0.016704 0.000000 0.000000 0.000000 0.014527 0.000000 0.000000 0.000000 0.009087 0.00000 0.00000 0.00000 Moon, A.F. Pryor, J.M. Ramsden, D.A. Kunkel, T.A. Bebenek, K. Pedersen, L.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 59.866 68.838 110.044 C9 H16 N3 O14 P3 483.156 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C2 H6 O2 62.068 1,2-ETHANEDIOL ETHYLENE GLYCOL non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N N N 5 N O N 6 N P N 7 N O N 8 N O N 9 N O N 10 N P N 11 N O N 12 N O N 13 N O N 14 N C N 15 R C N 16 N O N 17 R C N 18 R C N 19 N O N 20 S C N 21 N O N 22 N N N 23 N C N 24 N C N 25 N O N 26 N N N 27 N C N 28 N O N 29 N C N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N N N 47 S C N 48 N C N 49 N O N 50 N C N 51 N O N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N N N 60 S C N 61 N C N 62 N O N 63 N C N 64 N C N 65 N C N 66 N N N 67 N C N 68 N N N 69 N N N 70 N O N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N N N 87 S C N 88 N C N 89 N O N 90 N C N 91 N C N 92 N O N 93 N N N 94 N O N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N N N 104 S C N 105 N C N 106 N O N 107 N C N 108 N C N 109 N O N 110 N O N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N N N 120 R C N 121 N C N 122 N O N 123 N C N 124 N S N 125 N O N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N O N 134 N P N 135 N O N 136 N O N 137 N O N 138 N C N 139 R C N 140 N O N 141 S C N 142 N O N 143 N C N 144 R C Y 145 N N Y 146 N C Y 147 N N Y 148 N C Y 149 N C N 150 N N Y 151 N N Y 152 N C Y 153 N N Y 154 N C N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N O N 170 N P N 171 N O N 172 N O N 173 N O N 174 N C N 175 R C N 176 N O N 177 S C N 178 N O N 179 N C N 180 R C N 181 N N N 182 N C N 183 N O N 184 N N N 185 N C N 186 N N N 187 N C N 188 N C N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N O N 204 N P N 205 N O N 206 N O N 207 N O N 208 N C N 209 R C N 210 N O N 211 S C N 212 N O N 213 N C N 214 R C Y 215 N N Y 216 N C Y 217 N N Y 218 N C N 219 N C N 220 N O N 221 N N N 222 N C N 223 N N N 224 N N Y 225 N C N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N O N 241 N P N 242 N O N 243 N O N 244 N O N 245 N C N 246 R C N 247 N O N 248 S C N 249 N O N 250 N C N 251 R C N 252 N N N 253 N C N 254 N O N 255 N N N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N C N 277 N O N 278 N C N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N N N 287 S C N 288 N C N 289 N O N 290 N C N 291 N C N 292 N C N 293 N O N 294 N N N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N N N 307 S C N 308 N C N 309 N O N 310 N C N 311 N C N 312 N C N 313 N O N 314 N O N 315 N O N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N N N 326 N C N 327 N C N 328 N O N 329 N O N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N N Y 342 N C Y 343 N C Y 344 N N N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N O N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 S C N 364 N C N 365 N C N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N N N 382 S C N 383 N C N 384 N O N 385 N C N 386 N C N 387 N C N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N N N 404 S C N 405 N C N 406 N O N 407 N C N 408 N C N 409 N C N 410 N C N 411 N N N 412 N O N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N N N 429 S C N 430 N C N 431 N O N 432 N C N 433 N C N 434 N S N 435 N C N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N MG N 449 N NA N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C Y 455 N C Y 456 N C Y 457 N C Y 458 N C Y 459 N C Y 460 N C N 461 N O N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N N N 474 S C N 475 N C N 476 N O N 477 N C N 478 N C N 479 N C N 480 N O N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N N N 491 S C N 492 N C N 493 N O N 494 N C N 495 N O N 496 N O N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N N N 505 S C N 506 N C N 507 N O N 508 R C N 509 N O N 510 N C N 511 N O N 512 N H N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N N N 522 S C N 523 N C N 524 N O N 525 N C Y 526 N C Y 527 N C Y 528 N C Y 529 N N Y 530 N C Y 531 N C Y 532 N C Y 533 N C Y 534 N C N 535 N O N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 545 N H N 546 N H N 547 N H N 548 N N N 549 S C N 550 N C N 551 N O N 552 N C Y 553 N C Y 554 N C Y 555 N C Y 556 N C Y 557 N C Y 558 N C N 559 N O N 560 N O N 561 N H N 562 N H N 563 N H N 564 N H N 565 N H N 566 N H N 567 N H N 568 N H N 569 N H N 570 N H N 571 N H N 572 N N N 573 S C N 574 N C N 575 N O N 576 N C N 577 N C N 578 N C N 579 N O N 580 N H N 581 N H N 582 N H N 583 N H N 584 N H N 585 N H N 586 N H N 587 N H N 588 N H N 589 N H N 590 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N doub N 17 N sing N 18 N doub N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N doub N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N doub N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N doub N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing Y 152 N sing Y 153 N sing Y 154 N doub N 155 N sing Y 156 N sing Y 157 N sing Y 158 N doub N 159 N sing Y 160 N doub N 161 N sing N 162 N sing Y 163 N sing Y 164 N doub N 165 N sing Y 166 N sing N 167 N sing N 168 N sing N 169 N doub N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing Y 225 N sing Y 226 N sing Y 227 N doub N 228 N sing Y 229 N sing N 230 N sing Y 231 N doub N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N doub N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing Y 344 N sing Y 345 N doub Y 346 N doub N 347 N sing Y 348 N sing N 349 N sing Y 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N doub N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N doub N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N doub N 448 N sing N 449 N sing N 450 N sing N 451 N sing Y 452 N doub Y 453 N sing Y 454 N sing N 455 N sing Y 456 N doub N 457 N sing Y 458 N doub N 459 N sing Y 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N doub N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N doub N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N doub N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N doub N 517 N sing N 518 N sing N 519 N sing N 520 N sing Y 521 N doub Y 522 N sing Y 523 N sing N 524 N sing Y 525 N doub Y 526 N sing Y 527 N sing N 528 N sing Y 529 N sing Y 530 N doub N 531 N sing Y 532 N doub N 533 N sing Y 534 N sing N 535 N sing N 536 N sing N 537 N sing N 538 N sing N 539 N sing N 540 N sing N 541 N sing N 542 N sing N 543 N sing N 544 N doub N 545 N sing N 546 N sing N 547 N sing N 548 N sing Y 549 N doub Y 550 N sing Y 551 N sing N 552 N sing Y 553 N doub N 554 N sing Y 555 N doub N 556 N sing Y 557 N sing N 558 N sing N 559 N sing N 560 N sing N 561 N sing N 562 N sing N 563 N sing N 564 N sing N 565 N sing N 566 N sing N 567 N sing N 568 N doub N 569 N sing N 570 N sing N 571 N sing N 572 N sing N 573 N sing N 574 N sing N 575 N sing N 576 N sing N 577 N sing N 578 N sing N 579 N sing UK Nucleic Acids Res. NARHAD 0389 1362-4962 45 9138 9148 10.1093/nar/gkx527 28911097 Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu. 2017 10.2210/pdb5vza/pdb pdb_00005vza 100 1 Rosenbaum-Rock vertical focusing mirror CCD 2017-04-13 MARMOSAIC 300 mm CCD Rosenbaum-Rock monochromator high-resolution double-crystal Si(220) sagittal focusing SINGLE WAVELENGTH M x-ray 1 1.0 1.0 22-ID APS 1.0 SYNCHROTRON APS BEAMLINE 22-ID 39874.188 DNA-directed DNA/RNA polymerase mu 2.7.7.7 residues 134-494 G433S 1 man polymer 2740.812 DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3') 1 syn polymer 1190.830 DNA (5'-D(*CP*GP*TP*A)-3') 1 syn polymer 1191.818 DNA (5'-D(P*GP*CP*CP*G)-3') 1 syn polymer 483.156 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine 1 syn non-polymer 24.305 MAGNESIUM ION 2 syn non-polymer 22.990 SODIUM ION 1 syn non-polymer 62.068 1,2-ETHANEDIOL 2 syn non-polymer 18.015 water 415 nat water Pol Mu,Terminal transferase no no GSAAASPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEH SSRVVQELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLST PVLRSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHS CCESPTRLAQQSHMDAFERSFCIFRLPQPGSWKAVRVDLVVAPVSQFPFALLSWTGSKLFQRELRRFSRKEKGLWLNSHG LFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA GSAAASPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEH SSRVVQELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLST PVLRSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHS CCESPTRLAQQSHMDAFERSFCIFRLPQPGSWKAVRVDLVVAPVSQFPFALLSWTGSKLFQRELRRFSRKEKGLWLNSHG LFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA A polypeptide(L) no no (DC)(DG)(DG)(DC)(DA)(DT)(DA)(DC)(DG) CGGCATACG T polydeoxyribonucleotide no no (DC)(DG)(DT)(DA) CGTA P polydeoxyribonucleotide no no (DG)(DC)(DC)(DG) GCCG D polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 354 POLM, polmu 9606 Homo sapiens 562 Escherichia coli plasmid Biological sequence pGEXM 1 2.52 51.18 VAPOR DIFFUSION, SITTING DROP 7.5 90mM HEPES pH 7.5, 18% PEG4K 293 -10.759 1 19 T 1 D 4 -2.539 T_DC1:DG4_D 1 -13.372 0.193 0.421 -0.124 0.409 1 19 T 2 D 3 -0.040 T_DG2:DC3_D 2 -12.985 0.062 0.209 0.006 -0.291 1 19 T 3 D 2 -2.202 T_DG3:DC2_D 3 -7.913 -0.206 0.139 -0.154 14.369 1 19 T 4 D 1 -1.067 T_DC4:DG1_D 4 1.961 0.234 -0.302 -0.084 0.355 1 20 T 6 P 4 6.305 T_DT6:DA4_P 5 -0.511 0.338 -0.070 -0.173 13.965 1 20 T 7 P 3 3.630 T_DA7:DT3_P 6 -4.515 0.197 0.228 -0.190 14.281 1 19 T 8 P 2 0.405 T_DC8:DG2_P 7 -14.544 0.249 -0.079 -0.144 -1.668 1 19 T 9 P 1 -0.157 T_DG9:DC1_P 8 -10.328 -0.165 0.059 -0.130 3.153 33.733 T T 1 2 13.826 D D 4 3 3.163 7.949 -0.535 0.435 TT_DC1DG2:DC3DG4_DD 1 1.455 -2.531 32.778 -0.515 1.154 3.386 34.453 T T 2 3 4.424 D D 3 2 3.434 2.617 0.605 -0.158 TT_DG2DG3:DC2DC3_DD 2 -1.428 2.413 34.328 -0.692 -1.254 3.019 26.683 T T 3 4 5.936 D D 2 1 3.011 2.719 0.366 0.083 TT_DG3DC4:DG1DC2_DD 3 5.099 -11.133 26.061 -0.481 0.447 2.765 29.566 T T 6 7 16.543 P P 4 3 3.118 8.327 0.228 -0.768 TT_DT6DA7:DT3DA4_PP 4 -1.863 3.702 28.334 -3.128 -0.810 3.445 34.494 T T 7 8 -1.188 P P 3 2 3.416 -0.704 -0.652 -0.872 TT_DA7DC8:DG2DT3_PP 5 -0.737 1.243 34.479 -1.356 0.979 3.304 38.403 T T 8 9 12.862 P P 2 1 3.566 8.375 -0.700 -1.147 TT_DC8DG9:DC1DG2_PP 6 -4.980 7.648 37.192 -2.859 0.401 pdbx_audit_support citation pdbx_audit_support chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle struct_conn repository Initial release Author supporting evidence Database references Author supporting evidence Data collection Database references Derived calculations Refinement description 1 0 2017-07-05 1 1 2017-09-20 1 2 2017-09-27 1 3 2019-12-04 1 4 2023-10-04 _pdbx_audit_support.funding_organization _citation.journal_volume _citation.page_first _citation.page_last _citation.pdbx_database_id_PubMed _citation.title _pdbx_audit_support.funding_organization _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id United States National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS) 1ZIA ES 102645 United States National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS) Z01 ES065070 United States American Cancer Society PF-14-0438-01-DMC United States National Institutes of Health/National Cancer Institute (NIH/NCI) CA097096 N RCSB Y RCSB 2017-05-27 REL REL 1 A O HOH 1137 5.90 1 T O HOH 145 5.99 2KH 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine MG MAGNESIUM ION NA SODIUM ION EDO 1,2-ETHANEDIOL HOH water 32630 synthetic construct sample 1 9 32630 synthetic construct sample 1 4 32630 synthetic construct sample 1 4 4M04 PDB experimental model ZUN 701 5 2KH 2KH 701 A MG 1 6 MG MG 702 A MG 2 6 MG MG 703 A NA 3 7 NA NA 704 A EDO 2 8 EDO EDO 705 A EDO 3 8 EDO EDO 706 A HOH 123 9 HOH HOH 801 A HOH 358 9 HOH HOH 802 A HOH 478 9 HOH HOH 803 A HOH 222 9 HOH HOH 804 A HOH 172 9 HOH HOH 805 A HOH 303 9 HOH HOH 806 A HOH 518 9 HOH HOH 807 A HOH 201 9 HOH HOH 808 A HOH 108 9 HOH HOH 809 A HOH 376 9 HOH HOH 810 A HOH 78 9 HOH HOH 811 A HOH 95 9 HOH HOH 812 A HOH 257 9 HOH HOH 813 A HOH 451 9 HOH HOH 814 A HOH 507 9 HOH HOH 815 A HOH 249 9 HOH HOH 816 A HOH 8 9 HOH HOH 817 A HOH 519 9 HOH HOH 818 A HOH 90 9 HOH HOH 819 A HOH 200 9 HOH HOH 820 A HOH 392 9 HOH HOH 821 A HOH 239 9 HOH HOH 822 A HOH 64 9 HOH HOH 823 A HOH 493 9 HOH HOH 824 A HOH 335 9 HOH HOH 825 A HOH 393 9 HOH HOH 826 A HOH 448 9 HOH HOH 827 A HOH 221 9 HOH HOH 828 A HOH 38 9 HOH HOH 829 A HOH 314 9 HOH HOH 830 A HOH 91 9 HOH HOH 831 A HOH 389 9 HOH HOH 832 A HOH 52 9 HOH HOH 833 A HOH 298 9 HOH HOH 834 A HOH 224 9 HOH HOH 835 A HOH 34 9 HOH HOH 836 A HOH 306 9 HOH HOH 837 A HOH 242 9 HOH HOH 838 A HOH 16 9 HOH HOH 839 A HOH 179 9 HOH HOH 840 A HOH 229 9 HOH HOH 841 A HOH 94 9 HOH HOH 842 A HOH 110 9 HOH HOH 843 A HOH 130 9 HOH HOH 844 A HOH 149 9 HOH HOH 845 A HOH 182 9 HOH HOH 846 A HOH 58 9 HOH HOH 847 A HOH 423 9 HOH HOH 848 A HOH 353 9 HOH HOH 849 A HOH 259 9 HOH HOH 850 A HOH 99 9 HOH HOH 851 A HOH 312 9 HOH HOH 852 A HOH 61 9 HOH HOH 853 A HOH 178 9 HOH HOH 854 A HOH 268 9 HOH HOH 855 A HOH 43 9 HOH HOH 856 A HOH 23 9 HOH HOH 857 A HOH 520 9 HOH HOH 858 A HOH 170 9 HOH HOH 859 A HOH 400 9 HOH HOH 860 A HOH 10 9 HOH HOH 861 A HOH 388 9 HOH HOH 862 A HOH 441 9 HOH HOH 863 A HOH 204 9 HOH HOH 864 A HOH 4 9 HOH HOH 865 A HOH 92 9 HOH HOH 866 A HOH 248 9 HOH HOH 867 A HOH 188 9 HOH HOH 868 A HOH 175 9 HOH HOH 869 A HOH 96 9 HOH HOH 870 A HOH 14 9 HOH HOH 871 A HOH 104 9 HOH HOH 872 A HOH 210 9 HOH HOH 873 A HOH 46 9 HOH HOH 874 A HOH 503 9 HOH HOH 875 A HOH 37 9 HOH HOH 876 A HOH 343 9 HOH HOH 877 A HOH 297 9 HOH HOH 878 A HOH 504 9 HOH HOH 879 A HOH 87 9 HOH HOH 880 A HOH 213 9 HOH HOH 881 A HOH 355 9 HOH HOH 882 A HOH 227 9 HOH HOH 883 A HOH 28 9 HOH HOH 884 A HOH 313 9 HOH HOH 885 A HOH 505 9 HOH HOH 886 A HOH 84 9 HOH HOH 887 A HOH 5 9 HOH HOH 888 A HOH 283 9 HOH HOH 889 A HOH 21 9 HOH HOH 890 A HOH 113 9 HOH HOH 891 A HOH 510 9 HOH HOH 892 A HOH 509 9 HOH HOH 893 A HOH 60 9 HOH HOH 894 A HOH 68 9 HOH HOH 895 A HOH 3 9 HOH HOH 896 A HOH 55 9 HOH HOH 897 A HOH 70 9 HOH HOH 898 A HOH 401 9 HOH HOH 899 A HOH 20 9 HOH HOH 900 A HOH 151 9 HOH HOH 901 A HOH 2 9 HOH HOH 902 A HOH 22 9 HOH HOH 903 A HOH 51 9 HOH HOH 904 A HOH 137 9 HOH HOH 905 A HOH 165 9 HOH HOH 906 A HOH 42 9 HOH HOH 907 A HOH 76 9 HOH HOH 908 A HOH 12 9 HOH HOH 909 A HOH 49 9 HOH HOH 910 A HOH 194 9 HOH HOH 911 A HOH 153 9 HOH HOH 912 A HOH 9 9 HOH HOH 913 A HOH 217 9 HOH HOH 914 A HOH 207 9 HOH HOH 915 A HOH 29 9 HOH HOH 916 A HOH 508 9 HOH HOH 917 A HOH 39 9 HOH HOH 918 A HOH 53 9 HOH HOH 919 A HOH 397 9 HOH HOH 920 A HOH 31 9 HOH HOH 921 A HOH 320 9 HOH HOH 922 A HOH 134 9 HOH HOH 923 A HOH 338 9 HOH HOH 924 A HOH 66 9 HOH HOH 925 A HOH 363 9 HOH HOH 926 A HOH 254 9 HOH HOH 927 A HOH 30 9 HOH HOH 928 A HOH 93 9 HOH HOH 929 A HOH 215 9 HOH HOH 930 A HOH 396 9 HOH HOH 931 A HOH 18 9 HOH HOH 932 A HOH 6 9 HOH HOH 933 A HOH 211 9 HOH HOH 934 A HOH 27 9 HOH HOH 935 A HOH 177 9 HOH HOH 936 A HOH 331 9 HOH HOH 937 A HOH 311 9 HOH HOH 938 A HOH 65 9 HOH HOH 939 A HOH 54 9 HOH HOH 940 A HOH 163 9 HOH HOH 941 A HOH 80 9 HOH HOH 942 A HOH 300 9 HOH HOH 943 A HOH 240 9 HOH HOH 944 A HOH 102 9 HOH HOH 945 A HOH 136 9 HOH HOH 946 A HOH 36 9 HOH HOH 947 A HOH 461 9 HOH HOH 948 A HOH 275 9 HOH HOH 949 A HOH 326 9 HOH HOH 950 A HOH 154 9 HOH HOH 951 A HOH 260 9 HOH HOH 952 A HOH 142 9 HOH HOH 953 A HOH 75 9 HOH HOH 954 A HOH 500 9 HOH HOH 955 A HOH 167 9 HOH HOH 956 A HOH 138 9 HOH HOH 957 A HOH 73 9 HOH HOH 958 A HOH 56 9 HOH HOH 959 A HOH 463 9 HOH HOH 960 A HOH 128 9 HOH HOH 961 A HOH 266 9 HOH HOH 962 A HOH 431 9 HOH HOH 963 A HOH 382 9 HOH HOH 964 A HOH 25 9 HOH HOH 965 A HOH 115 9 HOH HOH 966 A HOH 44 9 HOH HOH 967 A HOH 187 9 HOH HOH 968 A HOH 63 9 HOH HOH 969 A HOH 77 9 HOH HOH 970 A HOH 171 9 HOH HOH 971 A HOH 7 9 HOH HOH 972 A HOH 17 9 HOH HOH 973 A HOH 118 9 HOH HOH 974 A HOH 394 9 HOH HOH 975 A HOH 413 9 HOH HOH 976 A HOH 35 9 HOH HOH 977 A HOH 403 9 HOH HOH 978 A HOH 223 9 HOH HOH 979 A HOH 371 9 HOH HOH 980 A HOH 82 9 HOH HOH 981 A HOH 160 9 HOH HOH 982 A HOH 26 9 HOH HOH 983 A HOH 522 9 HOH HOH 984 A HOH 218 9 HOH HOH 985 A HOH 45 9 HOH HOH 986 A HOH 321 9 HOH HOH 987 A HOH 79 9 HOH HOH 988 A HOH 514 9 HOH HOH 989 A HOH 159 9 HOH HOH 990 A HOH 47 9 HOH HOH 991 A HOH 155 9 HOH HOH 992 A HOH 57 9 HOH HOH 993 A HOH 374 9 HOH HOH 994 A HOH 238 9 HOH HOH 995 A HOH 24 9 HOH HOH 996 A HOH 88 9 HOH HOH 997 A HOH 157 9 HOH HOH 998 A HOH 146 9 HOH HOH 999 A HOH 101 9 HOH HOH 1000 A HOH 391 9 HOH HOH 1001 A HOH 325 9 HOH HOH 1002 A HOH 169 9 HOH HOH 1003 A HOH 32 9 HOH HOH 1004 A HOH 144 9 HOH HOH 1005 A HOH 498 9 HOH HOH 1006 A HOH 41 9 HOH HOH 1007 A HOH 412 9 HOH HOH 1008 A HOH 276 9 HOH HOH 1009 A HOH 253 9 HOH HOH 1010 A HOH 243 9 HOH HOH 1011 A HOH 119 9 HOH HOH 1012 A HOH 116 9 HOH HOH 1013 A HOH 212 9 HOH HOH 1014 A HOH 72 9 HOH HOH 1015 A HOH 195 9 HOH HOH 1016 A HOH 292 9 HOH HOH 1017 A HOH 468 9 HOH HOH 1018 A HOH 245 9 HOH HOH 1019 A HOH 367 9 HOH HOH 1020 A HOH 511 9 HOH HOH 1021 A HOH 59 9 HOH HOH 1022 A HOH 103 9 HOH HOH 1023 A HOH 164 9 HOH HOH 1024 A HOH 97 9 HOH HOH 1025 A HOH 345 9 HOH HOH 1026 A HOH 293 9 HOH HOH 1027 A HOH 19 9 HOH HOH 1028 A HOH 383 9 HOH HOH 1029 A HOH 125 9 HOH HOH 1030 A HOH 462 9 HOH HOH 1031 A HOH 126 9 HOH HOH 1032 A HOH 129 9 HOH HOH 1033 A HOH 145 9 HOH HOH 1034 A HOH 375 9 HOH HOH 1035 A HOH 256 9 HOH HOH 1036 A HOH 322 9 HOH HOH 1037 A HOH 295 9 HOH HOH 1038 A HOH 33 9 HOH HOH 1039 A HOH 62 9 HOH HOH 1040 A HOH 121 9 HOH HOH 1041 A HOH 280 9 HOH HOH 1042 A HOH 346 9 HOH HOH 1043 A HOH 288 9 HOH HOH 1044 A HOH 359 9 HOH HOH 1045 A HOH 199 9 HOH HOH 1046 A HOH 258 9 HOH HOH 1047 A HOH 106 9 HOH HOH 1048 A HOH 380 9 HOH HOH 1049 A HOH 193 9 HOH HOH 1050 A HOH 232 9 HOH HOH 1051 A HOH 262 9 HOH HOH 1052 A HOH 267 9 HOH HOH 1053 A HOH 208 9 HOH HOH 1054 A HOH 301 9 HOH HOH 1055 A HOH 255 9 HOH HOH 1056 A HOH 270 9 HOH HOH 1057 A HOH 407 9 HOH HOH 1058 A HOH 269 9 HOH HOH 1059 A HOH 395 9 HOH HOH 1060 A HOH 69 9 HOH HOH 1061 A HOH 183 9 HOH HOH 1062 A HOH 209 9 HOH HOH 1063 A HOH 111 9 HOH HOH 1064 A HOH 419 9 HOH HOH 1065 A HOH 286 9 HOH HOH 1066 A HOH 523 9 HOH HOH 1067 A HOH 483 9 HOH HOH 1068 A HOH 417 9 HOH HOH 1069 A HOH 143 9 HOH HOH 1070 A HOH 424 9 HOH HOH 1071 A HOH 83 9 HOH HOH 1072 A HOH 281 9 HOH HOH 1073 A HOH 189 9 HOH HOH 1074 A HOH 458 9 HOH HOH 1075 A HOH 411 9 HOH HOH 1076 A HOH 379 9 HOH HOH 1077 A HOH 475 9 HOH HOH 1078 A HOH 488 9 HOH HOH 1079 A HOH 405 9 HOH HOH 1080 A HOH 502 9 HOH HOH 1081 A HOH 277 9 HOH HOH 1082 A HOH 370 9 HOH HOH 1083 A HOH 356 9 HOH HOH 1084 A HOH 352 9 HOH HOH 1085 A HOH 196 9 HOH HOH 1086 A HOH 323 9 HOH HOH 1087 A HOH 484 9 HOH HOH 1088 A HOH 252 9 HOH HOH 1089 A HOH 361 9 HOH HOH 1090 A HOH 454 9 HOH HOH 1091 A HOH 499 9 HOH HOH 1092 A HOH 482 9 HOH HOH 1093 A HOH 305 9 HOH HOH 1094 A HOH 366 9 HOH HOH 1095 A HOH 495 9 HOH HOH 1096 A HOH 372 9 HOH HOH 1097 A HOH 426 9 HOH HOH 1098 A HOH 237 9 HOH HOH 1099 A HOH 139 9 HOH HOH 1100 A HOH 437 9 HOH HOH 1101 A HOH 404 9 HOH HOH 1102 A HOH 329 9 HOH HOH 1103 A HOH 418 9 HOH HOH 1104 A HOH 452 9 HOH HOH 1105 A HOH 430 9 HOH HOH 1106 A HOH 481 9 HOH HOH 1107 A HOH 415 9 HOH HOH 1108 A HOH 387 9 HOH HOH 1109 A HOH 241 9 HOH HOH 1110 A HOH 291 9 HOH HOH 1111 A HOH 336 9 HOH HOH 1112 A HOH 127 9 HOH HOH 1113 A HOH 485 9 HOH HOH 1114 A HOH 487 9 HOH HOH 1115 A HOH 185 9 HOH HOH 1116 A HOH 231 9 HOH HOH 1117 A HOH 384 9 HOH HOH 1118 A HOH 330 9 HOH HOH 1119 A HOH 109 9 HOH HOH 1120 A HOH 261 9 HOH HOH 1121 A HOH 517 9 HOH HOH 1122 A HOH 299 9 HOH HOH 1123 A HOH 158 9 HOH HOH 1124 A HOH 244 9 HOH HOH 1125 A HOH 348 9 HOH HOH 1126 A HOH 190 9 HOH HOH 1127 A HOH 233 9 HOH HOH 1128 A HOH 436 9 HOH HOH 1129 A HOH 385 9 HOH HOH 1130 A HOH 220 9 HOH HOH 1131 A HOH 334 9 HOH HOH 1132 A HOH 460 9 HOH HOH 1133 A HOH 429 9 HOH HOH 1134 A HOH 347 9 HOH HOH 1135 A HOH 490 9 HOH HOH 1136 A HOH 489 9 HOH HOH 1137 A HOH 368 9 HOH HOH 101 T HOH 198 9 HOH HOH 102 T HOH 173 9 HOH HOH 103 T HOH 166 9 HOH HOH 104 T HOH 302 9 HOH HOH 105 T HOH 147 9 HOH HOH 106 T HOH 216 9 HOH HOH 107 T HOH 273 9 HOH HOH 108 T HOH 192 9 HOH HOH 109 T HOH 15 9 HOH HOH 110 T HOH 40 9 HOH HOH 111 T HOH 521 9 HOH HOH 112 T HOH 67 9 HOH HOH 113 T HOH 162 9 HOH HOH 114 T HOH 112 9 HOH HOH 115 T HOH 11 9 HOH HOH 116 T HOH 279 9 HOH HOH 117 T HOH 515 9 HOH HOH 118 T HOH 120 9 HOH HOH 119 T HOH 50 9 HOH HOH 120 T HOH 74 9 HOH HOH 121 T HOH 184 9 HOH HOH 122 T HOH 141 9 HOH HOH 123 T HOH 13 9 HOH HOH 124 T HOH 512 9 HOH HOH 125 T HOH 191 9 HOH HOH 126 T HOH 513 9 HOH HOH 127 T HOH 124 9 HOH HOH 128 T HOH 135 9 HOH HOH 129 T HOH 214 9 HOH HOH 130 T HOH 472 9 HOH HOH 131 T HOH 150 9 HOH HOH 132 T HOH 399 9 HOH HOH 133 T HOH 272 9 HOH HOH 134 T HOH 202 9 HOH HOH 135 T HOH 309 9 HOH HOH 136 T HOH 203 9 HOH HOH 137 T HOH 315 9 HOH HOH 138 T HOH 235 9 HOH HOH 139 T HOH 414 9 HOH HOH 140 T HOH 351 9 HOH HOH 141 T HOH 341 9 HOH HOH 142 T HOH 465 9 HOH HOH 143 T HOH 317 9 HOH HOH 144 T HOH 456 9 HOH HOH 145 T HOH 132 9 HOH HOH 101 P HOH 48 9 HOH HOH 102 P HOH 131 9 HOH HOH 103 P HOH 122 9 HOH HOH 104 P HOH 332 9 HOH HOH 105 P HOH 86 9 HOH HOH 106 P HOH 100 9 HOH HOH 107 P HOH 206 9 HOH HOH 108 P HOH 304 9 HOH HOH 109 P HOH 105 9 HOH HOH 110 P HOH 176 9 HOH HOH 111 P HOH 501 9 HOH HOH 112 P HOH 140 9 HOH HOH 113 P HOH 85 9 HOH HOH 114 P HOH 148 9 HOH HOH 101 D HOH 516 9 HOH HOH 102 D HOH 205 9 HOH HOH 103 D HOH 174 9 HOH HOH 104 D HOH 133 9 HOH HOH 105 D HOH 98 9 HOH HOH 106 D HOH 289 9 HOH HOH 107 D HOH 446 9 HOH HOH 108 D HOH 226 9 HOH HOH 109 D HOH 473 9 HOH HOH 110 D HOH 377 9 HOH HOH 111 D HOH 228 9 HOH HOH 112 D HOH 180 9 HOH HOH 113 D HOH 114 9 HOH HOH 114 D HOH 81 9 HOH HOH 115 D HOH 89 9 HOH HOH 116 D HOH 373 9 HOH HOH 117 D HOH 340 9 HOH HOH 118 D HOH 386 9 HOH HOH 119 D n 1 129 A n 2 130 A n 3 131 A n 4 132 A n 5 133 A n 6 134 A n 7 135 A n 8 136 A n 9 137 A MET 138 n 10 MET 138 A PRO 139 n 11 PRO 139 A ALA 140 n 12 ALA 140 A TYR 141 n 13 TYR 141 A ALA 142 n 14 ALA 142 A CYS 143 n 15 CYS 143 A GLN 144 n 16 GLN 144 A ARG 145 n 17 ARG 145 A PRO 146 n 18 PRO 146 A THR 147 n 19 THR 147 A PRO 148 n 20 PRO 148 A LEU 149 n 21 LEU 149 A THR 150 n 22 THR 150 A HIS 151 n 23 HIS 151 A HIS 152 n 24 HIS 152 A ASN 153 n 25 ASN 153 A THR 154 n 26 THR 154 A GLY 155 n 27 GLY 155 A LEU 156 n 28 LEU 156 A SER 157 n 29 SER 157 A GLU 158 n 30 GLU 158 A ALA 159 n 31 ALA 159 A LEU 160 n 32 LEU 160 A GLU 161 n 33 GLU 161 A ILE 162 n 34 ILE 162 A LEU 163 n 35 LEU 163 A ALA 164 n 36 ALA 164 A GLU 165 n 37 GLU 165 A ALA 166 n 38 ALA 166 A ALA 167 n 39 ALA 167 A GLY 168 n 40 GLY 168 A PHE 169 n 41 PHE 169 A GLU 170 n 42 GLU 170 A GLY 171 n 43 GLY 171 A SER 172 n 44 SER 172 A GLU 173 n 45 GLU 173 A GLY 174 n 46 GLY 174 A ARG 175 n 47 ARG 175 A LEU 176 n 48 LEU 176 A LEU 177 n 49 LEU 177 A THR 178 n 50 THR 178 A PHE 179 n 51 PHE 179 A CYS 180 n 52 CYS 180 A ARG 181 n 53 ARG 181 A ALA 182 n 54 ALA 182 A ALA 183 n 55 ALA 183 A SER 184 n 56 SER 184 A VAL 185 n 57 VAL 185 A LEU 186 n 58 LEU 186 A LYS 187 n 59 LYS 187 A ALA 188 n 60 ALA 188 A LEU 189 n 61 LEU 189 A PRO 190 n 62 PRO 190 A SER 191 n 63 SER 191 A PRO 192 n 64 PRO 192 A VAL 193 n 65 VAL 193 A THR 194 n 66 THR 194 A THR 195 n 67 THR 195 A LEU 196 n 68 LEU 196 A SER 197 n 69 SER 197 A GLN 198 n 70 GLN 198 A LEU 199 n 71 LEU 199 A GLN 200 n 72 GLN 200 A GLY 201 n 73 GLY 201 A LEU 202 n 74 LEU 202 A PRO 203 n 75 PRO 203 A HIS 204 n 76 HIS 204 A PHE 205 n 77 PHE 205 A GLY 206 n 78 GLY 206 A GLU 207 n 79 GLU 207 A HIS 208 n 80 HIS 208 A SER 209 n 81 SER 209 A SER 210 n 82 SER 210 A ARG 211 n 83 ARG 211 A VAL 212 n 84 VAL 212 A VAL 213 n 85 VAL 213 A GLN 214 n 86 GLN 214 A GLU 215 n 87 GLU 215 A LEU 216 n 88 LEU 216 A LEU 217 n 89 LEU 217 A GLU 218 n 90 GLU 218 A HIS 219 n 91 HIS 219 A GLY 220 n 92 GLY 220 A VAL 221 n 93 VAL 221 A CYS 222 n 94 CYS 222 A GLU 223 n 95 GLU 223 A GLU 224 n 96 GLU 224 A VAL 225 n 97 VAL 225 A GLU 226 n 98 GLU 226 A ARG 227 n 99 ARG 227 A VAL 228 n 100 VAL 228 A ARG 229 n 101 ARG 229 A ARG 230 n 102 ARG 230 A SER 231 n 103 SER 231 A GLU 232 n 104 GLU 232 A ARG 233 n 105 ARG 233 A TYR 234 n 106 TYR 234 A GLN 235 n 107 GLN 235 A THR 236 n 108 THR 236 A MET 237 n 109 MET 237 A LYS 238 n 110 LYS 238 A LEU 239 n 111 LEU 239 A PHE 240 n 112 PHE 240 A THR 241 n 113 THR 241 A GLN 242 n 114 GLN 242 A ILE 243 n 115 ILE 243 A PHE 244 n 116 PHE 244 A GLY 245 n 117 GLY 245 A VAL 246 n 118 VAL 246 A GLY 247 n 119 GLY 247 A VAL 248 n 120 VAL 248 A LYS 249 n 121 LYS 249 A THR 250 n 122 THR 250 A ALA 251 n 123 ALA 251 A ASP 252 n 124 ASP 252 A ARG 253 n 125 ARG 253 A TRP 254 n 126 TRP 254 A TYR 255 n 127 TYR 255 A ARG 256 n 128 ARG 256 A GLU 257 n 129 GLU 257 A GLY 258 n 130 GLY 258 A LEU 259 n 131 LEU 259 A ARG 260 n 132 ARG 260 A THR 261 n 133 THR 261 A LEU 262 n 134 LEU 262 A ASP 263 n 135 ASP 263 A ASP 264 n 136 ASP 264 A LEU 265 n 137 LEU 265 A ARG 266 n 138 ARG 266 A GLU 267 n 139 GLU 267 A GLN 268 n 140 GLN 268 A PRO 269 n 141 PRO 269 A GLN 270 n 142 GLN 270 A LYS 271 n 143 LYS 271 A LEU 272 n 144 LEU 272 A THR 273 n 145 THR 273 A GLN 274 n 146 GLN 274 A GLN 275 n 147 GLN 275 A GLN 276 n 148 GLN 276 A LYS 277 n 149 LYS 277 A ALA 278 n 150 ALA 278 A GLY 279 n 151 GLY 279 A LEU 280 n 152 LEU 280 A GLN 281 n 153 GLN 281 A HIS 282 n 154 HIS 282 A HIS 283 n 155 HIS 283 A GLN 284 n 156 GLN 284 A ASP 285 n 157 ASP 285 A LEU 286 n 158 LEU 286 A SER 287 n 159 SER 287 A THR 288 n 160 THR 288 A PRO 289 n 161 PRO 289 A VAL 290 n 162 VAL 290 A LEU 291 n 163 LEU 291 A ARG 292 n 164 ARG 292 A SER 293 n 165 SER 293 A ASP 294 n 166 ASP 294 A VAL 295 n 167 VAL 295 A ASP 296 n 168 ASP 296 A ALA 297 n 169 ALA 297 A LEU 298 n 170 LEU 298 A GLN 299 n 171 GLN 299 A GLN 300 n 172 GLN 300 A VAL 301 n 173 VAL 301 A VAL 302 n 174 VAL 302 A GLU 303 n 175 GLU 303 A GLU 304 n 176 GLU 304 A ALA 305 n 177 ALA 305 A VAL 306 n 178 VAL 306 A GLY 307 n 179 GLY 307 A GLN 308 n 180 GLN 308 A ALA 309 n 181 ALA 309 A LEU 310 n 182 LEU 310 A PRO 311 n 183 PRO 311 A GLY 312 n 184 GLY 312 A ALA 313 n 185 ALA 313 A THR 314 n 186 THR 314 A VAL 315 n 187 VAL 315 A THR 316 n 188 THR 316 A LEU 317 n 189 LEU 317 A THR 318 n 190 THR 318 A GLY 319 n 191 GLY 319 A GLY 320 n 192 GLY 320 A PHE 321 n 193 PHE 321 A ARG 322 n 194 ARG 322 A ARG 323 n 195 ARG 323 A GLY 324 n 196 GLY 324 A LYS 325 n 197 LYS 325 A LEU 326 n 198 LEU 326 A GLN 327 n 199 GLN 327 A GLY 328 n 200 GLY 328 A HIS 329 n 201 HIS 329 A ASP 330 n 202 ASP 330 A VAL 331 n 203 VAL 331 A ASP 332 n 204 ASP 332 A PHE 333 n 205 PHE 333 A LEU 334 n 206 LEU 334 A ILE 335 n 207 ILE 335 A THR 336 n 208 THR 336 A HIS 337 n 209 HIS 337 A PRO 338 n 210 PRO 338 A LYS 339 n 211 LYS 339 A GLU 340 n 212 GLU 340 A GLY 341 n 213 GLY 341 A GLN 342 n 214 GLN 342 A GLU 343 n 215 GLU 343 A ALA 344 n 216 ALA 344 A GLY 345 n 217 GLY 345 A LEU 346 n 218 LEU 346 A LEU 347 n 219 LEU 347 A PRO 348 n 220 PRO 348 A ARG 349 n 221 ARG 349 A VAL 350 n 222 VAL 350 A MET 351 n 223 MET 351 A CYS 352 n 224 CYS 352 A ARG 353 n 225 ARG 353 A LEU 354 n 226 LEU 354 A GLN 355 n 227 GLN 355 A ASP 356 n 228 ASP 356 A GLN 357 n 229 GLN 357 A GLY 358 n 230 GLY 358 A LEU 359 n 231 LEU 359 A ILE 360 n 232 ILE 360 A LEU 361 n 233 LEU 361 A TYR 362 n 234 TYR 362 A HIS 363 n 235 HIS 363 A GLN 364 n 236 GLN 364 A HIS 365 n 237 HIS 365 A n 238 366 A n 239 367 A n 240 368 A n 241 369 A n 242 370 A n 243 371 A n 244 372 A n 245 373 A n 246 374 A n 247 375 A n 248 376 A n 249 377 A n 250 378 A n 251 379 A n 252 380 A n 253 381 A n 254 382 A n 255 383 A ALA 384 n 256 ALA 384 A PHE 385 n 257 PHE 385 A GLU 386 n 258 GLU 386 A ARG 387 n 259 ARG 387 A SER 388 n 260 SER 388 A PHE 389 n 261 PHE 389 A CYS 390 n 262 CYS 390 A ILE 391 n 263 ILE 391 A PHE 392 n 264 PHE 392 A ARG 393 n 265 ARG 393 A LEU 394 n 266 LEU 394 A PRO 395 n 267 PRO 395 A GLN 396 n 268 GLN 396 A PRO 397 n 269 PRO 397 A GLY 410 n 270 GLY 410 A SER 411 n 271 SER 411 A TRP 412 n 272 TRP 412 A LYS 413 n 273 LYS 413 A ALA 414 n 274 ALA 414 A VAL 415 n 275 VAL 415 A ARG 416 n 276 ARG 416 A VAL 417 n 277 VAL 417 A ASP 418 n 278 ASP 418 A LEU 419 n 279 LEU 419 A VAL 420 n 280 VAL 420 A VAL 421 n 281 VAL 421 A ALA 422 n 282 ALA 422 A PRO 423 n 283 PRO 423 A VAL 424 n 284 VAL 424 A SER 425 n 285 SER 425 A GLN 426 n 286 GLN 426 A PHE 427 n 287 PHE 427 A PRO 428 n 288 PRO 428 A PHE 429 n 289 PHE 429 A ALA 430 n 290 ALA 430 A LEU 431 n 291 LEU 431 A LEU 432 n 292 LEU 432 A SER 433 n 293 SER 433 A TRP 434 n 294 TRP 434 A THR 435 n 295 THR 435 A GLY 436 n 296 GLY 436 A SER 437 n 297 SER 437 A LYS 438 n 298 LYS 438 A LEU 439 n 299 LEU 439 A PHE 440 n 300 PHE 440 A GLN 441 n 301 GLN 441 A ARG 442 n 302 ARG 442 A GLU 443 n 303 GLU 443 A LEU 444 n 304 LEU 444 A ARG 445 n 305 ARG 445 A ARG 446 n 306 ARG 446 A PHE 447 n 307 PHE 447 A SER 448 n 308 SER 448 A ARG 449 n 309 ARG 449 A LYS 450 n 310 LYS 450 A GLU 451 n 311 GLU 451 A LYS 452 n 312 LYS 452 A GLY 453 n 313 GLY 453 A LEU 454 n 314 LEU 454 A TRP 455 n 315 TRP 455 A LEU 456 n 316 LEU 456 A ASN 457 n 317 ASN 457 A SER 458 n 318 SER 458 A HIS 459 n 319 HIS 459 A GLY 460 n 320 GLY 460 A LEU 461 n 321 LEU 461 A PHE 462 n 322 PHE 462 A ASP 463 n 323 ASP 463 A PRO 464 n 324 PRO 464 A GLU 465 n 325 GLU 465 A GLN 466 n 326 GLN 466 A LYS 467 n 327 LYS 467 A THR 468 n 328 THR 468 A PHE 469 n 329 PHE 469 A PHE 470 n 330 PHE 470 A GLN 471 n 331 GLN 471 A ALA 472 n 332 ALA 472 A ALA 473 n 333 ALA 473 A SER 474 n 334 SER 474 A GLU 475 n 335 GLU 475 A GLU 476 n 336 GLU 476 A ASP 477 n 337 ASP 477 A ILE 478 n 338 ILE 478 A PHE 479 n 339 PHE 479 A ARG 480 n 340 ARG 480 A HIS 481 n 341 HIS 481 A LEU 482 n 342 LEU 482 A GLY 483 n 343 GLY 483 A LEU 484 n 344 LEU 484 A GLU 485 n 345 GLU 485 A TYR 486 n 346 TYR 486 A LEU 487 n 347 LEU 487 A PRO 488 n 348 PRO 488 A PRO 489 n 349 PRO 489 A GLU 490 n 350 GLU 490 A GLN 491 n 351 GLN 491 A ARG 492 n 352 ARG 492 A ASN 493 n 353 ASN 493 A ALA 494 n 354 ALA 494 A DC 1 n 1 DC 1 T DG 2 n 2 DG 2 T DG 3 n 3 DG 3 T DC 4 n 4 DC 4 T DA 5 n 5 DA 5 T DT 6 n 6 DT 6 T DA 7 n 7 DA 7 T DC 8 n 8 DC 8 T DG 9 n 9 DG 9 T DC 1 n 1 DC 1 P DG 2 n 2 DG 2 P DT 3 n 3 DT 3 P DA 4 n 4 DA 4 P DG 1 n 1 DG 1 D DC 2 n 2 DC 2 D DC 3 n 3 DC 3 D DG 4 n 4 DG 4 D 1.3862 -0.2207 0.1226 1.3067 -0.4029 1.6227 0.0288 0.1744 -0.1491 -0.1150 -0.0883 -0.1324 0.1924 0.2565 0.0529 0.1195 0.0472 -0.0023 0.1250 -0.0272 0.1167 refined 12.9461 -18.4820 -14.6549 X-RAY DIFFRACTION 0.9555 -0.3515 -0.3396 0.9177 0.7192 2.1202 0.0923 0.1475 0.2049 -0.2805 -0.0305 -0.2963 -0.2579 0.1453 -0.0032 0.1553 -0.0116 0.0610 0.1673 0.0422 0.2178 refined 17.1320 8.1791 -17.0178 X-RAY DIFFRACTION 1.7602 -0.3725 -0.1562 1.6733 -0.0221 0.4622 0.0605 -0.1104 0.3299 0.1144 -0.0404 -0.0669 -0.0954 -0.0177 -0.0149 0.0919 -0.0076 0.0074 0.0788 -0.0191 0.1031 refined -1.9201 8.6398 -0.7108 X-RAY DIFFRACTION 1.4933 -0.1382 -0.3692 1.6633 0.2686 1.6275 0.0301 0.2455 -0.1481 -0.1099 -0.0603 0.1931 0.0178 -0.1982 0.0058 0.0708 -0.0023 -0.0145 0.0892 -0.0183 0.0766 refined -10.9473 -10.1186 -11.2065 X-RAY DIFFRACTION 0.5881 0.1219 0.0174 0.9176 -0.0880 0.5750 0.0652 0.2641 -0.0711 -0.2182 -0.0451 0.0348 0.0389 -0.0468 -0.0254 0.1549 0.0101 -0.0218 0.1844 -0.0196 0.0574 refined 0.2771 -8.8634 -23.3875 X-RAY DIFFRACTION X-RAY DIFFRACTION 1 chain A and resid 137:231 X-RAY DIFFRACTION 2 chain A and resid 232:289 X-RAY DIFFRACTION 3 chain A and resid 290:423 X-RAY DIFFRACTION 4 chain A and resid 424:494 X-RAY DIFFRACTION 5 chain T or chain P or chain D author_and_software_defined_assembly PISA 4 tetrameric gel filtration 4730 -36 16040 A THR 241 A O THR 113 1_555 A NA 704 H NA NA 1_555 A ILE 243 A O ILE 115 1_555 96.5 A THR 241 A O THR 113 1_555 A NA 704 H NA NA 1_555 A VAL 246 A O VAL 118 1_555 89.1 A ILE 243 A O ILE 115 1_555 A NA 704 H NA NA 1_555 A VAL 246 A O VAL 118 1_555 92.9 A THR 241 A O THR 113 1_555 A NA 704 H NA NA 1_555 P DT 3 C OP1 DT 3 1_555 171.3 A ILE 243 A O ILE 115 1_555 A NA 704 H NA NA 1_555 P DT 3 C OP1 DT 3 1_555 92.2 A VAL 246 A O VAL 118 1_555 A NA 704 H NA NA 1_555 P DT 3 C OP1 DT 3 1_555 90.2 A THR 241 A O THR 113 1_555 A NA 704 H NA NA 1_555 P HOH 110 A M O HOH 1_555 86.1 A ILE 243 A O ILE 115 1_555 A NA 704 H NA NA 1_555 P HOH 110 A M O HOH 1_555 176.5 A VAL 246 A O VAL 118 1_555 A NA 704 H NA NA 1_555 P HOH 110 A M O HOH 1_555 84.7 P DT 3 C OP1 DT 3 1_555 A NA 704 H NA NA 1_555 P HOH 110 A M O HOH 1_555 85.2 A THR 241 A O THR 113 1_555 A NA 704 H NA NA 1_555 P HOH 113 M O HOH 1_555 94.8 A ILE 243 A O ILE 115 1_555 A NA 704 H NA NA 1_555 P HOH 113 M O HOH 1_555 96.0 A VAL 246 A O VAL 118 1_555 A NA 704 H NA NA 1_555 P HOH 113 M O HOH 1_555 169.8 P DT 3 C OP1 DT 3 1_555 A NA 704 H NA NA 1_555 P HOH 113 M O HOH 1_555 84.4 P HOH 110 A M O HOH 1_555 A NA 704 H NA NA 1_555 P HOH 113 M O HOH 1_555 86.1 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 A ASP 332 A OD1 ASP 204 1_555 98.2 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 A ASP 418 A OD2 ASP 278 1_555 85.2 A ASP 332 A OD1 ASP 204 1_555 A MG 702 F MG MG 1_555 A ASP 418 A OD2 ASP 278 1_555 95.9 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 A 2KH 701 E O2A 2KH 1_555 93.7 A ASP 332 A OD1 ASP 204 1_555 A MG 702 F MG MG 1_555 A 2KH 701 E O2A 2KH 1_555 91.3 A ASP 418 A OD2 ASP 278 1_555 A MG 702 F MG MG 1_555 A 2KH 701 E O2A 2KH 1_555 172.8 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 A HOH 917 B K O HOH 1_555 166.0 A ASP 332 A OD1 ASP 204 1_555 A MG 702 F MG MG 1_555 A HOH 917 B K O HOH 1_555 90.3 A ASP 418 A OD2 ASP 278 1_555 A MG 702 F MG MG 1_555 A HOH 917 B K O HOH 1_555 82.9 A 2KH 701 E O2A 2KH 1_555 A MG 702 F MG MG 1_555 A HOH 917 B K O HOH 1_555 97.1 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 P DA 4 A C O3' DA 4 1_555 165.9 A ASP 332 A OD1 ASP 204 1_555 A MG 702 F MG MG 1_555 P DA 4 A C O3' DA 4 1_555 90.4 A ASP 418 A OD2 ASP 278 1_555 A MG 702 F MG MG 1_555 P DA 4 A C O3' DA 4 1_555 82.9 A 2KH 701 E O2A 2KH 1_555 A MG 702 F MG MG 1_555 P DA 4 A C O3' DA 4 1_555 97.2 A HOH 917 B K O HOH 1_555 A MG 702 F MG MG 1_555 P DA 4 A C O3' DA 4 1_555 0.1 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 87.2 A ASP 332 A OD1 ASP 204 1_555 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 172.5 A ASP 418 A OD2 ASP 278 1_555 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 89.7 A 2KH 701 E O2A 2KH 1_555 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 83.2 A HOH 917 B K O HOH 1_555 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 85.5 P DA 4 A C O3' DA 4 1_555 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 85.3 A ASP 330 A OD1 ASP 202 1_555 A MG 703 G MG MG 1_555 A ASP 332 A OD2 ASP 204 1_555 94.4 A ASP 330 A OD1 ASP 202 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O2A 2KH 1_555 94.0 A ASP 332 A OD2 ASP 204 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O2A 2KH 1_555 90.0 A ASP 330 A OD1 ASP 202 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O1B 2KH 1_555 172.6 A ASP 332 A OD2 ASP 204 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O1B 2KH 1_555 92.5 A 2KH 701 E O2A 2KH 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O1B 2KH 1_555 88.5 A ASP 330 A OD1 ASP 202 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O3G 2KH 1_555 86.7 A ASP 332 A OD2 ASP 204 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O3G 2KH 1_555 178.8 A 2KH 701 E O2A 2KH 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O3G 2KH 1_555 90.2 A 2KH 701 E O1B 2KH 1_555 A MG 703 G MG MG 1_555 A 2KH 701 E O3G 2KH 1_555 86.3 A ASP 330 A OD1 ASP 202 1_555 A MG 703 G MG MG 1_555 A HOH 937 K O HOH 1_555 86.8 A ASP 332 A OD2 ASP 204 1_555 A MG 703 G MG MG 1_555 A HOH 937 K O HOH 1_555 88.5 A 2KH 701 E O2A 2KH 1_555 A MG 703 G MG MG 1_555 A HOH 937 K O HOH 1_555 178.4 A 2KH 701 E O1B 2KH 1_555 A MG 703 G MG MG 1_555 A HOH 937 K O HOH 1_555 90.9 A 2KH 701 E O3G 2KH 1_555 A MG 703 G MG MG 1_555 A HOH 937 K O HOH 1_555 91.2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N VAL 290 A N VAL 162 A O GLY 328 A O GLY 200 A N THR 316 A N THR 188 A O LEU 334 A O LEU 206 A N ILE 335 A N ILE 207 A O VAL 420 A O VAL 280 A O VAL 415 A O VAL 275 A N PHE 392 A N PHE 264 A O ILE 391 A O ILE 263 A N TYR 362 A N TYR 234 A N TRP 455 A N TRP 315 A O PHE 462 A O PHE 322 A N ASP 463 A N ASP 323 A O THR 468 A O THR 328 1 A CD GLU 170 A CD GLU 42 1 Y 1 A OE1 GLU 170 A OE1 GLU 42 1 Y 1 A OE2 GLU 170 A OE2 GLU 42 1 Y 1 A CD GLN 200 A CD GLN 72 1 Y 1 A OE1 GLN 200 A OE1 GLN 72 1 Y 1 A NE2 GLN 200 A NE2 GLN 72 1 Y 1 A CG GLU 207 A CG GLU 79 1 Y 1 A CD GLU 207 A CD GLU 79 1 Y 1 A OE1 GLU 207 A OE1 GLU 79 1 Y 1 A OE2 GLU 207 A OE2 GLU 79 1 Y 1 A CD GLU 218 A CD GLU 90 1 Y 1 A OE1 GLU 218 A OE1 GLU 90 1 Y 1 A OE2 GLU 218 A OE2 GLU 90 1 Y 1 A CD GLU 223 A CD GLU 95 1 Y 1 A OE1 GLU 223 A OE1 GLU 95 1 Y 1 A OE2 GLU 223 A OE2 GLU 95 1 Y 1 A CG GLU 267 A CG GLU 139 1 Y 1 A CD GLU 267 A CD GLU 139 1 Y 1 A OE1 GLU 267 A OE1 GLU 139 1 Y 1 A OE2 GLU 267 A OE2 GLU 139 1 Y 1 A CG GLN 268 A CG GLN 140 1 Y 1 A CD GLN 268 A CD GLN 140 1 Y 1 A OE1 GLN 268 A OE1 GLN 140 1 Y 1 A NE2 GLN 268 A NE2 GLN 140 1 Y 1 A CG GLN 270 A CG GLN 142 1 Y 1 A CD GLN 270 A CD GLN 142 1 Y 1 A OE1 GLN 270 A OE1 GLN 142 1 Y 1 A NE2 GLN 270 A NE2 GLN 142 1 Y 1 A CG LYS 271 A CG LYS 143 1 Y 1 A CD LYS 271 A CD LYS 143 1 Y 1 A CE LYS 271 A CE LYS 143 1 Y 1 A NZ LYS 271 A NZ LYS 143 1 Y 1 A CG GLN 274 A CG GLN 146 1 Y 1 A CD GLN 274 A CD GLN 146 1 Y 1 A OE1 GLN 274 A OE1 GLN 146 1 Y 1 A NE2 GLN 274 A NE2 GLN 146 1 Y 1 A CD GLN 284 A CD GLN 156 1 Y 1 A OE1 GLN 284 A OE1 GLN 156 1 Y 1 A NE2 GLN 284 A NE2 GLN 156 1 Y 1 A CG ASP 296 A CG ASP 168 1 Y 1 A OD1 ASP 296 A OD1 ASP 168 1 Y 1 A OD2 ASP 296 A OD2 ASP 168 1 Y 1 A CD GLN 300 A CD GLN 172 1 Y 1 A OE1 GLN 300 A OE1 GLN 172 1 Y 1 A NE2 GLN 300 A NE2 GLN 172 1 Y 1 A CD GLU 304 A CD GLU 176 1 Y 1 A OE1 GLU 304 A OE1 GLU 176 1 Y 1 A OE2 GLU 304 A OE2 GLU 176 1 Y 1 A CD LYS 339 A CD LYS 211 1 Y 1 A CE LYS 339 A CE LYS 211 1 Y 1 A NZ LYS 339 A NZ LYS 211 1 Y 1 A OE1 GLN 355 A OE1 GLN 227 1 Y 1 A NE2 GLN 355 A NE2 GLN 227 1 Y 1 A CG ASP 356 A CG ASP 228 1 Y 1 A OD1 ASP 356 A OD1 ASP 228 1 Y 1 A OD2 ASP 356 A OD2 ASP 228 1 Y 1 A OE1 GLN 357 A OE1 GLN 229 1 Y 1 A NE2 GLN 357 A NE2 GLN 229 1 Y 1 A CG GLN 364 A CG GLN 236 1 Y 1 A CD GLN 364 A CD GLN 236 1 Y 1 A OE1 GLN 364 A OE1 GLN 236 1 Y 1 A NE2 GLN 364 A NE2 GLN 236 1 Y 1 A CG GLU 465 A CG GLU 325 1 Y 1 A CD GLU 465 A CD GLU 325 1 Y 1 A OE1 GLU 465 A OE1 GLU 325 1 Y 1 A OE2 GLU 465 A OE2 GLU 325 1 Y 1 A CD LYS 467 A CD LYS 327 1 Y 1 A CE LYS 467 A CE LYS 327 1 Y 1 A NZ LYS 467 A NZ LYS 327 1 Y 1 A CD GLU 485 A CD GLU 345 1 Y 1 A OE1 GLU 485 A OE1 GLU 345 1 Y 1 A OE2 GLU 485 A OE2 GLU 345 1 Y 1 A GLY 129 A GLY 1 1 Y 1 A SER 130 A SER 2 1 Y 1 A ALA 131 A ALA 3 1 Y 1 A ALA 132 A ALA 4 1 Y 1 A ALA 133 A ALA 5 1 Y 1 A SER 134 A SER 6 1 Y 1 A PRO 135 A PRO 7 1 Y 1 A ALA 136 A ALA 8 1 Y 1 A TRP 137 A TRP 9 1 Y 1 A GLN 366 A GLN 238 1 Y 1 A HIS 367 A HIS 239 1 Y 1 A SER 368 A SER 240 1 Y 1 A CYS 369 A CYS 241 1 Y 1 A CYS 370 A CYS 242 1 Y 1 A GLU 371 A GLU 243 1 Y 1 A SER 372 A SER 244 1 Y 1 A PRO 373 A PRO 245 1 Y 1 A THR 374 A THR 246 1 Y 1 A ARG 375 A ARG 247 1 Y 1 A LEU 376 A LEU 248 1 Y 1 A ALA 377 A ALA 249 1 Y 1 A GLN 378 A GLN 250 1 Y 1 A GLN 379 A GLN 251 1 Y 1 A SER 380 A SER 252 1 Y 1 A HIS 381 A HIS 253 1 Y 1 A MET 382 A MET 254 1 Y 1 A ASP 383 A ASP 255 1 Y 1 A A NH2 O ARG HOH 145 801 2.18 1 P P O3' C3' DT DT 3 3 -0.057 0.006 1.419 1.362 N 1 D D P OP3 DG DG 1 1 -0.117 0.012 1.607 1.490 N 1 A HIS 151 -154.26 -159.95 1 A ASN 153 -140.45 41.22 1 A THR 318 A -122.68 -152.00 1 A THR 318 B -129.13 -154.40 1 A SER 411 -162.74 -144.17 1 A ASN 493 -88.26 49.87 0.1838 0.1688 0.1695 1.501 32.372 3596 72169 4.98 98.31 0.12 random 1 FREE R-VALUE 1.50 MOLECULAR REPLACEMENT 16.63 0.90 1.11 4M04 ML FLAT BULK SOLVENT MODEL 1.501 32.372 415 3338 40 344 2539 0.006 3306 0.917 4603 12.530 1060 0.056 505 0.006 539 0.2189 0.2092 1.5203 100 2080 78.00 0.2501 0.2109 1.5411 119 2312 88.00 0.1904 0.1961 1.5631 134 2555 96.00 0.1922 0.1906 1.5865 139 2630 100.00 0.1943 0.1811 1.6113 139 2657 100.00 0.2043 0.1771 1.6377 139 2638 100.00 0.1930 0.1748 1.6659 142 2695 100.00 0.2007 0.1766 1.6962 139 2624 100.00 0.1919 0.1698 1.7288 140 2669 100.00 0.1675 0.1695 1.7641 141 2679 100.00 0.1932 0.1636 1.8025 138 2629 100.00 0.1899 0.1697 1.8444 140 2647 100.00 0.1901 0.1667 1.8905 140 2670 100.00 0.2062 0.1716 1.9416 143 2683 100.00 0.1686 0.1716 1.9988 141 2671 100.00 0.1869 0.1658 2.0633 140 2672 100.00 0.1808 0.1692 2.1370 142 2669 100.00 0.1790 0.1582 2.2225 141 2681 100.00 0.1885 0.1646 2.3237 139 2678 100.00 0.1665 0.1668 2.4461 142 2675 100.00 0.1901 0.1754 2.5993 143 2723 100.00 0.1783 0.1783 2.7999 140 2692 100.00 0.1927 0.1793 3.0815 143 2704 100.00 0.1692 0.1565 3.5269 146 2748 100.00 0.1411 0.1424 4.4417 144 2761 100.00 0.2215 0.1809 32.3797 142 2731 94.00 1.50 50.00 5VZA 73268 0.020 0.049 0.935 1 34.04 6.8 99.7 1.50 1.53 2.94 3608 0.753 0.325 0.560 0.836 1 3.7 99.3 refinement PHENIX (1.10.1_2155) data reduction HKL-2000 data scaling HKL-2000 phasing PHASER N Pre-catalytic ternary complex of human Polymerase Mu (G433S) mutant with incoming nonhydrolyzable UMPNPP 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 7 N N 8 N N 8 N N 9 N N 9 N N 9 N N 9 N N A TYR 141 A TYR 13 HELX_P A ARG 145 A ARG 17 5 AA1 5 A ASN 153 A ASN 25 HELX_P A GLU 170 A GLU 42 1 AA2 18 A SER 172 A SER 44 HELX_P A ALA 188 A ALA 60 1 AA3 17 A THR 195 A THR 67 HELX_P A GLN 200 A GLN 72 5 AA4 6 A GLY 206 A GLY 78 HELX_P A GLY 220 A GLY 92 1 AA5 15 A CYS 222 A CYS 94 HELX_P A SER 231 A SER 103 1 AA6 10 A SER 231 A SER 103 HELX_P A GLN 242 A GLN 114 1 AA7 12 A GLY 247 A GLY 119 HELX_P A GLU 257 A GLU 129 1 AA8 11 A THR 261 A THR 133 HELX_P A GLU 267 A GLU 139 1 AA9 7 A GLN 268 A GLN 140 HELX_P A LEU 272 A LEU 144 5 AB1 5 A THR 273 A THR 145 HELX_P A HIS 282 A HIS 154 1 AB2 10 A HIS 282 A HIS 154 HELX_P A SER 287 A SER 159 1 AB3 6 A ARG 292 A ARG 164 HELX_P A LEU 310 A LEU 182 1 AB4 19 A THR 318 A THR 190 HELX_P A ARG 323 A ARG 195 1 AB5 6 A GLY 345 A GLY 217 HELX_P A GLN 357 A GLN 229 1 AB6 13 A PRO 423 A PRO 283 HELX_P A SER 425 A SER 285 5 AB7 3 A GLN 426 A GLN 286 HELX_P A GLY 436 A GLY 296 1 AB8 11 A SER 437 A SER 297 HELX_P A GLY 453 A GLY 313 1 AB9 17 A SER 474 A SER 334 HELX_P A LEU 482 A LEU 342 1 AC1 9 A PRO 488 A PRO 348 HELX_P A ARG 492 A ARG 352 5 AC2 5 metalc 2.432 A THR 241 A O THR 113 1_555 A NA 704 H NA NA 1_555 metalc 2.388 A ILE 243 A O ILE 115 1_555 A NA 704 H NA NA 1_555 metalc 2.311 A VAL 246 A O VAL 118 1_555 A NA 704 H NA NA 1_555 metalc 1.998 A ASP 330 A OD2 ASP 202 1_555 A MG 702 F MG MG 1_555 metalc 2.014 A ASP 330 A OD1 ASP 202 1_555 A MG 703 G MG MG 1_555 metalc 2.049 A ASP 332 A OD1 ASP 204 1_555 A MG 702 F MG MG 1_555 metalc 2.045 A ASP 332 A OD2 ASP 204 1_555 A MG 703 G MG MG 1_555 metalc 2.052 A ASP 418 A OD2 ASP 278 1_555 A MG 702 F MG MG 1_555 metalc 2.271 A 2KH 701 E O2A 2KH 1_555 A MG 702 F MG MG 1_555 metalc 2.167 A 2KH 701 E O2A 2KH 1_555 A MG 703 G MG MG 1_555 metalc 2.054 A 2KH 701 E O1B 2KH 1_555 A MG 703 G MG MG 1_555 metalc 2.137 A 2KH 701 E O3G 2KH 1_555 A MG 703 G MG MG 1_555 metalc 2.130 B A MG 702 F MG MG 1_555 A HOH 917 K O HOH 1_555 metalc 2.135 A A MG 702 F MG MG 1_555 P DA 4 C O3' DA 4 1_555 metalc 2.079 A MG 702 F MG MG 1_555 P HOH 105 M O HOH 1_555 metalc 2.105 A MG 703 G MG MG 1_555 A HOH 937 K O HOH 1_555 metalc 2.552 A NA 704 H NA NA 1_555 P DT 3 C OP1 DT 3 1_555 metalc 2.530 A A NA 704 H NA NA 1_555 P HOH 110 M O HOH 1_555 metalc 2.388 A NA 704 H NA NA 1_555 P HOH 113 M O HOH 1_555 hydrog WATSON-CRICK A T DC 1 B N3 DC 1 1_555 D DG 4 D N1 DG 4 1_555 hydrog WATSON-CRICK B T DC 1 B N3 DC 1 1_555 D DG 4 D N1 DG 4 1_555 hydrog WATSON-CRICK A T DC 1 B N4 DC 1 1_555 D DG 4 D O6 DG 4 1_555 hydrog WATSON-CRICK B T DC 1 B N4 DC 1 1_555 D DG 4 D O6 DG 4 1_555 hydrog WATSON-CRICK A T DC 1 B O2 DC 1 1_555 D DG 4 D N2 DG 4 1_555 hydrog WATSON-CRICK B T DC 1 B O2 DC 1 1_555 D DG 4 D N2 DG 4 1_555 hydrog WATSON-CRICK A T DG 2 B N1 DG 2 1_555 D DC 3 D N3 DC 3 1_555 hydrog WATSON-CRICK B T DG 2 B N1 DG 2 1_555 D DC 3 D N3 DC 3 1_555 hydrog WATSON-CRICK A T DG 2 B N2 DG 2 1_555 D DC 3 D O2 DC 3 1_555 hydrog WATSON-CRICK B T DG 2 B N2 DG 2 1_555 D DC 3 D O2 DC 3 1_555 hydrog WATSON-CRICK A T DG 2 B O6 DG 2 1_555 D DC 3 D N4 DC 3 1_555 hydrog WATSON-CRICK B T DG 2 B O6 DG 2 1_555 D DC 3 D N4 DC 3 1_555 hydrog WATSON-CRICK T DG 3 B N1 DG 3 1_555 D DC 2 D N3 DC 2 1_555 hydrog WATSON-CRICK T DG 3 B N2 DG 3 1_555 D DC 2 D O2 DC 2 1_555 hydrog WATSON-CRICK T DG 3 B O6 DG 3 1_555 D DC 2 D N4 DC 2 1_555 hydrog WATSON-CRICK T DC 4 B N3 DC 4 1_555 D DG 1 D N1 DG 1 1_555 hydrog WATSON-CRICK T DC 4 B N4 DC 4 1_555 D DG 1 D O6 DG 1 1_555 hydrog WATSON-CRICK T DC 4 B O2 DC 4 1_555 D DG 1 D N2 DG 1 1_555 hydrog WATSON-CRICK A T DT 6 B N3 DT 6 1_555 P DA 4 C N1 DA 4 1_555 hydrog WATSON-CRICK A T DT 6 B O4 DT 6 1_555 P DA 4 C N6 DA 4 1_555 hydrog WATSON-CRICK T DA 7 B N1 DA 7 1_555 P DT 3 C N3 DT 3 1_555 hydrog WATSON-CRICK T DA 7 B N6 DA 7 1_555 P DT 3 C O4 DT 3 1_555 hydrog WATSON-CRICK T DC 8 B N3 DC 8 1_555 P DG 2 C N1 DG 2 1_555 hydrog WATSON-CRICK T DC 8 B N4 DC 8 1_555 P DG 2 C O6 DG 2 1_555 hydrog WATSON-CRICK T DC 8 B O2 DC 8 1_555 P DG 2 C N2 DG 2 1_555 hydrog WATSON-CRICK T DG 9 B N1 DG 9 1_555 P DC 1 C N3 DC 1 1_555 hydrog WATSON-CRICK T DG 9 B N2 DG 9 1_555 P DC 1 C O2 DC 1 1_555 hydrog WATSON-CRICK T DG 9 B O6 DG 9 1_555 P DC 1 C N4 DC 1 1_555 TRANSFERASE/DNA Family X, nonhomologous end-joining, DNA double strand break repair, ribonucleotide incorporation, TRANSFERASE-DNA complex A GLY 436 A GLY 296 1 A SER 437 A SER 297 -4.13 DPOLM_HUMAN UNP 1 134 Q9NP87 SPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVV QELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLSTPVLRS DVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHSCCESP TRLAQQSHMDAFERSFCIFRLPQPPGAAVGGSTRPCPSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRFSRKEKG LWLNSHGLFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA 5VZA PDB 2 1 5VZA 5VZA PDB 3 1 5VZA 5VZA PDB 4 1 5VZA 134 494 5VZA 134 494 Q9NP87 A 1 6 354 1 9 5VZA 1 9 5VZA T 2 1 9 1 4 5VZA 1 4 5VZA P 3 1 4 1 4 5VZA 1 4 5VZA D 4 1 4 1 expression tag GLY 129 5VZA A Q9NP87 UNP 1 1 expression tag SER 130 5VZA A Q9NP87 UNP 2 1 expression tag ALA 131 5VZA A Q9NP87 UNP 3 1 expression tag ALA 132 5VZA A Q9NP87 UNP 4 1 expression tag ALA 133 5VZA A Q9NP87 UNP 5 1 PRO deletion 5VZA A Q9NP87 UNP 398 1 GLY deletion 5VZA A Q9NP87 UNP 399 1 ALA deletion 5VZA A Q9NP87 UNP 400 1 ALA deletion 5VZA A Q9NP87 UNP 401 1 VAL deletion 5VZA A Q9NP87 UNP 402 1 GLY deletion 5VZA A Q9NP87 UNP 403 1 GLY deletion 5VZA A Q9NP87 UNP 404 1 SER deletion 5VZA A Q9NP87 UNP 405 1 THR deletion 5VZA A Q9NP87 UNP 406 1 ARG deletion 5VZA A Q9NP87 UNP 407 1 PRO deletion 5VZA A Q9NP87 UNP 408 1 CYS deletion 5VZA A Q9NP87 UNP 409 1 PRO linker GLY 410 5VZA A Q9NP87 UNP 410 270 1 GLY engineered mutation SER 433 5VZA A Q9NP87 UNP 433 293 2 5 3 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 290 A VAL 162 A LEU 291 A LEU 163 A GLN 327 A GLN 199 A GLY 328 A GLY 200 A THR 314 A THR 186 A LEU 317 A LEU 189 A VAL 331 A VAL 203 A THR 336 A THR 208 A SER 411 A SER 271 A VAL 421 A VAL 281 A ARG 387 A ARG 259 A GLN 396 A GLN 268 A ILE 360 A ILE 232 A TYR 362 A TYR 234 A TRP 455 A TRP 315 A ASN 457 A ASN 317 A GLY 460 A GLY 320 A ASP 463 A ASP 323 A THR 468 A THR 328 A PHE 469 A PHE 329 binding site for residue 2KH A 701 A 2KH 701 Software 27 binding site for residue MG A 702 A MG 702 Software 8 binding site for residue MG A 703 A MG 703 Software 5 binding site for residue NA A 704 A NA 704 Software 6 binding site for residue EDO A 705 A EDO 705 Software 5 binding site for residue EDO A 706 A EDO 706 Software 4 A GLY 319 A GLY 191 27 1_555 A GLY 320 A GLY 192 27 1_555 A ARG 323 A ARG 195 27 1_555 A LYS 325 A LYS 197 27 1_555 A GLY 328 A GLY 200 27 1_555 A HIS 329 A HIS 201 27 1_555 A ASP 330 A ASP 202 27 1_555 A ASP 332 A ASP 204 27 1_555 A SER 433 A SER 293 27 1_555 A TRP 434 A TRP 294 27 1_555 A GLY 436 A GLY 296 27 1_555 A LYS 438 A LYS 298 27 1_555 A GLN 441 A GLN 301 27 1_555 A MG 702 F MG 27 1_555 A MG 703 G MG 27 1_555 A HOH 861 K HOH 27 1_555 A HOH 868 K HOH 27 1_555 A HOH 870 K HOH 27 1_555 A HOH 917 K HOH 27 1_555 A HOH 937 K HOH 27 1_555 A HOH 951 K HOH 27 1_555 A HOH 972 K HOH 27 1_555 A HOH 981 K HOH 27 1_555 A HOH 1004 K HOH 27 1_555 P DA 4 C DA 4 27 1_555 P HOH 105 M HOH 27 1_555 T DA 5 B DA 5 27 1_555 A ASP 330 A ASP 202 8 1_555 A ASP 332 A ASP 204 8 1_555 A ASP 418 A ASP 278 8 1_555 A 2KH 701 E 2KH 8 1_555 A MG 703 G MG 8 1_555 A HOH 917 K HOH 8 1_555 P DA 4 C DA 4 8 1_555 P HOH 105 M HOH 8 1_555 A ASP 330 A ASP 202 5 1_555 A ASP 332 A ASP 204 5 1_555 A 2KH 701 E 2KH 5 1_555 A MG 702 F MG 5 1_555 A HOH 937 K HOH 5 1_555 A THR 241 A THR 113 6 1_555 A ILE 243 A ILE 115 6 1_555 A VAL 246 A VAL 118 6 1_555 P DT 3 C DT 3 6 1_555 P HOH 110 M HOH 6 1_555 P HOH 113 M HOH 6 1_555 A PRO 190 A PRO 62 5 1_555 A SER 191 A SER 63 5 1_555 A PRO 192 A PRO 64 5 1_555 A GLN 198 A GLN 70 5 1_555 A HOH 848 K HOH 5 1_555 A PRO 146 A PRO 18 4 1_555 A PRO 488 A PRO 348 4 1_555 A GLN 491 A GLN 351 4 1_555 A HOH 885 K HOH 4 1_555 19 P 21 21 21