0.019616
0.011325
0.000000
0.000000
0.022650
0.000000
0.000000
0.000000
0.008582
0.00000
0.00000
0.00000
0000-0002-9803-5310
Porter, N.J.
Christianson, D.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
3
90.00
90.00
120.00
50.980
50.980
116.517
C10 H19 N O5
233.262
(2S)-2-amino-8,8-dihydroxy-8-[(2S)-oxiran-2-yl]octanoic acid
L-peptide linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H11 N O2
129.157
6-CARBOXYPIPERIDINE
D-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C4 H8 O2
88.105
1,4-DIETHYLENE DIOXIDE
non-polymer
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
K 1
39.098
POTASSIUM ION
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
O
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
N
8
S
C
N
9
N
N
N
10
N
C
N
11
N
O
N
12
N
O
N
13
S
C
N
14
N
C
N
15
N
O
N
16
N
O
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
N
N
37
S
C
N
38
N
C
N
39
N
O
N
40
N
C
N
41
N
O
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
N
N
50
S
C
N
51
N
C
N
52
N
O
N
53
N
C
N
54
N
C
N
55
N
C
N
56
N
N
N
57
N
C
N
58
N
N
N
59
N
N
N
60
N
O
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
N
N
77
S
C
N
78
N
C
N
79
N
O
N
80
N
C
N
81
N
C
N
82
N
O
N
83
N
N
N
84
N
O
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
N
N
94
S
C
N
95
N
C
N
96
N
O
N
97
N
C
N
98
N
C
N
99
N
O
N
100
N
O
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
N
C
N
111
N
C
N
112
N
C
N
113
N
C
N
114
R
C
N
115
N
C
N
116
N
O
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
O
N
128
N
H
N
129
N
N
N
130
R
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
S
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
C
N
144
N
C
N
145
N
C
N
146
N
C
N
147
N
O
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
C
N
158
N
O
N
159
N
C
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
O
N
175
N
N
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
N
N
188
S
C
N
189
N
C
N
190
N
O
N
191
N
C
N
192
N
C
N
193
N
C
N
194
N
O
N
195
N
O
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
N
C
N
208
N
C
N
209
N
O
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
Y
221
N
C
Y
222
N
N
Y
223
N
C
Y
224
N
C
Y
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
S
C
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
K
N
263
N
N
N
264
S
C
N
265
N
C
N
266
N
O
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
N
N
294
N
O
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
C
N
316
N
S
N
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
N
N
331
S
C
N
332
N
C
N
333
N
O
N
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
N
358
N
C
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
N
375
N
O
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
R
C
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
N
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
N
439
N
O
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
N
N
453
S
C
N
454
N
C
N
455
N
O
N
456
N
C
N
457
N
C
N
458
N
C
N
459
N
O
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
doub
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
doub
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
doub
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
doub
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
doub
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
Y
218
N
sing
Y
219
N
doub
Y
220
N
doub
N
221
N
sing
Y
222
N
sing
N
223
N
sing
Y
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
doub
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
sing
Y
404
N
doub
N
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
Y
423
N
doub
Y
424
N
sing
Y
425
N
sing
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
doub
N
430
N
sing
Y
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
US
ACS Chem. Biol.
1554-8937
12
2281
2286
10.1021/acschembio.7b00330
28846375
Binding of the Microbial Cyclic Tetrapeptide Trapoxin A to the Class I Histone Deacetylase HDAC8.
2017
10.2210/pdb5vi6/pdb
pdb_00005vi6
100
1
PIXEL
2016-11-17
DECTRIS PILATUS3 6M
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
BL9-2
SSRL
0.979
SYNCHROTRON
SSRL BEAMLINE BL9-2
41161.777
Histone deacetylase 8
3.5.1.98
residues 8-377
1
man
polymer
638.751
Trapoxin A
1
syn
polymer
65.409
ZINC ION
1
syn
non-polymer
39.098
POTASSIUM ION
2
syn
non-polymer
62.068
1,2-ETHANEDIOL
10
syn
non-polymer
88.105
1,4-DIETHYLENE DIOXIDE
2
syn
non-polymer
18.015
water
377
nat
water
HD8
(3S,6S,9S,15aR)-6,9-dibenzyl-3-{6,6-dihydroxy-6-[(2S)-oxiran-2-yl]hexyl}octahydro-2H-pyrido[1,2-a][1,4,7,10]tetraazacyclododecine-1,4,7,10(3H,12H)-tetrone
no
no
SNADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE
GDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL
RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICE
SVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGK
TLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
SNADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE
GDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRL
RRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICE
SVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGK
TLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
A
polypeptide(L)
no
yes
FF(CPI)(5OM)
FFXX
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
372
HDAC8, HDACL1, CDA07
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
2.14
42.56
VAPOR DIFFUSION, SITTING DROP
8.0
35% dioxane
277
atom_site
atom_site_anisotrop
entity
entity_name_com
entity_poly
entity_poly_seq
pdbx_entity_src_syn
pdbx_molecule_features
pdbx_struct_assembly
pdbx_struct_assembly_gen
pdbx_struct_assembly_prop
pdbx_struct_conn_angle
pdbx_validate_close_contact
struct_conn
struct_conn_type
struct_keywords
struct_ref
struct_ref_seq
struct_site
struct_site_gen
citation
pdbx_audit_support
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_conn_type
atom_site
atom_site_anisotrop
chem_comp_atom
chem_comp_bond
struct_conn
repository
Initial release
Advisory
Atomic model
Database references
Derived calculations
Non-polymer description
Polymer sequence
Source and taxonomy
Structure summary
Author supporting evidence
Database references
Author supporting evidence
Data collection
Database references
Derived calculations
Refinement description
Atomic model
Data collection
Derived calculations
1
0
2017-09-06
2
0
2017-09-13
2
1
2017-09-27
2
2
2020-01-01
2
3
2023-10-04
3
0
2023-11-15
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.group_PDB
_atom_site.label_alt_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.occupancy
_atom_site.type_symbol
_atom_site_anisotrop.U[1][1]
_atom_site_anisotrop.U[1][2]
_atom_site_anisotrop.U[1][3]
_atom_site_anisotrop.U[2][2]
_atom_site_anisotrop.U[2][3]
_atom_site_anisotrop.U[3][3]
_atom_site_anisotrop.id
_atom_site_anisotrop.pdbx_auth_asym_id
_atom_site_anisotrop.pdbx_auth_atom_id
_atom_site_anisotrop.pdbx_auth_comp_id
_atom_site_anisotrop.pdbx_auth_seq_id
_atom_site_anisotrop.pdbx_label_asym_id
_atom_site_anisotrop.pdbx_label_atom_id
_atom_site_anisotrop.pdbx_label_comp_id
_atom_site_anisotrop.pdbx_label_seq_id
_atom_site_anisotrop.type_symbol
_chem_comp.formula
_chem_comp.id
_chem_comp.name
_chem_comp.pdbx_synonyms
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_fragment
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_prop.value
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.auth_seq_id_2
_struct_keywords.pdbx_keywords
_struct_keywords.text
_citation.journal_volume
_citation.page_first
_citation.page_last
_pdbx_audit_support.funding_organization
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn_type.id
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.label_atom_id
_atom_site_anisotrop.pdbx_auth_atom_id
_atom_site_anisotrop.pdbx_label_atom_id
_chem_comp_atom.atom_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_struct_conn.ptnr2_label_atom_id
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM49758
N
RCSB
Y
RCSB
2017-04-14
REL
REL
ZN
ZINC ION
K
POTASSIUM ION
EDO
1,2-ETHANEDIOL
DIO
1,4-DIETHYLENE DIOXIDE
HOH
water
314151
ascomycetes
Helicoma ambiens
sample
1
4
3EWF
PDB
experimental model
Inhibitor
Trapoxin A
Cyclic peptide
ZN
1
3
ZN
ZN
401
A
K
1
4
K
K
402
A
K
2
4
K
K
403
A
EDO
1
5
EDO
EDO
404
A
EDO
3
5
EDO
EDO
405
A
EDO
4
5
EDO
EDO
406
A
EDO
10
5
EDO
EDO
407
A
EDO
16
5
EDO
EDO
408
A
EDO
19
5
EDO
EDO
409
A
EDO
20
5
EDO
EDO
410
A
EDO
21
5
EDO
EDO
411
A
EDO
23
5
EDO
EDO
412
A
EDO
24
5
EDO
EDO
413
A
DIO
2
6
DIO
DIO
414
A
DIO
3
6
DIO
DIO
415
A
HOH
373
7
HOH
HOH
501
A
HOH
424
7
HOH
HOH
502
A
HOH
244
7
HOH
HOH
503
A
HOH
345
7
HOH
HOH
504
A
HOH
425
7
HOH
HOH
505
A
HOH
124
7
HOH
HOH
506
A
HOH
186
7
HOH
HOH
507
A
HOH
410
7
HOH
HOH
508
A
HOH
435
7
HOH
HOH
509
A
HOH
231
7
HOH
HOH
510
A
HOH
429
7
HOH
HOH
511
A
HOH
277
7
HOH
HOH
512
A
HOH
444
7
HOH
HOH
513
A
HOH
255
7
HOH
HOH
514
A
HOH
220
7
HOH
HOH
515
A
HOH
300
7
HOH
HOH
516
A
HOH
98
7
HOH
HOH
517
A
HOH
229
7
HOH
HOH
518
A
HOH
69
7
HOH
HOH
519
A
HOH
348
7
HOH
HOH
520
A
HOH
87
7
HOH
HOH
521
A
HOH
86
7
HOH
HOH
522
A
HOH
407
7
HOH
HOH
523
A
HOH
219
7
HOH
HOH
524
A
HOH
357
7
HOH
HOH
525
A
HOH
404
7
HOH
HOH
526
A
HOH
439
7
HOH
HOH
527
A
HOH
44
7
HOH
HOH
528
A
HOH
198
7
HOH
HOH
529
A
HOH
230
7
HOH
HOH
530
A
HOH
58
7
HOH
HOH
531
A
HOH
145
7
HOH
HOH
532
A
HOH
241
7
HOH
HOH
533
A
HOH
449
7
HOH
HOH
534
A
HOH
451
7
HOH
HOH
535
A
HOH
411
7
HOH
HOH
536
A
HOH
82
7
HOH
HOH
537
A
HOH
260
7
HOH
HOH
538
A
HOH
139
7
HOH
HOH
539
A
HOH
72
7
HOH
HOH
540
A
HOH
12
7
HOH
HOH
541
A
HOH
294
7
HOH
HOH
542
A
HOH
64
7
HOH
HOH
543
A
HOH
157
7
HOH
HOH
544
A
HOH
147
7
HOH
HOH
545
A
HOH
153
7
HOH
HOH
546
A
HOH
168
7
HOH
HOH
547
A
HOH
392
7
HOH
HOH
548
A
HOH
324
7
HOH
HOH
549
A
HOH
403
7
HOH
HOH
550
A
HOH
350
7
HOH
HOH
551
A
HOH
149
7
HOH
HOH
552
A
HOH
3
7
HOH
HOH
553
A
HOH
284
7
HOH
HOH
554
A
HOH
116
7
HOH
HOH
555
A
HOH
450
7
HOH
HOH
556
A
HOH
240
7
HOH
HOH
557
A
HOH
144
7
HOH
HOH
558
A
HOH
93
7
HOH
HOH
559
A
HOH
91
7
HOH
HOH
560
A
HOH
25
7
HOH
HOH
561
A
HOH
245
7
HOH
HOH
562
A
HOH
399
7
HOH
HOH
563
A
HOH
267
7
HOH
HOH
564
A
HOH
222
7
HOH
HOH
565
A
HOH
266
7
HOH
HOH
566
A
HOH
31
7
HOH
HOH
567
A
HOH
151
7
HOH
HOH
568
A
HOH
77
7
HOH
HOH
569
A
HOH
137
7
HOH
HOH
570
A
HOH
108
7
HOH
HOH
571
A
HOH
143
7
HOH
HOH
572
A
HOH
380
7
HOH
HOH
573
A
HOH
328
7
HOH
HOH
574
A
HOH
334
7
HOH
HOH
575
A
HOH
42
7
HOH
HOH
576
A
HOH
165
7
HOH
HOH
577
A
HOH
46
7
HOH
HOH
578
A
HOH
173
7
HOH
HOH
579
A
HOH
188
7
HOH
HOH
580
A
HOH
22
7
HOH
HOH
581
A
HOH
95
7
HOH
HOH
582
A
HOH
317
7
HOH
HOH
583
A
HOH
16
7
HOH
HOH
584
A
HOH
117
7
HOH
HOH
585
A
HOH
239
7
HOH
HOH
586
A
HOH
101
7
HOH
HOH
587
A
HOH
246
7
HOH
HOH
588
A
HOH
257
7
HOH
HOH
589
A
HOH
13
7
HOH
HOH
590
A
HOH
97
7
HOH
HOH
591
A
HOH
374
7
HOH
HOH
592
A
HOH
243
7
HOH
HOH
593
A
HOH
33
7
HOH
HOH
594
A
HOH
251
7
HOH
HOH
595
A
HOH
347
7
HOH
HOH
596
A
HOH
419
7
HOH
HOH
597
A
HOH
20
7
HOH
HOH
598
A
HOH
106
7
HOH
HOH
599
A
HOH
293
7
HOH
HOH
600
A
HOH
214
7
HOH
HOH
601
A
HOH
1
7
HOH
HOH
602
A
HOH
346
7
HOH
HOH
603
A
HOH
174
7
HOH
HOH
604
A
HOH
367
7
HOH
HOH
605
A
HOH
382
7
HOH
HOH
606
A
HOH
4
7
HOH
HOH
607
A
HOH
204
7
HOH
HOH
608
A
HOH
100
7
HOH
HOH
609
A
HOH
102
7
HOH
HOH
610
A
HOH
114
7
HOH
HOH
611
A
HOH
314
7
HOH
HOH
612
A
HOH
315
7
HOH
HOH
613
A
HOH
177
7
HOH
HOH
614
A
HOH
332
7
HOH
HOH
615
A
HOH
166
7
HOH
HOH
616
A
HOH
18
7
HOH
HOH
617
A
HOH
146
7
HOH
HOH
618
A
HOH
6
7
HOH
HOH
619
A
HOH
128
7
HOH
HOH
620
A
HOH
11
7
HOH
HOH
621
A
HOH
63
7
HOH
HOH
622
A
HOH
115
7
HOH
HOH
623
A
HOH
158
7
HOH
HOH
624
A
HOH
24
7
HOH
HOH
625
A
HOH
29
7
HOH
HOH
626
A
HOH
190
7
HOH
HOH
627
A
HOH
133
7
HOH
HOH
628
A
HOH
109
7
HOH
HOH
629
A
HOH
272
7
HOH
HOH
630
A
HOH
59
7
HOH
HOH
631
A
HOH
232
7
HOH
HOH
632
A
HOH
75
7
HOH
HOH
633
A
HOH
216
7
HOH
HOH
634
A
HOH
43
7
HOH
HOH
635
A
HOH
17
7
HOH
HOH
636
A
HOH
427
7
HOH
HOH
637
A
HOH
103
7
HOH
HOH
638
A
HOH
141
7
HOH
HOH
639
A
HOH
47
7
HOH
HOH
640
A
HOH
191
7
HOH
HOH
641
A
HOH
213
7
HOH
HOH
642
A
HOH
135
7
HOH
HOH
643
A
HOH
132
7
HOH
HOH
644
A
HOH
8
7
HOH
HOH
645
A
HOH
221
7
HOH
HOH
646
A
HOH
61
7
HOH
HOH
647
A
HOH
207
7
HOH
HOH
648
A
HOH
437
7
HOH
HOH
649
A
HOH
10
7
HOH
HOH
650
A
HOH
74
7
HOH
HOH
651
A
HOH
194
7
HOH
HOH
652
A
HOH
56
7
HOH
HOH
653
A
HOH
172
7
HOH
HOH
654
A
HOH
45
7
HOH
HOH
655
A
HOH
406
7
HOH
HOH
656
A
HOH
14
7
HOH
HOH
657
A
HOH
65
7
HOH
HOH
658
A
HOH
23
7
HOH
HOH
659
A
HOH
2
7
HOH
HOH
660
A
HOH
164
7
HOH
HOH
661
A
HOH
5
7
HOH
HOH
662
A
HOH
160
7
HOH
HOH
663
A
HOH
397
7
HOH
HOH
664
A
HOH
81
7
HOH
HOH
665
A
HOH
111
7
HOH
HOH
666
A
HOH
32
7
HOH
HOH
667
A
HOH
67
7
HOH
HOH
668
A
HOH
242
7
HOH
HOH
669
A
HOH
296
7
HOH
HOH
670
A
HOH
428
7
HOH
HOH
671
A
HOH
52
7
HOH
HOH
672
A
HOH
162
7
HOH
HOH
673
A
HOH
203
7
HOH
HOH
674
A
HOH
197
7
HOH
HOH
675
A
HOH
39
7
HOH
HOH
676
A
HOH
250
7
HOH
HOH
677
A
HOH
452
7
HOH
HOH
678
A
HOH
21
7
HOH
HOH
679
A
HOH
48
7
HOH
HOH
680
A
HOH
248
7
HOH
HOH
681
A
HOH
259
7
HOH
HOH
682
A
HOH
110
7
HOH
HOH
683
A
HOH
258
7
HOH
HOH
684
A
HOH
96
7
HOH
HOH
685
A
HOH
38
7
HOH
HOH
686
A
HOH
112
7
HOH
HOH
687
A
HOH
150
7
HOH
HOH
688
A
HOH
261
7
HOH
HOH
689
A
HOH
389
7
HOH
HOH
690
A
HOH
89
7
HOH
HOH
691
A
HOH
285
7
HOH
HOH
692
A
HOH
131
7
HOH
HOH
693
A
HOH
426
7
HOH
HOH
694
A
HOH
126
7
HOH
HOH
695
A
HOH
379
7
HOH
HOH
696
A
HOH
394
7
HOH
HOH
697
A
HOH
340
7
HOH
HOH
698
A
HOH
423
7
HOH
HOH
699
A
HOH
446
7
HOH
HOH
700
A
HOH
152
7
HOH
HOH
701
A
HOH
71
7
HOH
HOH
702
A
HOH
416
7
HOH
HOH
703
A
HOH
387
7
HOH
HOH
704
A
HOH
431
7
HOH
HOH
705
A
HOH
225
7
HOH
HOH
706
A
HOH
122
7
HOH
HOH
707
A
HOH
352
7
HOH
HOH
708
A
HOH
40
7
HOH
HOH
709
A
HOH
412
7
HOH
HOH
710
A
HOH
76
7
HOH
HOH
711
A
HOH
54
7
HOH
HOH
712
A
HOH
113
7
HOH
HOH
713
A
HOH
35
7
HOH
HOH
714
A
HOH
104
7
HOH
HOH
715
A
HOH
79
7
HOH
HOH
716
A
HOH
159
7
HOH
HOH
717
A
HOH
273
7
HOH
HOH
718
A
HOH
156
7
HOH
HOH
719
A
HOH
83
7
HOH
HOH
720
A
HOH
70
7
HOH
HOH
721
A
HOH
30
7
HOH
HOH
722
A
HOH
295
7
HOH
HOH
723
A
HOH
388
7
HOH
HOH
724
A
HOH
9
7
HOH
HOH
725
A
HOH
161
7
HOH
HOH
726
A
HOH
105
7
HOH
HOH
727
A
HOH
218
7
HOH
HOH
728
A
HOH
92
7
HOH
HOH
729
A
HOH
19
7
HOH
HOH
730
A
HOH
41
7
HOH
HOH
731
A
HOH
57
7
HOH
HOH
732
A
HOH
134
7
HOH
HOH
733
A
HOH
330
7
HOH
HOH
734
A
HOH
189
7
HOH
HOH
735
A
HOH
121
7
HOH
HOH
736
A
HOH
99
7
HOH
HOH
737
A
HOH
274
7
HOH
HOH
738
A
HOH
454
7
HOH
HOH
739
A
HOH
51
7
HOH
HOH
740
A
HOH
34
7
HOH
HOH
741
A
HOH
55
7
HOH
HOH
742
A
HOH
224
7
HOH
HOH
743
A
HOH
26
7
HOH
HOH
744
A
HOH
53
7
HOH
HOH
745
A
HOH
118
7
HOH
HOH
746
A
HOH
15
7
HOH
HOH
747
A
HOH
171
7
HOH
HOH
748
A
HOH
127
7
HOH
HOH
749
A
HOH
27
7
HOH
HOH
750
A
HOH
80
7
HOH
HOH
751
A
HOH
319
7
HOH
HOH
752
A
HOH
184
7
HOH
HOH
753
A
HOH
414
7
HOH
HOH
754
A
HOH
85
7
HOH
HOH
755
A
HOH
307
7
HOH
HOH
756
A
HOH
136
7
HOH
HOH
757
A
HOH
37
7
HOH
HOH
758
A
HOH
148
7
HOH
HOH
759
A
HOH
178
7
HOH
HOH
760
A
HOH
28
7
HOH
HOH
761
A
HOH
7
7
HOH
HOH
762
A
HOH
322
7
HOH
HOH
763
A
HOH
125
7
HOH
HOH
764
A
HOH
247
7
HOH
HOH
765
A
HOH
155
7
HOH
HOH
766
A
HOH
49
7
HOH
HOH
767
A
HOH
73
7
HOH
HOH
768
A
HOH
88
7
HOH
HOH
769
A
HOH
299
7
HOH
HOH
770
A
HOH
205
7
HOH
HOH
771
A
HOH
342
7
HOH
HOH
772
A
HOH
175
7
HOH
HOH
773
A
HOH
400
7
HOH
HOH
774
A
HOH
252
7
HOH
HOH
775
A
HOH
408
7
HOH
HOH
776
A
HOH
417
7
HOH
HOH
777
A
HOH
430
7
HOH
HOH
778
A
HOH
343
7
HOH
HOH
779
A
HOH
385
7
HOH
HOH
780
A
HOH
398
7
HOH
HOH
781
A
HOH
298
7
HOH
HOH
782
A
HOH
393
7
HOH
HOH
783
A
HOH
321
7
HOH
HOH
784
A
HOH
154
7
HOH
HOH
785
A
HOH
441
7
HOH
HOH
786
A
HOH
265
7
HOH
HOH
787
A
HOH
140
7
HOH
HOH
788
A
HOH
234
7
HOH
HOH
789
A
HOH
326
7
HOH
HOH
790
A
HOH
237
7
HOH
HOH
791
A
HOH
249
7
HOH
HOH
792
A
HOH
304
7
HOH
HOH
793
A
HOH
381
7
HOH
HOH
794
A
HOH
362
7
HOH
HOH
795
A
HOH
361
7
HOH
HOH
796
A
HOH
442
7
HOH
HOH
797
A
HOH
217
7
HOH
HOH
798
A
HOH
327
7
HOH
HOH
799
A
HOH
413
7
HOH
HOH
800
A
HOH
306
7
HOH
HOH
801
A
HOH
262
7
HOH
HOH
802
A
HOH
120
7
HOH
HOH
803
A
HOH
308
7
HOH
HOH
804
A
HOH
448
7
HOH
HOH
805
A
HOH
344
7
HOH
HOH
806
A
HOH
402
7
HOH
HOH
807
A
HOH
432
7
HOH
HOH
808
A
HOH
409
7
HOH
HOH
809
A
HOH
401
7
HOH
HOH
810
A
HOH
384
7
HOH
HOH
811
A
HOH
278
7
HOH
HOH
812
A
HOH
365
7
HOH
HOH
813
A
HOH
66
7
HOH
HOH
814
A
HOH
210
7
HOH
HOH
815
A
HOH
235
7
HOH
HOH
816
A
HOH
377
7
HOH
HOH
817
A
HOH
167
7
HOH
HOH
818
A
HOH
292
7
HOH
HOH
819
A
HOH
206
7
HOH
HOH
820
A
HOH
181
7
HOH
HOH
821
A
HOH
333
7
HOH
HOH
822
A
HOH
320
7
HOH
HOH
823
A
HOH
202
7
HOH
HOH
824
A
HOH
193
7
HOH
HOH
825
A
HOH
434
7
HOH
HOH
826
A
HOH
176
7
HOH
HOH
827
A
HOH
196
7
HOH
HOH
828
A
HOH
192
7
HOH
HOH
829
A
HOH
436
7
HOH
HOH
830
A
HOH
303
7
HOH
HOH
831
A
HOH
369
7
HOH
HOH
832
A
HOH
302
7
HOH
HOH
833
A
HOH
396
7
HOH
HOH
834
A
HOH
269
7
HOH
HOH
835
A
HOH
286
7
HOH
HOH
836
A
HOH
301
7
HOH
HOH
837
A
HOH
438
7
HOH
HOH
838
A
HOH
415
7
HOH
HOH
839
A
HOH
200
7
HOH
HOH
840
A
HOH
123
7
HOH
HOH
841
A
HOH
283
7
HOH
HOH
842
A
HOH
422
7
HOH
HOH
843
A
HOH
256
7
HOH
HOH
844
A
HOH
287
7
HOH
HOH
845
A
HOH
351
7
HOH
HOH
846
A
HOH
309
7
HOH
HOH
847
A
HOH
78
7
HOH
HOH
848
A
HOH
440
7
HOH
HOH
849
A
HOH
264
7
HOH
HOH
850
A
HOH
318
7
HOH
HOH
851
A
HOH
337
7
HOH
HOH
852
A
HOH
223
7
HOH
HOH
853
A
HOH
163
7
HOH
HOH
854
A
HOH
443
7
HOH
HOH
855
A
HOH
455
7
HOH
HOH
856
A
HOH
228
7
HOH
HOH
857
A
HOH
405
7
HOH
HOH
858
A
HOH
180
7
HOH
HOH
859
A
HOH
445
7
HOH
HOH
860
A
HOH
331
7
HOH
HOH
861
A
HOH
281
7
HOH
HOH
862
A
HOH
282
7
HOH
HOH
863
A
HOH
288
7
HOH
HOH
864
A
HOH
185
7
HOH
HOH
865
A
HOH
376
7
HOH
HOH
866
A
HOH
263
7
HOH
HOH
867
A
HOH
447
7
HOH
HOH
868
A
HOH
349
7
HOH
HOH
869
A
HOH
323
7
HOH
HOH
870
A
HOH
433
7
HOH
HOH
871
A
HOH
227
7
HOH
HOH
872
A
HOH
291
7
HOH
HOH
873
A
HOH
366
7
HOH
HOH
874
A
HOH
383
7
HOH
HOH
101
B
HOH
316
7
HOH
HOH
102
B
HOH
453
7
HOH
HOH
103
B
n
1
6
A
n
2
7
A
n
3
8
A
n
4
9
A
n
5
10
A
n
6
11
A
n
7
12
A
n
8
13
A
LEU
14
n
9
LEU
14
A
VAL
15
n
10
VAL
15
A
PRO
16
n
11
PRO
16
A
VAL
17
n
12
VAL
17
A
TYR
18
n
13
TYR
18
A
ILE
19
n
14
ILE
19
A
TYR
20
n
15
TYR
20
A
SER
21
n
16
SER
21
A
PRO
22
n
17
PRO
22
A
GLU
23
n
18
GLU
23
A
TYR
24
n
19
TYR
24
A
VAL
25
n
20
VAL
25
A
SER
26
n
21
SER
26
A
MET
27
n
22
MET
27
A
CYS
28
n
23
CYS
28
A
ASP
29
n
24
ASP
29
A
SER
30
n
25
SER
30
A
LEU
31
n
26
LEU
31
A
ALA
32
n
27
ALA
32
A
LYS
33
n
28
LYS
33
A
ILE
34
n
29
ILE
34
A
PRO
35
n
30
PRO
35
A
LYS
36
n
31
LYS
36
A
ARG
37
n
32
ARG
37
A
ALA
38
n
33
ALA
38
A
SER
39
n
34
SER
39
A
MET
40
n
35
MET
40
A
VAL
41
n
36
VAL
41
A
HIS
42
n
37
HIS
42
A
SER
43
n
38
SER
43
A
LEU
44
n
39
LEU
44
A
ILE
45
n
40
ILE
45
A
GLU
46
n
41
GLU
46
A
ALA
47
n
42
ALA
47
A
TYR
48
n
43
TYR
48
A
ALA
49
n
44
ALA
49
A
LEU
50
n
45
LEU
50
A
HIS
51
n
46
HIS
51
A
LYS
52
n
47
LYS
52
A
GLN
53
n
48
GLN
53
A
MET
54
n
49
MET
54
A
ARG
55
n
50
ARG
55
A
ILE
56
n
51
ILE
56
A
VAL
57
n
52
VAL
57
A
LYS
58
n
53
LYS
58
A
PRO
59
n
54
PRO
59
A
LYS
60
n
55
LYS
60
A
VAL
61
n
56
VAL
61
A
ALA
62
n
57
ALA
62
A
SER
63
n
58
SER
63
A
MET
64
n
59
MET
64
A
GLU
65
n
60
GLU
65
A
GLU
66
n
61
GLU
66
A
MET
67
n
62
MET
67
A
ALA
68
n
63
ALA
68
A
THR
69
n
64
THR
69
A
PHE
70
n
65
PHE
70
A
HIS
71
n
66
HIS
71
A
THR
72
n
67
THR
72
A
ASP
73
n
68
ASP
73
A
ALA
74
n
69
ALA
74
A
TYR
75
n
70
TYR
75
A
LEU
76
n
71
LEU
76
A
GLN
77
n
72
GLN
77
A
HIS
78
n
73
HIS
78
A
LEU
79
n
74
LEU
79
A
GLN
80
n
75
GLN
80
A
LYS
81
n
76
LYS
81
A
VAL
82
n
77
VAL
82
A
SER
83
n
78
SER
83
A
GLN
84
n
79
GLN
84
A
GLU
85
n
80
GLU
85
A
GLY
86
n
81
GLY
86
A
n
82
87
A
n
83
88
A
n
84
89
A
n
85
90
A
n
86
91
A
n
87
92
A
n
88
93
A
n
89
94
A
GLU
95
n
90
GLU
95
A
TYR
96
n
91
TYR
96
A
GLY
97
n
92
GLY
97
A
LEU
98
n
93
LEU
98
A
GLY
99
n
94
GLY
99
A
TYR
100
n
95
TYR
100
A
ASP
101
n
96
ASP
101
A
CYS
102
n
97
CYS
102
A
PRO
103
n
98
PRO
103
A
ALA
104
n
99
ALA
104
A
THR
105
n
100
THR
105
A
GLU
106
n
101
GLU
106
A
GLY
107
n
102
GLY
107
A
ILE
108
n
103
ILE
108
A
PHE
109
n
104
PHE
109
A
ASP
110
n
105
ASP
110
A
TYR
111
n
106
TYR
111
A
ALA
112
n
107
ALA
112
A
ALA
113
n
108
ALA
113
A
ALA
114
n
109
ALA
114
A
ILE
115
n
110
ILE
115
A
GLY
116
n
111
GLY
116
A
GLY
117
n
112
GLY
117
A
ALA
118
n
113
ALA
118
A
THR
119
n
114
THR
119
A
ILE
120
n
115
ILE
120
A
THR
121
n
116
THR
121
A
ALA
122
n
117
ALA
122
A
ALA
123
n
118
ALA
123
A
GLN
124
n
119
GLN
124
A
CYS
125
n
120
CYS
125
A
LEU
126
n
121
LEU
126
A
ILE
127
n
122
ILE
127
A
ASP
128
n
123
ASP
128
A
GLY
129
n
124
GLY
129
A
MET
130
n
125
MET
130
A
CYS
131
n
126
CYS
131
A
LYS
132
n
127
LYS
132
A
VAL
133
n
128
VAL
133
A
ALA
134
n
129
ALA
134
A
ILE
135
n
130
ILE
135
A
ASN
136
n
131
ASN
136
A
TRP
137
n
132
TRP
137
A
SER
138
n
133
SER
138
A
GLY
139
n
134
GLY
139
A
GLY
140
n
135
GLY
140
A
TRP
141
n
136
TRP
141
A
HIS
142
n
137
HIS
142
A
HIS
143
n
138
HIS
143
A
ALA
144
n
139
ALA
144
A
LYS
145
n
140
LYS
145
A
LYS
146
n
141
LYS
146
A
ASP
147
n
142
ASP
147
A
GLU
148
n
143
GLU
148
A
ALA
149
n
144
ALA
149
A
SER
150
n
145
SER
150
A
GLY
151
n
146
GLY
151
A
PHE
152
n
147
PHE
152
A
CYS
153
n
148
CYS
153
A
TYR
154
n
149
TYR
154
A
LEU
155
n
150
LEU
155
A
ASN
156
n
151
ASN
156
A
ASP
157
n
152
ASP
157
A
ALA
158
n
153
ALA
158
A
VAL
159
n
154
VAL
159
A
LEU
160
n
155
LEU
160
A
GLY
161
n
156
GLY
161
A
ILE
162
n
157
ILE
162
A
LEU
163
n
158
LEU
163
A
ARG
164
n
159
ARG
164
A
LEU
165
n
160
LEU
165
A
ARG
166
n
161
ARG
166
A
ARG
167
n
162
ARG
167
A
LYS
168
n
163
LYS
168
A
PHE
169
n
164
PHE
169
A
GLU
170
n
165
GLU
170
A
ARG
171
n
166
ARG
171
A
ILE
172
n
167
ILE
172
A
LEU
173
n
168
LEU
173
A
TYR
174
n
169
TYR
174
A
VAL
175
n
170
VAL
175
A
ASP
176
n
171
ASP
176
A
LEU
177
n
172
LEU
177
A
ASP
178
n
173
ASP
178
A
LEU
179
n
174
LEU
179
A
HIS
180
n
175
HIS
180
A
HIS
181
n
176
HIS
181
A
GLY
182
n
177
GLY
182
A
ASP
183
n
178
ASP
183
A
GLY
184
n
179
GLY
184
A
VAL
185
n
180
VAL
185
A
GLU
186
n
181
GLU
186
A
ASP
187
n
182
ASP
187
A
ALA
188
n
183
ALA
188
A
PHE
189
n
184
PHE
189
A
SER
190
n
185
SER
190
A
PHE
191
n
186
PHE
191
A
THR
192
n
187
THR
192
A
SER
193
n
188
SER
193
A
LYS
194
n
189
LYS
194
A
VAL
195
n
190
VAL
195
A
MET
196
n
191
MET
196
A
THR
197
n
192
THR
197
A
VAL
198
n
193
VAL
198
A
SER
199
n
194
SER
199
A
LEU
200
n
195
LEU
200
A
HIS
201
n
196
HIS
201
A
LYS
202
n
197
LYS
202
A
PHE
203
n
198
PHE
203
A
SER
204
n
199
SER
204
A
PRO
205
n
200
PRO
205
A
GLY
206
n
201
GLY
206
A
PHE
207
n
202
PHE
207
A
PHE
208
n
203
PHE
208
A
PRO
209
n
204
PRO
209
A
GLY
210
n
205
GLY
210
A
THR
211
n
206
THR
211
A
GLY
212
n
207
GLY
212
A
ASP
213
n
208
ASP
213
A
VAL
214
n
209
VAL
214
A
SER
215
n
210
SER
215
A
ASP
216
n
211
ASP
216
A
VAL
217
n
212
VAL
217
A
GLY
218
n
213
GLY
218
A
LEU
219
n
214
LEU
219
A
GLY
220
n
215
GLY
220
A
LYS
221
n
216
LYS
221
A
GLY
222
n
217
GLY
222
A
ARG
223
n
218
ARG
223
A
TYR
224
n
219
TYR
224
A
TYR
225
n
220
TYR
225
A
SER
226
n
221
SER
226
A
VAL
227
n
222
VAL
227
A
ASN
228
n
223
ASN
228
A
VAL
229
n
224
VAL
229
A
PRO
230
n
225
PRO
230
A
ILE
231
n
226
ILE
231
A
GLN
232
n
227
GLN
232
A
ASP
233
n
228
ASP
233
A
GLY
234
n
229
GLY
234
A
ILE
235
n
230
ILE
235
A
GLN
236
n
231
GLN
236
A
ASP
237
n
232
ASP
237
A
GLU
238
n
233
GLU
238
A
LYS
239
n
234
LYS
239
A
TYR
240
n
235
TYR
240
A
TYR
241
n
236
TYR
241
A
GLN
242
n
237
GLN
242
A
ILE
243
n
238
ILE
243
A
CYS
244
n
239
CYS
244
A
GLU
245
n
240
GLU
245
A
SER
246
n
241
SER
246
A
VAL
247
n
242
VAL
247
A
LEU
248
n
243
LEU
248
A
LYS
249
n
244
LYS
249
A
GLU
250
n
245
GLU
250
A
VAL
251
n
246
VAL
251
A
TYR
252
n
247
TYR
252
A
GLN
253
n
248
GLN
253
A
ALA
254
n
249
ALA
254
A
PHE
255
n
250
PHE
255
A
ASN
256
n
251
ASN
256
A
PRO
257
n
252
PRO
257
A
LYS
258
n
253
LYS
258
A
ALA
259
n
254
ALA
259
A
VAL
260
n
255
VAL
260
A
VAL
261
n
256
VAL
261
A
LEU
262
n
257
LEU
262
A
GLN
263
n
258
GLN
263
A
LEU
264
n
259
LEU
264
A
GLY
265
n
260
GLY
265
A
ALA
266
n
261
ALA
266
A
ASP
267
n
262
ASP
267
A
THR
268
n
263
THR
268
A
ILE
269
n
264
ILE
269
A
ALA
270
n
265
ALA
270
A
GLY
271
n
266
GLY
271
A
ASP
272
n
267
ASP
272
A
PRO
273
n
268
PRO
273
A
MET
274
n
269
MET
274
A
CYS
275
n
270
CYS
275
A
SER
276
n
271
SER
276
A
PHE
277
n
272
PHE
277
A
ASN
278
n
273
ASN
278
A
MET
279
n
274
MET
279
A
THR
280
n
275
THR
280
A
PRO
281
n
276
PRO
281
A
VAL
282
n
277
VAL
282
A
GLY
283
n
278
GLY
283
A
ILE
284
n
279
ILE
284
A
GLY
285
n
280
GLY
285
A
LYS
286
n
281
LYS
286
A
CYS
287
n
282
CYS
287
A
LEU
288
n
283
LEU
288
A
LYS
289
n
284
LYS
289
A
TYR
290
n
285
TYR
290
A
ILE
291
n
286
ILE
291
A
LEU
292
n
287
LEU
292
A
GLN
293
n
288
GLN
293
A
TRP
294
n
289
TRP
294
A
GLN
295
n
290
GLN
295
A
LEU
296
n
291
LEU
296
A
ALA
297
n
292
ALA
297
A
THR
298
n
293
THR
298
A
LEU
299
n
294
LEU
299
A
ILE
300
n
295
ILE
300
A
LEU
301
n
296
LEU
301
A
GLY
302
n
297
GLY
302
A
GLY
303
n
298
GLY
303
A
GLY
304
n
299
GLY
304
A
GLY
305
n
300
GLY
305
A
TYR
306
n
301
TYR
306
A
ASN
307
n
302
ASN
307
A
LEU
308
n
303
LEU
308
A
ALA
309
n
304
ALA
309
A
ASN
310
n
305
ASN
310
A
THR
311
n
306
THR
311
A
ALA
312
n
307
ALA
312
A
ARG
313
n
308
ARG
313
A
CYS
314
n
309
CYS
314
A
TRP
315
n
310
TRP
315
A
THR
316
n
311
THR
316
A
TYR
317
n
312
TYR
317
A
LEU
318
n
313
LEU
318
A
THR
319
n
314
THR
319
A
GLY
320
n
315
GLY
320
A
VAL
321
n
316
VAL
321
A
ILE
322
n
317
ILE
322
A
LEU
323
n
318
LEU
323
A
GLY
324
n
319
GLY
324
A
LYS
325
n
320
LYS
325
A
THR
326
n
321
THR
326
A
LEU
327
n
322
LEU
327
A
SER
328
n
323
SER
328
A
SER
329
n
324
SER
329
A
GLU
330
n
325
GLU
330
A
ILE
331
n
326
ILE
331
A
PRO
332
n
327
PRO
332
A
ASP
333
n
328
ASP
333
A
HIS
334
n
329
HIS
334
A
GLU
335
n
330
GLU
335
A
PHE
336
n
331
PHE
336
A
PHE
337
n
332
PHE
337
A
THR
338
n
333
THR
338
A
ALA
339
n
334
ALA
339
A
TYR
340
n
335
TYR
340
A
GLY
341
n
336
GLY
341
A
PRO
342
n
337
PRO
342
A
ASP
343
n
338
ASP
343
A
TYR
344
n
339
TYR
344
A
VAL
345
n
340
VAL
345
A
LEU
346
n
341
LEU
346
A
GLU
347
n
342
GLU
347
A
ILE
348
n
343
ILE
348
A
THR
349
n
344
THR
349
A
PRO
350
n
345
PRO
350
A
SER
351
n
346
SER
351
A
CYS
352
n
347
CYS
352
A
ARG
353
n
348
ARG
353
A
PRO
354
n
349
PRO
354
A
ASP
355
n
350
ASP
355
A
ARG
356
n
351
ARG
356
A
ASN
357
n
352
ASN
357
A
GLU
358
n
353
GLU
358
A
PRO
359
n
354
PRO
359
A
HIS
360
n
355
HIS
360
A
ARG
361
n
356
ARG
361
A
ILE
362
n
357
ILE
362
A
GLN
363
n
358
GLN
363
A
GLN
364
n
359
GLN
364
A
ILE
365
n
360
ILE
365
A
LEU
366
n
361
LEU
366
A
ASN
367
n
362
ASN
367
A
TYR
368
n
363
TYR
368
A
ILE
369
n
364
ILE
369
A
LYS
370
n
365
LYS
370
A
GLY
371
n
366
GLY
371
A
ASN
372
n
367
ASN
372
A
LEU
373
n
368
LEU
373
A
LYS
374
n
369
LYS
374
A
n
370
375
A
n
371
376
A
n
372
377
A
TXG
1
n
1
PHE
1
B
TXG
1
n
2
PHE
2
B
TXG
1
n
3
CPI
3
B
TXG
1
n
4
5OM
4
B
author_and_software_defined_assembly
PISA
2
dimeric
mass spectrometry
3610
-13
14100
A
ASP
176
A
O
ASP
171
1_555
A
K
402
D
K
K
1_555
A
ASP
176
A
OD1
ASP
171
1_555
73.0
A
ASP
176
A
O
ASP
171
1_555
A
K
402
D
K
K
1_555
A
ASP
178
A
O
ASP
173
1_555
107.9
A
ASP
176
A
OD1
ASP
171
1_555
A
K
402
D
K
K
1_555
A
ASP
178
A
O
ASP
173
1_555
104.3
A
ASP
176
A
O
ASP
171
1_555
A
K
402
D
K
K
1_555
A
HIS
180
A
O
HIS
175
1_555
160.5
A
ASP
176
A
OD1
ASP
171
1_555
A
K
402
D
K
K
1_555
A
HIS
180
A
O
HIS
175
1_555
88.6
A
ASP
178
A
O
ASP
173
1_555
A
K
402
D
K
K
1_555
A
HIS
180
A
O
HIS
175
1_555
82.3
A
ASP
176
A
O
ASP
171
1_555
A
K
402
D
K
K
1_555
A
SER
199
A
OG
SER
194
1_555
85.2
A
ASP
176
A
OD1
ASP
171
1_555
A
K
402
D
K
K
1_555
A
SER
199
A
OG
SER
194
1_555
101.9
A
ASP
178
A
O
ASP
173
1_555
A
K
402
D
K
K
1_555
A
SER
199
A
OG
SER
194
1_555
153.1
A
HIS
180
A
O
HIS
175
1_555
A
K
402
D
K
K
1_555
A
SER
199
A
OG
SER
194
1_555
92.8
A
ASP
176
A
O
ASP
171
1_555
A
K
402
D
K
K
1_555
A
LEU
200
A
O
LEU
195
1_555
78.6
A
ASP
176
A
OD1
ASP
171
1_555
A
K
402
D
K
K
1_555
A
LEU
200
A
O
LEU
195
1_555
147.4
A
ASP
178
A
O
ASP
173
1_555
A
K
402
D
K
K
1_555
A
LEU
200
A
O
LEU
195
1_555
69.5
A
HIS
180
A
O
HIS
175
1_555
A
K
402
D
K
K
1_555
A
LEU
200
A
O
LEU
195
1_555
120.8
A
SER
199
A
OG
SER
194
1_555
A
K
402
D
K
K
1_555
A
LEU
200
A
O
LEU
195
1_555
91.1
A
ASP
178
A
OD2
ASP
173
1_555
A
ZN
401
C
ZN
ZN
1_555
A
HIS
180
A
ND1
HIS
175
1_555
105.2
A
ASP
178
A
OD2
ASP
173
1_555
A
ZN
401
C
ZN
ZN
1_555
A
ASP
267
A
OD2
ASP
262
1_555
112.1
A
HIS
180
A
ND1
HIS
175
1_555
A
ZN
401
C
ZN
ZN
1_555
A
ASP
267
A
OD2
ASP
262
1_555
97.9
A
ASP
178
A
OD2
ASP
173
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O01
5OM
4
1_555
125.6
A
HIS
180
A
ND1
HIS
175
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O01
5OM
4
1_555
113.3
A
ASP
267
A
OD2
ASP
262
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O01
5OM
4
1_555
99.4
A
ASP
178
A
OD2
ASP
173
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O02
5OM
4
1_555
86.5
A
HIS
180
A
ND1
HIS
175
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O02
5OM
4
1_555
87.2
A
ASP
267
A
OD2
ASP
262
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O02
5OM
4
1_555
158.3
B
5OM
4
B
O01
5OM
4
1_555
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O02
5OM
4
1_555
59.6
A
PHE
189
A
O
PHE
184
1_555
A
K
403
E
K
K
1_555
A
THR
192
A
O
THR
187
1_555
78.7
A
PHE
189
A
O
PHE
184
1_555
A
K
403
E
K
K
1_555
A
VAL
195
A
O
VAL
190
1_555
114.7
A
THR
192
A
O
THR
187
1_555
A
K
403
E
K
K
1_555
A
VAL
195
A
O
VAL
190
1_555
82.3
A
PHE
189
A
O
PHE
184
1_555
A
K
403
E
K
K
1_555
A
TYR
225
A
O
TYR
220
1_555
156.3
A
THR
192
A
O
THR
187
1_555
A
K
403
E
K
K
1_555
A
TYR
225
A
O
TYR
220
1_555
121.0
A
VAL
195
A
O
VAL
190
1_555
A
K
403
E
K
K
1_555
A
TYR
225
A
O
TYR
220
1_555
83.1
A
PHE
189
A
O
PHE
184
1_555
A
K
403
E
K
K
1_555
A
HOH
590
R
O
HOH
1_555
90.0
A
THR
192
A
O
THR
187
1_555
A
K
403
E
K
K
1_555
A
HOH
590
R
O
HOH
1_555
97.0
A
VAL
195
A
O
VAL
190
1_555
A
K
403
E
K
K
1_555
A
HOH
590
R
O
HOH
1_555
154.4
A
TYR
225
A
O
TYR
220
1_555
A
K
403
E
K
K
1_555
A
HOH
590
R
O
HOH
1_555
75.3
A
PHE
189
A
O
PHE
184
1_555
A
K
403
E
K
K
1_555
A
HOH
730
R
O
HOH
1_555
72.8
A
THR
192
A
O
THR
187
1_555
A
K
403
E
K
K
1_555
A
HOH
730
R
O
HOH
1_555
151.4
A
VAL
195
A
O
VAL
190
1_555
A
K
403
E
K
K
1_555
A
HOH
730
R
O
HOH
1_555
111.9
A
TYR
225
A
O
TYR
220
1_555
A
K
403
E
K
K
1_555
A
HOH
730
R
O
HOH
1_555
86.3
A
HOH
590
R
O
HOH
1_555
A
K
403
E
K
K
1_555
A
HOH
730
R
O
HOH
1_555
80.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
55
A
O
ARG
50
A
N
TYR
18
A
N
TYR
13
A
N
ILE
19
A
N
ILE
14
A
O
ILE
135
A
O
ILE
130
A
N
ASN
136
A
N
ASN
131
A
O
ILE
300
A
O
ILE
295
A
O
LEU
299
A
O
LEU
294
A
N
LEU
262
A
N
LEU
257
A
O
GLN
263
A
O
GLN
258
A
N
VAL
175
A
N
VAL
170
A
N
TYR
174
A
N
TYR
169
A
O
MET
196
A
O
MET
191
A
N
THR
197
A
N
THR
192
A
O
VAL
227
A
O
VAL
222
1
A
CG
LEU
14
A
CG
LEU
9
1
Y
1
A
CD1
LEU
14
A
CD1
LEU
9
1
Y
1
A
CD2
LEU
14
A
CD2
LEU
9
1
Y
1
A
CG1
VAL
15
A
CG1
VAL
10
1
Y
1
A
CG2
VAL
15
A
CG2
VAL
10
1
Y
1
A
CD
LYS
58
A
CD
LYS
53
1
Y
1
A
CE
LYS
58
A
CE
LYS
53
1
Y
1
A
NZ
LYS
58
A
NZ
LYS
53
1
Y
1
A
CG
LYS
60
A
CG
LYS
55
1
Y
1
A
CD
LYS
60
A
CD
LYS
55
1
Y
1
A
CE
LYS
60
A
CE
LYS
55
1
Y
1
A
NZ
LYS
60
A
NZ
LYS
55
1
Y
1
A
CD
GLU
106
A
CD
GLU
101
1
Y
1
A
OE1
GLU
106
A
OE1
GLU
101
1
Y
1
A
OE2
GLU
106
A
OE2
GLU
101
1
Y
1
A
SER
6
A
SER
1
1
Y
1
A
ASN
7
A
ASN
2
1
Y
1
A
ALA
8
A
ALA
3
1
Y
1
A
ASP
9
A
ASP
4
1
Y
1
A
SER
10
A
SER
5
1
Y
1
A
GLY
11
A
GLY
6
1
Y
1
A
GLN
12
A
GLN
7
1
Y
1
A
SER
13
A
SER
8
1
Y
1
A
ASP
87
A
ASP
82
1
Y
1
A
ASP
88
A
ASP
83
1
Y
1
A
ASP
89
A
ASP
84
1
Y
1
A
HIS
90
A
HIS
85
1
Y
1
A
PRO
91
A
PRO
86
1
Y
1
A
ASP
92
A
ASP
87
1
Y
1
A
SER
93
A
SER
88
1
Y
1
A
ILE
94
A
ILE
89
1
Y
1
A
HIS
375
A
HIS
370
1
Y
1
A
VAL
376
A
VAL
371
1
Y
1
A
VAL
377
A
VAL
372
1
Y
1
A
A
HH
HD1
TYR
HIS
18
42
1.14
1
A
A
HD21
O
ASN
HOH
136
512
1.56
1
A
A
HZ1
O
LYS
HOH
36
509
1.56
1
A
A
O2
O
EDO
HOH
412
502
2.02
1
A
A
O
O
HOH
HOH
656
806
2.16
1
A
ILE
34
-142.77
52.86
1
A
TYR
100
-104.17
-96.34
1
A
GLU
148
B
-164.00
118.05
1
A
PHE
152
75.86
-1.51
1
A
TYR
224
81.77
2.23
1
A
SER
276
-121.47
-73.23
1
A
SER
276
-122.56
-73.23
0.1433
0.1213
0.1224
1.237
41.286
4939
95812
5.15
99.05
0.10
1
FREE R-VALUE
1.98
MOLECULAR REPLACEMENT
13.23
0.90
1.11
3EWF
1.237
41.286
377
3215
100
0
2738
0.009
3099
1.033
4215
22.330
1130
0.081
451
0.008
550
0.2474
0.2223
1.2510
162
3048
100.00
0.2606
0.2118
1.2658
136
3045
100.00
0.2507
0.1940
1.2812
170
3123
100.00
0.2250
0.1883
1.2974
196
3008
100.00
0.1940
0.1802
1.3145
160
3046
100.00
0.2028
0.1631
1.3325
202
2947
99.00
0.1820
0.1597
1.3515
155
2937
95.00
0.1854
0.1498
1.3717
159
3027
98.00
0.1799
0.1395
1.3932
178
3031
100.00
0.1925
0.1355
1.4160
182
3082
100.00
0.1671
0.1315
1.4404
164
3001
100.00
0.1505
0.1212
1.4666
150
3063
100.00
0.1434
0.1075
1.4948
176
3052
99.00
0.1249
0.1004
1.5253
170
2993
99.00
0.1258
0.0999
1.5585
122
3013
97.00
0.1524
0.1018
1.5948
176
2886
94.00
0.1335
0.0984
1.6346
170
3058
100.00
0.1272
0.0942
1.6788
179
3026
100.00
0.1192
0.0951
1.7282
142
3074
100.00
0.1372
0.0968
1.7840
150
3095
100.00
0.1369
0.1032
1.8478
140
3060
100.00
0.1170
0.1024
1.9218
150
3034
99.00
0.1174
0.1073
2.0092
197
2902
96.00
0.1398
0.1066
2.1152
140
3114
100.00
0.1373
0.1107
2.2477
202
2985
100.00
0.1267
0.1077
2.4212
160
3074
100.00
0.1386
0.1164
2.6648
160
3055
100.00
0.1442
0.1245
3.0503
158
2990
98.00
0.1249
0.1260
3.8426
155
3082
100.00
0.1444
0.1341
41.3085
178
3022
100.00
1.237
44.15
5VI6
95873
0.999
0.046
0.035
1
13.7
4.8
99.1
1
refinement
PHENIX
(1.10.1_2155)
data reduction
iMOSFLM
data scaling
Aimless
phasing
PHASER
N
Crystal structure of histone deacetylase 8 in complex with trapoxin A
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
6
N
N
6
N
N
7
N
N
7
N
N
A
SER
21
A
SER
16
HELX_P
A
ASP
29
A
ASP
24
1
AA1
9
A
LYS
36
A
LYS
31
HELX_P
A
TYR
48
A
TYR
43
1
AA2
13
A
ALA
49
A
ALA
44
HELX_P
A
MET
54
A
MET
49
5
AA3
6
A
SER
63
A
SER
58
HELX_P
A
ALA
68
A
ALA
63
1
AA4
6
A
THR
72
A
THR
67
HELX_P
A
GLU
85
A
GLU
80
1
AA5
14
A
GLY
107
A
GLY
102
HELX_P
A
ASP
128
A
ASP
123
1
AA6
22
A
ASN
156
A
ASN
151
HELX_P
A
ARG
166
A
ARG
161
1
AA7
11
A
GLY
182
A
GLY
177
HELX_P
A
PHE
189
A
PHE
184
1
AA8
8
A
LEU
219
A
LEU
214
HELX_P
A
ARG
223
A
ARG
218
5
AA9
5
A
GLN
236
A
GLN
231
HELX_P
A
ASN
256
A
ASN
251
1
AB1
21
A
GLY
265
A
GLY
260
HELX_P
A
ILE
269
A
ILE
264
5
AB2
5
A
THR
280
A
THR
275
HELX_P
A
GLN
293
A
GLN
288
1
AB3
14
A
ASN
307
A
ASN
302
HELX_P
A
GLY
324
A
GLY
319
1
AB4
18
A
PHE
336
A
PHE
331
HELX_P
A
GLY
341
A
GLY
336
5
AB5
6
A
GLU
358
A
GLU
353
HELX_P
A
LEU
373
A
LEU
368
1
AB6
16
covale
1.368
both
B
PHE
1
B
N
PHE
1
1_555
B
5OM
4
B
C
5OM
4
1_555
covale
1.410
both
B
PHE
2
B
C
PHE
2
1_555
B
CPI
3
B
N
CPI
3
1_555
covale
1.372
both
B
CPI
3
B
C
CPI
3
1_555
B
5OM
4
B
N
5OM
4
1_555
metalc
2.780
A
ASP
176
A
O
ASP
171
1_555
A
K
402
D
K
K
1_555
metalc
2.676
A
ASP
176
A
OD1
ASP
171
1_555
A
K
402
D
K
K
1_555
metalc
1.963
A
ASP
178
A
OD2
ASP
173
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.680
A
ASP
178
A
O
ASP
173
1_555
A
K
402
D
K
K
1_555
metalc
2.067
A
HIS
180
A
ND1
HIS
175
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
2.759
A
HIS
180
A
O
HIS
175
1_555
A
K
402
D
K
K
1_555
metalc
2.614
A
PHE
189
A
O
PHE
184
1_555
A
K
403
E
K
K
1_555
metalc
2.848
A
THR
192
A
O
THR
187
1_555
A
K
403
E
K
K
1_555
metalc
2.593
A
VAL
195
A
O
VAL
190
1_555
A
K
403
E
K
K
1_555
metalc
2.881
A
SER
199
A
OG
SER
194
1_555
A
K
402
D
K
K
1_555
metalc
2.654
A
LEU
200
A
O
LEU
195
1_555
A
K
402
D
K
K
1_555
metalc
2.990
A
TYR
225
A
O
TYR
220
1_555
A
K
403
E
K
K
1_555
metalc
1.966
A
ASP
267
A
OD2
ASP
262
1_555
A
ZN
401
C
ZN
ZN
1_555
metalc
1.925
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O01
5OM
4
1_555
metalc
2.487
A
ZN
401
C
ZN
ZN
1_555
B
5OM
4
B
O02
5OM
4
1_555
metalc
2.750
A
K
403
E
K
K
1_555
A
HOH
590
R
O
HOH
1_555
metalc
2.780
A
K
403
E
K
K
1_555
A
HOH
730
R
O
HOH
1_555
HYDROLASE/HYDROLASE INHIBITOR
HDAC, epigenetics, natural product inhibitor, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR complex
A
PHE
208
A
PHE
203
1
A
PRO
209
A
PRO
204
-1.25
A
GLY
341
A
GLY
336
1
A
PRO
342
A
PRO
337
4.06
B
PHE
2
B
PHE
2
1
B
CPI
3
B
CPI
3
5.87
HDAC8_HUMAN
UNP
1
8
Q9BY41
ADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGD
DDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRR
KFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESV
LKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTL
SSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
5VI6
PDB
2
1
5VI6
8
377
5VI6
8
377
Q9BY41
A
1
3
372
1
4
5VI6
1
4
5VI6
B
2
1
4
1
expression tag
SER
6
5VI6
A
Q9BY41
UNP
1
1
expression tag
ASN
7
5VI6
A
Q9BY41
UNP
2
8
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
ARG
55
A
ARG
50
A
VAL
57
A
VAL
52
A
VAL
17
A
VAL
12
A
ILE
19
A
ILE
14
A
VAL
133
A
VAL
128
A
ASN
136
A
ASN
131
A
ALA
297
A
ALA
292
A
LEU
301
A
LEU
296
A
ALA
259
A
ALA
254
A
GLN
263
A
GLN
258
A
ILE
172
A
ILE
167
A
ASP
176
A
ASP
171
A
VAL
195
A
VAL
190
A
LYS
202
A
LYS
197
A
SER
226
A
SER
221
A
ILE
231
A
ILE
226
binding site for residue ZN A 401
A
ZN
401
Software
4
binding site for residue K A 402
A
K
402
Software
5
binding site for residue K A 403
A
K
403
Software
6
binding site for residue EDO A 404
A
EDO
404
Software
5
binding site for residue EDO A 405
A
EDO
405
Software
3
binding site for residue EDO A 406
A
EDO
406
Software
5
binding site for residue EDO A 407
A
EDO
407
Software
1
binding site for residue EDO A 408
A
EDO
408
Software
9
binding site for residue EDO A 409
A
EDO
409
Software
5
binding site for residue EDO A 410
A
EDO
410
Software
8
binding site for residue EDO A 411
A
EDO
411
Software
6
binding site for residue EDO A 412
A
EDO
412
Software
9
binding site for residue EDO A 413
A
EDO
413
Software
3
binding site for residue DIO A 414
A
DIO
414
Software
6
binding site for residue DIO A 415
A
DIO
415
Software
4
A
ASP
178
A
ASP
173
4
1_555
A
HIS
180
A
HIS
175
4
1_555
A
ASP
267
A
ASP
262
4
1_555
B
5OM
4
B
5OM
4
4
1_555
A
ASP
176
A
ASP
171
5
1_555
A
ASP
178
A
ASP
173
5
1_555
A
HIS
180
A
HIS
175
5
1_555
A
SER
199
A
SER
194
5
1_555
A
LEU
200
A
LEU
195
5
1_555
A
PHE
189
A
PHE
184
6
1_555
A
THR
192
A
THR
187
6
1_555
A
VAL
195
A
VAL
190
6
1_555
A
TYR
225
A
TYR
220
6
1_555
A
HOH
590
R
HOH
6
1_555
A
HOH
730
R
HOH
6
1_555
A
SER
63
A
SER
58
5
1_555
A
MET
64
A
MET
59
5
1_555
A
ASP
355
A
ASP
350
5
1_655
A
HOH
616
R
HOH
5
1_555
A
HOH
686
R
HOH
5
1_555
A
ARG
166
A
ARG
161
3
1_555
A
ARG
167
A
ARG
162
3
1_555
A
GLU
170
A
GLU
165
3
1_555
A
GLU
23
A
GLU
18
5
1_555
A
TYR
24
A
TYR
19
5
1_555
A
ALA
114
A
ALA
109
5
1_555
A
HOH
601
R
HOH
5
1_555
A
HOH
631
R
HOH
5
1_555
A
MET
274
A
MET
269
1
1_555
A
PRO
281
A
PRO
276
9
1_555
A
VAL
282
A
VAL
277
9
1_555
A
ARG
313
A
ARG
308
9
1_555
A
TYR
317
A
TYR
312
9
1_555
A
LEU
346
A
LEU
341
9
1_555
A
GLU
347
A
GLU
342
9
1_555
A
ILE
348
A
ILE
343
9
1_555
A
HOH
531
R
HOH
9
1_555
A
HOH
604
R
HOH
9
1_555
A
GLY
206
A
GLY
201
5
1_555
A
PHE
207
A
PHE
202
5
1_555
A
PHE
208
A
PHE
203
5
1_555
A
PRO
209
A
PRO
204
5
1_555
A
GLY
210
A
GLY
205
5
1_555
A
HIS
143
A
HIS
138
8
1_555
A
LYS
145
A
LYS
140
8
1_555
A
SER
150
A
SER
145
8
1_555
A
ASP
183
A
ASP
178
8
1_555
A
PHE
208
A
PHE
203
8
1_555
A
PRO
209
A
PRO
204
8
1_555
A
HOH
548
R
HOH
8
1_555
A
HOH
632
R
HOH
8
1_555
A
TYR
111
A
TYR
106
6
1_555
A
TRP
141
A
TRP
136
6
1_555
A
PHE
152
A
PHE
147
6
1_555
A
CYS
153
A
CYS
148
6
1_555
A
TYR
154
A
TYR
149
6
1_555
A
LEU
155
A
LEU
150
6
1_555
A
CYS
28
A
CYS
23
9
1_555
A
ILE
34
A
ILE
29
9
1_555
A
ARG
37
A
ARG
32
9
1_555
A
ALA
38
A
ALA
33
9
1_555
A
SER
138
A
SER
133
9
1_555
A
HOH
502
R
HOH
9
1_555
A
HOH
505
R
HOH
9
1_555
A
HOH
519
R
HOH
9
1_555
A
HOH
657
R
HOH
9
1_555
A
ARG
361
A
ARG
356
3
1_555
A
GLN
364
A
GLN
359
3
1_555
A
TYR
368
A
TYR
363
3
1_555
A
TYR
224
A
TYR
219
6
1_555
A
TYR
225
A
TYR
220
6
1_555
A
ALA
254
A
ALA
249
6
1_555
A
ASN
372
A
ASN
367
6
1_555
A
LEU
373
A
LEU
368
6
1_555
A
HOH
681
R
HOH
6
1_555
A
THR
69
A
THR
64
4
1_555
A
LEU
163
A
LEU
158
4
1_555
A
ALA
188
A
ALA
183
4
1_555
A
PHE
189
A
PHE
184
4
1_555
145
P 32