0.029863
0.000000
0.000000
0.000000
0.020927
0.000000
0.000000
0.000000
0.012674
0.00000
0.00000
0.00000
Xiao, S.
Chen, S.
Chen, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
33.486
47.785
78.903
C18 H21 N3 O3 S
359.443
6-[(3S)-3-azanylpiperidin-1-yl]sulfonyl-1-ethyl-benzo[cd]indol-2-one
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
C
Y
6
N
C
Y
7
N
C
N
8
N
N
N
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
C
N
17
N
O
N
18
N
C
N
19
N
S
N
20
N
O
N
21
N
O
N
22
N
N
N
23
N
C
N
24
S
C
N
25
N
N
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
N
N
48
S
C
N
49
N
C
N
50
N
O
N
51
N
C
N
52
N
O
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
N
N
61
S
C
N
62
N
C
N
63
N
O
N
64
N
C
N
65
N
C
N
66
N
C
N
67
N
N
N
68
N
C
N
69
N
N
N
70
N
N
N
71
N
O
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
N
N
88
S
C
N
89
N
C
N
90
N
O
N
91
N
C
N
92
N
C
N
93
N
O
N
94
N
N
N
95
N
O
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
N
N
105
S
C
N
106
N
C
N
107
N
O
N
108
N
C
N
109
N
C
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
N
N
121
R
C
N
122
N
C
N
123
N
O
N
124
N
C
N
125
N
S
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
N
N
135
S
C
N
136
N
C
N
137
N
O
N
138
N
C
N
139
N
C
N
140
N
C
N
141
N
O
N
142
N
N
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
N
N
155
S
C
N
156
N
C
N
157
N
O
N
158
N
C
N
159
N
C
N
160
N
C
N
161
N
O
N
162
N
O
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
N
N
174
N
C
N
175
N
C
N
176
N
O
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
Y
188
N
C
Y
189
N
N
Y
190
N
C
Y
191
N
C
Y
192
N
N
N
193
N
O
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
N
N
208
S
C
N
209
N
C
N
210
N
O
N
211
S
C
N
212
N
C
N
213
N
C
N
214
N
C
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
N
N
230
S
C
N
231
N
C
N
232
N
O
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
C
N
259
N
N
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
C
N
282
N
S
N
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
N
307
N
O
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
C
N
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
R
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
N
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
doub
Y
10
N
doub
Y
11
N
sing
Y
12
N
sing
N
13
N
doub
N
14
N
sing
Y
15
N
doub
Y
16
N
doub
Y
17
N
sing
Y
18
N
sing
Y
19
N
sing
N
20
N
sing
Y
21
N
doub
Y
22
N
doub
Y
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
doub
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
Y
189
N
sing
Y
190
N
doub
Y
191
N
doub
N
192
N
sing
Y
193
N
sing
N
194
N
sing
Y
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
doub
Y
298
N
sing
Y
299
N
sing
N
300
N
sing
Y
301
N
doub
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
doub
Y
371
N
sing
Y
372
N
sing
N
373
N
sing
Y
374
N
sing
Y
375
N
doub
N
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
Y
394
N
doub
Y
395
N
sing
Y
396
N
sing
N
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
To Be Published
0353
BRD4 Bromodomain 1 with an inhibitor
10.2210/pdb5z8z/pdb
pdb_00005z8z
80
1
PIXEL
2017-11-30
DECTRIS PILATUS3 6M
SINGLE WAVELENGTH
M
x-ray
1
0.978
1.0
BL19U1
SSRF
0.978
SYNCHROTRON
SSRF BEAMLINE BL19U1
15099.380
Bromodomain-containing protein 4
Bromodomain 1
1
man
polymer
359.443
6-[(3S)-3-azanylpiperidin-1-yl]sulfonyl-1-ethyl-benzo[cd]indol-2-one
1
syn
non-polymer
18.015
water
71
nat
water
Protein HUNK1
no
no
SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN
AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN
AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
127
BRD4, HUNK1
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
2.09
41.16
VAPOR DIFFUSION, SITTING DROP
4M sodium formate, 15% glycerol
289
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Data collection
Database references
1
0
2019-02-06
1
1
2024-03-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
N
PDBJ
Y
PDBJ
2018-02-01
REL
REL
99R
99R
SUBJECT OF INVESTIGATION
99R
6-[(3S)-3-azanylpiperidin-1-yl]sulfonyl-1-ethyl-benzo[cd]indol-2-one
HOH
water
LIG
1
2
99R
99R
201
A
HOH
69
3
HOH
HOH
301
A
HOH
68
3
HOH
HOH
302
A
HOH
1
3
HOH
HOH
303
A
HOH
58
3
HOH
HOH
304
A
HOH
39
3
HOH
HOH
305
A
HOH
59
3
HOH
HOH
306
A
HOH
35
3
HOH
HOH
307
A
HOH
17
3
HOH
HOH
308
A
HOH
40
3
HOH
HOH
309
A
HOH
30
3
HOH
HOH
310
A
HOH
10
3
HOH
HOH
311
A
HOH
3
3
HOH
HOH
312
A
HOH
18
3
HOH
HOH
313
A
HOH
31
3
HOH
HOH
314
A
HOH
62
3
HOH
HOH
315
A
HOH
11
3
HOH
HOH
316
A
HOH
37
3
HOH
HOH
317
A
HOH
47
3
HOH
HOH
318
A
HOH
14
3
HOH
HOH
319
A
HOH
4
3
HOH
HOH
320
A
HOH
8
3
HOH
HOH
321
A
HOH
28
3
HOH
HOH
322
A
HOH
46
3
HOH
HOH
323
A
HOH
73
3
HOH
HOH
324
A
HOH
6
3
HOH
HOH
325
A
HOH
22
3
HOH
HOH
326
A
HOH
32
3
HOH
HOH
327
A
HOH
36
3
HOH
HOH
328
A
HOH
48
3
HOH
HOH
329
A
HOH
27
3
HOH
HOH
330
A
HOH
12
3
HOH
HOH
331
A
HOH
5
3
HOH
HOH
332
A
HOH
2
3
HOH
HOH
333
A
HOH
26
3
HOH
HOH
334
A
HOH
75
3
HOH
HOH
335
A
HOH
25
3
HOH
HOH
336
A
HOH
19
3
HOH
HOH
337
A
HOH
64
3
HOH
HOH
338
A
HOH
23
3
HOH
HOH
339
A
HOH
24
3
HOH
HOH
340
A
HOH
9
3
HOH
HOH
341
A
HOH
13
3
HOH
HOH
342
A
HOH
21
3
HOH
HOH
343
A
HOH
16
3
HOH
HOH
344
A
HOH
51
3
HOH
HOH
345
A
HOH
33
3
HOH
HOH
346
A
HOH
63
3
HOH
HOH
347
A
HOH
7
3
HOH
HOH
348
A
HOH
15
3
HOH
HOH
349
A
HOH
53
3
HOH
HOH
350
A
HOH
41
3
HOH
HOH
351
A
HOH
61
3
HOH
HOH
352
A
HOH
42
3
HOH
HOH
353
A
HOH
20
3
HOH
HOH
354
A
HOH
55
3
HOH
HOH
355
A
HOH
71
3
HOH
HOH
356
A
HOH
56
3
HOH
HOH
357
A
HOH
38
3
HOH
HOH
358
A
HOH
54
3
HOH
HOH
359
A
HOH
72
3
HOH
HOH
360
A
HOH
29
3
HOH
HOH
361
A
HOH
65
3
HOH
HOH
362
A
HOH
57
3
HOH
HOH
363
A
HOH
67
3
HOH
HOH
364
A
HOH
50
3
HOH
HOH
365
A
HOH
76
3
HOH
HOH
366
A
HOH
66
3
HOH
HOH
367
A
HOH
60
3
HOH
HOH
368
A
HOH
74
3
HOH
HOH
369
A
HOH
52
3
HOH
HOH
370
A
HOH
49
3
HOH
HOH
371
A
SER
42
n
1
SER
42
A
MET
43
n
2
MET
43
A
ASN
44
n
3
ASN
44
A
PRO
45
n
4
PRO
45
A
PRO
46
n
5
PRO
46
A
PRO
47
n
6
PRO
47
A
PRO
48
n
7
PRO
48
A
GLU
49
n
8
GLU
49
A
THR
50
n
9
THR
50
A
SER
51
n
10
SER
51
A
ASN
52
n
11
ASN
52
A
PRO
53
n
12
PRO
53
A
ASN
54
n
13
ASN
54
A
LYS
55
n
14
LYS
55
A
PRO
56
n
15
PRO
56
A
LYS
57
n
16
LYS
57
A
ARG
58
n
17
ARG
58
A
GLN
59
n
18
GLN
59
A
THR
60
n
19
THR
60
A
ASN
61
n
20
ASN
61
A
GLN
62
n
21
GLN
62
A
LEU
63
n
22
LEU
63
A
GLN
64
n
23
GLN
64
A
TYR
65
n
24
TYR
65
A
LEU
66
n
25
LEU
66
A
LEU
67
n
26
LEU
67
A
ARG
68
n
27
ARG
68
A
VAL
69
n
28
VAL
69
A
VAL
70
n
29
VAL
70
A
LEU
71
n
30
LEU
71
A
LYS
72
n
31
LYS
72
A
THR
73
n
32
THR
73
A
LEU
74
n
33
LEU
74
A
TRP
75
n
34
TRP
75
A
LYS
76
n
35
LYS
76
A
HIS
77
n
36
HIS
77
A
GLN
78
n
37
GLN
78
A
PHE
79
n
38
PHE
79
A
ALA
80
n
39
ALA
80
A
TRP
81
n
40
TRP
81
A
PRO
82
n
41
PRO
82
A
PHE
83
n
42
PHE
83
A
GLN
84
n
43
GLN
84
A
GLN
85
n
44
GLN
85
A
PRO
86
n
45
PRO
86
A
VAL
87
n
46
VAL
87
A
ASP
88
n
47
ASP
88
A
ALA
89
n
48
ALA
89
A
VAL
90
n
49
VAL
90
A
LYS
91
n
50
LYS
91
A
LEU
92
n
51
LEU
92
A
ASN
93
n
52
ASN
93
A
LEU
94
n
53
LEU
94
A
PRO
95
n
54
PRO
95
A
ASP
96
n
55
ASP
96
A
TYR
97
n
56
TYR
97
A
TYR
98
n
57
TYR
98
A
LYS
99
n
58
LYS
99
A
ILE
100
n
59
ILE
100
A
ILE
101
n
60
ILE
101
A
LYS
102
n
61
LYS
102
A
THR
103
n
62
THR
103
A
PRO
104
n
63
PRO
104
A
MET
105
n
64
MET
105
A
ASP
106
n
65
ASP
106
A
MET
107
n
66
MET
107
A
GLY
108
n
67
GLY
108
A
THR
109
n
68
THR
109
A
ILE
110
n
69
ILE
110
A
LYS
111
n
70
LYS
111
A
LYS
112
n
71
LYS
112
A
ARG
113
n
72
ARG
113
A
LEU
114
n
73
LEU
114
A
GLU
115
n
74
GLU
115
A
ASN
116
n
75
ASN
116
A
ASN
117
n
76
ASN
117
A
TYR
118
n
77
TYR
118
A
TYR
119
n
78
TYR
119
A
TRP
120
n
79
TRP
120
A
ASN
121
n
80
ASN
121
A
ALA
122
n
81
ALA
122
A
GLN
123
n
82
GLN
123
A
GLU
124
n
83
GLU
124
A
CYS
125
n
84
CYS
125
A
ILE
126
n
85
ILE
126
A
GLN
127
n
86
GLN
127
A
ASP
128
n
87
ASP
128
A
PHE
129
n
88
PHE
129
A
ASN
130
n
89
ASN
130
A
THR
131
n
90
THR
131
A
MET
132
n
91
MET
132
A
PHE
133
n
92
PHE
133
A
THR
134
n
93
THR
134
A
ASN
135
n
94
ASN
135
A
CYS
136
n
95
CYS
136
A
TYR
137
n
96
TYR
137
A
ILE
138
n
97
ILE
138
A
TYR
139
n
98
TYR
139
A
ASN
140
n
99
ASN
140
A
LYS
141
n
100
LYS
141
A
PRO
142
n
101
PRO
142
A
GLY
143
n
102
GLY
143
A
ASP
144
n
103
ASP
144
A
ASP
145
n
104
ASP
145
A
ILE
146
n
105
ILE
146
A
VAL
147
n
106
VAL
147
A
LEU
148
n
107
LEU
148
A
MET
149
n
108
MET
149
A
ALA
150
n
109
ALA
150
A
GLU
151
n
110
GLU
151
A
ALA
152
n
111
ALA
152
A
LEU
153
n
112
LEU
153
A
GLU
154
n
113
GLU
154
A
LYS
155
n
114
LYS
155
A
LEU
156
n
115
LEU
156
A
PHE
157
n
116
PHE
157
A
LEU
158
n
117
LEU
158
A
GLN
159
n
118
GLN
159
A
LYS
160
n
119
LYS
160
A
ILE
161
n
120
ILE
161
A
ASN
162
n
121
ASN
162
A
GLU
163
n
122
GLU
163
A
LEU
164
n
123
LEU
164
A
PRO
165
n
124
PRO
165
A
THR
166
n
125
THR
166
A
GLU
167
n
126
GLU
167
A
GLU
168
n
127
GLU
168
A
0.8285
0.0809
0.7462
2.4731
-0.2300
1.6788
-0.0610
-0.0342
0.0710
-0.3058
-0.0065
0.1466
-0.0873
-0.0912
0.0396
0.1428
-0.0091
-0.0218
0.1456
0.0046
0.1501
refined
-22.6496
3.1833
87.1378
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
all
author_and_software_defined_assembly
PISA
1
monomeric
none
0
0
7490
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
GLN
59
A
CG
GLN
18
1
Y
1
A
CD
GLN
59
A
CD
GLN
18
1
Y
1
A
OE1
GLN
59
A
OE1
GLN
18
1
Y
1
A
NE2
GLN
59
A
NE2
GLN
18
1
Y
1
A
CD
GLN
78
A
CD
GLN
37
1
Y
1
A
OE1
GLN
78
A
OE1
GLN
37
1
Y
1
A
NE2
GLN
78
A
NE2
GLN
37
1
Y
1
A
CD
LYS
91
A
CD
LYS
50
1
Y
1
A
CE
LYS
91
A
CE
LYS
50
1
Y
1
A
NZ
LYS
91
A
NZ
LYS
50
1
Y
1
A
CD
GLN
123
A
CD
GLN
82
1
Y
1
A
OE1
GLN
123
A
OE1
GLN
82
1
Y
1
A
NE2
GLN
123
A
NE2
GLN
82
1
Y
1
A
CE
LYS
141
A
CE
LYS
100
1
Y
1
A
NZ
LYS
141
A
NZ
LYS
100
1
Y
1
A
A
O
O
HOH
HOH
347
370
1.99
1
A
A
ND2
O
ASN
HOH
93
301
2.02
1
A
A
O
O
HOH
HOH
348
361
2.06
1
A
ASN
52
-162.06
94.89
1
A
LEU
94
-114.67
64.15
1
A
GLU
167
-68.41
64.65
0.2385
0.1936
0.1959
1.800
40.87
600
12222
4.91
99.45
0.20
1
FREE R-VALUE
1.34
30.97
0.90
1.11
1.800
40.87
71
1143
25
0
1047
0.007
1115
0.911
1528
14.792
680
0.040
161
0.005
194
0.3088
0.2206
1.9813
142
2847
99.00
0.2463
0.1888
2.2680
147
2863
100.00
0.2713
0.2082
2.8574
149
2901
100.00
0.2115
0.1835
40.8842
162
3011
99.00
1.8
40.874
5Z8Z
12236
1
13.67
6.4
99
1.8
1.865
1
refinement
PHENIX
(1.10.1_2155: ???)
data reduction
XDS
data scaling
Aimless
phasing
PHASER
N
BRD4 Bromodomain 1 with an inhibitor
1
N
N
2
N
N
3
N
N
A
THR
60
A
THR
19
HELX_P
A
VAL
69
A
VAL
28
1
AA1
10
A
VAL
69
A
VAL
28
HELX_P
A
LYS
76
A
LYS
35
1
AA2
8
A
ALA
80
A
ALA
39
HELX_P
A
GLN
84
A
GLN
43
5
AA3
5
A
ASP
96
A
ASP
55
HELX_P
A
ILE
101
A
ILE
60
1
AA4
6
A
ASP
106
A
ASP
65
HELX_P
A
ASN
116
A
ASN
75
1
AA5
11
A
ASN
121
A
ASN
80
HELX_P
A
ASN
140
A
ASN
99
1
AA6
20
A
ASP
144
A
ASP
103
HELX_P
A
ASN
162
A
ASN
121
1
AA7
19
TRANSCRIPTION/INHIBITOR
BRD4 Bromodomain 1, inhibitor, complex, TRANSCRIPTION-INHIBITOR complex
BRD4_HUMAN
UNP
1
44
O60885
NPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQ
ECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE
44
168
5Z8Z
44
168
O60885
A
1
3
127
1
expression tag
SER
42
5Z8Z
A
O60885
UNP
1
1
expression tag
MET
43
5Z8Z
A
O60885
UNP
2
binding site for residue 99R A 201
A
99R
201
Software
12
A
TRP
81
A
TRP
40
12
1_555
A
PRO
82
A
PRO
41
12
1_555
A
PHE
83
A
PHE
42
12
1_555
A
VAL
87
A
VAL
46
12
1_555
A
LEU
92
A
LEU
51
12
1_555
A
ASP
96
A
ASP
55
12
4_447
A
TYR
97
A
TYR
56
12
1_555
A
LYS
99
A
LYS
58
12
4_447
A
ASN
140
A
ASN
99
12
1_555
A
ASP
145
A
ASP
104
12
1_555
A
MET
149
A
MET
108
12
1_555
A
HOH
312
C
HOH
12
1_555
19
P 21 21 21