0.023739
0.000000
0.000000
0.000000
0.016820
0.000000
0.000000
0.000000
0.008677
0.000000
0.000000
0.000000
EMBER, S.W.
ZHU, J.-Y.
SCHONBRUNN, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.000
90.000
90.000
42.125
59.452
115.244
C27 H35 F2 N7 O3
543.609
4-[(9-cyclopentyl-7,7-difluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl)amino]-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O S
78.133
DIMETHYL SULFOXIDE
non-polymer
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C4 H10 O3
106.120
DI(HYDROXYETHYL)ETHER
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
N
8
N
C
N
9
N
C
N
10
N
C
N
11
N
C
Y
12
N
C
N
13
N
C
N
14
N
O
Y
15
N
C
N
16
N
N
Y
17
N
N
Y
18
N
C
N
19
N
N
N
20
N
C
N
21
N
O
N
22
N
C
N
23
N
F
N
24
N
F
N
25
N
N
N
26
N
C
N
27
N
C
N
28
N
C
Y
29
N
N
N
30
N
C
N
31
N
O
N
32
N
N
N
33
N
C
N
34
N
C
N
35
N
C
N
36
N
N
N
37
N
C
N
38
N
C
N
39
N
C
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
N
N
96
N
C
N
97
N
N
N
98
N
N
N
99
N
O
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
O
N
122
N
N
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
N
N
133
S
C
N
134
N
C
N
135
N
O
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
R
C
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
S
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
S
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
O
N
190
N
N
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
O
N
210
N
O
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
N
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
Y
236
N
C
Y
237
N
N
Y
238
N
C
Y
239
N
C
Y
240
N
N
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
S
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
N
N
300
S
C
N
301
N
C
N
302
N
O
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
N
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
N
329
N
C
N
330
N
S
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
N
C
N
389
N
C
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
R
C
N
420
N
O
N
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
N
N
433
S
C
N
434
N
C
N
435
N
O
N
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
N
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
Y
445
N
C
N
446
N
O
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
N
N
460
S
C
N
461
N
C
N
462
N
O
N
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
C
N
470
N
O
N
471
N
O
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
N
N
484
S
C
N
485
N
C
N
486
N
O
N
487
N
C
N
488
N
C
N
489
N
C
N
490
N
O
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
H
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
Y
17
N
doub
Y
18
N
sing
Y
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
Y
23
N
doub
N
24
N
sing
Y
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
Y
29
N
sing
N
30
N
sing
Y
31
N
doub
Y
32
N
sing
N
33
N
sing
N
34
N
sing
Y
35
N
sing
N
36
N
sing
Y
37
N
doub
N
38
N
sing
Y
39
N
doub
N
40
N
doub
Y
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
doub
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
Y
236
N
sing
Y
237
N
doub
Y
238
N
doub
N
239
N
sing
Y
240
N
sing
N
241
N
sing
Y
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
doub
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
Y
360
N
doub
Y
361
N
sing
Y
362
N
sing
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
Y
429
N
doub
Y
430
N
sing
Y
431
N
sing
N
432
N
sing
Y
433
N
doub
Y
434
N
sing
Y
435
N
sing
N
436
N
sing
Y
437
N
sing
Y
438
N
doub
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
doub
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
Y
457
N
doub
Y
458
N
sing
Y
459
N
sing
N
460
N
sing
Y
461
N
doub
N
462
N
sing
Y
463
N
doub
N
464
N
sing
Y
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
doub
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
10.1021/acs.jmedchem.1c01096
34710325
Differential BET Bromodomain Inhibition by Dihydropteridinone and Pyrimidodiazepinone Kinase Inhibitors.
2021
0000-0003-4985-3461
0000-0002-3589-3510
10.2210/pdb5vbp/pdb
pdb_00005vbp
100
1
CCD
2014-03-26
MARMOSAIC 225 mm CCD
ROSENBAUM-ROCK DOUBLE-CRYSTAL si(220)
SINGLE WAVELENGTH
M
x-ray
1
1.00
1.0
22-BM
APS
1.00
SYNCHROTRON
APS BEAMLINE 22-BM
15099.380
Bromodomain-containing protein 4
UNP RESIDUES 44-168
2
man
polymer
62.068
1,2-ETHANEDIOL
4
syn
non-polymer
106.120
DI(HYDROXYETHYL)ETHER
1
syn
non-polymer
543.609
4-[(9-cyclopentyl-7,7-difluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl)amino]-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide
2
syn
non-polymer
78.133
DIMETHYL SULFOXIDE
1
syn
non-polymer
18.015
water
228
nat
water
Protein HUNK1
no
no
SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN
AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN
AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
127
BRD4, HUNK1
9606
Homo sapiens
469008
ESCHERICHIA COLI
BL21(DE3)-R3
PLASMID
Biological sequence
PNIC28-BSA4
1
2.39
48.52
0.167
VAPOR DIFFUSION, HANGING DROP
7.5
12.5 MG/ML BRD4, 5MM HEPES PH 7.5, 50MM SODIUM CHLORIDE, 0.5MM DTT, 50MM TRIS PH8.5, 0.1M AMMONIUM, SULFATE, 12.5% PEG 3,350, 10% DMSO, 1 MM RO3280
291
pdbx_audit_support
citation
citation_author
database_2
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Author supporting evidence
Database references
Data collection
Refinement description
1
0
2018-04-04
1
1
2019-12-11
1
2
2021-11-17
1
3
2023-10-04
_pdbx_audit_support.funding_organization
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
United States
National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD)
HD076542-01S1
N
RCSB
Y
RCSB
2017-03-30
REL
REL
1
B
O
HOH
415
6.00
EDO
1,2-ETHANEDIOL
PEG
DI(HYDROXYETHYL)ETHER
79C
4-[(9-cyclopentyl-7,7-difluoro-5-methyl-6-oxo-6,7,8,9-tetrahydro-5H-pyrimido[4,5-b][1,4]diazepin-2-yl)amino]-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide
DMS
DIMETHYL SULFOXIDE
HOH
water
4O74
PDB
experimental model
EDO
1
2
EDO
EDO
201
A
EDO
4
2
EDO
EDO
202
A
PEG
1
3
PEG
PEG
203
A
LIG
1
4
79C
79C
204
A
EDO
2
2
EDO
EDO
201
B
EDO
3
2
EDO
EDO
202
B
DMS
1
5
DMS
DMS
203
B
LIG
2
4
79C
79C
204
B
HOH
20
6
HOH
HOH
301
A
HOH
110
6
HOH
HOH
302
A
HOH
40
6
HOH
HOH
303
A
HOH
87
6
HOH
HOH
304
A
HOH
161
6
HOH
HOH
305
A
HOH
69
6
HOH
HOH
306
A
HOH
127
6
HOH
HOH
307
A
HOH
191
6
HOH
HOH
308
A
HOH
180
6
HOH
HOH
309
A
HOH
1
6
HOH
HOH
310
A
HOH
116
6
HOH
HOH
311
A
HOH
132
6
HOH
HOH
312
A
HOH
145
6
HOH
HOH
313
A
HOH
21
6
HOH
HOH
314
A
HOH
107
6
HOH
HOH
315
A
HOH
2
6
HOH
HOH
316
A
HOH
133
6
HOH
HOH
317
A
HOH
147
6
HOH
HOH
318
A
HOH
221
6
HOH
HOH
319
A
HOH
120
6
HOH
HOH
320
A
HOH
106
6
HOH
HOH
321
A
HOH
75
6
HOH
HOH
322
A
HOH
68
6
HOH
HOH
323
A
HOH
219
6
HOH
HOH
324
A
HOH
15
6
HOH
HOH
325
A
HOH
182
6
HOH
HOH
326
A
HOH
12
6
HOH
HOH
327
A
HOH
72
6
HOH
HOH
328
A
HOH
117
6
HOH
HOH
329
A
HOH
101
6
HOH
HOH
330
A
HOH
178
6
HOH
HOH
331
A
HOH
11
6
HOH
HOH
332
A
HOH
57
6
HOH
HOH
333
A
HOH
199
6
HOH
HOH
334
A
HOH
5
6
HOH
HOH
335
A
HOH
22
6
HOH
HOH
336
A
HOH
8
6
HOH
HOH
337
A
HOH
82
6
HOH
HOH
338
A
HOH
119
6
HOH
HOH
339
A
HOH
7
6
HOH
HOH
340
A
HOH
156
6
HOH
HOH
341
A
HOH
9
6
HOH
HOH
342
A
HOH
118
6
HOH
HOH
343
A
HOH
19
6
HOH
HOH
344
A
HOH
141
6
HOH
HOH
345
A
HOH
204
6
HOH
HOH
346
A
HOH
4
6
HOH
HOH
347
A
HOH
146
6
HOH
HOH
348
A
HOH
76
6
HOH
HOH
349
A
HOH
176
6
HOH
HOH
350
A
HOH
115
6
HOH
HOH
351
A
HOH
6
6
HOH
HOH
352
A
HOH
64
6
HOH
HOH
353
A
HOH
226
6
HOH
HOH
354
A
HOH
142
6
HOH
HOH
355
A
HOH
202
6
HOH
HOH
356
A
HOH
59
6
HOH
HOH
357
A
HOH
105
6
HOH
HOH
358
A
HOH
97
6
HOH
HOH
359
A
HOH
23
6
HOH
HOH
360
A
HOH
205
6
HOH
HOH
361
A
HOH
17
6
HOH
HOH
362
A
HOH
168
6
HOH
HOH
363
A
HOH
98
6
HOH
HOH
364
A
HOH
171
6
HOH
HOH
365
A
HOH
135
6
HOH
HOH
366
A
HOH
10
6
HOH
HOH
367
A
HOH
70
6
HOH
HOH
368
A
HOH
91
6
HOH
HOH
369
A
HOH
100
6
HOH
HOH
370
A
HOH
13
6
HOH
HOH
371
A
HOH
157
6
HOH
HOH
372
A
HOH
212
6
HOH
HOH
373
A
HOH
55
6
HOH
HOH
374
A
HOH
3
6
HOH
HOH
375
A
HOH
122
6
HOH
HOH
376
A
HOH
177
6
HOH
HOH
377
A
HOH
175
6
HOH
HOH
378
A
HOH
104
6
HOH
HOH
379
A
HOH
25
6
HOH
HOH
380
A
HOH
14
6
HOH
HOH
381
A
HOH
88
6
HOH
HOH
382
A
HOH
163
6
HOH
HOH
383
A
HOH
79
6
HOH
HOH
384
A
HOH
16
6
HOH
HOH
385
A
HOH
197
6
HOH
HOH
386
A
HOH
220
6
HOH
HOH
387
A
HOH
190
6
HOH
HOH
388
A
HOH
131
6
HOH
HOH
389
A
HOH
84
6
HOH
HOH
390
A
HOH
194
6
HOH
HOH
391
A
HOH
203
6
HOH
HOH
392
A
HOH
201
6
HOH
HOH
393
A
HOH
60
6
HOH
HOH
394
A
HOH
209
6
HOH
HOH
395
A
HOH
198
6
HOH
HOH
396
A
HOH
148
6
HOH
HOH
397
A
HOH
99
6
HOH
HOH
398
A
HOH
174
6
HOH
HOH
399
A
HOH
128
6
HOH
HOH
400
A
HOH
140
6
HOH
HOH
401
A
HOH
126
6
HOH
HOH
402
A
HOH
143
6
HOH
HOH
403
A
HOH
200
6
HOH
HOH
404
A
HOH
183
6
HOH
HOH
405
A
HOH
51
6
HOH
HOH
406
A
HOH
196
6
HOH
HOH
407
A
HOH
167
6
HOH
HOH
408
A
HOH
164
6
HOH
HOH
409
A
HOH
165
6
HOH
HOH
410
A
HOH
151
6
HOH
HOH
411
A
HOH
166
6
HOH
HOH
412
A
HOH
158
6
HOH
HOH
413
A
HOH
73
6
HOH
HOH
301
B
HOH
139
6
HOH
HOH
302
B
HOH
27
6
HOH
HOH
303
B
HOH
74
6
HOH
HOH
304
B
HOH
108
6
HOH
HOH
305
B
HOH
52
6
HOH
HOH
306
B
HOH
56
6
HOH
HOH
307
B
HOH
92
6
HOH
HOH
308
B
HOH
35
6
HOH
HOH
309
B
HOH
153
6
HOH
HOH
310
B
HOH
114
6
HOH
HOH
311
B
HOH
83
6
HOH
HOH
312
B
HOH
58
6
HOH
HOH
313
B
HOH
172
6
HOH
HOH
314
B
HOH
66
6
HOH
HOH
315
B
HOH
103
6
HOH
HOH
316
B
HOH
192
6
HOH
HOH
317
B
HOH
134
6
HOH
HOH
318
B
HOH
31
6
HOH
HOH
319
B
HOH
67
6
HOH
HOH
320
B
HOH
206
6
HOH
HOH
321
B
HOH
124
6
HOH
HOH
322
B
HOH
181
6
HOH
HOH
323
B
HOH
222
6
HOH
HOH
324
B
HOH
111
6
HOH
HOH
325
B
HOH
48
6
HOH
HOH
326
B
HOH
37
6
HOH
HOH
327
B
HOH
136
6
HOH
HOH
328
B
HOH
41
6
HOH
HOH
329
B
HOH
81
6
HOH
HOH
330
B
HOH
80
6
HOH
HOH
331
B
HOH
137
6
HOH
HOH
332
B
HOH
29
6
HOH
HOH
333
B
HOH
47
6
HOH
HOH
334
B
HOH
138
6
HOH
HOH
335
B
HOH
34
6
HOH
HOH
336
B
HOH
44
6
HOH
HOH
337
B
HOH
53
6
HOH
HOH
338
B
HOH
189
6
HOH
HOH
339
B
HOH
125
6
HOH
HOH
340
B
HOH
155
6
HOH
HOH
341
B
HOH
49
6
HOH
HOH
342
B
HOH
207
6
HOH
HOH
343
B
HOH
61
6
HOH
HOH
344
B
HOH
18
6
HOH
HOH
345
B
HOH
43
6
HOH
HOH
346
B
HOH
94
6
HOH
HOH
347
B
HOH
32
6
HOH
HOH
348
B
HOH
46
6
HOH
HOH
349
B
HOH
65
6
HOH
HOH
350
B
HOH
228
6
HOH
HOH
351
B
HOH
159
6
HOH
HOH
352
B
HOH
162
6
HOH
HOH
353
B
HOH
77
6
HOH
HOH
354
B
HOH
36
6
HOH
HOH
355
B
HOH
63
6
HOH
HOH
356
B
HOH
89
6
HOH
HOH
357
B
HOH
71
6
HOH
HOH
358
B
HOH
39
6
HOH
HOH
359
B
HOH
85
6
HOH
HOH
360
B
HOH
184
6
HOH
HOH
361
B
HOH
54
6
HOH
HOH
362
B
HOH
216
6
HOH
HOH
363
B
HOH
149
6
HOH
HOH
364
B
HOH
28
6
HOH
HOH
365
B
HOH
121
6
HOH
HOH
366
B
HOH
38
6
HOH
HOH
367
B
HOH
86
6
HOH
HOH
368
B
HOH
195
6
HOH
HOH
369
B
HOH
214
6
HOH
HOH
370
B
HOH
90
6
HOH
HOH
371
B
HOH
213
6
HOH
HOH
372
B
HOH
93
6
HOH
HOH
373
B
HOH
33
6
HOH
HOH
374
B
HOH
42
6
HOH
HOH
375
B
HOH
26
6
HOH
HOH
376
B
HOH
78
6
HOH
HOH
377
B
HOH
160
6
HOH
HOH
378
B
HOH
24
6
HOH
HOH
379
B
HOH
102
6
HOH
HOH
380
B
HOH
95
6
HOH
HOH
381
B
HOH
185
6
HOH
HOH
382
B
HOH
45
6
HOH
HOH
383
B
HOH
129
6
HOH
HOH
384
B
HOH
50
6
HOH
HOH
385
B
HOH
173
6
HOH
HOH
386
B
HOH
217
6
HOH
HOH
387
B
HOH
109
6
HOH
HOH
388
B
HOH
30
6
HOH
HOH
389
B
HOH
186
6
HOH
HOH
390
B
HOH
210
6
HOH
HOH
391
B
HOH
211
6
HOH
HOH
392
B
HOH
187
6
HOH
HOH
393
B
HOH
179
6
HOH
HOH
394
B
HOH
62
6
HOH
HOH
395
B
HOH
227
6
HOH
HOH
396
B
HOH
193
6
HOH
HOH
397
B
HOH
150
6
HOH
HOH
398
B
HOH
169
6
HOH
HOH
399
B
HOH
123
6
HOH
HOH
400
B
HOH
112
6
HOH
HOH
401
B
HOH
188
6
HOH
HOH
402
B
HOH
130
6
HOH
HOH
403
B
HOH
154
6
HOH
HOH
404
B
HOH
223
6
HOH
HOH
405
B
HOH
215
6
HOH
HOH
406
B
HOH
218
6
HOH
HOH
407
B
HOH
208
6
HOH
HOH
408
B
HOH
113
6
HOH
HOH
409
B
HOH
152
6
HOH
HOH
410
B
HOH
225
6
HOH
HOH
411
B
HOH
96
6
HOH
HOH
412
B
HOH
224
6
HOH
HOH
413
B
HOH
170
6
HOH
HOH
414
B
HOH
144
6
HOH
HOH
415
B
SER
42
n
1
SER
42
A
MET
43
n
2
MET
43
A
ASN
44
n
3
ASN
44
A
PRO
45
n
4
PRO
45
A
PRO
46
n
5
PRO
46
A
PRO
47
n
6
PRO
47
A
PRO
48
n
7
PRO
48
A
GLU
49
n
8
GLU
49
A
THR
50
n
9
THR
50
A
SER
51
n
10
SER
51
A
ASN
52
n
11
ASN
52
A
PRO
53
n
12
PRO
53
A
ASN
54
n
13
ASN
54
A
LYS
55
n
14
LYS
55
A
PRO
56
n
15
PRO
56
A
LYS
57
n
16
LYS
57
A
ARG
58
n
17
ARG
58
A
GLN
59
n
18
GLN
59
A
THR
60
n
19
THR
60
A
ASN
61
n
20
ASN
61
A
GLN
62
n
21
GLN
62
A
LEU
63
n
22
LEU
63
A
GLN
64
n
23
GLN
64
A
TYR
65
n
24
TYR
65
A
LEU
66
n
25
LEU
66
A
LEU
67
n
26
LEU
67
A
ARG
68
n
27
ARG
68
A
VAL
69
n
28
VAL
69
A
VAL
70
n
29
VAL
70
A
LEU
71
n
30
LEU
71
A
LYS
72
n
31
LYS
72
A
THR
73
n
32
THR
73
A
LEU
74
n
33
LEU
74
A
TRP
75
n
34
TRP
75
A
LYS
76
n
35
LYS
76
A
HIS
77
n
36
HIS
77
A
GLN
78
n
37
GLN
78
A
PHE
79
n
38
PHE
79
A
ALA
80
n
39
ALA
80
A
TRP
81
n
40
TRP
81
A
PRO
82
n
41
PRO
82
A
PHE
83
n
42
PHE
83
A
GLN
84
n
43
GLN
84
A
GLN
85
n
44
GLN
85
A
PRO
86
n
45
PRO
86
A
VAL
87
n
46
VAL
87
A
ASP
88
n
47
ASP
88
A
ALA
89
n
48
ALA
89
A
VAL
90
n
49
VAL
90
A
LYS
91
n
50
LYS
91
A
LEU
92
n
51
LEU
92
A
ASN
93
n
52
ASN
93
A
LEU
94
n
53
LEU
94
A
PRO
95
n
54
PRO
95
A
ASP
96
n
55
ASP
96
A
TYR
97
n
56
TYR
97
A
TYR
98
n
57
TYR
98
A
LYS
99
n
58
LYS
99
A
ILE
100
n
59
ILE
100
A
ILE
101
n
60
ILE
101
A
LYS
102
n
61
LYS
102
A
THR
103
n
62
THR
103
A
PRO
104
n
63
PRO
104
A
MET
105
n
64
MET
105
A
ASP
106
n
65
ASP
106
A
MET
107
n
66
MET
107
A
GLY
108
n
67
GLY
108
A
THR
109
n
68
THR
109
A
ILE
110
n
69
ILE
110
A
LYS
111
n
70
LYS
111
A
LYS
112
n
71
LYS
112
A
ARG
113
n
72
ARG
113
A
LEU
114
n
73
LEU
114
A
GLU
115
n
74
GLU
115
A
ASN
116
n
75
ASN
116
A
ASN
117
n
76
ASN
117
A
TYR
118
n
77
TYR
118
A
TYR
119
n
78
TYR
119
A
TRP
120
n
79
TRP
120
A
ASN
121
n
80
ASN
121
A
ALA
122
n
81
ALA
122
A
GLN
123
n
82
GLN
123
A
GLU
124
n
83
GLU
124
A
CYS
125
n
84
CYS
125
A
ILE
126
n
85
ILE
126
A
GLN
127
n
86
GLN
127
A
ASP
128
n
87
ASP
128
A
PHE
129
n
88
PHE
129
A
ASN
130
n
89
ASN
130
A
THR
131
n
90
THR
131
A
MET
132
n
91
MET
132
A
PHE
133
n
92
PHE
133
A
THR
134
n
93
THR
134
A
ASN
135
n
94
ASN
135
A
CYS
136
n
95
CYS
136
A
TYR
137
n
96
TYR
137
A
ILE
138
n
97
ILE
138
A
TYR
139
n
98
TYR
139
A
ASN
140
n
99
ASN
140
A
LYS
141
n
100
LYS
141
A
PRO
142
n
101
PRO
142
A
GLY
143
n
102
GLY
143
A
ASP
144
n
103
ASP
144
A
ASP
145
n
104
ASP
145
A
ILE
146
n
105
ILE
146
A
VAL
147
n
106
VAL
147
A
LEU
148
n
107
LEU
148
A
MET
149
n
108
MET
149
A
ALA
150
n
109
ALA
150
A
GLU
151
n
110
GLU
151
A
ALA
152
n
111
ALA
152
A
LEU
153
n
112
LEU
153
A
GLU
154
n
113
GLU
154
A
LYS
155
n
114
LYS
155
A
LEU
156
n
115
LEU
156
A
PHE
157
n
116
PHE
157
A
LEU
158
n
117
LEU
158
A
GLN
159
n
118
GLN
159
A
LYS
160
n
119
LYS
160
A
ILE
161
n
120
ILE
161
A
ASN
162
n
121
ASN
162
A
GLU
163
n
122
GLU
163
A
LEU
164
n
123
LEU
164
A
PRO
165
n
124
PRO
165
A
THR
166
n
125
THR
166
A
GLU
167
n
126
GLU
167
A
GLU
168
n
127
GLU
168
A
SER
42
n
1
SER
42
B
MET
43
n
2
MET
43
B
ASN
44
n
3
ASN
44
B
PRO
45
n
4
PRO
45
B
PRO
46
n
5
PRO
46
B
PRO
47
n
6
PRO
47
B
PRO
48
n
7
PRO
48
B
GLU
49
n
8
GLU
49
B
THR
50
n
9
THR
50
B
SER
51
n
10
SER
51
B
ASN
52
n
11
ASN
52
B
PRO
53
n
12
PRO
53
B
ASN
54
n
13
ASN
54
B
LYS
55
n
14
LYS
55
B
PRO
56
n
15
PRO
56
B
LYS
57
n
16
LYS
57
B
ARG
58
n
17
ARG
58
B
GLN
59
n
18
GLN
59
B
THR
60
n
19
THR
60
B
ASN
61
n
20
ASN
61
B
GLN
62
n
21
GLN
62
B
LEU
63
n
22
LEU
63
B
GLN
64
n
23
GLN
64
B
TYR
65
n
24
TYR
65
B
LEU
66
n
25
LEU
66
B
LEU
67
n
26
LEU
67
B
ARG
68
n
27
ARG
68
B
VAL
69
n
28
VAL
69
B
VAL
70
n
29
VAL
70
B
LEU
71
n
30
LEU
71
B
LYS
72
n
31
LYS
72
B
THR
73
n
32
THR
73
B
LEU
74
n
33
LEU
74
B
TRP
75
n
34
TRP
75
B
LYS
76
n
35
LYS
76
B
HIS
77
n
36
HIS
77
B
GLN
78
n
37
GLN
78
B
PHE
79
n
38
PHE
79
B
ALA
80
n
39
ALA
80
B
TRP
81
n
40
TRP
81
B
PRO
82
n
41
PRO
82
B
PHE
83
n
42
PHE
83
B
GLN
84
n
43
GLN
84
B
GLN
85
n
44
GLN
85
B
PRO
86
n
45
PRO
86
B
VAL
87
n
46
VAL
87
B
ASP
88
n
47
ASP
88
B
ALA
89
n
48
ALA
89
B
VAL
90
n
49
VAL
90
B
LYS
91
n
50
LYS
91
B
LEU
92
n
51
LEU
92
B
ASN
93
n
52
ASN
93
B
LEU
94
n
53
LEU
94
B
PRO
95
n
54
PRO
95
B
ASP
96
n
55
ASP
96
B
TYR
97
n
56
TYR
97
B
TYR
98
n
57
TYR
98
B
LYS
99
n
58
LYS
99
B
ILE
100
n
59
ILE
100
B
ILE
101
n
60
ILE
101
B
LYS
102
n
61
LYS
102
B
THR
103
n
62
THR
103
B
PRO
104
n
63
PRO
104
B
MET
105
n
64
MET
105
B
ASP
106
n
65
ASP
106
B
MET
107
n
66
MET
107
B
GLY
108
n
67
GLY
108
B
THR
109
n
68
THR
109
B
ILE
110
n
69
ILE
110
B
LYS
111
n
70
LYS
111
B
LYS
112
n
71
LYS
112
B
ARG
113
n
72
ARG
113
B
LEU
114
n
73
LEU
114
B
GLU
115
n
74
GLU
115
B
ASN
116
n
75
ASN
116
B
ASN
117
n
76
ASN
117
B
TYR
118
n
77
TYR
118
B
TYR
119
n
78
TYR
119
B
TRP
120
n
79
TRP
120
B
ASN
121
n
80
ASN
121
B
ALA
122
n
81
ALA
122
B
GLN
123
n
82
GLN
123
B
GLU
124
n
83
GLU
124
B
CYS
125
n
84
CYS
125
B
ILE
126
n
85
ILE
126
B
GLN
127
n
86
GLN
127
B
ASP
128
n
87
ASP
128
B
PHE
129
n
88
PHE
129
B
ASN
130
n
89
ASN
130
B
THR
131
n
90
THR
131
B
MET
132
n
91
MET
132
B
PHE
133
n
92
PHE
133
B
THR
134
n
93
THR
134
B
ASN
135
n
94
ASN
135
B
CYS
136
n
95
CYS
136
B
TYR
137
n
96
TYR
137
B
ILE
138
n
97
ILE
138
B
TYR
139
n
98
TYR
139
B
ASN
140
n
99
ASN
140
B
LYS
141
n
100
LYS
141
B
PRO
142
n
101
PRO
142
B
GLY
143
n
102
GLY
143
B
ASP
144
n
103
ASP
144
B
ASP
145
n
104
ASP
145
B
ILE
146
n
105
ILE
146
B
VAL
147
n
106
VAL
147
B
LEU
148
n
107
LEU
148
B
MET
149
n
108
MET
149
B
ALA
150
n
109
ALA
150
B
GLU
151
n
110
GLU
151
B
ALA
152
n
111
ALA
152
B
LEU
153
n
112
LEU
153
B
GLU
154
n
113
GLU
154
B
LYS
155
n
114
LYS
155
B
LEU
156
n
115
LEU
156
B
PHE
157
n
116
PHE
157
B
LEU
158
n
117
LEU
158
B
GLN
159
n
118
GLN
159
B
LYS
160
n
119
LYS
160
B
ILE
161
n
120
ILE
161
B
ASN
162
n
121
ASN
162
B
GLU
163
n
122
GLU
163
B
LEU
164
n
123
LEU
164
B
PRO
165
n
124
PRO
165
B
THR
166
n
125
THR
166
B
GLU
167
n
126
GLU
167
B
GLU
168
n
127
GLU
168
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
monomer
gel filtration
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
O
HOH
HOH
356
370
2.09
1
B
B
O
O
HOH
HOH
390
393
2.13
1
A
LEU
94
-118.49
76.58
100.180
20.6665
5.630
0.2068
0.1428
1.830
19.8530
1314
26257
5.0000
99.7500
0.1800
1
FREE R-VALUE
1.340
MOLECULAR REPLACEMENT
18.3600
0.9000
1.1100
4O74
1.830
19.8530
228
2533
18.04
24.05
181
0
2124
254
0.012
2310
1.321
3143
0.048
322
0.006
400
29.093
973
0.2311
0.0000
0.1369
1.9016
142
2682
2824
9
99.0000
0.2432
0.0000
0.1326
1.9881
143
2724
2867
9
99.0000
0.2422
0.0000
0.1378
2.0928
143
2727
2870
9
100.0000
0.2200
0.0000
0.1321
2.2238
144
2745
2889
9
100.0000
0.1953
0.0000
0.1309
2.3952
145
2748
2893
9
100.0000
0.2099
0.0000
0.1424
2.6358
146
2779
2925
9
100.0000
0.2014
0.0000
0.1549
3.0160
147
2787
2934
9
100.0000
0.2168
0.0000
0.1503
3.7955
148
2813
2961
9
100.0000
0.1732
0.0000
0.1448
19.8546
156
2938
3094
9
100.0000
14.910
1.830
20.000
5VBP
26316
0.083
0.045
0.095
0.997
1
7.100
4.400
99.900
0.343
1.830
1.860
0.906
0.185
0.391
0.696
1
4.300
99.900
0.290
1.860
1.900
0.931
0.156
0.330
0.685
1
4.300
99.800
0.257
1.900
1.930
0.940
0.138
0.293
0.712
1
4.300
98.900
0.230
1.930
1.970
0.951
0.123
0.262
0.748
1
4.300
99.800
0.203
1.970
2.010
0.970
0.109
0.231
0.732
1
4.300
100.000
0.178
2.010
2.060
0.972
0.095
0.202
0.816
1
4.400
100.000
0.155
2.060
2.110
0.977
0.083
0.177
0.769
1
4.300
100.000
0.130
2.110
2.170
0.984
0.069
0.148
0.813
1
4.400
99.800
0.122
2.170
2.230
0.987
0.065
0.139
0.805
1
4.400
99.900
0.112
2.230
2.310
0.987
0.060
0.127
0.866
1
4.400
100.000
0.106
2.310
2.390
0.989
0.057
0.120
0.854
1
4.400
100.000
0.101
2.390
2.480
0.989
0.053
0.114
0.881
1
4.500
99.900
0.093
2.480
2.600
0.991
0.049
0.106
0.899
1
4.500
100.000
0.081
2.600
2.730
0.991
0.043
0.092
0.883
1
4.500
100.000
0.080
2.730
2.900
0.993
0.042
0.090
1.114
1
4.500
100.000
0.077
2.900
3.130
0.993
0.041
0.088
1.410
1
4.400
99.900
0.077
3.130
3.440
0.992
0.042
0.088
1.978
1
4.400
99.900
0.061
3.440
3.930
0.994
0.033
0.069
1.743
1
4.400
99.900
0.047
3.930
4.940
0.997
0.025
0.053
1.320
1
4.300
99.900
0.039
4.940
20.000
0.998
0.022
0.045
1.103
1
4.100
99.800
data collection
SERGUI
data scaling
HKL-2000
refinement
PHENIX
1.8.4_1496
data extraction
PDB_EXTRACT
3.22
phasing
PHASER
data reduction
HKL
data scaling
HKL
N
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH RO3280
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
4
N
N
2
N
N
2
N
N
5
N
N
4
N
N
6
N
N
6
N
N
A
THR
60
A
THR
19
HELX_P
A
VAL
69
A
VAL
28
1
AA1
10
A
VAL
69
A
VAL
28
HELX_P
A
LYS
76
A
LYS
35
1
AA2
8
A
ALA
80
A
ALA
39
HELX_P
A
GLN
84
A
GLN
43
5
AA3
5
A
ASP
96
A
ASP
55
HELX_P
A
ILE
101
A
ILE
60
1
AA4
6
A
ASP
106
A
ASP
65
HELX_P
A
ASN
116
A
ASN
75
1
AA5
11
A
ASN
121
A
ASN
80
HELX_P
A
ASN
140
A
ASN
99
1
AA6
20
A
ASP
144
A
ASP
103
HELX_P
A
GLU
163
A
GLU
122
1
AA7
20
B
THR
60
B
THR
19
HELX_P
B
VAL
69
B
VAL
28
1
AA8
10
B
VAL
69
B
VAL
28
HELX_P
B
LYS
76
B
LYS
35
1
AA9
8
B
ALA
80
B
ALA
39
HELX_P
B
GLN
84
B
GLN
43
5
AB1
5
B
ASP
96
B
ASP
55
HELX_P
B
ILE
101
B
ILE
60
1
AB2
6
B
ASP
106
B
ASP
65
HELX_P
B
ASN
116
B
ASN
75
1
AB3
11
B
ASN
121
B
ASN
80
HELX_P
B
ASN
140
B
ASN
99
1
AB4
20
B
ASP
144
B
ASP
103
HELX_P
B
ASN
162
B
ASN
121
1
AB5
19
TRANSCRIPTION/INHIBITOR
BROMODOMAIN, CAP, HUNK1, MCAP, PROTEIN BINDING-INHIBITOR COMPLEX, MITOTIC CHROMOSOME ASSOCIATED PROTEIN, INHIBITOR, TRANSCRIPTION-INHIBITOR COMPLEX
BRD4_HUMAN
UNP
1
44
O60885
O60885-3
NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ
ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
44
168
5VBP
44
168
O60885
A
1
3
127
44
168
5VBP
44
168
O60885
B
1
3
127
1
expression tag
SER
42
5VBP
A
O60885
UNP
1
1
expression tag
MET
43
5VBP
A
O60885
UNP
2
2
expression tag
SER
42
5VBP
B
O60885
UNP
1
2
expression tag
MET
43
5VBP
B
O60885
UNP
2
binding site for residue EDO A 201
A
EDO
201
Software
5
binding site for residue PEG A 203
A
PEG
203
Software
2
binding site for residue 79C A 204
A
79C
204
Software
16
binding site for residue EDO B 201
B
EDO
201
Software
5
binding site for residue DMS B 203
B
DMS
203
Software
5
binding site for residue 79C B 204
B
79C
204
Software
14
A
ILE
100
A
ILE
59
5
1_555
A
ILE
101
A
ILE
60
5
1_555
A
LYS
102
A
LYS
61
5
1_555
A
THR
103
A
THR
62
5
1_555
A
ASN
135
A
ASN
94
5
1_555
A
TRP
81
A
TRP
40
2
1_555
A
79C
204
F
79C
2
1_555
A
TRP
81
A
TRP
40
16
1_555
A
PRO
82
A
PRO
41
16
1_555
A
PHE
83
A
PHE
42
16
1_555
A
VAL
87
A
VAL
46
16
1_555
A
LEU
92
A
LEU
51
16
1_555
A
LEU
94
A
LEU
53
16
1_555
A
TYR
97
A
TYR
56
16
1_555
A
TYR
139
A
TYR
98
16
1_555
A
ASN
140
A
ASN
99
16
1_555
A
PEG
203
E
PEG
16
1_555
A
HOH
303
K
HOH
16
1_555
A
HOH
310
K
HOH
16
1_555
A
HOH
374
K
HOH
16
1_555
A
HOH
376
K
HOH
16
1_555
B
ILE
146
B
ILE
105
16
1_555
B
79C
204
J
79C
16
1_555
B
ILE
100
B
ILE
59
5
1_555
B
ILE
101
B
ILE
60
5
1_555
B
LYS
102
B
LYS
61
5
1_555
B
THR
103
B
THR
62
5
1_555
B
ASN
135
B
ASN
94
5
1_555
B
ASP
144
B
ASP
103
5
1_555
B
ASP
145
B
ASP
104
5
1_555
B
HOH
374
L
HOH
5
1_555
B
HOH
383
L
HOH
5
1_555
B
HOH
412
L
HOH
5
1_555
A
79C
204
F
79C
14
1_555
B
TRP
81
B
TRP
40
14
1_555
B
PRO
82
B
PRO
41
14
1_555
B
PHE
83
B
PHE
42
14
1_555
B
VAL
87
B
VAL
46
14
1_555
B
LEU
92
B
LEU
51
14
1_555
B
LEU
94
B
LEU
53
14
1_555
B
TYR
97
B
TYR
56
14
1_555
B
TYR
139
B
TYR
98
14
1_555
B
ASN
140
B
ASN
99
14
1_555
B
HOH
309
L
HOH
14
1_555
B
HOH
345
L
HOH
14
1_555
B
HOH
379
L
HOH
14
1_555
B
HOH
385
L
HOH
14
1_555
19
P 21 21 21