0.019444
0.011226
0.000000
0.000000
0.022452
0.000000
0.000000
0.000000
0.002971
0.00000
0.00000
0.00000
0000-0003-4437-3530
Huang, W.C.
Liao, J.H.
Hsiao, T.C.
Maestre-Reyna, M.
Bessho, Y.
Tsai, M.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
51.430
51.430
336.570
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
GE
Chembiochem
1439-7633
20
140
146
10.1002/cbic.201800436
30378729
Binding and Enhanced Binding between Key Immunity Proteins TRAF6 and TIFA.
2019
0000-0003-4437-3530
0000-0002-6853-1073
0000-0001-6435-2214
0000-0002-9566-7216
0000-0001-9297-7473
0000-0003-1374-0414
10.2210/pdb6a33/pdb
pdb_00006a33
100
1
K-B mirrors
CCD
2017-11-07
RAYONIX MX-225
liquid nitrogen cooled double crystal
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
BL32XU
SPring-8
1
SYNCHROTRON
SPRING-8 BEAMLINE BL32XU
18857.770
TNF receptor-associated factor 6
2.3.2.27
1
man
polymer
1614.557
15-mer peptide from TRAF-interacting protein with FHA domain-containing protein A
1
syn
polymer
18.015
water
123
nat
water
E3 ubiquitin-protein ligase TRAF6,Interleukin-1 signal transducer,RING finger protein 85,RING-type E3 ubiquitin transferase TRAF6
Putative MAPK-activating protein PM14,Putative NF-kappa-B-activating protein 20,TRAF2-binding protein
no
no
MNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQG
TIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTLEHHHHH
H
MNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQG
TIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTLEHHHHH
H
A
polypeptide(L)
no
no
SSQSSSPTEMDENES
SSQSSSPTEMDENES
I
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
161
TRAF6, RNF85
9606
Homo sapiens
562
Escherichia coli
Biological sequence
1
3.14
60.81
EVAPORATION
7.5
0.1 M HEPES sodium, pH 7.5, 1M Sodium citrate tribasic dihydrate, and 10 mM TCEP
277
citation
citation_author
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Data collection
Database references
Data collection
Database references
Refinement description
1
0
2018-12-05
1
1
2019-02-06
1
2
2023-11-22
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation_author.identifier_ORCID
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Taiwan
MOST105-0210-01-12-01
Taiwan
MOST106-0210-01-15-04
Taiwan
MOST107-0210-01-19-02
5ZUJ contains the same TRAF protein complexed with TIFA mutant C-terminus consensus TRAF-binding peptide
N
PDBJ
Y
PDBJ
2018-06-14
REL
REL
1
A
O
HOH
717
6.05
HOH
water
9606
Human
Homo sapiens
sample
1
15
5ZUJ
PDB
experimental model
HOH
13
3
HOH
HOH
601
A
HOH
40
3
HOH
HOH
602
A
HOH
212
3
HOH
HOH
603
A
HOH
2
3
HOH
HOH
604
A
HOH
106
3
HOH
HOH
605
A
HOH
44
3
HOH
HOH
606
A
HOH
36
3
HOH
HOH
607
A
HOH
238
3
HOH
HOH
608
A
HOH
19
3
HOH
HOH
609
A
HOH
1
3
HOH
HOH
610
A
HOH
24
3
HOH
HOH
611
A
HOH
14
3
HOH
HOH
612
A
HOH
236
3
HOH
HOH
613
A
HOH
8
3
HOH
HOH
614
A
HOH
264
3
HOH
HOH
615
A
HOH
5
3
HOH
HOH
616
A
HOH
59
3
HOH
HOH
617
A
HOH
33
3
HOH
HOH
618
A
HOH
6
3
HOH
HOH
619
A
HOH
50
3
HOH
HOH
620
A
HOH
11
3
HOH
HOH
621
A
HOH
28
3
HOH
HOH
622
A
HOH
233
3
HOH
HOH
623
A
HOH
3
3
HOH
HOH
624
A
HOH
249
3
HOH
HOH
625
A
HOH
23
3
HOH
HOH
626
A
HOH
269
3
HOH
HOH
627
A
HOH
45
3
HOH
HOH
628
A
HOH
32
3
HOH
HOH
629
A
HOH
9
3
HOH
HOH
630
A
HOH
20
3
HOH
HOH
631
A
HOH
272
3
HOH
HOH
632
A
HOH
78
3
HOH
HOH
633
A
HOH
21
3
HOH
HOH
634
A
HOH
7
3
HOH
HOH
635
A
HOH
291
3
HOH
HOH
636
A
HOH
103
3
HOH
HOH
637
A
HOH
4
3
HOH
HOH
638
A
HOH
200
3
HOH
HOH
639
A
HOH
209
3
HOH
HOH
640
A
HOH
182
3
HOH
HOH
641
A
HOH
102
3
HOH
HOH
642
A
HOH
273
3
HOH
HOH
643
A
HOH
252
3
HOH
HOH
644
A
HOH
276
3
HOH
HOH
645
A
HOH
210
3
HOH
HOH
646
A
HOH
48
3
HOH
HOH
647
A
HOH
93
3
HOH
HOH
648
A
HOH
37
3
HOH
HOH
649
A
HOH
72
3
HOH
HOH
650
A
HOH
87
3
HOH
HOH
651
A
HOH
204
3
HOH
HOH
652
A
HOH
12
3
HOH
HOH
653
A
HOH
228
3
HOH
HOH
654
A
HOH
211
3
HOH
HOH
655
A
HOH
25
3
HOH
HOH
656
A
HOH
95
3
HOH
HOH
657
A
HOH
274
3
HOH
HOH
658
A
HOH
124
3
HOH
HOH
659
A
HOH
227
3
HOH
HOH
660
A
HOH
301
3
HOH
HOH
661
A
HOH
29
3
HOH
HOH
662
A
HOH
60
3
HOH
HOH
663
A
HOH
251
3
HOH
HOH
664
A
HOH
58
3
HOH
HOH
665
A
HOH
38
3
HOH
HOH
666
A
HOH
17
3
HOH
HOH
667
A
HOH
91
3
HOH
HOH
668
A
HOH
237
3
HOH
HOH
669
A
HOH
189
3
HOH
HOH
670
A
HOH
199
3
HOH
HOH
671
A
HOH
52
3
HOH
HOH
672
A
HOH
298
3
HOH
HOH
673
A
HOH
186
3
HOH
HOH
674
A
HOH
55
3
HOH
HOH
675
A
HOH
203
3
HOH
HOH
676
A
HOH
86
3
HOH
HOH
677
A
HOH
283
3
HOH
HOH
678
A
HOH
31
3
HOH
HOH
679
A
HOH
263
3
HOH
HOH
680
A
HOH
97
3
HOH
HOH
681
A
HOH
235
3
HOH
HOH
682
A
HOH
96
3
HOH
HOH
683
A
HOH
297
3
HOH
HOH
684
A
HOH
80
3
HOH
HOH
685
A
HOH
39
3
HOH
HOH
686
A
HOH
35
3
HOH
HOH
687
A
HOH
293
3
HOH
HOH
688
A
HOH
285
3
HOH
HOH
689
A
HOH
198
3
HOH
HOH
690
A
HOH
300
3
HOH
HOH
691
A
HOH
292
3
HOH
HOH
692
A
HOH
63
3
HOH
HOH
693
A
HOH
232
3
HOH
HOH
694
A
HOH
296
3
HOH
HOH
695
A
HOH
108
3
HOH
HOH
696
A
HOH
258
3
HOH
HOH
697
A
HOH
16
3
HOH
HOH
698
A
HOH
165
3
HOH
HOH
699
A
HOH
10
3
HOH
HOH
700
A
HOH
271
3
HOH
HOH
701
A
HOH
278
3
HOH
HOH
702
A
HOH
289
3
HOH
HOH
703
A
HOH
246
3
HOH
HOH
704
A
HOH
255
3
HOH
HOH
705
A
HOH
299
3
HOH
HOH
706
A
HOH
284
3
HOH
HOH
707
A
HOH
219
3
HOH
HOH
708
A
HOH
294
3
HOH
HOH
709
A
HOH
240
3
HOH
HOH
710
A
HOH
230
3
HOH
HOH
711
A
HOH
205
3
HOH
HOH
712
A
HOH
267
3
HOH
HOH
713
A
HOH
69
3
HOH
HOH
714
A
HOH
281
3
HOH
HOH
715
A
HOH
66
3
HOH
HOH
716
A
HOH
214
3
HOH
HOH
717
A
HOH
290
3
HOH
HOH
201
I
HOH
18
3
HOH
HOH
202
I
HOH
73
3
HOH
HOH
203
I
HOH
47
3
HOH
HOH
204
I
HOH
64
3
HOH
HOH
205
I
HOH
136
3
HOH
HOH
206
I
n
1
349
A
ASN
350
n
2
ASN
350
A
GLY
351
n
3
GLY
351
A
ILE
352
n
4
ILE
352
A
TYR
353
n
5
TYR
353
A
ILE
354
n
6
ILE
354
A
TRP
355
n
7
TRP
355
A
LYS
356
n
8
LYS
356
A
ILE
357
n
9
ILE
357
A
GLY
358
n
10
GLY
358
A
ASN
359
n
11
ASN
359
A
PHE
360
n
12
PHE
360
A
GLY
361
n
13
GLY
361
A
MET
362
n
14
MET
362
A
HIS
363
n
15
HIS
363
A
LEU
364
n
16
LEU
364
A
LYS
365
n
17
LYS
365
A
CYS
366
n
18
CYS
366
A
GLN
367
n
19
GLN
367
A
GLU
368
n
20
GLU
368
A
GLU
369
n
21
GLU
369
A
GLU
370
n
22
GLU
370
A
LYS
371
n
23
LYS
371
A
PRO
372
n
24
PRO
372
A
VAL
373
n
25
VAL
373
A
VAL
374
n
26
VAL
374
A
ILE
375
n
27
ILE
375
A
HIS
376
n
28
HIS
376
A
SER
377
n
29
SER
377
A
PRO
378
n
30
PRO
378
A
GLY
379
n
31
GLY
379
A
PHE
380
n
32
PHE
380
A
TYR
381
n
33
TYR
381
A
THR
382
n
34
THR
382
A
GLY
383
n
35
GLY
383
A
LYS
384
n
36
LYS
384
A
PRO
385
n
37
PRO
385
A
GLY
386
n
38
GLY
386
A
TYR
387
n
39
TYR
387
A
LYS
388
n
40
LYS
388
A
LEU
389
n
41
LEU
389
A
CYS
390
n
42
CYS
390
A
MET
391
n
43
MET
391
A
ARG
392
n
44
ARG
392
A
LEU
393
n
45
LEU
393
A
HIS
394
n
46
HIS
394
A
LEU
395
n
47
LEU
395
A
GLN
396
n
48
GLN
396
A
LEU
397
n
49
LEU
397
A
PRO
398
n
50
PRO
398
A
THR
399
n
51
THR
399
A
ALA
400
n
52
ALA
400
A
GLN
401
n
53
GLN
401
A
ARG
402
n
54
ARG
402
A
CYS
403
n
55
CYS
403
A
ALA
404
n
56
ALA
404
A
ASN
405
n
57
ASN
405
A
TYR
406
n
58
TYR
406
A
ILE
407
n
59
ILE
407
A
SER
408
n
60
SER
408
A
LEU
409
n
61
LEU
409
A
PHE
410
n
62
PHE
410
A
VAL
411
n
63
VAL
411
A
HIS
412
n
64
HIS
412
A
THR
413
n
65
THR
413
A
MET
414
n
66
MET
414
A
GLN
415
n
67
GLN
415
A
GLY
416
n
68
GLY
416
A
GLU
417
n
69
GLU
417
A
TYR
418
n
70
TYR
418
A
ASP
419
n
71
ASP
419
A
SER
420
n
72
SER
420
A
HIS
421
n
73
HIS
421
A
LEU
422
n
74
LEU
422
A
PRO
423
n
75
PRO
423
A
TRP
424
n
76
TRP
424
A
PRO
425
n
77
PRO
425
A
PHE
426
n
78
PHE
426
A
GLN
427
n
79
GLN
427
A
GLY
428
n
80
GLY
428
A
THR
429
n
81
THR
429
A
ILE
430
n
82
ILE
430
A
ARG
431
n
83
ARG
431
A
LEU
432
n
84
LEU
432
A
THR
433
n
85
THR
433
A
ILE
434
n
86
ILE
434
A
LEU
435
n
87
LEU
435
A
ASP
436
n
88
ASP
436
A
GLN
437
n
89
GLN
437
A
SER
438
n
90
SER
438
A
GLU
439
n
91
GLU
439
A
ALA
440
n
92
ALA
440
A
PRO
441
n
93
PRO
441
A
VAL
442
n
94
VAL
442
A
ARG
443
n
95
ARG
443
A
GLN
444
n
96
GLN
444
A
ASN
445
n
97
ASN
445
A
HIS
446
n
98
HIS
446
A
GLU
447
n
99
GLU
447
A
GLU
448
n
100
GLU
448
A
ILE
449
n
101
ILE
449
A
MET
450
n
102
MET
450
A
ASP
451
n
103
ASP
451
A
ALA
452
n
104
ALA
452
A
LYS
453
n
105
LYS
453
A
PRO
454
n
106
PRO
454
A
GLU
455
n
107
GLU
455
A
LEU
456
n
108
LEU
456
A
LEU
457
n
109
LEU
457
A
ALA
458
n
110
ALA
458
A
PHE
459
n
111
PHE
459
A
GLN
460
n
112
GLN
460
A
ARG
461
n
113
ARG
461
A
PRO
462
n
114
PRO
462
A
THR
463
n
115
THR
463
A
ILE
464
n
116
ILE
464
A
PRO
465
n
117
PRO
465
A
ARG
466
n
118
ARG
466
A
ASN
467
n
119
ASN
467
A
PRO
468
n
120
PRO
468
A
LYS
469
n
121
LYS
469
A
GLY
470
n
122
GLY
470
A
PHE
471
n
123
PHE
471
A
GLY
472
n
124
GLY
472
A
TYR
473
n
125
TYR
473
A
VAL
474
n
126
VAL
474
A
THR
475
n
127
THR
475
A
PHE
476
n
128
PHE
476
A
MET
477
n
129
MET
477
A
HIS
478
n
130
HIS
478
A
LEU
479
n
131
LEU
479
A
GLU
480
n
132
GLU
480
A
ALA
481
n
133
ALA
481
A
LEU
482
n
134
LEU
482
A
ARG
483
n
135
ARG
483
A
GLN
484
n
136
GLN
484
A
ARG
485
n
137
ARG
485
A
THR
486
n
138
THR
486
A
PHE
487
n
139
PHE
487
A
ILE
488
n
140
ILE
488
A
LYS
489
n
141
LYS
489
A
ASP
490
n
142
ASP
490
A
ASP
491
n
143
ASP
491
A
THR
492
n
144
THR
492
A
LEU
493
n
145
LEU
493
A
LEU
494
n
146
LEU
494
A
VAL
495
n
147
VAL
495
A
ARG
496
n
148
ARG
496
A
CYS
497
n
149
CYS
497
A
GLU
498
n
150
GLU
498
A
VAL
499
n
151
VAL
499
A
SER
500
n
152
SER
500
A
THR
501
n
153
THR
501
A
n
154
502
A
n
155
503
A
n
156
504
A
n
157
505
A
n
158
506
A
n
159
507
A
n
160
508
A
n
161
509
A
n
1
170
I
n
2
171
I
n
3
172
I
n
4
173
I
SER
174
n
5
SER
174
I
SER
175
n
6
SER
175
I
PRO
176
n
7
PRO
176
I
THR
177
n
8
THR
177
I
GLU
178
n
9
GLU
178
I
MET
179
n
10
MET
179
I
ASP
180
n
11
ASP
180
I
GLU
181
n
12
GLU
181
I
ASN
182
n
13
ASN
182
I
GLU
183
n
14
GLU
183
I
SER
184
n
15
SER
184
I
3.9559
0.1815
-1.7470
1.2684
-0.6185
6.1710
0.0566
0.2411
0.3392
0.2055
0.0336
0.1710
-0.6891
0.0393
-0.0664
0.4698
0.0037
-0.0071
0.2377
0.0234
0.3209
refined
16.3879
27.3430
-12.0524
X-RAY DIFFRACTION
3.6975
1.4121
-3.3178
0.8366
-2.2142
6.0391
-0.0589
-0.1018
-0.2891
0.0608
-0.0712
-0.1233
-0.1086
0.4305
0.1712
0.4555
-0.0136
0.0236
0.3019
-0.0314
0.3012
refined
12.5754
18.7164
-8.6114
X-RAY DIFFRACTION
3.0252
0.2747
-1.6947
2.5487
-3.8294
7.7606
-0.2796
-0.2773
-0.2917
0.0338
0.1027
-0.0338
0.2590
-0.2094
0.1860
0.4261
0.0041
0.0572
0.2386
-0.0131
0.2729
refined
5.8306
13.4332
-1.5571
X-RAY DIFFRACTION
3.5386
-0.0907
0.4844
4.2533
-1.9104
5.7425
-0.0128
-0.0269
-0.1924
-0.0762
0.0640
0.2529
0.4904
-0.3651
-0.0247
0.3376
0.0300
0.1058
0.2871
-0.0447
0.2774
refined
6.1087
15.4178
-9.2906
X-RAY DIFFRACTION
2.3530
0.8205
0.4204
3.2606
-2.5684
6.2797
-0.0289
0.0436
0.2126
0.1354
0.1321
0.3462
-0.4249
-0.2027
-0.1481
0.3905
0.0103
0.0684
0.2868
-0.0029
0.3177
refined
7.6368
24.4026
-16.9930
X-RAY DIFFRACTION
3.6935
-0.8303
0.1828
2.7731
-1.4930
3.7625
-0.3654
0.2185
0.6496
-0.5162
0.2391
-1.2137
-0.0842
1.9677
-0.2888
0.8934
0.0612
0.1161
0.7622
-0.1267
0.6633
refined
16.0332
9.4524
-10.8676
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 350 through 376 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 377 through 406 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 407 through 434 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 435 through 470 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 471 through 501 )
X-RAY DIFFRACTION
6
chain 'I' and (resid 174 through 184 )
author_and_software_defined_assembly
PISA
2
dimeric
none
1030
-1
8450
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TRP
355
A
N
TRP
7
A
O
VAL
495
A
O
VAL
147
A
O
SER
500
A
O
SER
152
A
N
THR
429
A
N
THR
81
A
N
ILE
434
A
N
ILE
86
A
O
HIS
446
A
O
HIS
98
A
N
ILE
375
A
N
ILE
27
A
O
LEU
393
A
O
LEU
45
A
O
LEU
389
A
O
LEU
41
A
N
PHE
380
A
N
PHE
32
A
N
ILE
375
A
N
ILE
27
A
O
LEU
393
A
O
LEU
45
A
N
ARG
392
A
N
ARG
44
A
O
PHE
410
A
O
PHE
62
A
N
ILE
407
A
N
ILE
59
A
O
MET
477
A
O
MET
129
A
N
GLY
470
A
N
GLY
122
I
O
MET
179
B
O
MET
10
1
A
NZ
LYS
356
A
NZ
LYS
8
1
Y
1
A
CE
LYS
365
A
CE
LYS
17
1
Y
1
A
NZ
LYS
365
A
NZ
LYS
17
1
Y
1
A
CG
GLN
401
A
CG
GLN
53
1
Y
1
A
CD
GLN
401
A
CD
GLN
53
1
Y
1
A
OE1
GLN
401
A
OE1
GLN
53
1
Y
1
A
NE2
GLN
401
A
NE2
GLN
53
1
Y
1
A
CG
ARG
402
A
CG
ARG
54
1
Y
1
A
CD
ARG
402
A
CD
ARG
54
1
Y
1
A
NE
ARG
402
A
NE
ARG
54
1
Y
1
A
CZ
ARG
402
A
CZ
ARG
54
1
Y
1
A
NH1
ARG
402
A
NH1
ARG
54
1
Y
1
A
NH2
ARG
402
A
NH2
ARG
54
1
Y
1
A
CG
GLU
439
A
CG
GLU
91
1
Y
1
A
CD
GLU
439
A
CD
GLU
91
1
Y
1
A
OE1
GLU
439
A
OE1
GLU
91
1
Y
1
A
OE2
GLU
439
A
OE2
GLU
91
1
Y
1
I
CG
MET
179
B
CG
MET
10
1
Y
1
I
SD
MET
179
B
SD
MET
10
1
Y
1
I
CE
MET
179
B
CE
MET
10
1
Y
1
I
CG
GLU
183
B
CG
GLU
14
1
Y
1
I
CD
GLU
183
B
CD
GLU
14
1
Y
1
I
OE1
GLU
183
B
OE1
GLU
14
1
Y
1
I
OE2
GLU
183
B
OE2
GLU
14
1
Y
1
I
CB
SER
184
B
CB
SER
15
1
Y
1
I
OG
SER
184
B
OG
SER
15
1
Y
1
A
MET
349
A
MET
1
1
Y
1
A
LEU
502
A
LEU
154
1
Y
1
A
GLU
503
A
GLU
155
1
Y
1
A
HIS
504
A
HIS
156
1
Y
1
A
HIS
505
A
HIS
157
1
Y
1
A
HIS
506
A
HIS
158
1
Y
1
A
HIS
507
A
HIS
159
1
Y
1
A
HIS
508
A
HIS
160
1
Y
1
A
HIS
509
A
HIS
161
1
Y
1
I
SER
170
B
SER
1
1
Y
1
I
SER
171
B
SER
2
1
Y
1
I
GLN
172
B
GLN
3
1
Y
1
I
SER
173
B
SER
4
1
Y
1
A
GLN
437
-90.77
30.92
1
A
THR
475
-110.84
60.57
0.2468
0.1937
0.1963
2.100
41.397
820
16399
5.00
98.42
0.23
1
FREE R-VALUE
1.34
MOLECULAR REPLACEMENT
25.09
0.90
1.11
5ZUJ
2.100
41.397
124
1421
0
0
1297
0.006
1339
0.845
1818
11.296
1103
0.054
196
0.005
237
0.2972
0.2493
2.2316
131
2518
98.00
0.3066
0.2245
2.4039
130
2463
98.00
0.2566
0.2223
2.6458
133
2523
98.00
0.2350
0.2067
3.0286
136
2578
98.00
0.3075
0.1825
3.8152
138
2615
99.00
0.2054
0.1795
41.4047
152
2882
100.00
40.85
2.1
41.4
6A33
16418
1
0.0198
0.0198
0.028
1
16.43
1.99963
98.40
0.3512
2.1
2.175
1576
0.827
0.3512
0.4967
1
2.0
97.4
data collection
Blu-Ice
data reduction
XDS
data scaling
XSCALE
refinement
PHENIX
1.12_2829
N
Binding and Enhanced Binding between Key Immunity Proteins TRAF6 and TIFA
1
N
N
2
N
N
3
N
N
3
N
N
A
ASN
359
A
ASN
11
HELX_P
A
GLU
369
A
GLU
21
1
AA1
11
A
TYR
418
A
TYR
70
HELX_P
A
LEU
422
A
LEU
74
5
AA2
5
A
GLU
439
A
GLU
91
HELX_P
A
ARG
443
A
ARG
95
5
AA3
5
A
LEU
456
A
LEU
108
HELX_P
A
GLN
460
A
GLN
112
5
AA4
5
A
GLU
480
A
GLU
132
HELX_P
A
GLN
484
A
GLN
136
5
AA5
5
PROTEIN BINDING
Complex, TRAF6, TIFA c-terminal consensus TRAF-binding peptide 170-184, Protein binding
A
LYS
384
A
LYS
36
1
A
PRO
385
A
PRO
37
10.27
A
TRP
424
A
TRP
76
1
A
PRO
425
A
PRO
77
0.36
TRAF6_HUMAN
UNP
1
350
Q9Y4K3
NGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGT
IRLTILDQSEAPVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVST
TIFA_HUMAN
UNP
2
170
Q96CG3
SSQSSSPTEMDENES
350
501
6A33
350
501
Q9Y4K3
A
1
2
153
170
184
6A33
170
184
Q96CG3
I
2
1
15
1
expression tag
MET
349
6A33
A
Q9Y4K3
UNP
1
1
expression tag
LEU
502
6A33
A
Q9Y4K3
UNP
154
1
expression tag
GLU
503
6A33
A
Q9Y4K3
UNP
155
1
expression tag
HIS
504
6A33
A
Q9Y4K3
UNP
156
1
expression tag
HIS
505
6A33
A
Q9Y4K3
UNP
157
1
expression tag
HIS
506
6A33
A
Q9Y4K3
UNP
158
1
expression tag
HIS
507
6A33
A
Q9Y4K3
UNP
159
1
expression tag
HIS
508
6A33
A
Q9Y4K3
UNP
160
1
expression tag
HIS
509
6A33
A
Q9Y4K3
UNP
161
4
3
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
351
A
GLY
3
A
ILE
357
A
ILE
9
A
LEU
493
A
LEU
145
A
SER
500
A
SER
152
A
THR
429
A
THR
81
A
ILE
434
A
ILE
86
A
HIS
446
A
HIS
98
A
ASP
451
A
ASP
103
A
VAL
373
A
VAL
25
A
HIS
376
A
HIS
28
A
LYS
388
A
LYS
40
A
LEU
395
A
LEU
47
A
PHE
380
A
PHE
32
A
TYR
381
A
TYR
33
A
VAL
373
A
VAL
25
A
HIS
376
A
HIS
28
A
LYS
388
A
LYS
40
A
LEU
395
A
LEU
47
A
TYR
406
A
TYR
58
A
MET
414
A
MET
66
A
LYS
469
A
LYS
121
A
HIS
478
A
HIS
130
I
THR
177
B
THR
8
I
ASP
180
B
ASP
11
178
P 61 2 2