data_5XWG # _entry.id 5XWG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5XWG pdb_00005xwg 10.2210/pdb5xwg/pdb WWPDB D_1300004290 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-11 2 'Structure model' 1 1 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5XWG _pdbx_database_status.recvd_initial_deposition_date 2017-06-29 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kanazawa, H.' 1 ? 'Kondo, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Inorg. Biochem.' _citation.journal_id_ASTM JIBIDJ _citation.journal_id_CSD 0525 _citation.journal_id_ISSN 1873-3344 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 176 _citation.language ? _citation.page_first 140 _citation.page_last 143 _citation.title 'Crystal structure of a novel RNA motif that allows for precise positioning of a single metal ion.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.jinorgbio.2017.08.029 _citation.pdbx_database_id_PubMed 28898762 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kanazawa, H.' 1 ? primary 'Kondo, J.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(P*CP*GP*CP*UP*(5BU)P*CP*GP*AP*AP*AP*AP*AP*GP*UP*C)-3') ; 4854.810 1 ? ? ? ? 2 non-polymer syn 'STRONTIUM ION' 87.620 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'CGCU(5BU)CGAAAAAGUC' _entity_poly.pdbx_seq_one_letter_code_can CGCUUCGAAAAAGUC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'STRONTIUM ION' _pdbx_entity_nonpoly.comp_id SR # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 C n 1 4 U n 1 5 5BU n 1 6 C n 1 7 G n 1 8 A n 1 9 A n 1 10 A n 1 11 A n 1 12 A n 1 13 G n 1 14 U n 1 15 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 15 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5BU 'RNA linking' n "5-BROMO-URIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O9 P' 403.077 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 SR non-polymer . 'STRONTIUM ION' ? 'Sr 2' 87.620 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 5 5 C C A . n A 1 2 G 2 6 6 G G A . n A 1 3 C 3 7 7 C C A . n A 1 4 U 4 8 8 U U A . n A 1 5 5BU 5 9 9 5BU 5BU A . n A 1 6 C 6 10 10 C C A . n A 1 7 G 7 11 11 G G A . n A 1 8 A 8 12 12 A A A . n A 1 9 A 9 13 13 A A A . n A 1 10 A 10 14 14 A A A . n A 1 11 A 11 15 15 A A A . n A 1 12 A 12 16 16 A A A . n A 1 13 G 13 17 17 G G A . n A 1 14 U 14 18 18 U U A . n A 1 15 C 15 19 19 C C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SR 1 101 50 SR SR A . C 2 SR 1 102 51 SR SR A . D 2 SR 1 103 52 SR SR A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.3_1479 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? CrystalClear ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5XWG _cell.details ? _cell.formula_units_Z ? _cell.length_a 80.544 _cell.length_a_esd ? _cell.length_b 80.544 _cell.length_b_esd ? _cell.length_c 80.544 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XWG _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5XWG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.48 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 72.57 _exptl_crystal.description 'The entry contains friedel pairs in F_plus/minus columns and I_plus/minus columns' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium cacodylate, spermine tetrahydrochloride, 2-methyl-2,4-pentanediol, strontium chloride' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-10-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91972 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91972 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 101.310 _reflns.entry_id 5XWG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.002 _reflns.d_resolution_low 56.953 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 3373 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.1 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 19.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.1 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.337 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11.4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 154.060 _refine.B_iso_mean 90.5200 _refine.B_iso_min 60.700 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'The entry contains friedel pairs in F_plus/minus columns and I_plus/minus columns' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5XWG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.0020 _refine.ls_d_res_low 21.5260 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 3364 _refine.ls_number_reflns_R_free 305 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.5300 _refine.ls_percent_reflns_R_free 9.0700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2177 _refine.ls_R_factor_R_free 0.2255 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2170 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.8900 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 3.0020 _refine_hist.d_res_low 21.5260 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 323 _refine_hist.pdbx_number_residues_total 15 _refine_hist.pdbx_B_iso_mean_ligand 133.35 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 320 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.014 ? 379 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.439 ? 588 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.163 ? 79 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.025 ? 16 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 9.368 ? 183 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.0017 3.7785 1671 . 124 1547 100.0000 . . . 0.2132 0.0000 0.2259 . . . . . . 2 . . . 'X-RAY DIFFRACTION' 3.7785 21.5269 1693 . 181 1512 99.0000 . . . 0.2281 0.0000 0.2145 . . . . . . 2 . . . # _struct.entry_id 5XWG _struct.title 'Crystal structure of a novel RNA motif that allows for precise positioning of a metal ion' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5XWG _struct_keywords.text 'RNA, metal-ion-binding motif, X-ray analysis' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5XWG _struct_ref.pdbx_db_accession 5XWG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5XWG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 15 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5XWG _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 19 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 19 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3710 ? 1 MORE -136 ? 1 'SSA (A^2)' 5440 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 14_445 -x-1,-y-1/2,z -1.0000000000 0.0000000000 0.0000000000 -80.5440000000 0.0000000000 -1.0000000000 0.0000000000 -40.2720000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A U 4 "O3'" ? ? ? 1_555 A 5BU 5 P ? ? A U 8 A 5BU 9 1_555 ? ? ? ? ? ? ? 1.614 ? ? covale2 covale both ? A 5BU 5 "O3'" ? ? ? 1_555 A C 6 P ? ? A 5BU 9 A C 10 1_555 ? ? ? ? ? ? ? 1.605 ? ? metalc1 metalc ? ? A C 15 "O3'" ? ? ? 1_555 B SR . SR ? ? A C 19 A SR 101 1_555 ? ? ? ? ? ? ? 2.952 ? ? metalc2 metalc ? ? A C 15 "O2'" ? ? ? 1_555 B SR . SR ? ? A C 19 A SR 101 1_555 ? ? ? ? ? ? ? 2.541 ? ? hydrog1 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 14 O2 ? ? A G 6 A U 18 14_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog2 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 14 N3 ? ? A G 6 A U 18 14_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 7 A G 17 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 7 A G 17 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 7 A G 17 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 12 N1 ? ? A U 8 A A 16 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 12 N6 ? ? A U 8 A A 16 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A 5BU 5 N3 ? ? ? 1_555 A A 11 N1 ? ? A 5BU 9 A A 15 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A 5BU 5 O4 ? ? ? 1_555 A A 11 N6 ? ? A 5BU 9 A A 15 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 6 N3 ? ? ? 1_555 A A 10 N6 ? ? A C 10 A A 14 14_445 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 9 N7 ? ? A G 11 A A 13 14_445 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog12 hydrog ? ? A G 7 N3 ? ? ? 1_555 A A 9 N6 ? ? A G 11 A A 13 14_445 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog13 hydrog ? ? A A 8 N7 ? ? ? 1_555 A G 7 N2 ? ? A A 12 A G 11 14_445 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog14 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 7 N3 ? ? A A 13 A G 11 14_445 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog15 hydrog ? ? A A 9 N7 ? ? ? 1_555 A G 7 N2 ? ? A A 13 A G 11 14_445 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog16 hydrog ? ? A A 10 N6 ? ? ? 1_555 A C 6 N3 ? ? A A 14 A C 10 14_445 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog17 hydrog ? ? A A 11 N1 ? ? ? 1_555 A 5BU 5 N3 ? ? A A 15 A 5BU 9 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A A 11 N6 ? ? ? 1_555 A 5BU 5 O4 ? ? A A 15 A 5BU 9 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A A 12 N1 ? ? ? 1_555 A U 4 N3 ? ? A A 16 A U 8 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A A 12 N6 ? ? ? 1_555 A U 4 O4 ? ? A A 16 A U 8 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 3 N3 ? ? A G 17 A C 7 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 3 O2 ? ? A G 17 A C 7 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 3 N4 ? ? A G 17 A C 7 14_445 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 14 N3 ? ? ? 1_555 A G 2 O6 ? ? A U 18 A G 6 14_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A U 14 O2 ? ? ? 1_555 A G 2 N1 ? ? A U 18 A G 6 14_445 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id "O3'" _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id C _pdbx_struct_conn_angle.ptnr1_label_seq_id 15 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id C _pdbx_struct_conn_angle.ptnr1_auth_seq_id 19 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id SR _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id B _pdbx_struct_conn_angle.ptnr2_label_comp_id SR _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id SR _pdbx_struct_conn_angle.ptnr2_auth_seq_id 101 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id "O2'" _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id A _pdbx_struct_conn_angle.ptnr3_label_comp_id C _pdbx_struct_conn_angle.ptnr3_label_seq_id 15 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id C _pdbx_struct_conn_angle.ptnr3_auth_seq_id 19 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 63.4 _pdbx_struct_conn_angle.value_esd ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SR _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'binding site for residue SR A 101' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id C _struct_site_gen.label_asym_id A _struct_site_gen.label_seq_id 15 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id C _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 19 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A C 5 ? A C 1 2 1 A SR 102 ? C SR . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5BU P P N N 1 5BU OP1 O N N 2 5BU OP2 O N N 3 5BU OP3 O N N 4 5BU "O5'" O N N 5 5BU "C5'" C N N 6 5BU "C4'" C N R 7 5BU "O4'" O N N 8 5BU "C3'" C N S 9 5BU "O3'" O N N 10 5BU "C2'" C N R 11 5BU "O2'" O N N 12 5BU "C1'" C N R 13 5BU N1 N N N 14 5BU C2 C N N 15 5BU O2 O N N 16 5BU N3 N N N 17 5BU C4 C N N 18 5BU O4 O N N 19 5BU C5 C N N 20 5BU C6 C N N 21 5BU BR BR N N 22 5BU HOP2 H N N 23 5BU HOP3 H N N 24 5BU "H5'" H N N 25 5BU "H5''" H N N 26 5BU "H4'" H N N 27 5BU "H3'" H N N 28 5BU "HO3'" H N N 29 5BU "H2'" H N N 30 5BU "HO2'" H N N 31 5BU "H1'" H N N 32 5BU H3 H N N 33 5BU H6 H N N 34 A OP3 O N N 35 A P P N N 36 A OP1 O N N 37 A OP2 O N N 38 A "O5'" O N N 39 A "C5'" C N N 40 A "C4'" C N R 41 A "O4'" O N N 42 A "C3'" C N S 43 A "O3'" O N N 44 A "C2'" C N R 45 A "O2'" O N N 46 A "C1'" C N R 47 A N9 N Y N 48 A C8 C Y N 49 A N7 N Y N 50 A C5 C Y N 51 A C6 C Y N 52 A N6 N N N 53 A N1 N Y N 54 A C2 C Y N 55 A N3 N Y N 56 A C4 C Y N 57 A HOP3 H N N 58 A HOP2 H N N 59 A "H5'" H N N 60 A "H5''" H N N 61 A "H4'" H N N 62 A "H3'" H N N 63 A "HO3'" H N N 64 A "H2'" H N N 65 A "HO2'" H N N 66 A "H1'" H N N 67 A H8 H N N 68 A H61 H N N 69 A H62 H N N 70 A H2 H N N 71 C OP3 O N N 72 C P P N N 73 C OP1 O N N 74 C OP2 O N N 75 C "O5'" O N N 76 C "C5'" C N N 77 C "C4'" C N R 78 C "O4'" O N N 79 C "C3'" C N S 80 C "O3'" O N N 81 C "C2'" C N R 82 C "O2'" O N N 83 C "C1'" C N R 84 C N1 N N N 85 C C2 C N N 86 C O2 O N N 87 C N3 N N N 88 C C4 C N N 89 C N4 N N N 90 C C5 C N N 91 C C6 C N N 92 C HOP3 H N N 93 C HOP2 H N N 94 C "H5'" H N N 95 C "H5''" H N N 96 C "H4'" H N N 97 C "H3'" H N N 98 C "HO3'" H N N 99 C "H2'" H N N 100 C "HO2'" H N N 101 C "H1'" H N N 102 C H41 H N N 103 C H42 H N N 104 C H5 H N N 105 C H6 H N N 106 G OP3 O N N 107 G P P N N 108 G OP1 O N N 109 G OP2 O N N 110 G "O5'" O N N 111 G "C5'" C N N 112 G "C4'" C N R 113 G "O4'" O N N 114 G "C3'" C N S 115 G "O3'" O N N 116 G "C2'" C N R 117 G "O2'" O N N 118 G "C1'" C N R 119 G N9 N Y N 120 G C8 C Y N 121 G N7 N Y N 122 G C5 C Y N 123 G C6 C N N 124 G O6 O N N 125 G N1 N N N 126 G C2 C N N 127 G N2 N N N 128 G N3 N N N 129 G C4 C Y N 130 G HOP3 H N N 131 G HOP2 H N N 132 G "H5'" H N N 133 G "H5''" H N N 134 G "H4'" H N N 135 G "H3'" H N N 136 G "HO3'" H N N 137 G "H2'" H N N 138 G "HO2'" H N N 139 G "H1'" H N N 140 G H8 H N N 141 G H1 H N N 142 G H21 H N N 143 G H22 H N N 144 SR SR SR N N 145 U OP3 O N N 146 U P P N N 147 U OP1 O N N 148 U OP2 O N N 149 U "O5'" O N N 150 U "C5'" C N N 151 U "C4'" C N R 152 U "O4'" O N N 153 U "C3'" C N S 154 U "O3'" O N N 155 U "C2'" C N R 156 U "O2'" O N N 157 U "C1'" C N R 158 U N1 N N N 159 U C2 C N N 160 U O2 O N N 161 U N3 N N N 162 U C4 C N N 163 U O4 O N N 164 U C5 C N N 165 U C6 C N N 166 U HOP3 H N N 167 U HOP2 H N N 168 U "H5'" H N N 169 U "H5''" H N N 170 U "H4'" H N N 171 U "H3'" H N N 172 U "HO3'" H N N 173 U "H2'" H N N 174 U "HO2'" H N N 175 U "H1'" H N N 176 U H3 H N N 177 U H5 H N N 178 U H6 H N N 179 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5BU P OP1 doub N N 1 5BU P OP2 sing N N 2 5BU P OP3 sing N N 3 5BU P "O5'" sing N N 4 5BU OP2 HOP2 sing N N 5 5BU OP3 HOP3 sing N N 6 5BU "O5'" "C5'" sing N N 7 5BU "C5'" "C4'" sing N N 8 5BU "C5'" "H5'" sing N N 9 5BU "C5'" "H5''" sing N N 10 5BU "C4'" "O4'" sing N N 11 5BU "C4'" "C3'" sing N N 12 5BU "C4'" "H4'" sing N N 13 5BU "O4'" "C1'" sing N N 14 5BU "C3'" "O3'" sing N N 15 5BU "C3'" "C2'" sing N N 16 5BU "C3'" "H3'" sing N N 17 5BU "O3'" "HO3'" sing N N 18 5BU "C2'" "O2'" sing N N 19 5BU "C2'" "C1'" sing N N 20 5BU "C2'" "H2'" sing N N 21 5BU "O2'" "HO2'" sing N N 22 5BU "C1'" N1 sing N N 23 5BU "C1'" "H1'" sing N N 24 5BU N1 C2 sing N N 25 5BU N1 C6 sing N N 26 5BU C2 O2 doub N N 27 5BU C2 N3 sing N N 28 5BU N3 C4 sing N N 29 5BU N3 H3 sing N N 30 5BU C4 O4 doub N N 31 5BU C4 C5 sing N N 32 5BU C5 C6 doub N N 33 5BU C5 BR sing N N 34 5BU C6 H6 sing N N 35 A OP3 P sing N N 36 A OP3 HOP3 sing N N 37 A P OP1 doub N N 38 A P OP2 sing N N 39 A P "O5'" sing N N 40 A OP2 HOP2 sing N N 41 A "O5'" "C5'" sing N N 42 A "C5'" "C4'" sing N N 43 A "C5'" "H5'" sing N N 44 A "C5'" "H5''" sing N N 45 A "C4'" "O4'" sing N N 46 A "C4'" "C3'" sing N N 47 A "C4'" "H4'" sing N N 48 A "O4'" "C1'" sing N N 49 A "C3'" "O3'" sing N N 50 A "C3'" "C2'" sing N N 51 A "C3'" "H3'" sing N N 52 A "O3'" "HO3'" sing N N 53 A "C2'" "O2'" sing N N 54 A "C2'" "C1'" sing N N 55 A "C2'" "H2'" sing N N 56 A "O2'" "HO2'" sing N N 57 A "C1'" N9 sing N N 58 A "C1'" "H1'" sing N N 59 A N9 C8 sing Y N 60 A N9 C4 sing Y N 61 A C8 N7 doub Y N 62 A C8 H8 sing N N 63 A N7 C5 sing Y N 64 A C5 C6 sing Y N 65 A C5 C4 doub Y N 66 A C6 N6 sing N N 67 A C6 N1 doub Y N 68 A N6 H61 sing N N 69 A N6 H62 sing N N 70 A N1 C2 sing Y N 71 A C2 N3 doub Y N 72 A C2 H2 sing N N 73 A N3 C4 sing Y N 74 C OP3 P sing N N 75 C OP3 HOP3 sing N N 76 C P OP1 doub N N 77 C P OP2 sing N N 78 C P "O5'" sing N N 79 C OP2 HOP2 sing N N 80 C "O5'" "C5'" sing N N 81 C "C5'" "C4'" sing N N 82 C "C5'" "H5'" sing N N 83 C "C5'" "H5''" sing N N 84 C "C4'" "O4'" sing N N 85 C "C4'" "C3'" sing N N 86 C "C4'" "H4'" sing N N 87 C "O4'" "C1'" sing N N 88 C "C3'" "O3'" sing N N 89 C "C3'" "C2'" sing N N 90 C "C3'" "H3'" sing N N 91 C "O3'" "HO3'" sing N N 92 C "C2'" "O2'" sing N N 93 C "C2'" "C1'" sing N N 94 C "C2'" "H2'" sing N N 95 C "O2'" "HO2'" sing N N 96 C "C1'" N1 sing N N 97 C "C1'" "H1'" sing N N 98 C N1 C2 sing N N 99 C N1 C6 sing N N 100 C C2 O2 doub N N 101 C C2 N3 sing N N 102 C N3 C4 doub N N 103 C C4 N4 sing N N 104 C C4 C5 sing N N 105 C N4 H41 sing N N 106 C N4 H42 sing N N 107 C C5 C6 doub N N 108 C C5 H5 sing N N 109 C C6 H6 sing N N 110 G OP3 P sing N N 111 G OP3 HOP3 sing N N 112 G P OP1 doub N N 113 G P OP2 sing N N 114 G P "O5'" sing N N 115 G OP2 HOP2 sing N N 116 G "O5'" "C5'" sing N N 117 G "C5'" "C4'" sing N N 118 G "C5'" "H5'" sing N N 119 G "C5'" "H5''" sing N N 120 G "C4'" "O4'" sing N N 121 G "C4'" "C3'" sing N N 122 G "C4'" "H4'" sing N N 123 G "O4'" "C1'" sing N N 124 G "C3'" "O3'" sing N N 125 G "C3'" "C2'" sing N N 126 G "C3'" "H3'" sing N N 127 G "O3'" "HO3'" sing N N 128 G "C2'" "O2'" sing N N 129 G "C2'" "C1'" sing N N 130 G "C2'" "H2'" sing N N 131 G "O2'" "HO2'" sing N N 132 G "C1'" N9 sing N N 133 G "C1'" "H1'" sing N N 134 G N9 C8 sing Y N 135 G N9 C4 sing Y N 136 G C8 N7 doub Y N 137 G C8 H8 sing N N 138 G N7 C5 sing Y N 139 G C5 C6 sing N N 140 G C5 C4 doub Y N 141 G C6 O6 doub N N 142 G C6 N1 sing N N 143 G N1 C2 sing N N 144 G N1 H1 sing N N 145 G C2 N2 sing N N 146 G C2 N3 doub N N 147 G N2 H21 sing N N 148 G N2 H22 sing N N 149 G N3 C4 sing N N 150 U OP3 P sing N N 151 U OP3 HOP3 sing N N 152 U P OP1 doub N N 153 U P OP2 sing N N 154 U P "O5'" sing N N 155 U OP2 HOP2 sing N N 156 U "O5'" "C5'" sing N N 157 U "C5'" "C4'" sing N N 158 U "C5'" "H5'" sing N N 159 U "C5'" "H5''" sing N N 160 U "C4'" "O4'" sing N N 161 U "C4'" "C3'" sing N N 162 U "C4'" "H4'" sing N N 163 U "O4'" "C1'" sing N N 164 U "C3'" "O3'" sing N N 165 U "C3'" "C2'" sing N N 166 U "C3'" "H3'" sing N N 167 U "O3'" "HO3'" sing N N 168 U "C2'" "O2'" sing N N 169 U "C2'" "C1'" sing N N 170 U "C2'" "H2'" sing N N 171 U "O2'" "HO2'" sing N N 172 U "C1'" N1 sing N N 173 U "C1'" "H1'" sing N N 174 U N1 C2 sing N N 175 U N1 C6 sing N N 176 U C2 O2 doub N N 177 U C2 N3 sing N N 178 U N3 C4 sing N N 179 U N3 H3 sing N N 180 U C4 O4 doub N N 181 U C4 C5 sing N N 182 U C5 C6 doub N N 183 U C5 H5 sing N N 184 U C6 H6 sing N N 185 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5XWG 'a-form double helix' 5XWG 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 2 1_555 A U 14 14_445 -2.472 -0.780 0.165 9.136 -7.678 -3.081 1 A_G6:U18_A A 6 ? A 18 ? 28 1 1 A C 3 1_555 A G 13 14_445 -0.227 -0.219 -0.058 7.232 -11.520 -6.160 2 A_C7:G17_A A 7 ? A 17 ? 19 1 1 A U 4 1_555 A A 12 14_445 0.041 -0.495 0.127 2.947 -7.786 -0.205 3 A_U8:A16_A A 8 ? A 16 ? 20 1 1 A 5BU 5 1_555 A A 11 14_445 -0.301 -0.165 0.102 0.962 -3.572 -1.588 4 A_5BU9:A15_A A 9 ? A 15 ? 20 1 1 A C 6 1_555 A A 10 14_445 2.437 -0.490 0.037 8.442 -1.463 2.663 5 A_C10:A14_A A 10 ? A 14 ? ? 1 1 A G 7 1_555 A A 9 14_445 7.069 -4.693 1.128 15.527 -14.714 3.323 6 A_G11:A13_A A 11 ? A 13 ? 11 9 1 A G 2 14_445 A U 14 1_555 -2.472 -0.780 0.165 9.136 -7.678 -3.081 7 A_G6:U18_A A 6 ? A 18 ? 28 1 1 A C 3 14_445 A G 13 1_555 -0.227 -0.219 -0.058 7.232 -11.520 -6.160 8 A_C7:G17_A A 7 ? A 17 ? 19 1 1 A U 4 14_445 A A 12 1_555 0.041 -0.495 0.127 2.947 -7.786 -0.205 9 A_U8:A16_A A 8 ? A 16 ? 20 1 1 A 5BU 5 14_445 A A 11 1_555 -0.301 -0.165 0.102 0.962 -3.572 -1.588 10 A_5BU9:A15_A A 9 ? A 15 ? 20 1 1 A C 6 14_445 A A 10 1_555 2.437 -0.490 0.037 8.442 -1.463 2.663 11 A_C10:A14_A A 10 ? A 14 ? ? 1 1 A G 7 14_445 A A 9 1_555 7.069 -4.693 1.128 15.527 -14.714 3.323 12 A_G11:A13_A A 11 ? A 13 ? 11 9 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 2 1_555 A U 14 14_445 A C 3 1_555 A G 13 14_445 -0.558 -1.226 3.199 -2.942 3.515 43.394 -1.977 0.478 3.125 4.738 3.966 43.623 1 AA_G6C7:G17U18_AA A 6 ? A 18 ? A 7 ? A 17 ? 1 A C 3 1_555 A G 13 14_445 A U 4 1_555 A A 12 14_445 1.031 -2.496 3.208 0.367 7.418 29.187 -6.158 -1.918 2.524 14.429 -0.714 30.097 2 AA_C7U8:A16G17_AA A 7 ? A 17 ? A 8 ? A 16 ? 1 A U 4 1_555 A A 12 14_445 A 5BU 5 1_555 A A 11 14_445 -0.715 -2.313 3.186 -0.785 7.236 30.701 -5.465 1.185 2.603 13.431 1.457 31.532 3 AA_U85BU9:A15A16_AA A 8 ? A 16 ? A 9 ? A 15 ? 1 A 5BU 5 1_555 A A 11 14_445 A C 6 1_555 A A 10 14_445 0.137 -1.178 3.149 3.813 5.386 40.720 -2.221 0.193 2.977 7.679 -5.437 41.229 4 AA_5BU9C10:A14A15_AA A 9 ? A 15 ? A 10 ? A 14 ? 1 A C 6 1_555 A A 10 14_445 A G 7 1_555 A A 9 14_445 0.662 -0.560 3.367 7.860 11.054 52.775 -1.306 -0.231 3.258 12.208 -8.681 54.369 5 AA_C10G11:A13A14_AA A 10 ? A 14 ? A 11 ? A 13 ? 1 A G 2 14_445 A U 14 1_555 A C 3 14_445 A G 13 1_555 -0.558 -1.226 3.199 -2.942 3.515 43.394 -1.977 0.478 3.125 4.738 3.966 43.623 6 AA_G6C7:G17U18_AA A 6 ? A 18 ? A 7 ? A 17 ? 1 A C 3 14_445 A G 13 1_555 A U 4 14_445 A A 12 1_555 1.031 -2.496 3.208 0.367 7.418 29.187 -6.158 -1.918 2.524 14.429 -0.714 30.097 7 AA_C7U8:A16G17_AA A 7 ? A 17 ? A 8 ? A 16 ? 1 A U 4 14_445 A A 12 1_555 A 5BU 5 14_445 A A 11 1_555 -0.715 -2.313 3.186 -0.785 7.236 30.701 -5.465 1.185 2.603 13.431 1.457 31.532 8 AA_U85BU9:A15A16_AA A 8 ? A 16 ? A 9 ? A 15 ? 1 A 5BU 5 14_445 A A 11 1_555 A C 6 14_445 A A 10 1_555 0.137 -1.178 3.149 3.813 5.386 40.720 -2.221 0.193 2.977 7.679 -5.437 41.229 9 AA_5BU9C10:A14A15_AA A 9 ? A 15 ? A 10 ? A 14 ? 1 A C 6 14_445 A A 10 1_555 A G 7 14_445 A A 9 1_555 0.662 -0.560 3.367 7.860 11.054 52.775 -1.306 -0.231 3.258 12.208 -8.681 54.369 10 AA_C10G11:A13A14_AA A 10 ? A 14 ? A 11 ? A 13 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'the Ichiro Kanehara Foundation' Japan ? 1 AMED Japan ? 2 'the Japan Science Society' Japan ? 3 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id SR _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id SR _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _atom_sites.entry_id 5XWG _atom_sites.fract_transf_matrix[1][1] 0.012416 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012416 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C N O P SR # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 P P A C A 1 1 ? -42.901 -36.930 13.088 0.50 109.95 ? 5 C A P 1 ATOM 2 P P B C A 1 1 ? -44.732 -36.672 11.429 0.50 121.72 ? 5 C A P 1 ATOM 3 O OP1 A C A 1 1 ? -43.243 -37.597 11.759 0.50 111.40 ? 5 C A OP1 1 ATOM 4 O OP1 B C A 1 1 ? -45.564 -37.439 10.405 0.50 114.58 ? 5 C A OP1 1 ATOM 5 O OP2 A C A 1 1 ? -42.993 -35.411 12.998 0.50 108.79 ? 5 C A OP2 1 ATOM 6 O OP2 B C A 1 1 ? -45.020 -35.176 11.384 0.50 116.31 ? 5 C A OP2 1 ATOM 7 O "O5'" A C A 1 1 ? -44.042 -37.390 14.167 0.50 104.36 ? 5 C A "O5'" 1 ATOM 8 O "O5'" B C A 1 1 ? -45.202 -37.181 12.911 0.50 105.06 ? 5 C A "O5'" 1 ATOM 9 C "C5'" A C A 1 1 ? -45.436 -37.094 13.938 0.50 98.59 ? 5 C A "C5'" 1 ATOM 10 C "C5'" B C A 1 1 ? -46.571 -37.032 13.342 0.50 100.72 ? 5 C A "C5'" 1 ATOM 11 C "C4'" A C A 1 1 ? -46.302 -37.697 15.026 0.50 96.21 ? 5 C A "C4'" 1 ATOM 12 C "C4'" B C A 1 1 ? -46.778 -37.656 14.708 0.50 96.50 ? 5 C A "C4'" 1 ATOM 13 O "O4'" A C A 1 1 ? -45.773 -38.985 15.440 0.50 96.63 ? 5 C A "O4'" 1 ATOM 14 O "O4'" B C A 1 1 ? -45.982 -38.863 14.841 0.50 97.88 ? 5 C A "O4'" 1 ATOM 15 C "C3'" A C A 1 1 ? -46.424 -36.956 16.349 0.50 93.84 ? 5 C A "C3'" 1 ATOM 16 C "C3'" B C A 1 1 ? -46.368 -36.859 15.938 0.50 94.46 ? 5 C A "C3'" 1 ATOM 17 O "O3'" . C A 1 1 ? -47.315 -35.840 16.268 1.00 93.20 ? 5 C A "O3'" 1 ATOM 18 C "C2'" A C A 1 1 ? -47.006 -38.048 17.234 0.50 91.72 ? 5 C A "C2'" 1 ATOM 19 C "C2'" B C A 1 1 ? -46.362 -37.954 16.996 0.50 91.41 ? 5 C A "C2'" 1 ATOM 20 O "O2'" A C A 1 1 ? -48.389 -38.229 17.006 0.50 91.18 ? 5 C A "O2'" 1 ATOM 21 O "O2'" B C A 1 1 ? -47.669 -38.278 17.425 0.50 91.97 ? 5 C A "O2'" 1 ATOM 22 C "C1'" A C A 1 1 ? -46.237 -39.281 16.748 0.50 90.77 ? 5 C A "C1'" 1 ATOM 23 C "C1'" B C A 1 1 ? -45.766 -39.132 16.218 0.50 92.73 ? 5 C A "C1'" 1 ATOM 24 N N1 A C A 1 1 ? -45.077 -39.609 17.594 0.50 85.26 ? 5 C A N1 1 ATOM 25 N N1 B C A 1 1 ? -44.321 -39.301 16.442 0.50 85.26 ? 5 C A N1 1 ATOM 26 C C2 A C A 1 1 ? -45.295 -39.943 18.943 0.50 86.19 ? 5 C A C2 1 ATOM 27 C C2 B C A 1 1 ? -43.866 -39.581 17.744 0.50 83.85 ? 5 C A C2 1 ATOM 28 O O2 A C A 1 1 ? -46.463 -40.020 19.369 0.50 85.84 ? 5 C A O2 1 ATOM 29 O O2 B C A 1 1 ? -44.698 -39.746 18.656 0.50 85.78 ? 5 C A O2 1 ATOM 30 N N3 A C A 1 1 ? -44.228 -40.174 19.747 0.50 83.61 ? 5 C A N3 1 ATOM 31 N N3 B C A 1 1 ? -42.533 -39.666 17.973 0.50 85.10 ? 5 C A N3 1 ATOM 32 C C4 A C A 1 1 ? -42.988 -40.089 19.251 0.50 79.73 ? 5 C A C4 1 ATOM 33 C C4 B C A 1 1 ? -41.670 -39.490 16.966 0.50 82.07 ? 5 C A C4 1 ATOM 34 N N4 A C A 1 1 ? -41.965 -40.266 20.094 0.50 78.76 ? 5 C A N4 1 ATOM 35 N N4 B C A 1 1 ? -40.363 -39.522 17.249 0.50 78.64 ? 5 C A N4 1 ATOM 36 C C5 A C A 1 1 ? -42.742 -39.805 17.871 0.50 82.56 ? 5 C A C5 1 ATOM 37 C C5 B C A 1 1 ? -42.109 -39.258 15.624 0.50 83.88 ? 5 C A C5 1 ATOM 38 C C6 A C A 1 1 ? -43.806 -39.571 17.088 0.50 84.11 ? 5 C A C6 1 ATOM 39 C C6 B C A 1 1 ? -43.430 -39.169 15.412 0.50 85.17 ? 5 C A C6 1 ATOM 40 P P . G A 1 2 ? -47.055 -34.626 17.214 1.00 95.29 ? 6 G A P 1 ATOM 41 O OP1 . G A 1 2 ? -48.130 -33.571 17.087 1.00 106.05 ? 6 G A OP1 1 ATOM 42 O OP2 . G A 1 2 ? -45.639 -34.080 17.106 1.00 88.78 ? 6 G A OP2 1 ATOM 43 O "O5'" . G A 1 2 ? -47.143 -35.150 18.753 1.00 91.36 ? 6 G A "O5'" 1 ATOM 44 C "C5'" . G A 1 2 ? -48.413 -35.428 19.372 1.00 92.87 ? 6 G A "C5'" 1 ATOM 45 C "C4'" . G A 1 2 ? -48.196 -35.917 20.778 1.00 86.93 ? 6 G A "C4'" 1 ATOM 46 O "O4'" . G A 1 2 ? -47.302 -37.053 20.726 1.00 83.23 ? 6 G A "O4'" 1 ATOM 47 C "C3'" . G A 1 2 ? -47.478 -34.930 21.680 1.00 91.69 ? 6 G A "C3'" 1 ATOM 48 O "O3'" . G A 1 2 ? -48.411 -34.012 22.236 1.00 94.16 ? 6 G A "O3'" 1 ATOM 49 C "C2'" . G A 1 2 ? -46.846 -35.845 22.726 1.00 91.69 ? 6 G A "C2'" 1 ATOM 50 O "O2'" . G A 1 2 ? -47.696 -36.188 23.802 1.00 86.81 ? 6 G A "O2'" 1 ATOM 51 C "C1'" . G A 1 2 ? -46.514 -37.091 21.897 1.00 85.40 ? 6 G A "C1'" 1 ATOM 52 N N9 . G A 1 2 ? -45.113 -37.161 21.500 1.00 77.63 ? 6 G A N9 1 ATOM 53 C C8 . G A 1 2 ? -44.600 -37.038 20.234 1.00 81.06 ? 6 G A C8 1 ATOM 54 N N7 . G A 1 2 ? -43.295 -37.119 20.203 1.00 79.33 ? 6 G A N7 1 ATOM 55 C C5 . G A 1 2 ? -42.930 -37.322 21.527 1.00 74.22 ? 6 G A C5 1 ATOM 56 C C6 . G A 1 2 ? -41.640 -37.481 22.115 1.00 75.14 ? 6 G A C6 1 ATOM 57 O O6 . G A 1 2 ? -40.531 -37.517 21.552 1.00 72.27 ? 6 G A O6 1 ATOM 58 N N1 . G A 1 2 ? -41.720 -37.616 23.497 1.00 71.62 ? 6 G A N1 1 ATOM 59 C C2 . G A 1 2 ? -42.895 -37.620 24.218 1.00 80.16 ? 6 G A C2 1 ATOM 60 N N2 . G A 1 2 ? -42.777 -37.736 25.556 1.00 88.19 ? 6 G A N2 1 ATOM 61 N N3 . G A 1 2 ? -44.105 -37.508 23.674 1.00 81.09 ? 6 G A N3 1 ATOM 62 C C4 . G A 1 2 ? -44.042 -37.353 22.338 1.00 76.66 ? 6 G A C4 1 ATOM 63 P P . C A 1 3 ? -48.015 -32.456 22.375 1.00 92.17 ? 7 C A P 1 ATOM 64 O OP1 . C A 1 3 ? -49.273 -31.690 22.617 1.00 89.78 ? 7 C A OP1 1 ATOM 65 O OP2 . C A 1 3 ? -47.117 -32.073 21.249 1.00 86.82 ? 7 C A OP2 1 ATOM 66 O "O5'" . C A 1 3 ? -47.118 -32.408 23.686 1.00 93.81 ? 7 C A "O5'" 1 ATOM 67 C "C5'" . C A 1 3 ? -47.617 -32.871 24.933 1.00 93.65 ? 7 C A "C5'" 1 ATOM 68 C "C4'" . C A 1 3 ? -46.470 -33.164 25.862 1.00 84.27 ? 7 C A "C4'" 1 ATOM 69 O "O4'" . C A 1 3 ? -45.772 -34.359 25.418 1.00 82.28 ? 7 C A "O4'" 1 ATOM 70 C "C3'" . C A 1 3 ? -45.356 -32.125 25.883 1.00 79.46 ? 7 C A "C3'" 1 ATOM 71 O "O3'" . C A 1 3 ? -45.685 -30.964 26.638 1.00 75.93 ? 7 C A "O3'" 1 ATOM 72 C "C2'" . C A 1 3 ? -44.244 -32.930 26.526 1.00 74.79 ? 7 C A "C2'" 1 ATOM 73 O "O2'" . C A 1 3 ? -44.519 -33.156 27.892 1.00 103.25 ? 7 C A "O2'" 1 ATOM 74 C "C1'" . C A 1 3 ? -44.395 -34.252 25.773 1.00 81.11 ? 7 C A "C1'" 1 ATOM 75 N N1 . C A 1 3 ? -43.585 -34.276 24.549 1.00 71.37 ? 7 C A N1 1 ATOM 76 C C2 . C A 1 3 ? -42.199 -34.395 24.672 1.00 76.32 ? 7 C A C2 1 ATOM 77 O O2 . C A 1 3 ? -41.710 -34.474 25.809 1.00 82.67 ? 7 C A O2 1 ATOM 78 N N3 . C A 1 3 ? -41.432 -34.418 23.554 1.00 77.31 ? 7 C A N3 1 ATOM 79 C C4 . C A 1 3 ? -42.010 -34.321 22.354 1.00 82.21 ? 7 C A C4 1 ATOM 80 N N4 . C A 1 3 ? -41.228 -34.342 21.280 1.00 76.10 ? 7 C A N4 1 ATOM 81 C C5 . C A 1 3 ? -43.422 -34.197 22.203 1.00 81.89 ? 7 C A C5 1 ATOM 82 C C6 . C A 1 3 ? -44.165 -34.182 23.315 1.00 78.84 ? 7 C A C6 1 ATOM 83 P P . U A 1 4 ? -45.379 -29.502 26.031 1.00 92.24 ? 8 U A P 1 ATOM 84 O OP1 . U A 1 4 ? -45.910 -28.532 27.019 1.00 104.04 ? 8 U A OP1 1 ATOM 85 O OP2 . U A 1 4 ? -45.857 -29.445 24.629 1.00 91.83 ? 8 U A OP2 1 ATOM 86 O "O5'" . U A 1 4 ? -43.787 -29.387 26.023 1.00 81.46 ? 8 U A "O5'" 1 ATOM 87 C "C5'" . U A 1 4 ? -43.064 -29.432 27.241 1.00 82.78 ? 8 U A "C5'" 1 ATOM 88 C "C4'" . U A 1 4 ? -41.593 -29.652 26.989 1.00 77.34 ? 8 U A "C4'" 1 ATOM 89 O "O4'" . U A 1 4 ? -41.376 -30.785 26.115 1.00 84.22 ? 8 U A "O4'" 1 ATOM 90 C "C3'" . U A 1 4 ? -40.811 -28.572 26.270 1.00 78.62 ? 8 U A "C3'" 1 ATOM 91 O "O3'" . U A 1 4 ? -40.597 -27.451 27.120 1.00 89.71 ? 8 U A "O3'" 1 ATOM 92 C "C2'" . U A 1 4 ? -39.515 -29.323 25.956 1.00 83.82 ? 8 U A "C2'" 1 ATOM 93 O "O2'" . U A 1 4 ? -38.623 -29.448 27.040 1.00 84.39 ? 8 U A "O2'" 1 ATOM 94 C "C1'" . U A 1 4 ? -40.047 -30.716 25.610 1.00 81.76 ? 8 U A "C1'" 1 ATOM 95 N N1 . U A 1 4 ? -40.064 -30.946 24.158 1.00 82.12 ? 8 U A N1 1 ATOM 96 C C2 . U A 1 4 ? -38.839 -31.069 23.535 1.00 86.67 ? 8 U A C2 1 ATOM 97 O O2 . U A 1 4 ? -37.783 -31.016 24.141 1.00 83.01 ? 8 U A O2 1 ATOM 98 N N3 . U A 1 4 ? -38.890 -31.259 22.168 1.00 80.90 ? 8 U A N3 1 ATOM 99 C C4 . U A 1 4 ? -40.022 -31.331 21.390 1.00 84.84 ? 8 U A C4 1 ATOM 100 O O4 . U A 1 4 ? -39.941 -31.504 20.169 1.00 88.12 ? 8 U A O4 1 ATOM 101 C C5 . U A 1 4 ? -41.255 -31.188 22.126 1.00 81.77 ? 8 U A C5 1 ATOM 102 C C6 . U A 1 4 ? -41.246 -31.008 23.462 1.00 72.92 ? 8 U A C6 1 HETATM 103 P P . 5BU A 1 5 ? -40.373 -25.985 26.484 1.00 101.54 ? 9 5BU A P 1 HETATM 104 O OP1 . 5BU A 1 5 ? -40.535 -25.025 27.608 1.00 101.92 ? 9 5BU A OP1 1 HETATM 105 O OP2 . 5BU A 1 5 ? -41.226 -25.834 25.274 1.00 97.23 ? 9 5BU A OP2 1 HETATM 106 O "O5'" . 5BU A 1 5 ? -38.842 -26.001 26.032 1.00 79.21 ? 9 5BU A "O5'" 1 HETATM 107 C "C5'" . 5BU A 1 5 ? -37.805 -26.129 26.991 1.00 78.82 ? 9 5BU A "C5'" 1 HETATM 108 C "C4'" . 5BU A 1 5 ? -36.463 -26.115 26.311 1.00 79.69 ? 9 5BU A "C4'" 1 HETATM 109 O "O4'" . 5BU A 1 5 ? -36.259 -27.339 25.563 1.00 96.52 ? 9 5BU A "O4'" 1 HETATM 110 C "C3'" . 5BU A 1 5 ? -36.257 -25.017 25.284 1.00 85.11 ? 9 5BU A "C3'" 1 HETATM 111 O "O3'" . 5BU A 1 5 ? -35.891 -23.818 25.942 1.00 92.52 ? 9 5BU A "O3'" 1 HETATM 112 C "C2'" . 5BU A 1 5 ? -35.103 -25.576 24.454 1.00 92.08 ? 9 5BU A "C2'" 1 HETATM 113 O "O2'" . 5BU A 1 5 ? -33.821 -25.331 24.992 1.00 97.04 ? 9 5BU A "O2'" 1 HETATM 114 C "C1'" . 5BU A 1 5 ? -35.422 -27.076 24.442 1.00 92.95 ? 9 5BU A "C1'" 1 HETATM 115 N N1 . 5BU A 1 5 ? -36.139 -27.480 23.221 1.00 94.44 ? 9 5BU A N1 1 HETATM 116 C C2 . 5BU A 1 5 ? -35.394 -27.686 22.077 1.00 96.55 ? 9 5BU A C2 1 HETATM 117 O O2 . 5BU A 1 5 ? -34.184 -27.555 22.045 1.00 100.35 ? 9 5BU A O2 1 HETATM 118 N N3 . 5BU A 1 5 ? -36.122 -28.042 20.970 1.00 93.47 ? 9 5BU A N3 1 HETATM 119 C C4 . 5BU A 1 5 ? -37.488 -28.202 20.898 1.00 92.85 ? 9 5BU A C4 1 HETATM 120 O O4 . 5BU A 1 5 ? -38.008 -28.521 19.834 1.00 96.92 ? 9 5BU A O4 1 HETATM 121 C C5 . 5BU A 1 5 ? -38.178 -27.973 22.116 1.00 84.78 ? 9 5BU A C5 1 HETATM 122 C C6 . 5BU A 1 5 ? -37.502 -27.633 23.211 1.00 86.45 ? 9 5BU A C6 1 HETATM 123 BR BR . 5BU A 1 5 ? -40.093 -27.997 22.135 1.00 146.52 ? 9 5BU A BR 1 ATOM 124 P P . C A 1 6 ? -36.271 -22.397 25.301 1.00 100.44 ? 10 C A P 1 ATOM 125 O OP1 . C A 1 6 ? -35.732 -21.400 26.256 1.00 97.70 ? 10 C A OP1 1 ATOM 126 O OP2 . C A 1 6 ? -37.712 -22.371 24.950 1.00 97.61 ? 10 C A OP2 1 ATOM 127 O "O5'" . C A 1 6 ? -35.392 -22.329 23.972 1.00 91.12 ? 10 C A "O5'" 1 ATOM 128 C "C5'" . C A 1 6 ? -33.975 -22.166 24.048 1.00 91.69 ? 10 C A "C5'" 1 ATOM 129 C "C4'" . C A 1 6 ? -33.349 -22.260 22.673 1.00 96.44 ? 10 C A "C4'" 1 ATOM 130 O "O4'" . C A 1 6 ? -33.493 -23.604 22.149 1.00 97.57 ? 10 C A "O4'" 1 ATOM 131 C "C3'" . C A 1 6 ? -33.924 -21.365 21.589 1.00 94.01 ? 10 C A "C3'" 1 ATOM 132 O "O3'" . C A 1 6 ? -33.322 -20.079 21.644 1.00 99.91 ? 10 C A "O3'" 1 ATOM 133 C "C2'" . C A 1 6 ? -33.491 -22.092 20.322 1.00 92.80 ? 10 C A "C2'" 1 ATOM 134 O "O2'" . C A 1 6 ? -32.166 -21.820 19.924 1.00 114.25 ? 10 C A "O2'" 1 ATOM 135 C "C1'" . C A 1 6 ? -33.633 -23.555 20.741 1.00 91.75 ? 10 C A "C1'" 1 ATOM 136 N N1 . C A 1 6 ? -34.956 -24.080 20.394 1.00 95.85 ? 10 C A N1 1 ATOM 137 C C2 . C A 1 6 ? -35.140 -24.669 19.135 1.00 97.91 ? 10 C A C2 1 ATOM 138 O O2 . C A 1 6 ? -34.175 -24.748 18.354 1.00 109.00 ? 10 C A O2 1 ATOM 139 N N3 . C A 1 6 ? -36.357 -25.122 18.797 1.00 93.70 ? 10 C A N3 1 ATOM 140 C C4 . C A 1 6 ? -37.375 -25.007 19.659 1.00 98.98 ? 10 C A C4 1 ATOM 141 N N4 . C A 1 6 ? -38.569 -25.448 19.282 1.00 100.86 ? 10 C A N4 1 ATOM 142 C C5 . C A 1 6 ? -37.212 -24.426 20.949 1.00 97.66 ? 10 C A C5 1 ATOM 143 C C6 . C A 1 6 ? -35.996 -23.983 21.272 1.00 98.22 ? 10 C A C6 1 ATOM 144 P P . G A 1 7 ? -34.219 -18.763 21.425 1.00 110.20 ? 11 G A P 1 ATOM 145 O OP1 . G A 1 7 ? -33.262 -17.623 21.482 1.00 116.66 ? 11 G A OP1 1 ATOM 146 O OP2 . G A 1 7 ? -35.399 -18.794 22.335 1.00 95.03 ? 11 G A OP2 1 ATOM 147 O "O5'" . G A 1 7 ? -34.759 -18.880 19.931 1.00 103.80 ? 11 G A "O5'" 1 ATOM 148 C "C5'" . G A 1 7 ? -33.864 -18.878 18.829 1.00 99.44 ? 11 G A "C5'" 1 ATOM 149 C "C4'" . G A 1 7 ? -34.604 -19.248 17.575 1.00 98.29 ? 11 G A "C4'" 1 ATOM 150 O "O4'" . G A 1 7 ? -35.135 -20.588 17.743 1.00 101.85 ? 11 G A "O4'" 1 ATOM 151 C "C3'" . G A 1 7 ? -35.821 -18.387 17.260 1.00 98.91 ? 11 G A "C3'" 1 ATOM 152 O "O3'" . G A 1 7 ? -35.432 -17.252 16.488 1.00 100.90 ? 11 G A "O3'" 1 ATOM 153 C "C2'" . G A 1 7 ? -36.681 -19.335 16.431 1.00 101.08 ? 11 G A "C2'" 1 ATOM 154 O "O2'" . G A 1 7 ? -36.361 -19.341 15.057 1.00 103.11 ? 11 G A "O2'" 1 ATOM 155 C "C1'" . G A 1 7 ? -36.386 -20.688 17.089 1.00 100.67 ? 11 G A "C1'" 1 ATOM 156 N N9 . G A 1 7 ? -37.379 -21.014 18.074 1.00 94.24 ? 11 G A N9 1 ATOM 157 C C8 . G A 1 7 ? -37.565 -20.467 19.323 1.00 101.68 ? 11 G A C8 1 ATOM 158 N N7 . G A 1 7 ? -38.660 -20.878 19.925 1.00 96.85 ? 11 G A N7 1 ATOM 159 C C5 . G A 1 7 ? -39.249 -21.760 19.026 1.00 94.47 ? 11 G A C5 1 ATOM 160 C C6 . G A 1 7 ? -40.457 -22.499 19.122 1.00 103.66 ? 11 G A C6 1 ATOM 161 O O6 . G A 1 7 ? -41.270 -22.527 20.061 1.00 113.04 ? 11 G A O6 1 ATOM 162 N N1 . G A 1 7 ? -40.695 -23.268 17.981 1.00 104.31 ? 11 G A N1 1 ATOM 163 C C2 . G A 1 7 ? -39.874 -23.312 16.885 1.00 109.47 ? 11 G A C2 1 ATOM 164 N N2 . G A 1 7 ? -40.250 -24.102 15.884 1.00 101.21 ? 11 G A N2 1 ATOM 165 N N3 . G A 1 7 ? -38.750 -22.622 16.780 1.00 106.67 ? 11 G A N3 1 ATOM 166 C C4 . G A 1 7 ? -38.482 -21.856 17.881 1.00 96.19 ? 11 G A C4 1 ATOM 167 P P . A A 1 8 ? -36.374 -15.943 16.433 1.00 105.67 ? 12 A A P 1 ATOM 168 O OP1 . A A 1 8 ? -35.458 -14.810 16.719 1.00 100.74 ? 12 A A OP1 1 ATOM 169 O OP2 . A A 1 8 ? -37.604 -16.119 17.249 1.00 107.84 ? 12 A A OP2 1 ATOM 170 O "O5'" . A A 1 8 ? -36.820 -15.862 14.906 1.00 89.14 ? 12 A A "O5'" 1 ATOM 171 C "C5'" . A A 1 8 ? -35.846 -15.706 13.891 1.00 86.90 ? 12 A A "C5'" 1 ATOM 172 C "C4'" . A A 1 8 ? -36.442 -15.988 12.537 1.00 87.68 ? 12 A A "C4'" 1 ATOM 173 O "O4'" . A A 1 8 ? -36.920 -17.354 12.451 1.00 91.30 ? 12 A A "O4'" 1 ATOM 174 C "C3'" . A A 1 8 ? -37.677 -15.215 12.130 1.00 83.26 ? 12 A A "C3'" 1 ATOM 175 O "O3'" . A A 1 8 ? -37.384 -13.875 11.792 1.00 86.10 ? 12 A A "O3'" 1 ATOM 176 C "C2'" . A A 1 8 ? -38.090 -16.006 10.904 1.00 88.20 ? 12 A A "C2'" 1 ATOM 177 O "O2'" . A A 1 8 ? -37.200 -15.784 9.835 1.00 92.63 ? 12 A A "O2'" 1 ATOM 178 C "C1'" . A A 1 8 ? -37.902 -17.431 11.424 1.00 89.94 ? 12 A A "C1'" 1 ATOM 179 N N9 . A A 1 8 ? -39.139 -17.955 11.997 1.00 96.90 ? 12 A A N9 1 ATOM 180 C C8 . A A 1 8 ? -39.480 -18.092 13.318 1.00 101.09 ? 12 A A C8 1 ATOM 181 N N7 . A A 1 8 ? -40.681 -18.579 13.505 1.00 102.06 ? 12 A A N7 1 ATOM 182 C C5 . A A 1 8 ? -41.162 -18.781 12.220 1.00 92.68 ? 12 A A C5 1 ATOM 183 C C6 . A A 1 8 ? -42.379 -19.275 11.738 1.00 94.80 ? 12 A A C6 1 ATOM 184 N N6 . A A 1 8 ? -43.372 -19.676 12.528 1.00 98.48 ? 12 A A N6 1 ATOM 185 N N1 . A A 1 8 ? -42.543 -19.345 10.396 1.00 96.47 ? 12 A A N1 1 ATOM 186 C C2 . A A 1 8 ? -41.536 -18.944 9.605 1.00 95.47 ? 12 A A C2 1 ATOM 187 N N3 . A A 1 8 ? -40.342 -18.462 9.942 1.00 91.74 ? 12 A A N3 1 ATOM 188 C C4 . A A 1 8 ? -40.220 -18.404 11.281 1.00 90.69 ? 12 A A C4 1 ATOM 189 P P . A A 1 9 ? -38.434 -12.727 12.164 1.00 94.26 ? 13 A A P 1 ATOM 190 O OP1 . A A 1 9 ? -37.760 -11.442 11.884 1.00 105.07 ? 13 A A OP1 1 ATOM 191 O OP2 . A A 1 9 ? -38.975 -12.995 13.513 1.00 87.63 ? 13 A A OP2 1 ATOM 192 O "O5'" . A A 1 9 ? -39.601 -12.907 11.104 1.00 82.84 ? 13 A A "O5'" 1 ATOM 193 C "C5'" . A A 1 9 ? -39.323 -12.905 9.710 1.00 93.83 ? 13 A A "C5'" 1 ATOM 194 C "C4'" . A A 1 9 ? -40.468 -13.532 8.957 1.00 95.95 ? 13 A A "C4'" 1 ATOM 195 O "O4'" . A A 1 9 ? -40.572 -14.933 9.327 1.00 87.66 ? 13 A A "O4'" 1 ATOM 196 C "C3'" . A A 1 9 ? -41.845 -12.950 9.258 1.00 94.58 ? 13 A A "C3'" 1 ATOM 197 O "O3'" . A A 1 9 ? -42.107 -11.839 8.408 1.00 95.60 ? 13 A A "O3'" 1 ATOM 198 C "C2'" . A A 1 9 ? -42.759 -14.113 8.898 1.00 82.28 ? 13 A A "C2'" 1 ATOM 199 O "O2'" . A A 1 9 ? -42.988 -14.219 7.513 1.00 99.40 ? 13 A A "O2'" 1 ATOM 200 C "C1'" . A A 1 9 ? -41.937 -15.307 9.382 1.00 84.60 ? 13 A A "C1'" 1 ATOM 201 N N9 . A A 1 9 ? -42.270 -15.646 10.760 1.00 93.07 ? 13 A A N9 1 ATOM 202 C C8 . A A 1 9 ? -41.515 -15.490 11.897 1.00 94.69 ? 13 A A C8 1 ATOM 203 N N7 . A A 1 9 ? -42.133 -15.861 12.994 1.00 95.08 ? 13 A A N7 1 ATOM 204 C C5 . A A 1 9 ? -43.371 -16.300 12.544 1.00 91.06 ? 13 A A C5 1 ATOM 205 C C6 . A A 1 9 ? -44.489 -16.815 13.210 1.00 87.49 ? 13 A A C6 1 ATOM 206 N N6 . A A 1 9 ? -44.547 -16.999 14.530 1.00 98.54 ? 13 A A N6 1 ATOM 207 N N1 . A A 1 9 ? -45.564 -17.142 12.467 1.00 84.40 ? 13 A A N1 1 ATOM 208 C C2 . A A 1 9 ? -45.504 -16.971 11.143 1.00 93.13 ? 13 A A C2 1 ATOM 209 N N3 . A A 1 9 ? -44.510 -16.507 10.401 1.00 94.41 ? 13 A A N3 1 ATOM 210 C C4 . A A 1 9 ? -43.463 -16.181 11.171 1.00 93.16 ? 13 A A C4 1 ATOM 211 P P . A A 1 10 ? -42.712 -10.479 9.019 1.00 108.28 ? 14 A A P 1 ATOM 212 O OP1 . A A 1 10 ? -42.830 -9.544 7.874 1.00 114.33 ? 14 A A OP1 1 ATOM 213 O OP2 . A A 1 10 ? -41.942 -10.069 10.230 1.00 100.52 ? 14 A A OP2 1 ATOM 214 O "O5'" . A A 1 10 ? -44.192 -10.863 9.465 1.00 96.71 ? 14 A A "O5'" 1 ATOM 215 C "C5'" . A A 1 10 ? -45.191 -11.150 8.496 1.00 93.35 ? 14 A A "C5'" 1 ATOM 216 C "C4'" . A A 1 10 ? -46.365 -11.825 9.152 1.00 90.99 ? 14 A A "C4'" 1 ATOM 217 O "O4'" . A A 1 10 ? -45.908 -13.060 9.757 1.00 92.05 ? 14 A A "O4'" 1 ATOM 218 C "C3'" . A A 1 10 ? -46.968 -11.065 10.317 1.00 93.02 ? 14 A A "C3'" 1 ATOM 219 O "O3'" . A A 1 10 ? -47.884 -10.077 9.867 1.00 91.69 ? 14 A A "O3'" 1 ATOM 220 C "C2'" . A A 1 10 ? -47.649 -12.177 11.102 1.00 84.47 ? 14 A A "C2'" 1 ATOM 221 O "O2'" . A A 1 10 ? -48.897 -12.558 10.575 1.00 90.43 ? 14 A A "O2'" 1 ATOM 222 C "C1'" . A A 1 10 ? -46.649 -13.317 10.933 1.00 86.32 ? 14 A A "C1'" 1 ATOM 223 N N9 . A A 1 10 ? -45.716 -13.401 12.049 1.00 84.57 ? 14 A A N9 1 ATOM 224 C C8 . A A 1 10 ? -44.380 -13.105 12.070 1.00 87.86 ? 14 A A C8 1 ATOM 225 N N7 . A A 1 10 ? -43.821 -13.283 13.244 1.00 92.86 ? 14 A A N7 1 ATOM 226 C C5 . A A 1 10 ? -44.863 -13.722 14.045 1.00 85.87 ? 14 A A C5 1 ATOM 227 C C6 . A A 1 10 ? -44.928 -14.076 15.394 1.00 93.90 ? 14 A A C6 1 ATOM 228 N N6 . A A 1 10 ? -43.880 -14.052 16.220 1.00 104.07 ? 14 A A N6 1 ATOM 229 N N1 . A A 1 10 ? -46.123 -14.463 15.881 1.00 90.51 ? 14 A A N1 1 ATOM 230 C C2 . A A 1 10 ? -47.172 -14.494 15.059 1.00 87.73 ? 14 A A C2 1 ATOM 231 N N3 . A A 1 10 ? -47.236 -14.191 13.771 1.00 92.60 ? 14 A A N3 1 ATOM 232 C C4 . A A 1 10 ? -46.033 -13.804 13.320 1.00 85.75 ? 14 A A C4 1 ATOM 233 P P . A A 1 11 ? -47.931 -8.649 10.601 1.00 97.01 ? 15 A A P 1 ATOM 234 O OP1 . A A 1 11 ? -48.772 -7.750 9.779 1.00 99.02 ? 15 A A OP1 1 ATOM 235 O OP2 . A A 1 11 ? -46.537 -8.259 10.928 1.00 100.13 ? 15 A A OP2 1 ATOM 236 O "O5'" . A A 1 11 ? -48.701 -8.922 11.967 1.00 89.35 ? 15 A A "O5'" 1 ATOM 237 C "C5'" . A A 1 11 ? -50.053 -9.359 11.966 1.00 93.42 ? 15 A A "C5'" 1 ATOM 238 C "C4'" . A A 1 11 ? -50.378 -10.020 13.279 1.00 90.61 ? 15 A A "C4'" 1 ATOM 239 O "O4'" . A A 1 11 ? -49.425 -11.092 13.499 1.00 90.13 ? 15 A A "O4'" 1 ATOM 240 C "C3'" . A A 1 11 ? -50.172 -9.148 14.505 1.00 91.49 ? 15 A A "C3'" 1 ATOM 241 O "O3'" . A A 1 11 ? -51.256 -8.258 14.733 1.00 84.34 ? 15 A A "O3'" 1 ATOM 242 C "C2'" . A A 1 11 ? -50.033 -10.186 15.608 1.00 87.86 ? 15 A A "C2'" 1 ATOM 243 O "O2'" . A A 1 11 ? -51.264 -10.684 16.072 1.00 96.15 ? 15 A A "O2'" 1 ATOM 244 C "C1'" . A A 1 11 ? -49.242 -11.281 14.893 1.00 89.47 ? 15 A A "C1'" 1 ATOM 245 N N9 . A A 1 11 ? -47.817 -11.178 15.191 1.00 87.49 ? 15 A A N9 1 ATOM 246 C C8 . A A 1 11 ? -46.789 -10.806 14.359 1.00 88.90 ? 15 A A C8 1 ATOM 247 N N7 . A A 1 11 ? -45.619 -10.770 14.951 1.00 95.42 ? 15 A A N7 1 ATOM 248 C C5 . A A 1 11 ? -45.895 -11.145 16.259 1.00 89.03 ? 15 A A C5 1 ATOM 249 C C6 . A A 1 11 ? -45.081 -11.285 17.393 1.00 92.31 ? 15 A A C6 1 ATOM 250 N N6 . A A 1 11 ? -43.774 -11.037 17.394 1.00 93.79 ? 15 A A N6 1 ATOM 251 N N1 . A A 1 11 ? -45.665 -11.690 18.544 1.00 91.97 ? 15 A A N1 1 ATOM 252 C C2 . A A 1 11 ? -46.986 -11.932 18.540 1.00 92.05 ? 15 A A C2 1 ATOM 253 N N3 . A A 1 11 ? -47.859 -11.829 17.538 1.00 87.65 ? 15 A A N3 1 ATOM 254 C C4 . A A 1 11 ? -47.241 -11.421 16.414 1.00 88.24 ? 15 A A C4 1 ATOM 255 P P . A A 1 12 ? -50.961 -6.790 15.322 1.00 91.99 ? 16 A A P 1 ATOM 256 O OP1 . A A 1 12 ? -52.237 -6.028 15.282 1.00 102.81 ? 16 A A OP1 1 ATOM 257 O OP2 . A A 1 12 ? -49.750 -6.252 14.635 1.00 88.14 ? 16 A A OP2 1 ATOM 258 O "O5'" . A A 1 12 ? -50.603 -7.033 16.853 1.00 86.02 ? 16 A A "O5'" 1 ATOM 259 C "C5'" . A A 1 12 ? -51.528 -7.664 17.722 1.00 92.84 ? 16 A A "C5'" 1 ATOM 260 C "C4'" . A A 1 12 ? -50.846 -8.074 19.006 1.00 92.06 ? 16 A A "C4'" 1 ATOM 261 O "O4'" . A A 1 12 ? -49.703 -8.913 18.717 1.00 89.05 ? 16 A A "O4'" 1 ATOM 262 C "C3'" . A A 1 12 ? -50.225 -6.976 19.850 1.00 83.03 ? 16 A A "C3'" 1 ATOM 263 O "O3'" . A A 1 12 ? -51.239 -6.315 20.594 1.00 87.65 ? 16 A A "O3'" 1 ATOM 264 C "C2'" . A A 1 12 ? -49.318 -7.786 20.770 1.00 86.52 ? 16 A A "C2'" 1 ATOM 265 O "O2'" . A A 1 12 ? -50.021 -8.346 21.864 1.00 83.11 ? 16 A A "O2'" 1 ATOM 266 C "C1'" . A A 1 12 ? -48.838 -8.902 19.835 1.00 85.28 ? 16 A A "C1'" 1 ATOM 267 N N9 . A A 1 12 ? -47.473 -8.704 19.356 1.00 82.51 ? 16 A A N9 1 ATOM 268 C C8 . A A 1 12 ? -47.051 -8.397 18.086 1.00 83.79 ? 16 A A C8 1 ATOM 269 N N7 . A A 1 12 ? -45.752 -8.259 17.982 1.00 87.83 ? 16 A A N7 1 ATOM 270 C C5 . A A 1 12 ? -45.288 -8.496 19.269 1.00 84.72 ? 16 A A C5 1 ATOM 271 C C6 . A A 1 12 ? -43.995 -8.495 19.826 1.00 90.03 ? 16 A A C6 1 ATOM 272 N N6 . A A 1 12 ? -42.887 -8.226 19.127 1.00 89.44 ? 16 A A N6 1 ATOM 273 N N1 . A A 1 12 ? -43.877 -8.782 21.145 1.00 87.81 ? 16 A A N1 1 ATOM 274 C C2 . A A 1 12 ? -44.988 -9.047 21.842 1.00 88.67 ? 16 A A C2 1 ATOM 275 N N3 . A A 1 12 ? -46.258 -9.072 21.429 1.00 86.90 ? 16 A A N3 1 ATOM 276 C C4 . A A 1 12 ? -46.336 -8.782 20.121 1.00 80.31 ? 16 A A C4 1 ATOM 277 P P . G A 1 13 ? -51.000 -4.816 21.128 1.00 98.54 ? 17 G A P 1 ATOM 278 O OP1 . G A 1 13 ? -52.297 -4.369 21.694 1.00 94.71 ? 17 G A OP1 1 ATOM 279 O OP2 . G A 1 13 ? -50.340 -4.010 20.060 1.00 90.29 ? 17 G A OP2 1 ATOM 280 O "O5'" . G A 1 13 ? -49.974 -4.978 22.334 1.00 83.31 ? 17 G A "O5'" 1 ATOM 281 C "C5'" . G A 1 13 ? -50.348 -5.686 23.503 1.00 81.75 ? 17 G A "C5'" 1 ATOM 282 C "C4'" . G A 1 13 ? -49.154 -5.875 24.405 1.00 84.12 ? 17 G A "C4'" 1 ATOM 283 O "O4'" . G A 1 13 ? -48.119 -6.663 23.759 1.00 80.63 ? 17 G A "O4'" 1 ATOM 284 C "C3'" . G A 1 13 ? -48.385 -4.622 24.759 1.00 88.02 ? 17 G A "C3'" 1 ATOM 285 O "O3'" . G A 1 13 ? -49.086 -3.814 25.690 1.00 94.12 ? 17 G A "O3'" 1 ATOM 286 C "C2'" . G A 1 13 ? -47.112 -5.215 25.344 1.00 82.57 ? 17 G A "C2'" 1 ATOM 287 O "O2'" . G A 1 13 ? -47.305 -5.658 26.669 1.00 91.63 ? 17 G A "O2'" 1 ATOM 288 C "C1'" . G A 1 13 ? -46.878 -6.402 24.401 1.00 76.56 ? 17 G A "C1'" 1 ATOM 289 N N9 . G A 1 13 ? -45.872 -6.131 23.377 1.00 76.54 ? 17 G A N9 1 ATOM 290 C C8 . G A 1 13 ? -46.081 -5.928 22.029 1.00 78.77 ? 17 G A C8 1 ATOM 291 N N7 . G A 1 13 ? -44.969 -5.741 21.361 1.00 75.45 ? 17 G A N7 1 ATOM 292 C C5 . G A 1 13 ? -43.970 -5.822 22.328 1.00 74.13 ? 17 G A C5 1 ATOM 293 C C6 . G A 1 13 ? -42.552 -5.729 22.200 1.00 72.81 ? 17 G A C6 1 ATOM 294 O O6 . G A 1 13 ? -41.879 -5.556 21.177 1.00 70.04 ? 17 G A O6 1 ATOM 295 N N1 . G A 1 13 ? -41.916 -5.875 23.424 1.00 68.86 ? 17 G A N1 1 ATOM 296 C C2 . G A 1 13 ? -42.559 -6.090 24.625 1.00 72.74 ? 17 G A C2 1 ATOM 297 N N2 . G A 1 13 ? -41.760 -6.230 25.710 1.00 72.21 ? 17 G A N2 1 ATOM 298 N N3 . G A 1 13 ? -43.881 -6.174 24.757 1.00 66.04 ? 17 G A N3 1 ATOM 299 C C4 . G A 1 13 ? -44.513 -6.043 23.577 1.00 70.45 ? 17 G A C4 1 ATOM 300 P P . U A 1 14 ? -48.974 -2.215 25.582 1.00 104.61 ? 18 U A P 1 ATOM 301 O OP1 . U A 1 14 ? -49.839 -1.655 26.659 1.00 88.29 ? 18 U A OP1 1 ATOM 302 O OP2 . U A 1 14 ? -49.228 -1.847 24.160 1.00 86.66 ? 18 U A OP2 1 ATOM 303 O "O5'" . U A 1 14 ? -47.448 -1.928 25.942 1.00 74.58 ? 18 U A "O5'" 1 ATOM 304 C "C5'" . U A 1 14 ? -46.944 -2.247 27.235 1.00 78.51 ? 18 U A "C5'" 1 ATOM 305 C "C4'" . U A 1 14 ? -45.438 -2.115 27.276 1.00 74.05 ? 18 U A "C4'" 1 ATOM 306 O "O4'" . U A 1 14 ? -44.784 -3.160 26.504 1.00 84.45 ? 18 U A "O4'" 1 ATOM 307 C "C3'" . U A 1 14 ? -44.816 -0.845 26.733 1.00 80.04 ? 18 U A "C3'" 1 ATOM 308 O "O3'" . U A 1 14 ? -44.944 0.212 27.668 1.00 86.62 ? 18 U A "O3'" 1 ATOM 309 C "C2'" . U A 1 14 ? -43.365 -1.281 26.627 1.00 80.90 ? 18 U A "C2'" 1 ATOM 310 O "O2'" . U A 1 14 ? -42.769 -1.325 27.904 1.00 93.06 ? 18 U A "O2'" 1 ATOM 311 C "C1'" . U A 1 14 ? -43.518 -2.697 26.056 1.00 69.67 ? 18 U A "C1'" 1 ATOM 312 N N1 . U A 1 14 ? -43.532 -2.691 24.587 1.00 60.70 ? 18 U A N1 1 ATOM 313 C C2 . U A 1 14 ? -42.319 -2.659 23.931 1.00 69.77 ? 18 U A C2 1 ATOM 314 O O2 . U A 1 14 ? -41.252 -2.727 24.514 1.00 76.05 ? 18 U A O2 1 ATOM 315 N N3 . U A 1 14 ? -42.396 -2.545 22.557 1.00 61.56 ? 18 U A N3 1 ATOM 316 C C4 . U A 1 14 ? -43.543 -2.459 21.802 1.00 70.46 ? 18 U A C4 1 ATOM 317 O O4 . U A 1 14 ? -43.486 -2.358 20.571 1.00 81.15 ? 18 U A O4 1 ATOM 318 C C5 . U A 1 14 ? -44.762 -2.495 22.574 1.00 69.88 ? 18 U A C5 1 ATOM 319 C C6 . U A 1 14 ? -44.727 -2.613 23.916 1.00 68.96 ? 18 U A C6 1 ATOM 320 P P . C A 1 15 ? -45.074 1.731 27.153 1.00 98.97 ? 19 C A P 1 ATOM 321 O OP1 . C A 1 15 ? -43.779 2.122 26.529 1.00 81.26 ? 19 C A OP1 1 ATOM 322 O OP2 . C A 1 15 ? -45.619 2.531 28.284 1.00 100.10 ? 19 C A OP2 1 ATOM 323 O "O5'" . C A 1 15 ? -46.187 1.662 26.015 1.00 87.85 ? 19 C A "O5'" 1 ATOM 324 C "C5'" . C A 1 15 ? -47.570 1.768 26.336 1.00 90.19 ? 19 C A "C5'" 1 ATOM 325 C "C4'" . C A 1 15 ? -48.310 2.424 25.197 1.00 96.24 ? 19 C A "C4'" 1 ATOM 326 O "O4'" . C A 1 15 ? -47.728 3.731 24.957 1.00 103.74 ? 19 C A "O4'" 1 ATOM 327 C "C3'" . C A 1 15 ? -48.176 1.718 23.861 1.00 88.06 ? 19 C A "C3'" 1 ATOM 328 O "O3'" . C A 1 15 ? -48.977 0.549 23.758 1.00 100.85 ? 19 C A "O3'" 1 ATOM 329 C "C2'" . C A 1 15 ? -48.435 2.843 22.867 1.00 81.08 ? 19 C A "C2'" 1 ATOM 330 O "O2'" . C A 1 15 ? -49.802 3.108 22.654 1.00 96.32 ? 19 C A "O2'" 1 ATOM 331 C "C1'" . C A 1 15 ? -47.770 4.028 23.570 1.00 89.26 ? 19 C A "C1'" 1 ATOM 332 N N1 . C A 1 15 ? -46.395 4.246 23.102 1.00 86.78 ? 19 C A N1 1 ATOM 333 C C2 . C A 1 15 ? -46.208 4.836 21.850 1.00 88.11 ? 19 C A C2 1 ATOM 334 O O2 . C A 1 15 ? -47.213 5.213 21.216 1.00 91.29 ? 19 C A O2 1 ATOM 335 N N3 . C A 1 15 ? -44.947 4.986 21.365 1.00 81.30 ? 19 C A N3 1 ATOM 336 C C4 . C A 1 15 ? -43.904 4.582 22.095 1.00 84.63 ? 19 C A C4 1 ATOM 337 N N4 . C A 1 15 ? -42.686 4.724 21.576 1.00 82.61 ? 19 C A N4 1 ATOM 338 C C5 . C A 1 15 ? -44.067 4.008 23.393 1.00 87.45 ? 19 C A C5 1 ATOM 339 C C6 . C A 1 15 ? -45.319 3.861 23.853 1.00 86.91 ? 19 C A C6 1 HETATM 340 SR SR . SR B 2 . ? -51.699 1.475 23.089 1.00 108.18 ? 101 SR A SR 1 HETATM 341 SR SR . SR C 2 . ? -40.272 -20.136 23.276 0.50 142.28 ? 102 SR A SR 1 HETATM 342 SR SR . SR D 2 . ? -42.735 -7.380 13.600 1.00 154.06 ? 103 SR A SR 1 #