.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.000 90.000 120.000 43.920 43.920 55.440 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N S N 291 N O N 292 N O N 293 N O N 294 N O N 295 N N N 296 S C N 297 N C N 298 N O N 299 R C N 300 N O N 301 N C N 302 N O N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N N Y 321 N C Y 322 N C Y 323 N C Y 324 N C Y 325 N C N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C Y 349 N C N 350 N O N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N C N 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N doub N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N doub Y 313 N sing Y 314 N sing N 315 N sing Y 316 N sing Y 317 N doub N 318 N sing Y 319 N doub N 320 N sing Y 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing Y 336 N doub Y 337 N sing Y 338 N sing N 339 N sing Y 340 N doub N 341 N sing Y 342 N doub N 343 N sing Y 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing UK Structure STRUE6 2005 1878-4186 25 739 749.e3 10.1016/j.str.2017.03.009 28416112 Flexibility and Design: Conformational Heterogeneity along the Evolutionary Trajectory of a Redesigned Ubiquitin. 2017 10.2210/pdb5tog/pdb pdb_00005tog 273 1 CCD 2014-12-04 ADSC QUANTUM 315 SINGLE WAVELENGTH M x-ray 1 0.954 1.0 8.3.1 ALS 0.954 SYNCHROTRON ALS BEAMLINE 8.3.1 8910.185 Polyubiquitin-B 1 man polymer 96.063 SULFATE ION 2 syn non-polymer 18.015 water 83 nat water U7Ub25.2540 no no GSMQIFVKFRTGKTYTLEVEPSDTIENVKAKIQDKLGIPPDQQWLIFAGKRLEDGRTLSDYNIQKESTLRGVRRLRGG GSMQIFVKFRTGKTYTLEVEPSDTIENVKAKIQDKLGIPPDQQWLIFAGKRLEDGRTLSDYNIQKESTLRGVRRLRGG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 78 UBB 9606 Homo sapiens 562 Escherichia coli Biological sequence 1 1.79 31.16 VAPOR DIFFUSION, HANGING DROP 1ul protein solution at 10 mg/ml (20 mM Tris pH 8.0, 150 mM NaCl), 1ul crystallization solution (0.1 M citric acid pH 4.2, 2.2 M ammonium sulfate) 293 pdbx_audit_support software pdbx_audit_support chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Author supporting evidence Refinement description Author supporting evidence Data collection Database references Refinement description 1 0 2017-05-24 1 1 2017-09-27 1 2 2019-11-27 1 3 2023-10-04 _pdbx_audit_support.funding_organization _pdbx_audit_support.funding_organization _database_2.pdbx_DOI _database_2.pdbx_database_accession United States National Institutes of Health/Office of the Director DP5 OD009180 United States National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) R21 GM110580 United States National Science Foundation (NSF, United States) STC-1231306 United States National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) F32 HL129989 N RCSB Y RCSB 2016-10-17 REL REL 1 A O HOH 283 c 11.88 SO4 SULFATE ION HOH water 1UQB PDB experimental model SO4 1 2 SO4 SO4 101 A SO4 2 2 SO4 SO4 102 A HOH 20 3 HOH HOH 201 A HOH 104 3 HOH HOH 202 A HOH 65 3 HOH HOH 203 A HOH 73 3 HOH HOH 204 A HOH 57 3 HOH HOH 205 A HOH 22 3 HOH HOH 206 A HOH 61 3 HOH HOH 207 A HOH 36 3 HOH HOH 208 A HOH 42 3 HOH HOH 209 A HOH 49 3 HOH HOH 210 A HOH 83 3 HOH HOH 211 A HOH 25 3 HOH HOH 212 A HOH 32 3 HOH HOH 213 A HOH 67 3 HOH HOH 214 A HOH 30 3 HOH HOH 215 A HOH 1 3 HOH HOH 216 A HOH 24 3 HOH HOH 217 A HOH 19 3 HOH HOH 218 A HOH 50 3 HOH HOH 219 A HOH 66 3 HOH HOH 220 A HOH 6 3 HOH HOH 221 A HOH 13 3 HOH HOH 222 A HOH 2 3 HOH HOH 223 A HOH 11 3 HOH HOH 224 A HOH 41 3 HOH HOH 225 A HOH 26 3 HOH HOH 226 A HOH 4 3 HOH HOH 227 A HOH 43 3 HOH HOH 228 A HOH 38 3 HOH HOH 229 A HOH 40 3 HOH HOH 230 A HOH 58 3 HOH HOH 231 A HOH 54 3 HOH HOH 232 A HOH 17 3 HOH HOH 233 A HOH 16 3 HOH HOH 234 A HOH 21 3 HOH HOH 235 A HOH 33 3 HOH HOH 236 A HOH 14 3 HOH HOH 237 A HOH 92 3 HOH HOH 238 A HOH 8 3 HOH HOH 239 A HOH 69 3 HOH HOH 240 A HOH 82 3 HOH HOH 241 A HOH 74 3 HOH HOH 242 A HOH 15 3 HOH HOH 243 A HOH 31 3 HOH HOH 244 A HOH 99 3 HOH HOH 245 A HOH 59 3 HOH HOH 246 A HOH 93 3 HOH HOH 247 A HOH 9 3 HOH HOH 248 A HOH 7 3 HOH HOH 249 A HOH 12 3 HOH HOH 250 A HOH 10 3 HOH HOH 251 A HOH 62 3 HOH HOH 252 A HOH 80 3 HOH HOH 253 A HOH 28 3 HOH HOH 254 A HOH 84 3 HOH HOH 255 A HOH 18 3 HOH HOH 256 A HOH 95 3 HOH HOH 257 A HOH 5 3 HOH HOH 258 A HOH 29 3 HOH HOH 259 A HOH 78 3 HOH HOH 260 A HOH 94 3 HOH HOH 261 A HOH 37 3 HOH HOH 262 A HOH 27 3 HOH HOH 263 A HOH 23 3 HOH HOH 264 A HOH 70 3 HOH HOH 265 A HOH 34 3 HOH HOH 266 A HOH 75 3 HOH HOH 267 A HOH 44 3 HOH HOH 268 A HOH 53 3 HOH HOH 269 A HOH 3 3 HOH HOH 270 A HOH 64 3 HOH HOH 271 A HOH 81 3 HOH HOH 272 A HOH 48 3 HOH HOH 273 A HOH 97 3 HOH HOH 274 A HOH 47 3 HOH HOH 275 A HOH 100 3 HOH HOH 276 A HOH 52 3 HOH HOH 277 A HOH 68 3 HOH HOH 278 A HOH 86 3 HOH HOH 279 A HOH 39 3 HOH HOH 280 A HOH 46 3 HOH HOH 281 A HOH 102 3 HOH HOH 282 A HOH 103 3 HOH HOH 283 A GLY -1 n 1 GLY -1 A SER 0 n 2 SER 0 A MET 1 n 3 MET 1 A GLN 2 n 4 GLN 2 A ILE 3 n 5 ILE 3 A PHE 4 n 6 PHE 4 A VAL 5 n 7 VAL 5 A LYS 6 n 8 LYS 6 A PHE 7 n 9 PHE 7 A ARG 8 n 10 ARG 8 A THR 9 n 11 THR 9 A GLY 10 n 12 GLY 10 A LYS 11 n 13 LYS 11 A THR 12 n 14 THR 12 A TYR 13 n 15 TYR 13 A THR 14 n 16 THR 14 A LEU 15 n 17 LEU 15 A GLU 16 n 18 GLU 16 A VAL 17 n 19 VAL 17 A GLU 18 n 20 GLU 18 A PRO 19 n 21 PRO 19 A SER 20 n 22 SER 20 A ASP 21 n 23 ASP 21 A THR 22 n 24 THR 22 A ILE 23 n 25 ILE 23 A GLU 24 n 26 GLU 24 A ASN 25 n 27 ASN 25 A VAL 26 n 28 VAL 26 A LYS 27 n 29 LYS 27 A ALA 28 n 30 ALA 28 A LYS 29 n 31 LYS 29 A ILE 30 n 32 ILE 30 A GLN 31 n 33 GLN 31 A ASP 32 n 34 ASP 32 A LYS 33 n 35 LYS 33 A LEU 34 n 36 LEU 34 A GLY 35 n 37 GLY 35 A ILE 36 n 38 ILE 36 A PRO 37 n 39 PRO 37 A PRO 38 n 40 PRO 38 A ASP 39 n 41 ASP 39 A GLN 40 n 42 GLN 40 A GLN 41 n 43 GLN 41 A TRP 42 n 44 TRP 42 A LEU 43 n 45 LEU 43 A ILE 44 n 46 ILE 44 A PHE 45 n 47 PHE 45 A ALA 46 n 48 ALA 46 A GLY 47 n 49 GLY 47 A LYS 48 n 50 LYS 48 A ARG 49 n 51 ARG 49 A LEU 50 n 52 LEU 50 A GLU 51 n 53 GLU 51 A ASP 52 n 54 ASP 52 A GLY 53 n 55 GLY 53 A ARG 54 n 56 ARG 54 A THR 55 n 57 THR 55 A LEU 56 n 58 LEU 56 A SER 57 n 59 SER 57 A ASP 58 n 60 ASP 58 A TYR 59 n 61 TYR 59 A ASN 60 n 62 ASN 60 A ILE 61 n 63 ILE 61 A GLN 62 n 64 GLN 62 A LYS 63 n 65 LYS 63 A GLU 64 n 66 GLU 64 A SER 65 n 67 SER 65 A THR 66 n 68 THR 66 A LEU 67 n 69 LEU 67 A ARG 68 n 70 ARG 68 A GLY 69 n 71 GLY 69 A VAL 70 n 72 VAL 70 A ARG 71 n 73 ARG 71 A ARG 72 n 74 ARG 72 A LEU 73 n 75 LEU 73 A n 76 74 A n 77 75 A n 78 76 A author_defined_assembly 1 monomeric software_defined_assembly PISA 2 dimeric 1720 -55 8350 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 17 A O VAL 19 A N MET 1 A N MET 3 A N PHE 4 A N PHE 6 A O LEU 67 A O LEU 69 A O ARG 68 A O ARG 70 A N ILE 44 A N ILE 46 A N PHE 45 A N PHE 47 A O LYS 48 A O LYS 50 1 A SO4 102 C SO4 1 A ARG 74 A ARG 76 1 Y 1 A GLY 75 A GLY 77 1 Y 1 A GLY 76 A GLY 78 1 Y 1 A A OE2 O GLU HOH 16 201 2.05 A 47.740 11.3588 4.570 0.1211 0.1032 0.1042 1.0800 38.0360 1574 27008 5.8300 99.6500 0.0600 1 FREE R-VALUE 1.370 MOLECULAR REPLACEMENT 9.4300 0.9000 1.1100 1UQB 1.0800 38.0360 101 718 17.13 23.40 10 0 607 75 0.009 1267 1.049 1691 0.081 188 0.008 211 14.008 490 0.1618 0.1207 1.1149 137 2231 2368 11 97.0000 0.1393 0.0902 1.1548 140 2309 2449 11 100.0000 0.1039 0.0786 1.2010 141 2279 2420 11 100.0000 0.1081 0.0771 1.2557 145 2289 2434 11 100.0000 0.1072 0.0756 1.3219 144 2274 2418 11 100.0000 0.1120 0.0744 1.4047 141 2296 2437 11 100.0000 0.1069 0.0763 1.5131 146 2325 2471 11 100.0000 0.1048 0.0809 1.6654 137 2298 2435 11 100.0000 0.1078 0.0899 1.9064 146 2347 2493 11 100.0000 0.1141 0.1037 2.4018 144 2348 2492 11 100.0000 0.1384 0.1331 38.0594 153 2438 2591 11 99.0000 8.960 1.080 38.04 5TOG 27011 -3.000 1.000 0.047 1 28.210 11.5 99.700 0.491 1.080 1.110 4.220 0.909 1 96.800 0.362 1.110 1.140 6.560 0.964 1 99.900 0.293 1.140 1.170 8.220 0.976 1 100.000 0.236 1.170 1.210 10.270 0.985 1 100.000 0.208 1.210 1.250 11.920 0.988 1 100.000 0.179 1.250 1.290 13.990 0.991 1 100.000 0.165 1.290 1.340 15.060 0.993 1 100.000 0.128 1.340 1.390 19.680 0.995 1 100.000 0.109 1.390 1.460 23.070 0.996 1 100.000 0.086 1.460 1.530 28.350 0.998 1 100.000 0.070 1.530 1.610 33.330 0.998 1 100.000 0.060 1.610 1.710 38.840 0.999 1 100.000 0.049 1.710 1.830 46.560 0.999 1 100.000 0.040 1.830 1.970 52.740 0.999 1 100.000 0.036 1.970 2.160 59.960 0.999 1 100.000 0.033 2.160 2.420 64.360 0.999 1 100.000 0.030 2.420 2.790 68.610 1.000 1 99.800 0.027 2.790 3.420 73.960 1.000 1 100.000 0.026 3.420 4.830 74.380 0.999 1 99.200 0.026 4.830 38.04 71.290 0.999 1 95.500 data reduction XDS data scaling XSCALE refinement PHENIX 1.11_2556 data extraction PDB_EXTRACT 3.20 N Room temperature structure of ubiquitin variant u7ub25.2540 1 N N 2 N N 2 N N 3 N N A THR 22 A THR 24 HELX_P A GLY 35 A GLY 37 1 AA1 14 A PRO 37 A PRO 39 HELX_P A ASP 39 A ASP 41 5 AA2 3 SIGNALING PROTEIN COMPUTATIONALLY DESIGNED UBIQUITIN, USP7, SIGNALING PROTEIN UBB_HUMAN UNP 1 75 P0CG47 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 75 152 5TOG -1 76 P0CG47 A 1 1 78 1 GLY conflict SER 0 5TOG A P0CG47 UNP 76 2 1 THR conflict PHE 7 5TOG A P0CG47 UNP 83 9 1 LEU conflict ARG 8 5TOG A P0CG47 UNP 84 10 1 ILE conflict TYR 13 5TOG A P0CG47 UNP 89 15 1 GLU conflict LEU 34 5TOG A P0CG47 UNP 110 36 1 ARG conflict TRP 42 5TOG A P0CG47 UNP 118 44 1 GLN conflict ARG 49 5TOG A P0CG47 UNP 125 51 1 HIS conflict ARG 68 5TOG A P0CG47 UNP 144 70 1 LEU conflict GLY 69 5TOG A P0CG47 UNP 145 71 1 LEU conflict ARG 71 5TOG A P0CG47 UNP 147 73 5 anti-parallel parallel anti-parallel anti-parallel A THR 12 A THR 14 A VAL 17 A VAL 19 A MET 1 A MET 3 A LYS 6 A LYS 8 A THR 66 A THR 68 A ARG 71 A ARG 73 A GLN 41 A GLN 43 A PHE 45 A PHE 47 A LYS 48 A LYS 50 A ARG 49 A ARG 51 binding site for residue SO4 A 101 A SO4 101 Software 7 binding site for residue SO4 A 102 A SO4 102 Software 11 A GLY -1 A GLY 1 7 4_555 A THR 22 A THR 24 7 1_555 A ASN 25 A ASN 27 7 1_555 A LYS 63 A LYS 65 7 2_555 A HOH 255 D HOH 7 1_555 A HOH 260 D HOH 7 1_555 A HOH 265 D HOH 7 2_555 A THR 14 A THR 16 11 1_555 A THR 14 A THR 16 11 4_555 A LYS 33 A LYS 35 11 4_555 A LYS 33 A LYS 35 11 1_555 A GLY 47 A GLY 49 11 5_444 A HOH 202 D HOH 11 1_555 A HOH 202 D HOH 11 4_555 A HOH 227 D HOH 11 1_555 A HOH 227 D HOH 11 4_555 A HOH 232 D HOH 11 4_555 A HOH 232 D HOH 11 1_555 152 P 31 2 1