0.019649
0.000000
0.000000
0.000000
0.013629
0.000000
0.000000
0.000000
0.009513
0.000000
0.000000
0.000000
Fischer, M.
Shoichet, B.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
50.894
73.372
105.123
C9 H9 N3
159.188
(4E)-4-hydrazinylidene-1,4-dihydroquinoline
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
N
N
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
N
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
N
N
23
S
C
N
24
N
C
N
25
N
O
N
26
N
C
N
27
N
O
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
N
N
36
S
C
N
37
N
C
N
38
N
O
N
39
N
C
N
40
N
C
N
41
N
C
N
42
N
N
N
43
N
C
N
44
N
N
N
45
N
N
N
46
N
O
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
N
N
63
S
C
N
64
N
C
N
65
N
O
N
66
N
C
N
67
N
C
N
68
N
O
N
69
N
N
N
70
N
O
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
N
N
80
S
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
O
N
86
N
O
N
87
N
O
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
R
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
S
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
N
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
C
N
159
N
C
N
160
N
C
N
161
N
C
Y
162
N
C
Y
163
N
C
Y
164
N
C
Y
165
N
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
O
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
C
N
178
N
C
Y
179
N
C
Y
180
N
C
Y
181
N
C
Y
182
N
C
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
C
N
193
N
C
N
194
N
O
N
195
N
O
Y
196
N
N
N
197
N
N
Y
198
N
N
N
199
N
N
N
200
N
FE
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
Y
238
N
C
Y
239
N
N
Y
240
N
C
Y
241
N
C
Y
242
N
N
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
O
N
255
N
H
N
256
N
H
N
257
N
N
N
258
S
C
N
259
N
C
N
260
N
O
N
261
S
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
O
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
N
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
S
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
O
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
R
C
N
405
N
O
N
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
N
N
418
S
C
N
419
N
C
N
420
N
O
N
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
N
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
N
N
445
S
C
N
446
N
C
N
447
N
O
N
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
Y
454
N
C
N
455
N
O
N
456
N
O
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
N
N
469
S
C
N
470
N
C
N
471
N
O
N
472
N
C
N
473
N
C
N
474
N
C
N
475
N
O
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
1
N
sing
N
2
E
doub
Y
3
N
doub
Y
4
N
sing
N
5
N
sing
N
6
N
sing
Y
7
N
sing
Y
8
N
doub
N
9
N
doub
Y
10
N
doub
Y
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
doub
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
doub
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
doub
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
Y
163
N
doub
Y
164
N
sing
Y
165
N
sing
N
166
N
sing
Y
167
N
doub
N
168
N
sing
Y
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
Y
195
N
sing
Y
196
N
sing
Y
197
N
doub
N
198
N
sing
Y
199
N
sing
N
200
N
sing
Y
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
Y
244
N
sing
Y
245
N
doub
Y
246
N
doub
N
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
Y
352
N
doub
Y
353
N
sing
Y
354
N
sing
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
doub
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
Y
421
N
doub
Y
422
N
sing
Y
423
N
sing
N
424
N
sing
Y
425
N
doub
Y
426
N
sing
Y
427
N
sing
N
428
N
sing
Y
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
doub
N
433
N
sing
Y
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
doub
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
Y
449
N
doub
Y
450
N
sing
Y
451
N
sing
N
452
N
sing
Y
453
N
doub
N
454
N
sing
Y
455
N
doub
N
456
N
sing
Y
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
doub
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
US
Proc. Natl. Acad. Sci. U.S.A.
PNASA6
0040
1091-6490
114
E6839
E6846
10.1073/pnas.1703287114
28760952
Testing inhomogeneous solvation theory in structure-based ligand discovery.
2017
UK
Nat Chem
1755-4349
6
575
583
10.1038/nchem.1954
24950326
Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery.
2014
10.2210/pdb5u60/pdb
pdb_00005u60
100
1
PIXEL
2016-08-13
DECTRIS PILATUS3 6M
KOHZU DUAL DOUBLE CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
1.1158
1.0
8.3.1
ALS
1.1158
SYNCHROTRON
ALS BEAMLINE 8.3.1
32928.582
Peroxidase
1.11.1.-
P190G, W191G
1
man
polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
159.188
(4E)-4-hydrazinylidene-1,4-dihydroquinoline
1
syn
non-polymer
18.015
water
226
nat
water
no
no
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYL
SIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGGGANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYL
SIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
RM11-1a
sample
1
289
SCRG_04081
285006
Saccharomyces cerevisiae (strain RM11-1a)
469008
Escherichia coli
BL21(DE3)
plasmid
Biological sequence
1
2.93
57.98
0.000
VAPOR DIFFUSION, HANGING DROP
6
Compound soaked into crystal grown in equal volume of 500mM MES buffer (pH 6.0) and 25% MPD
283
citation
citation_author
citation
citation_author
citation
pdbx_audit_support
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Database references
Database references
Database references
Author supporting evidence
Author supporting evidence
Data collection
Database references
1
0
2017-02-01
1
1
2017-08-02
1
2
2017-08-16
1
3
2017-08-23
1
4
2017-09-20
1
5
2020-01-01
1
6
2024-03-06
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
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_citation.pdbx_database_id_DOI
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_pdbx_audit_support.funding_organization
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_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM59957 OD009180 GM110580
N
RCSB
Y
RCSB
2016-12-07
REL
REL
HEM
PROTOPORPHYRIN IX CONTAINING FE
7VS
(4E)-4-hydrazinylidene-1,4-dihydroquinoline
HOH
water
HEM
1
2
HEM
HEM
301
A
027
1
3
7VS
7VS
302
A
HOH
153
4
HOH
HOH
401
A
HOH
201
4
HOH
HOH
402
A
HOH
155
4
HOH
HOH
403
A
HOH
183
4
HOH
HOH
404
A
HOH
177
4
HOH
HOH
405
A
HOH
111
4
HOH
HOH
406
A
HOH
82
4
HOH
HOH
407
A
HOH
48
4
HOH
HOH
408
A
HOH
113
4
HOH
HOH
409
A
HOH
64
4
HOH
HOH
410
A
HOH
168
4
HOH
HOH
411
A
HOH
57
4
HOH
HOH
412
A
HOH
53
4
HOH
HOH
413
A
HOH
117
4
HOH
HOH
414
A
HOH
103
4
HOH
HOH
415
A
HOH
105
4
HOH
HOH
416
A
HOH
210
4
HOH
HOH
417
A
HOH
7
4
HOH
HOH
418
A
HOH
90
4
HOH
HOH
419
A
HOH
108
4
HOH
HOH
420
A
HOH
209
4
HOH
HOH
421
A
HOH
202
4
HOH
HOH
422
A
HOH
121
4
HOH
HOH
423
A
HOH
72
4
HOH
HOH
424
A
HOH
219
4
HOH
HOH
425
A
HOH
94
4
HOH
HOH
426
A
HOH
68
4
HOH
HOH
427
A
HOH
51
4
HOH
HOH
428
A
HOH
161
4
HOH
HOH
429
A
HOH
208
4
HOH
HOH
430
A
HOH
38
4
HOH
HOH
431
A
HOH
205
4
HOH
HOH
432
A
HOH
9
4
HOH
HOH
433
A
HOH
194
4
HOH
HOH
434
A
HOH
69
4
HOH
HOH
435
A
HOH
67
4
HOH
HOH
436
A
HOH
125
4
HOH
HOH
437
A
HOH
145
4
HOH
HOH
438
A
HOH
120
4
HOH
HOH
439
A
HOH
178
4
HOH
HOH
440
A
HOH
42
4
HOH
HOH
441
A
HOH
222
4
HOH
HOH
442
A
HOH
3
4
HOH
HOH
443
A
HOH
32
4
HOH
HOH
444
A
HOH
122
4
HOH
HOH
445
A
HOH
30
4
HOH
HOH
446
A
HOH
142
4
HOH
HOH
447
A
HOH
33
4
HOH
HOH
448
A
HOH
24
4
HOH
HOH
449
A
HOH
21
4
HOH
HOH
450
A
HOH
136
4
HOH
HOH
451
A
HOH
45
4
HOH
HOH
452
A
HOH
26
4
HOH
HOH
453
A
HOH
62
4
HOH
HOH
454
A
HOH
70
4
HOH
HOH
455
A
HOH
40
4
HOH
HOH
456
A
HOH
186
4
HOH
HOH
457
A
HOH
169
4
HOH
HOH
458
A
HOH
92
4
HOH
HOH
459
A
HOH
88
4
HOH
HOH
460
A
HOH
12
4
HOH
HOH
461
A
HOH
107
4
HOH
HOH
462
A
HOH
188
4
HOH
HOH
463
A
HOH
126
4
HOH
HOH
464
A
HOH
27
4
HOH
HOH
465
A
HOH
76
4
HOH
HOH
466
A
HOH
14
4
HOH
HOH
467
A
HOH
16
4
HOH
HOH
468
A
HOH
77
4
HOH
HOH
469
A
HOH
225
4
HOH
HOH
470
A
HOH
20
4
HOH
HOH
471
A
HOH
47
4
HOH
HOH
472
A
HOH
87
4
HOH
HOH
473
A
HOH
134
4
HOH
HOH
474
A
HOH
118
4
HOH
HOH
475
A
HOH
106
4
HOH
HOH
476
A
HOH
73
4
HOH
HOH
477
A
HOH
187
4
HOH
HOH
478
A
HOH
175
4
HOH
HOH
479
A
HOH
17
4
HOH
HOH
480
A
HOH
116
4
HOH
HOH
481
A
HOH
152
4
HOH
HOH
482
A
HOH
133
4
HOH
HOH
483
A
HOH
83
4
HOH
HOH
484
A
HOH
31
4
HOH
HOH
485
A
HOH
124
4
HOH
HOH
486
A
HOH
59
4
HOH
HOH
487
A
HOH
149
4
HOH
HOH
488
A
HOH
109
4
HOH
HOH
489
A
HOH
63
4
HOH
HOH
490
A
HOH
11
4
HOH
HOH
491
A
HOH
193
4
HOH
HOH
492
A
HOH
80
4
HOH
HOH
493
A
HOH
84
4
HOH
HOH
494
A
HOH
39
4
HOH
HOH
495
A
HOH
19
4
HOH
HOH
496
A
HOH
29
4
HOH
HOH
497
A
HOH
75
4
HOH
HOH
498
A
HOH
2
4
HOH
HOH
499
A
HOH
190
4
HOH
HOH
500
A
HOH
23
4
HOH
HOH
501
A
HOH
52
4
HOH
HOH
502
A
HOH
130
4
HOH
HOH
503
A
HOH
123
4
HOH
HOH
504
A
HOH
220
4
HOH
HOH
505
A
HOH
58
4
HOH
HOH
506
A
HOH
55
4
HOH
HOH
507
A
HOH
101
4
HOH
HOH
508
A
HOH
104
4
HOH
HOH
509
A
HOH
97
4
HOH
HOH
510
A
HOH
96
4
HOH
HOH
511
A
HOH
1
4
HOH
HOH
512
A
HOH
10
4
HOH
HOH
513
A
HOH
35
4
HOH
HOH
514
A
HOH
54
4
HOH
HOH
515
A
HOH
49
4
HOH
HOH
516
A
HOH
137
4
HOH
HOH
517
A
HOH
74
4
HOH
HOH
518
A
HOH
13
4
HOH
HOH
519
A
HOH
150
4
HOH
HOH
520
A
HOH
5
4
HOH
HOH
521
A
HOH
229
4
HOH
HOH
522
A
HOH
163
4
HOH
HOH
523
A
HOH
85
4
HOH
HOH
524
A
HOH
89
4
HOH
HOH
525
A
HOH
141
4
HOH
HOH
526
A
HOH
18
4
HOH
HOH
527
A
HOH
81
4
HOH
HOH
528
A
HOH
159
4
HOH
HOH
529
A
HOH
138
4
HOH
HOH
530
A
HOH
192
4
HOH
HOH
531
A
HOH
218
4
HOH
HOH
532
A
HOH
15
4
HOH
HOH
533
A
HOH
148
4
HOH
HOH
534
A
HOH
100
4
HOH
HOH
535
A
HOH
174
4
HOH
HOH
536
A
HOH
56
4
HOH
HOH
537
A
HOH
22
4
HOH
HOH
538
A
HOH
191
4
HOH
HOH
539
A
HOH
112
4
HOH
HOH
540
A
HOH
8
4
HOH
HOH
541
A
HOH
102
4
HOH
HOH
542
A
HOH
110
4
HOH
HOH
543
A
HOH
78
4
HOH
HOH
544
A
HOH
4
4
HOH
HOH
545
A
HOH
98
4
HOH
HOH
546
A
HOH
223
4
HOH
HOH
547
A
HOH
171
4
HOH
HOH
548
A
HOH
140
4
HOH
HOH
549
A
HOH
6
4
HOH
HOH
550
A
HOH
119
4
HOH
HOH
551
A
HOH
66
4
HOH
HOH
552
A
HOH
28
4
HOH
HOH
553
A
HOH
200
4
HOH
HOH
554
A
HOH
132
4
HOH
HOH
555
A
HOH
71
4
HOH
HOH
556
A
HOH
203
4
HOH
HOH
557
A
HOH
154
4
HOH
HOH
558
A
HOH
151
4
HOH
HOH
559
A
HOH
43
4
HOH
HOH
560
A
HOH
146
4
HOH
HOH
561
A
HOH
86
4
HOH
HOH
562
A
HOH
167
4
HOH
HOH
563
A
HOH
213
4
HOH
HOH
564
A
HOH
160
4
HOH
HOH
565
A
HOH
99
4
HOH
HOH
566
A
HOH
50
4
HOH
HOH
567
A
HOH
79
4
HOH
HOH
568
A
HOH
228
4
HOH
HOH
569
A
HOH
143
4
HOH
HOH
570
A
HOH
129
4
HOH
HOH
571
A
HOH
135
4
HOH
HOH
572
A
HOH
65
4
HOH
HOH
573
A
HOH
34
4
HOH
HOH
574
A
HOH
60
4
HOH
HOH
575
A
HOH
170
4
HOH
HOH
576
A
HOH
139
4
HOH
HOH
577
A
HOH
41
4
HOH
HOH
578
A
HOH
115
4
HOH
HOH
579
A
HOH
131
4
HOH
HOH
580
A
HOH
61
4
HOH
HOH
581
A
HOH
93
4
HOH
HOH
582
A
HOH
44
4
HOH
HOH
583
A
HOH
156
4
HOH
HOH
584
A
HOH
230
4
HOH
HOH
585
A
HOH
37
4
HOH
HOH
586
A
HOH
25
4
HOH
HOH
587
A
HOH
199
4
HOH
HOH
588
A
HOH
144
4
HOH
HOH
589
A
HOH
224
4
HOH
HOH
590
A
HOH
180
4
HOH
HOH
591
A
HOH
166
4
HOH
HOH
592
A
HOH
189
4
HOH
HOH
593
A
HOH
173
4
HOH
HOH
594
A
HOH
91
4
HOH
HOH
595
A
HOH
164
4
HOH
HOH
596
A
HOH
217
4
HOH
HOH
597
A
HOH
185
4
HOH
HOH
598
A
HOH
181
4
HOH
HOH
599
A
HOH
147
4
HOH
HOH
600
A
HOH
179
4
HOH
HOH
601
A
HOH
216
4
HOH
HOH
602
A
HOH
184
4
HOH
HOH
603
A
HOH
198
4
HOH
HOH
604
A
HOH
176
4
HOH
HOH
605
A
HOH
214
4
HOH
HOH
606
A
HOH
204
4
HOH
HOH
607
A
HOH
206
4
HOH
HOH
608
A
HOH
215
4
HOH
HOH
609
A
HOH
221
4
HOH
HOH
610
A
HOH
195
4
HOH
HOH
611
A
HOH
196
4
HOH
HOH
612
A
HOH
172
4
HOH
HOH
613
A
HOH
95
4
HOH
HOH
614
A
HOH
227
4
HOH
HOH
615
A
HOH
46
4
HOH
HOH
616
A
HOH
128
4
HOH
HOH
617
A
HOH
211
4
HOH
HOH
618
A
HOH
226
4
HOH
HOH
619
A
HOH
212
4
HOH
HOH
620
A
HOH
157
4
HOH
HOH
621
A
HOH
207
4
HOH
HOH
622
A
HOH
197
4
HOH
HOH
623
A
HOH
165
4
HOH
HOH
624
A
HOH
182
4
HOH
HOH
625
A
HOH
114
4
HOH
HOH
626
A
6.640
6.640
45.810
45.810
Phaser MODE: MR_AUTO
LEU
4
n
1
LEU
4
A
VAL
5
n
2
VAL
5
A
HIS
6
n
3
HIS
6
A
VAL
7
n
4
VAL
7
A
ALA
8
n
5
ALA
8
A
SER
9
n
6
SER
9
A
VAL
10
n
7
VAL
10
A
GLU
11
n
8
GLU
11
A
LYS
12
n
9
LYS
12
A
GLY
13
n
10
GLY
13
A
ARG
14
n
11
ARG
14
A
SER
15
n
12
SER
15
A
TYR
16
n
13
TYR
16
A
GLU
17
n
14
GLU
17
A
ASP
18
n
15
ASP
18
A
PHE
19
n
16
PHE
19
A
GLN
20
n
17
GLN
20
A
LYS
21
n
18
LYS
21
A
VAL
22
n
19
VAL
22
A
TYR
23
n
20
TYR
23
A
ASN
24
n
21
ASN
24
A
ALA
25
n
22
ALA
25
A
ILE
26
n
23
ILE
26
A
ALA
27
n
24
ALA
27
A
LEU
28
n
25
LEU
28
A
LYS
29
n
26
LYS
29
A
LEU
30
n
27
LEU
30
A
ARG
31
n
28
ARG
31
A
GLU
32
n
29
GLU
32
A
ASP
33
n
30
ASP
33
A
ASP
34
n
31
ASP
34
A
GLU
35
n
32
GLU
35
A
TYR
36
n
33
TYR
36
A
ASP
37
n
34
ASP
37
A
ASN
38
n
35
ASN
38
A
TYR
39
n
36
TYR
39
A
ILE
40
n
37
ILE
40
A
GLY
41
n
38
GLY
41
A
TYR
42
n
39
TYR
42
A
GLY
43
n
40
GLY
43
A
PRO
44
n
41
PRO
44
A
VAL
45
n
42
VAL
45
A
LEU
46
n
43
LEU
46
A
VAL
47
n
44
VAL
47
A
ARG
48
n
45
ARG
48
A
LEU
49
n
46
LEU
49
A
ALA
50
n
47
ALA
50
A
TRP
51
n
48
TRP
51
A
HIS
52
n
49
HIS
52
A
ILE
53
n
50
ILE
53
A
SER
54
n
51
SER
54
A
GLY
55
n
52
GLY
55
A
THR
56
n
53
THR
56
A
TRP
57
n
54
TRP
57
A
ASP
58
n
55
ASP
58
A
LYS
59
n
56
LYS
59
A
HIS
60
n
57
HIS
60
A
ASP
61
n
58
ASP
61
A
ASN
62
n
59
ASN
62
A
THR
63
n
60
THR
63
A
GLY
64
n
61
GLY
64
A
GLY
65
n
62
GLY
65
A
SER
66
n
63
SER
66
A
TYR
67
n
64
TYR
67
A
GLY
68
n
65
GLY
68
A
GLY
69
n
66
GLY
69
A
THR
70
n
67
THR
70
A
TYR
71
n
68
TYR
71
A
ARG
72
n
69
ARG
72
A
PHE
73
n
70
PHE
73
A
LYS
74
n
71
LYS
74
A
LYS
75
n
72
LYS
75
A
GLU
76
n
73
GLU
76
A
PHE
77
n
74
PHE
77
A
ASN
78
n
75
ASN
78
A
ASP
79
n
76
ASP
79
A
PRO
80
n
77
PRO
80
A
SER
81
n
78
SER
81
A
ASN
82
n
79
ASN
82
A
ALA
83
n
80
ALA
83
A
GLY
84
n
81
GLY
84
A
LEU
85
n
82
LEU
85
A
GLN
86
n
83
GLN
86
A
ASN
87
n
84
ASN
87
A
GLY
88
n
85
GLY
88
A
PHE
89
n
86
PHE
89
A
LYS
90
n
87
LYS
90
A
PHE
91
n
88
PHE
91
A
LEU
92
n
89
LEU
92
A
GLU
93
n
90
GLU
93
A
PRO
94
n
91
PRO
94
A
ILE
95
n
92
ILE
95
A
HIS
96
n
93
HIS
96
A
LYS
97
n
94
LYS
97
A
GLU
98
n
95
GLU
98
A
PHE
99
n
96
PHE
99
A
PRO
100
n
97
PRO
100
A
TRP
101
n
98
TRP
101
A
ILE
102
n
99
ILE
102
A
SER
103
n
100
SER
103
A
SER
104
n
101
SER
104
A
GLY
105
n
102
GLY
105
A
ASP
106
n
103
ASP
106
A
LEU
107
n
104
LEU
107
A
PHE
108
n
105
PHE
108
A
SER
109
n
106
SER
109
A
LEU
110
n
107
LEU
110
A
GLY
111
n
108
GLY
111
A
GLY
112
n
109
GLY
112
A
VAL
113
n
110
VAL
113
A
THR
114
n
111
THR
114
A
ALA
115
n
112
ALA
115
A
VAL
116
n
113
VAL
116
A
GLN
117
n
114
GLN
117
A
GLU
118
n
115
GLU
118
A
MET
119
n
116
MET
119
A
GLN
120
n
117
GLN
120
A
GLY
121
n
118
GLY
121
A
PRO
122
n
119
PRO
122
A
LYS
123
n
120
LYS
123
A
ILE
124
n
121
ILE
124
A
PRO
125
n
122
PRO
125
A
TRP
126
n
123
TRP
126
A
ARG
127
n
124
ARG
127
A
CYS
128
n
125
CYS
128
A
GLY
129
n
126
GLY
129
A
ARG
130
n
127
ARG
130
A
VAL
131
n
128
VAL
131
A
ASP
132
n
129
ASP
132
A
THR
133
n
130
THR
133
A
PRO
134
n
131
PRO
134
A
GLU
135
n
132
GLU
135
A
ASP
136
n
133
ASP
136
A
THR
137
n
134
THR
137
A
THR
138
n
135
THR
138
A
PRO
139
n
136
PRO
139
A
ASP
140
n
137
ASP
140
A
ASN
141
n
138
ASN
141
A
GLY
142
n
139
GLY
142
A
ARG
143
n
140
ARG
143
A
LEU
144
n
141
LEU
144
A
PRO
145
n
142
PRO
145
A
ASP
146
n
143
ASP
146
A
ALA
147
n
144
ALA
147
A
ASP
148
n
145
ASP
148
A
LYS
149
n
146
LYS
149
A
ASP
150
n
147
ASP
150
A
ALA
151
n
148
ALA
151
A
GLY
152
n
149
GLY
152
A
TYR
153
n
150
TYR
153
A
VAL
154
n
151
VAL
154
A
ARG
155
n
152
ARG
155
A
THR
156
n
153
THR
156
A
PHE
157
n
154
PHE
157
A
PHE
158
n
155
PHE
158
A
GLN
159
n
156
GLN
159
A
ARG
160
n
157
ARG
160
A
LEU
161
n
158
LEU
161
A
ASN
162
n
159
ASN
162
A
MET
163
n
160
MET
163
A
ASN
164
n
161
ASN
164
A
ASP
165
n
162
ASP
165
A
ARG
166
n
163
ARG
166
A
GLU
167
n
164
GLU
167
A
VAL
168
n
165
VAL
168
A
VAL
169
n
166
VAL
169
A
ALA
170
n
167
ALA
170
A
LEU
171
n
168
LEU
171
A
MET
172
n
169
MET
172
A
GLY
173
n
170
GLY
173
A
ALA
174
n
171
ALA
174
A
HIS
175
n
172
HIS
175
A
ALA
176
n
173
ALA
176
A
LEU
177
n
174
LEU
177
A
GLY
178
n
175
GLY
178
A
LYS
179
n
176
LYS
179
A
THR
180
n
177
THR
180
A
HIS
181
n
178
HIS
181
A
LEU
182
n
179
LEU
182
A
LYS
183
n
180
LYS
183
A
ASN
184
n
181
ASN
184
A
SER
185
n
182
SER
185
A
GLY
186
n
183
GLY
186
A
TYR
187
n
184
TYR
187
A
GLU
188
n
185
GLU
188
A
GLY
189
n
186
GLY
189
A
GLY
190
n
187
GLY
190
A
GLY
191
n
188
GLY
191
A
ALA
192
n
189
ALA
192
A
ASN
193
n
190
ASN
193
A
ASN
194
n
191
ASN
194
A
VAL
195
n
192
VAL
195
A
PHE
196
n
193
PHE
196
A
THR
197
n
194
THR
197
A
ASN
198
n
195
ASN
198
A
GLU
199
n
196
GLU
199
A
PHE
200
n
197
PHE
200
A
TYR
201
n
198
TYR
201
A
LEU
202
n
199
LEU
202
A
ASN
203
n
200
ASN
203
A
LEU
204
n
201
LEU
204
A
LEU
205
n
202
LEU
205
A
ASN
206
n
203
ASN
206
A
GLU
207
n
204
GLU
207
A
ASP
208
n
205
ASP
208
A
TRP
209
n
206
TRP
209
A
LYS
210
n
207
LYS
210
A
LEU
211
n
208
LEU
211
A
GLU
212
n
209
GLU
212
A
LYS
213
n
210
LYS
213
A
ASN
214
n
211
ASN
214
A
ASP
215
n
212
ASP
215
A
ALA
216
n
213
ALA
216
A
ASN
217
n
214
ASN
217
A
ASN
218
n
215
ASN
218
A
GLU
219
n
216
GLU
219
A
GLN
220
n
217
GLN
220
A
TRP
221
n
218
TRP
221
A
ASP
222
n
219
ASP
222
A
SER
223
n
220
SER
223
A
LYS
224
n
221
LYS
224
A
SER
225
n
222
SER
225
A
GLY
226
n
223
GLY
226
A
TYR
227
n
224
TYR
227
A
MET
228
n
225
MET
228
A
MET
229
n
226
MET
229
A
LEU
230
n
227
LEU
230
A
PRO
231
n
228
PRO
231
A
THR
232
n
229
THR
232
A
ASP
233
n
230
ASP
233
A
TYR
234
n
231
TYR
234
A
SER
235
n
232
SER
235
A
LEU
236
n
233
LEU
236
A
ILE
237
n
234
ILE
237
A
GLN
238
n
235
GLN
238
A
ASP
239
n
236
ASP
239
A
PRO
240
n
237
PRO
240
A
LYS
241
n
238
LYS
241
A
TYR
242
n
239
TYR
242
A
LEU
243
n
240
LEU
243
A
SER
244
n
241
SER
244
A
ILE
245
n
242
ILE
245
A
VAL
246
n
243
VAL
246
A
LYS
247
n
244
LYS
247
A
GLU
248
n
245
GLU
248
A
TYR
249
n
246
TYR
249
A
ALA
250
n
247
ALA
250
A
ASN
251
n
248
ASN
251
A
ASP
252
n
249
ASP
252
A
GLN
253
n
250
GLN
253
A
ASP
254
n
251
ASP
254
A
LYS
255
n
252
LYS
255
A
PHE
256
n
253
PHE
256
A
PHE
257
n
254
PHE
257
A
LYS
258
n
255
LYS
258
A
ASP
259
n
256
ASP
259
A
PHE
260
n
257
PHE
260
A
SER
261
n
258
SER
261
A
LYS
262
n
259
LYS
262
A
ALA
263
n
260
ALA
263
A
PHE
264
n
261
PHE
264
A
GLU
265
n
262
GLU
265
A
LYS
266
n
263
LYS
266
A
LEU
267
n
264
LEU
267
A
LEU
268
n
265
LEU
268
A
GLU
269
n
266
GLU
269
A
ASN
270
n
267
ASN
270
A
GLY
271
n
268
GLY
271
A
ILE
272
n
269
ILE
272
A
THR
273
n
270
THR
273
A
PHE
274
n
271
PHE
274
A
PRO
275
n
272
PRO
275
A
LYS
276
n
273
LYS
276
A
ASP
277
n
274
ASP
277
A
ALA
278
n
275
ALA
278
A
PRO
279
n
276
PRO
279
A
SER
280
n
277
SER
280
A
PRO
281
n
278
PRO
281
A
PHE
282
n
279
PHE
282
A
ILE
283
n
280
ILE
283
A
PHE
284
n
281
PHE
284
A
LYS
285
n
282
LYS
285
A
THR
286
n
283
THR
286
A
LEU
287
n
284
LEU
287
A
GLU
288
n
285
GLU
288
A
GLU
289
n
286
GLU
289
A
GLN
290
n
287
GLN
290
A
GLY
291
n
288
GLY
291
A
LEU
292
n
289
LEU
292
A
author_and_software_defined_assembly
PISA
1
monomeric
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NA
HEM
1_555
94.0
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NB
HEM
1_555
90.6
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NB
HEM
1_555
88.4
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NC
HEM
1_555
90.7
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NC
HEM
1_555
175.4
A
HEM
301
B
NB
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
NC
HEM
1_555
91.4
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
95.6
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
90.4
A
HEM
301
B
NB
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
173.8
A
HEM
301
B
NC
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HEM
301
B
ND
HEM
1_555
89.3
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
416
D
O
HOH
1_555
174.1
A
HEM
301
B
NA
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
416
D
O
HOH
1_555
83.1
A
HEM
301
B
NB
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
416
D
O
HOH
1_555
84.2
A
HEM
301
B
NC
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
416
D
O
HOH
1_555
92.2
A
HEM
301
B
ND
HEM
1_555
A
HEM
301
B
FE
HEM
1_555
A
HOH
416
D
O
HOH
1_555
89.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
HIS
6
A
N
HIS
3
A
O
THR
273
A
O
THR
270
A
N
GLU
212
A
N
GLU
209
A
O
GLN
220
A
O
GLN
217
A
N
TRP
221
A
N
TRP
218
A
O
MET
229
A
O
MET
226
1
6.14
0.90
118.30
124.44
A
A
A
CB
CG
OD2
ASP
ASP
ASP
150
150
150
A
A
A
N
1
A
ASP
150
B
-109.12
-168.60
1
A
ALA
192
B
-151.97
47.64
1
A
ASP
252
-152.19
89.20
64.480
26.2874
14.350
0.1904
0.1537
0.1554
1.5000
45.8080
3102
63215
4.9100
99.1400
0.2200
1
FREE R-VALUE
1.330
MOLECULAR REPLACEMENT
20.5900
0.9000
1.1100
1.5000
45.8080
226
2609
22.35
34.79
12
0
2371
290
0.016
2583
1.419
3516
0.075
337
0.008
469
14.243
939
0.4883
0.0000
0.4178
1.5235
137
2306
2443
22
86.0000
0.3983
0.0000
0.3287
1.5484
116
2648
2764
22
97.0000
0.2718
0.0000
0.2845
1.5751
141
2678
2819
22
99.0000
0.3050
0.0000
0.2530
1.6038
171
2700
2871
22
100.0000
0.2394
0.0000
0.2152
1.6346
154
2691
2845
22
100.0000
0.2636
0.0000
0.2151
1.6680
149
2716
2865
22
100.0000
0.2603
0.0000
0.1912
1.7043
136
2741
2877
22
100.0000
0.2283
0.0000
0.1757
1.7439
136
2759
2895
22
100.0000
0.2134
0.0000
0.1658
1.7875
131
2703
2834
22
100.0000
0.2056
0.0000
0.1526
1.8359
144
2723
2867
22
100.0000
0.1864
0.0000
0.1466
1.8899
130
2756
2886
22
100.0000
0.2082
0.0000
0.1459
1.9509
146
2741
2887
22
100.0000
0.2038
0.0000
0.1437
2.0206
122
2748
2870
22
100.0000
0.1698
0.0000
0.1396
2.1015
136
2754
2890
22
100.0000
0.2081
0.0000
0.1346
2.1971
143
2745
2888
22
100.0000
0.1805
0.0000
0.1341
2.3130
133
2774
2907
22
100.0000
0.1736
0.0000
0.1400
2.4579
142
2762
2904
22
100.0000
0.1839
0.0000
0.1430
2.6476
140
2780
2920
22
100.0000
0.1665
0.0000
0.1497
2.9140
152
2770
2922
22
100.0000
0.1974
0.0000
0.1546
3.3356
152
2797
2949
22
100.0000
0.1543
0.0000
0.1404
4.2021
153
2837
2990
22
100.0000
0.1703
0.0000
0.1398
45.8293
138
2984
3122
22
100.0000
20.900
1.500
105.120
5U60
63695
1.000
0.066
0.020
0.069
1
14.900
742053
11.700
316
99.800
1.317
1.500
1.540
0.626
1
6.500
97.400
0.029
6.710
105.120
1.000
1
11.400
99.900
data scaling
Aimless
0.5.21
phasing
PHASER
2.6.1
refinement
PHENIX
data extraction
PDB_EXTRACT
3.22
data reduction
XDS
N
CcP gateless cavity
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
15
A
SER
12
HELX_P
A
ASP
33
A
ASP
30
1
AA1
19
A
GLU
35
A
GLU
32
HELX_P
A
ILE
40
A
ILE
37
1
AA2
6
A
TYR
42
A
TYR
39
HELX_P
A
GLY
55
A
GLY
52
1
AA3
14
A
GLY
69
A
GLY
66
HELX_P
A
ARG
72
A
ARG
69
5
AA4
4
A
PHE
73
A
PHE
70
HELX_P
A
ASN
78
A
ASN
75
1
AA5
6
A
ASP
79
A
ASP
76
HELX_P
A
GLY
84
A
GLY
81
5
AA6
6
A
LEU
85
A
LEU
82
HELX_P
A
PHE
99
A
PHE
96
1
AA7
15
A
SER
103
A
SER
100
HELX_P
A
MET
119
A
MET
116
1
AA8
17
A
PRO
134
A
PRO
131
HELX_P
A
THR
138
A
THR
135
5
AA9
5
A
ASP
150
A
ASP
147
HELX_P
A
ARG
160
A
ARG
157
1
AB1
11
A
ASN
164
A
ASN
161
HELX_P
A
GLY
173
A
GLY
170
1
AB2
10
A
ALA
174
A
ALA
171
HELX_P
A
LEU
177
A
LEU
174
5
AB3
4
A
HIS
181
A
HIS
178
HELX_P
A
GLY
186
A
GLY
183
1
AB4
6
A
ASN
198
A
ASN
195
HELX_P
A
GLU
207
A
GLU
204
1
AB5
10
A
LEU
230
A
LEU
227
HELX_P
A
ASP
239
A
ASP
236
1
AB6
10
A
ASP
239
A
ASP
236
HELX_P
A
ASN
251
A
ASN
248
1
AB7
13
A
ASP
252
A
ASP
249
HELX_P
A
ASN
270
A
ASN
267
1
AB8
19
A
THR
286
A
THR
283
HELX_P
A
GLY
291
A
GLY
288
1
AB9
6
metalc
2.132
A
HIS
175
A
NE2
HIS
172
1_555
A
HEM
301
B
FE
HEM
1_555
metalc
2.253
A
HEM
301
B
FE
HEM
1_555
A
HOH
416
D
O
HOH
1_555
OXIDOREDUCTASE
Model system, Cytochrome c Peroxidase, GIST, water, desolvation, docking, ligand binding, OXIDOREDUCTASE
B3LRE1_YEAS1
UNP
1
72
B3LRE1
LVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPSNA
GLQNGFKFLEPIHKEFPWISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAGYVRTFFQRLNM
NDREVVALMGAHALGKTHLKNSGYEGPWGAANNVFTNEFYLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPK
YLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAPSPFIFKTLEEQGL
72
362
5U60
4
292
B3LRE1
A
1
1
289
1
PRO
engineered mutation
GLY
190
5U60
A
B3LRE1
UNP
258
187
1
TRP
engineered mutation
GLY
191
5U60
A
B3LRE1
UNP
259
188
1
GLY
deletion
5U60
A
B3LRE1
UNP
260
1
ALA
deletion
5U60
A
B3LRE1
UNP
261
2
3
parallel
anti-parallel
anti-parallel
A
HIS
6
A
HIS
3
A
VAL
7
A
VAL
4
A
ILE
272
A
ILE
269
A
THR
273
A
THR
270
A
TRP
209
A
TRP
206
A
LYS
213
A
LYS
210
A
GLU
219
A
GLU
216
A
SER
223
A
SER
220
A
MET
228
A
MET
225
A
MET
229
A
MET
226
binding site for residue HEM A 301
A
HEM
301
Software
23
binding site for residue 7VS A 302
A
7VS
302
Software
9
A
PRO
44
A
PRO
41
23
1_555
A
ARG
48
A
ARG
45
23
1_555
A
TRP
51
A
TRP
48
23
1_555
A
PRO
145
A
PRO
142
23
1_555
A
ASP
146
A
ASP
143
23
1_555
A
ALA
147
A
ALA
144
23
1_555
A
LEU
171
A
LEU
168
23
1_555
A
MET
172
A
MET
169
23
1_555
A
ALA
174
A
ALA
171
23
1_555
A
HIS
175
A
HIS
172
23
1_555
A
LEU
177
A
LEU
174
23
1_555
A
GLY
178
A
GLY
175
23
1_555
A
LYS
179
A
LYS
176
23
1_555
A
THR
180
A
THR
177
23
1_555
A
HIS
181
A
HIS
178
23
1_555
A
ASN
184
A
ASN
181
23
1_555
A
SER
185
A
SER
182
23
1_555
A
LEU
230
A
LEU
227
23
1_555
A
THR
232
A
THR
229
23
1_555
A
HOH
416
D
HOH
23
1_555
A
HOH
419
D
HOH
23
1_555
A
HOH
426
D
HOH
23
1_555
A
HOH
428
D
HOH
23
1_555
A
HIS
175
A
HIS
172
9
1_555
A
LEU
177
A
LEU
174
9
1_555
A
GLY
178
A
GLY
175
9
1_555
A
LYS
179
A
LYS
176
9
1_555
A
GLY
190
A
GLY
187
9
1_555
A
GLY
191
A
GLY
188
9
1_555
A
MET
228
A
MET
225
9
1_555
A
ASP
233
A
ASP
230
9
1_555
A
HOH
500
D
HOH
9
1_555
19
P 21 21 21