0.023047 0.000000 0.000000 0.000000 0.023047 0.000000 0.000000 0.000000 0.006119 0.000000 0.000000 0.000000 Rezaei Araghi, R. Jenson, J.M. Grant, R.A. Keating, A.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.000 90.000 90.000 43.390 43.390 163.430 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C7 H15 N O2 145.199 n 2-methyl-L-norleucine L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C6 H13 N O2 131.173 n NORLEUCINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N C N 2 N O N 3 N C N 4 N H N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N N N 29 N C N 30 N N N 31 N N N 32 N O N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N O N 55 N N N 56 N O N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 S C N 67 N C N 68 N O N 69 N C N 70 N C N 71 N O N 72 N O N 73 N O N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N N N 82 R C N 83 N C N 84 N O N 85 N C N 86 N S N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 S C N 97 N C N 98 N O N 99 N C N 100 N C N 101 N C N 102 N O N 103 N N N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N N N 116 S C N 117 N C N 118 N O N 119 N C N 120 N C N 121 N C N 122 N O N 123 N O N 124 N O N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N N N 135 N C N 136 N C N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 N C Y 149 N C Y 150 N N Y 151 N C Y 152 N C Y 153 N N N 154 N O N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N O N 166 N H N 167 N H N 168 N N N 169 S C N 170 N C N 171 N O N 172 S C N 173 N C N 174 N C N 175 N C N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N N N 191 S C N 192 N C N 193 N O N 194 N C N 195 N C N 196 N C N 197 N C N 198 N O N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 S C N 214 N C N 215 N O N 216 N C N 217 N C N 218 N C N 219 N C N 220 N N N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N S N 244 N C N 245 N O N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N C N 258 N N N 259 N O N 260 S C N 261 N C N 262 N C N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 N H N 284 N H N 285 N N N 286 S C N 287 N C N 288 N O N 289 N O N 290 N C N 291 N C N 292 N C N 293 N C N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C N 335 N C N 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C N 352 N O N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 R C N 366 N O N 367 N C N 368 N O N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N N N 379 S C N 380 N C N 381 N O N 382 N C Y 383 N C Y 384 N C Y 385 N C Y 386 N N Y 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N C N 392 N O N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C N 416 N O N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N N N 430 S C N 431 N C N 432 N O N 433 N C N 434 N C N 435 N C N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N ZN N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing Y 146 N sing Y 147 N doub Y 148 N doub N 149 N sing Y 150 N sing N 151 N sing Y 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N doub N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing Y 301 N doub Y 302 N sing Y 303 N sing N 304 N sing Y 305 N doub N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing Y 370 N doub Y 371 N sing Y 372 N sing N 373 N sing Y 374 N doub Y 375 N sing Y 376 N sing N 377 N sing Y 378 N sing Y 379 N doub N 380 N sing Y 381 N doub N 382 N sing Y 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing Y 398 N doub Y 399 N sing Y 400 N sing N 401 N sing Y 402 N doub N 403 N sing Y 404 N doub N 405 N sing Y 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N doub N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing US Proc. Natl. Acad. Sci. U.S.A. PNASA6 0040 1091-6490 115 E886 E895 10.1073/pnas.1712952115 29339518 Iterative optimization yields Mcl-1-targeting stapled peptides with selective cytotoxicity to Mcl-1-dependent cancer cells. 2018 10.2210/pdb5w89/pdb pdb_00005w89 100 1 PIXEL 2017-04-14 DECTRIS EIGER X 16M SINGLE WAVELENGTH M x-ray 1 0.97918 1.0 24-ID-E APS 0.97918 SYNCHROTRON APS BEAMLINE 24-ID-E 17249.705 Induced myeloid leukemia cell differentiation protein Mcl-1 UNP residues 172-321 1 man polymer 2497.937 modified Bim BH3 peptide SAH-MS1-18 1 syn polymer 65.409 ZINC ION 2 syn non-polymer 18.015 water 124 nat water Bcl-2-like protein 3,Bcl2-L-3,Bcl-2-related protein EAT/mcl1,mcl1/EAT no no GDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV GDELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV A polypeptide(L) no yes (ACE)IW(NLE)(MK8)QEL(MK8)RLGDEINARYAR(NH2) XIWLLQELLRLGDEINARYARX B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Human sample 1 151 MCL1, BCL2L3 9606 Homo sapiens 83333 Escherichia coli K-12 Biological sequence 1 1.95 36.85 VAPOR DIFFUSION, HANGING DROP 9.0 Reservior: 25% PEG 3350, 50mM Tris pH 9.0, 0.2 M Ammonium acetate; Protein: 408 uM in 20 mM TRis , 10 mM TCEP, 5mM Zn2SO4 300 citation citation_author citation atom_site chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_conn_type repository Initial release Database references Database references Atomic model Data collection Database references Derived calculations 1 0 2018-01-17 1 1 2018-01-31 1 2 2018-02-14 2 0 2023-11-15 _citation.journal_abbrev _citation.pdbx_database_id_PubMed _citation.title _citation.journal_volume _citation.page_first _citation.page_last _atom_site.auth_atom_id _atom_site.label_atom_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_conn_type.id N RCSB Y RCSB 2017-06-21 REL REL 1 A O HOH 606 6.35 ZN ZINC ION HOH water 9606 human Homo sapiens sample 1 22 ZN 1 3 ZN ZN 401 A ZN 2 3 ZN ZN 402 A HOH 56 4 HOH HOH 501 A HOH 29 4 HOH HOH 502 A HOH 76 4 HOH HOH 503 A HOH 31 4 HOH HOH 504 A HOH 49 4 HOH HOH 505 A HOH 115 4 HOH HOH 506 A HOH 110 4 HOH HOH 507 A HOH 120 4 HOH HOH 508 A HOH 9 4 HOH HOH 509 A HOH 85 4 HOH HOH 510 A HOH 32 4 HOH HOH 511 A HOH 91 4 HOH HOH 512 A HOH 13 4 HOH HOH 513 A HOH 7 4 HOH HOH 514 A HOH 82 4 HOH HOH 515 A HOH 77 4 HOH HOH 516 A HOH 21 4 HOH HOH 517 A HOH 99 4 HOH HOH 518 A HOH 50 4 HOH HOH 519 A HOH 34 4 HOH HOH 520 A HOH 3 4 HOH HOH 521 A HOH 44 4 HOH HOH 522 A HOH 66 4 HOH HOH 523 A HOH 1 4 HOH HOH 524 A HOH 26 4 HOH HOH 525 A HOH 64 4 HOH HOH 526 A HOH 81 4 HOH HOH 527 A HOH 27 4 HOH HOH 528 A HOH 65 4 HOH HOH 529 A HOH 121 4 HOH HOH 530 A HOH 12 4 HOH HOH 531 A HOH 17 4 HOH HOH 532 A HOH 97 4 HOH HOH 533 A HOH 5 4 HOH HOH 534 A HOH 16 4 HOH HOH 535 A HOH 111 4 HOH HOH 536 A HOH 33 4 HOH HOH 537 A HOH 95 4 HOH HOH 538 A HOH 6 4 HOH HOH 539 A HOH 71 4 HOH HOH 540 A HOH 10 4 HOH HOH 541 A HOH 112 4 HOH HOH 542 A HOH 20 4 HOH HOH 543 A HOH 48 4 HOH HOH 544 A HOH 24 4 HOH HOH 545 A HOH 11 4 HOH HOH 546 A HOH 14 4 HOH HOH 547 A HOH 25 4 HOH HOH 548 A HOH 15 4 HOH HOH 549 A HOH 58 4 HOH HOH 550 A HOH 70 4 HOH HOH 551 A HOH 74 4 HOH HOH 552 A HOH 51 4 HOH HOH 553 A HOH 18 4 HOH HOH 554 A HOH 114 4 HOH HOH 555 A HOH 67 4 HOH HOH 556 A HOH 45 4 HOH HOH 557 A HOH 37 4 HOH HOH 558 A HOH 2 4 HOH HOH 559 A HOH 106 4 HOH HOH 560 A HOH 23 4 HOH HOH 561 A HOH 109 4 HOH HOH 562 A HOH 86 4 HOH HOH 563 A HOH 72 4 HOH HOH 564 A HOH 93 4 HOH HOH 565 A HOH 36 4 HOH HOH 566 A HOH 53 4 HOH HOH 567 A HOH 46 4 HOH HOH 568 A HOH 55 4 HOH HOH 569 A HOH 63 4 HOH HOH 570 A HOH 88 4 HOH HOH 571 A HOH 47 4 HOH HOH 572 A HOH 108 4 HOH HOH 573 A HOH 30 4 HOH HOH 574 A HOH 35 4 HOH HOH 575 A HOH 8 4 HOH HOH 576 A HOH 87 4 HOH HOH 577 A HOH 92 4 HOH HOH 578 A HOH 43 4 HOH HOH 579 A HOH 113 4 HOH HOH 580 A HOH 118 4 HOH HOH 581 A HOH 83 4 HOH HOH 582 A HOH 42 4 HOH HOH 583 A HOH 80 4 HOH HOH 584 A HOH 40 4 HOH HOH 585 A HOH 41 4 HOH HOH 586 A HOH 123 4 HOH HOH 587 A HOH 69 4 HOH HOH 588 A HOH 39 4 HOH HOH 589 A HOH 79 4 HOH HOH 590 A HOH 78 4 HOH HOH 591 A HOH 119 4 HOH HOH 592 A HOH 75 4 HOH HOH 593 A HOH 107 4 HOH HOH 594 A HOH 104 4 HOH HOH 595 A HOH 38 4 HOH HOH 596 A HOH 94 4 HOH HOH 597 A HOH 19 4 HOH HOH 598 A HOH 105 4 HOH HOH 599 A HOH 84 4 HOH HOH 600 A HOH 103 4 HOH HOH 601 A HOH 102 4 HOH HOH 602 A HOH 90 4 HOH HOH 603 A HOH 61 4 HOH HOH 604 A HOH 68 4 HOH HOH 605 A HOH 98 4 HOH HOH 606 A HOH 59 4 HOH HOH 101 B HOH 28 4 HOH HOH 102 B HOH 124 4 HOH HOH 103 B HOH 122 4 HOH HOH 104 B HOH 73 4 HOH HOH 105 B HOH 62 4 HOH HOH 106 B HOH 89 4 HOH HOH 107 B HOH 22 4 HOH HOH 108 B HOH 57 4 HOH HOH 109 B HOH 4 4 HOH HOH 110 B HOH 60 4 HOH HOH 111 B HOH 52 4 HOH HOH 112 B HOH 116 4 HOH HOH 113 B HOH 100 4 HOH HOH 114 B HOH 54 4 HOH HOH 115 B HOH 96 4 HOH HOH 116 B HOH 101 4 HOH HOH 117 B HOH 117 4 HOH HOH 118 B GLY 171 n 1 GLY 171 A ASP 172 n 2 ASP 172 A GLU 173 n 3 GLU 173 A LEU 174 n 4 LEU 174 A TYR 175 n 5 TYR 175 A ARG 176 n 6 ARG 176 A GLN 177 n 7 GLN 177 A SER 178 n 8 SER 178 A LEU 179 n 9 LEU 179 A GLU 180 n 10 GLU 180 A ILE 181 n 11 ILE 181 A ILE 182 n 12 ILE 182 A SER 183 n 13 SER 183 A ARG 184 n 14 ARG 184 A TYR 185 n 15 TYR 185 A LEU 186 n 16 LEU 186 A ARG 187 n 17 ARG 187 A GLU 188 n 18 GLU 188 A GLN 189 n 19 GLN 189 A ALA 190 n 20 ALA 190 A THR 191 n 21 THR 191 A n 22 192 A n 23 193 A n 24 194 A n 25 195 A n 26 196 A n 27 197 A n 28 198 A n 29 199 A n 30 200 A n 31 201 A SER 202 n 32 SER 202 A GLY 203 n 33 GLY 203 A ALA 204 n 34 ALA 204 A THR 205 n 35 THR 205 A SER 206 n 36 SER 206 A ARG 207 n 37 ARG 207 A LYS 208 n 38 LYS 208 A ALA 209 n 39 ALA 209 A LEU 210 n 40 LEU 210 A GLU 211 n 41 GLU 211 A THR 212 n 42 THR 212 A LEU 213 n 43 LEU 213 A ARG 214 n 44 ARG 214 A ARG 215 n 45 ARG 215 A VAL 216 n 46 VAL 216 A GLY 217 n 47 GLY 217 A ASP 218 n 48 ASP 218 A GLY 219 n 49 GLY 219 A VAL 220 n 50 VAL 220 A GLN 221 n 51 GLN 221 A ARG 222 n 52 ARG 222 A ASN 223 n 53 ASN 223 A HIS 224 n 54 HIS 224 A GLU 225 n 55 GLU 225 A THR 226 n 56 THR 226 A ALA 227 n 57 ALA 227 A PHE 228 n 58 PHE 228 A GLN 229 n 59 GLN 229 A GLY 230 n 60 GLY 230 A MET 231 n 61 MET 231 A LEU 232 n 62 LEU 232 A ARG 233 n 63 ARG 233 A LYS 234 n 64 LYS 234 A LEU 235 n 65 LEU 235 A ASP 236 n 66 ASP 236 A ILE 237 n 67 ILE 237 A LYS 238 n 68 LYS 238 A ASN 239 n 69 ASN 239 A GLU 240 n 70 GLU 240 A ASP 241 n 71 ASP 241 A ASP 242 n 72 ASP 242 A VAL 243 n 73 VAL 243 A LYS 244 n 74 LYS 244 A SER 245 n 75 SER 245 A LEU 246 n 76 LEU 246 A SER 247 n 77 SER 247 A ARG 248 n 78 ARG 248 A VAL 249 n 79 VAL 249 A MET 250 n 80 MET 250 A ILE 251 n 81 ILE 251 A HIS 252 n 82 HIS 252 A VAL 253 n 83 VAL 253 A PHE 254 n 84 PHE 254 A SER 255 n 85 SER 255 A ASP 256 n 86 ASP 256 A GLY 257 n 87 GLY 257 A VAL 258 n 88 VAL 258 A THR 259 n 89 THR 259 A ASN 260 n 90 ASN 260 A TRP 261 n 91 TRP 261 A GLY 262 n 92 GLY 262 A ARG 263 n 93 ARG 263 A ILE 264 n 94 ILE 264 A VAL 265 n 95 VAL 265 A THR 266 n 96 THR 266 A LEU 267 n 97 LEU 267 A ILE 268 n 98 ILE 268 A SER 269 n 99 SER 269 A PHE 270 n 100 PHE 270 A GLY 271 n 101 GLY 271 A ALA 272 n 102 ALA 272 A PHE 273 n 103 PHE 273 A VAL 274 n 104 VAL 274 A ALA 275 n 105 ALA 275 A LYS 276 n 106 LYS 276 A HIS 277 n 107 HIS 277 A LEU 278 n 108 LEU 278 A LYS 279 n 109 LYS 279 A THR 280 n 110 THR 280 A ILE 281 n 111 ILE 281 A ASN 282 n 112 ASN 282 A GLN 283 n 113 GLN 283 A GLU 284 n 114 GLU 284 A SER 285 n 115 SER 285 A CYS 286 n 116 CYS 286 A ILE 287 n 117 ILE 287 A GLU 288 n 118 GLU 288 A PRO 289 n 119 PRO 289 A LEU 290 n 120 LEU 290 A ALA 291 n 121 ALA 291 A GLU 292 n 122 GLU 292 A SER 293 n 123 SER 293 A ILE 294 n 124 ILE 294 A THR 295 n 125 THR 295 A ASP 296 n 126 ASP 296 A VAL 297 n 127 VAL 297 A LEU 298 n 128 LEU 298 A VAL 299 n 129 VAL 299 A ARG 300 n 130 ARG 300 A THR 301 n 131 THR 301 A LYS 302 n 132 LYS 302 A ARG 303 n 133 ARG 303 A ASP 304 n 134 ASP 304 A TRP 305 n 135 TRP 305 A LEU 306 n 136 LEU 306 A VAL 307 n 137 VAL 307 A LYS 308 n 138 LYS 308 A GLN 309 n 139 GLN 309 A ARG 310 n 140 ARG 310 A GLY 311 n 141 GLY 311 A TRP 312 n 142 TRP 312 A ASP 313 n 143 ASP 313 A GLY 314 n 144 GLY 314 A PHE 315 n 145 PHE 315 A VAL 316 n 146 VAL 316 A GLU 317 n 147 GLU 317 A PHE 318 n 148 PHE 318 A PHE 319 n 149 PHE 319 A HIS 320 n 150 HIS 320 A VAL 321 n 151 VAL 321 A ACE 0 n 1 ACE 0 B ILE 1 n 2 ILE 1 B TRP 2 n 3 TRP 2 B NLE 3 n 4 NLE 3 B MK8 4 n 5 MK8 4 B GLN 5 n 6 GLN 5 B GLU 6 n 7 GLU 6 B LEU 7 n 8 LEU 7 B MK8 8 n 9 MK8 8 B ARG 9 n 10 ARG 9 B LEU 10 n 11 LEU 10 B GLY 11 n 12 GLY 11 B ASP 12 n 13 ASP 12 B GLU 13 n 14 GLU 13 B ILE 14 n 15 ILE 14 B ASN 15 n 16 ASN 15 B ALA 16 n 17 ALA 16 B ARG 17 n 18 ARG 17 B TYR 18 n 19 TYR 18 B ALA 19 n 20 ALA 19 B ARG 20 n 21 ARG 20 B n 22 21 B author_and_software_defined_assembly PISA 2 dimeric none 1950 -46 8330 A GLU 188 A OE2 GLU 18 1_555 A ZN 401 C ZN ZN 1_555 A HIS 224 A NE2 HIS 54 1_555 59.2 A GLU 188 A OE2 GLU 18 1_555 A ZN 401 C ZN ZN 1_555 A HOH 579 E O HOH 1_555 104.8 A HIS 224 A NE2 HIS 54 1_555 A ZN 401 C ZN ZN 1_555 A HOH 579 E O HOH 1_555 51.1 A GLU 188 A OE2 GLU 18 1_555 A ZN 401 C ZN ZN 1_555 A HOH 586 E O HOH 1_555 115.9 A HIS 224 A NE2 HIS 54 1_555 A ZN 401 C ZN ZN 1_555 A HOH 586 E O HOH 1_555 159.8 A HOH 579 E O HOH 1_555 A ZN 401 C ZN ZN 1_555 A HOH 586 E O HOH 1_555 119.3 A GLU 240 A OE2 GLU 70 1_555 A ZN 402 D ZN ZN 1_555 A HIS 252 A NE2 HIS 82 1_555 90.7 A GLU 240 A OE2 GLU 70 1_555 A ZN 402 D ZN ZN 1_555 A CYS 286 A SG CYS 116 1_555 109.8 A HIS 252 A NE2 HIS 82 1_555 A ZN 402 D ZN ZN 1_555 A CYS 286 A SG CYS 116 1_555 93.8 A GLU 240 A OE2 GLU 70 1_555 A ZN 402 D ZN ZN 1_555 A HOH 585 E O HOH 1_555 103.5 A HIS 252 A NE2 HIS 82 1_555 A ZN 402 D ZN ZN 1_555 A HOH 585 E O HOH 1_555 34.6 A CYS 286 A SG CYS 116 1_555 A ZN 402 D ZN ZN 1_555 A HOH 585 E O HOH 1_555 117.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A GLY 192 A GLY 22 1 Y 1 A ALA 193 A ALA 23 1 Y 1 A LYS 194 A LYS 24 1 Y 1 A ASP 195 A ASP 25 1 Y 1 A THR 196 A THR 26 1 Y 1 A LYS 197 A LYS 27 1 Y 1 A PRO 198 A PRO 28 1 Y 1 A MET 199 A MET 29 1 Y 1 A GLY 200 A GLY 30 1 Y 1 A ARG 201 A ARG 31 1 Y 1 B NH2 21 B NH2 22 1 Y 1 A A HZ3 OE1 LYS GLU 279 284 1.51 1 A A HH11 O ARG HOH 303 502 1.55 1 A A O O HOH HOH 503 570 1.98 1 A A NZ OE1 LYS GLU 279 284 2.09 1 3.41 0.50 120.30 123.71 A A A NE CZ NH1 ARG ARG ARG 214 214 214 N 1 -3.16 0.50 120.30 117.14 A A A NE CZ NH2 ARG ARG ARG 214 214 214 N 1 A A HE2 ZN HIS ZN 252 402 1.22 1_555 5_645 1 A B O HH21 ALA ARG 190 17 1.52 1_555 5_555 1 A ASP 172 78.58 79.62 97.790 31.5563 9.640 0.1855 0.1420 0.1442 1.4200 19.4050 1518 30358 5.0000 99.1800 0.1200 1 FREE R-VALUE 1.380 15.7800 0.9000 1.1100 1.4200 19.4050 124 1443 23.16 39.88 2 0 1317 162 0.008 1355 0.865 1826 0.058 200 0.005 233 24.070 511 0.2565 0.0000 0.1747 1.4658 135 2565 2700 11 100.0000 0.2346 0.0000 0.1513 1.5182 136 2584 2720 11 100.0000 0.2313 0.0000 0.1524 1.5790 136 2591 2727 11 100.0000 0.1734 0.0000 0.1261 1.6508 136 2589 2725 11 100.0000 0.1942 0.0000 0.1329 1.7378 138 2611 2749 11 100.0000 0.1880 0.0000 0.1281 1.8466 136 2588 2724 11 100.0000 0.1869 0.0000 0.1307 1.9890 139 2637 2776 11 100.0000 0.1691 0.0000 0.1259 2.1890 137 2616 2753 11 99.0000 0.1585 0.0000 0.1308 2.5051 138 2615 2753 11 99.0000 0.1740 0.0000 0.1439 3.1540 141 2673 2814 11 98.0000 0.1982 0.0000 0.1535 19.4064 146 2771 2917 11 96.0000 1.420 19.405 5W89 30358 -3.000 0.999 0.083 0.085 1.147 1 15.970 525289 17.304 920 99.100 1.326 1.420 1.460 1.850 38189 2216 2216 0.728 1.367 1 17.233 100.000 0.993 1.460 1.500 2.620 37686 2172 2172 0.784 1.024 1 17.351 100.000 0.782 1.500 1.540 3.400 34977 2081 2080 0.836 0.806 1 16.816 100.000 0.633 1.540 1.590 4.320 36381 2027 2027 0.913 0.652 1 17.948 100.000 0.471 1.590 1.640 5.910 35020 1989 1989 0.949 0.486 1 17.607 100.000 0.404 1.640 1.700 6.790 32140 1932 1930 0.953 0.417 1 16.653 99.900 0.325 1.700 1.760 8.410 31764 1853 1843 0.973 0.335 1 17.235 99.500 0.247 1.760 1.830 11.690 33027 1796 1795 0.986 0.254 1 18.399 99.900 0.200 1.830 1.910 14.400 31198 1720 1718 0.988 0.206 1 18.159 99.900 0.163 1.910 2.010 17.920 28861 1651 1644 0.994 0.168 1 17.555 99.600 0.128 2.010 2.120 22.140 27921 1589 1580 0.995 0.132 1 17.672 99.400 0.110 2.120 2.250 25.480 25393 1498 1487 0.997 0.113 1 17.077 99.300 0.099 2.250 2.400 27.160 21605 1420 1395 0.996 0.103 1 15.487 98.200 0.087 2.400 2.590 31.440 22871 1328 1310 0.998 0.089 1 17.459 98.600 0.077 2.590 2.840 33.860 21759 1228 1211 0.998 0.079 1 17.968 98.600 0.070 2.840 3.180 35.890 19027 1122 1098 0.998 0.072 1 17.329 97.900 0.063 3.180 3.670 38.910 17094 1014 988 0.999 0.064 1 17.302 97.400 0.056 3.670 4.490 38.490 13091 862 825 0.998 0.057 1 15.868 95.700 0.052 4.490 6.350 39.570 11289 702 664 0.999 0.054 1 17.002 94.600 0.053 6.350 19.405 38.830 5996 429 385 0.999 0.055 1 15.574 89.700 data scaling XSCALE refinement PHENIX 1.11.1_2575 data extraction PDB_EXTRACT 3.22 data reduction XDS phasing PHASER N Crystal structure of human Mcl-1 in complex with modified Bim BH3 peptide SAH-MS1-18 1 N N 2 N N 3 N N 3 N N 4 N N 4 N N A ASP 172 A ASP 2 HELX_P A GLU 188 A GLU 18 1 AA1 17 A GLY 203 A GLY 33 HELX_P A HIS 224 A HIS 54 1 AA2 22 A HIS 224 A HIS 54 HELX_P A ASP 236 A ASP 66 1 AA3 13 A ASN 239 A ASN 69 HELX_P A ASP 256 A ASP 86 1 AA4 18 A ASN 260 A ASN 90 HELX_P A ILE 281 A ILE 111 1 AA5 22 A GLN 283 A GLN 113 HELX_P A SER 285 A SER 115 5 AA6 3 A CYS 286 A CYS 116 HELX_P A GLN 309 A GLN 139 1 AA7 24 A ARG 310 A ARG 140 HELX_P A PHE 319 A PHE 149 1 AA8 10 B ILE 1 B ILE 2 HELX_P B ARG 20 B ARG 21 1 AA9 20 covale 1.329 both B ACE 0 B C ACE 1 1_555 B ILE 1 B N ILE 2 1_555 covale 1.324 both B TRP 2 B C TRP 3 1_555 B NLE 3 B N NLE 4 1_555 covale 1.325 both B NLE 3 B C NLE 4 1_555 B MK8 4 B N MK8 5 1_555 covale 1.318 both B MK8 4 B C MK8 5 1_555 B GLN 5 B N GLN 6 1_555 covale 1.408 none B MK8 4 B CE MK8 5 1_555 B MK8 8 B CE MK8 9 1_555 covale 1.337 both B LEU 7 B C LEU 8 1_555 B MK8 8 B N MK8 9 1_555 covale 1.318 both B MK8 8 B C MK8 9 1_555 B ARG 9 B N ARG 10 1_555 metalc 1.821 A GLU 188 A OE2 GLU 18 1_555 A ZN 401 C ZN ZN 1_555 metalc 1.937 A HIS 224 A NE2 HIS 54 1_555 A ZN 401 C ZN ZN 5_545 metalc 1.919 A GLU 240 A OE2 GLU 70 1_555 A ZN 402 D ZN ZN 1_555 metalc 2.073 A HIS 252 A NE2 HIS 82 1_555 A ZN 402 D ZN ZN 5_645 metalc 2.253 A CYS 286 A SG CYS 116 1_555 A ZN 402 D ZN ZN 1_555 metalc 2.175 A ZN 401 C ZN ZN 1_555 A HOH 579 E O HOH 1_555 metalc 2.176 A ZN 401 C ZN ZN 1_555 A HOH 586 E O HOH 1_555 metalc 2.302 A ZN 402 D ZN ZN 1_555 A HOH 585 E O HOH 1_555 PEPTIDE BINDING PROTEIN Stapled peptide, BCL-2 family, BH3 domain, apoptosis, PEPTIDE BINDING PROTEIN MCL1_HUMAN UNP 1 172 Q07820 DELYRQSLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMI HVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHV 5W89 PDB 2 1 5W89 172 321 5W89 172 321 Q07820 A 1 2 151 0 21 5W89 0 21 5W89 B 2 1 22 1 expression tag GLY 171 5W89 A Q07820 UNP 1 binding site for residue ZN A 401 A ZN 401 Software 4 binding site for residue ZN A 402 A ZN 402 Software 4 A GLU 188 A GLU 18 4 1_555 A HIS 224 A HIS 54 4 5_555 A HOH 579 E HOH 4 1_555 A HOH 586 E HOH 4 1_555 A GLU 240 A GLU 70 4 1_555 A HIS 252 A HIS 82 4 5_655 A CYS 286 A CYS 116 4 1_555 A HOH 585 E HOH 4 1_555 92 P 41 21 2