0.018629
0.000000
0.000961
0.000000
0.014625
0.000000
0.000000
0.000000
0.017655
0.000000
0.000000
0.000000
Fang, J.
Lu, G.
0000-0002-8264-7523
Gong, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.000
92.950
90.000
53.681
68.376
56.717
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
MN
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
N
C
N
338
N
O
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
R
C
N
352
N
O
N
353
N
C
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
C
Y
372
N
N
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
N
394
N
O
N
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
N
402
N
O
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
N
420
N
C
N
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
US
ACS Infect Dis
2373-8227
5
177
183
10.1021/acsinfecdis.8b00214
30672289
Crystallographic Snapshots of the Zika Virus NS3 Helicase Help Visualize the Reactant Water Replenishment.
2019
0000-0002-8264-7523
10.2210/pdb6ady/pdb
pdb_00006ady
100
1
CCD
2016-05-14
ADSC QUANTUM 315r
SINGLE WAVELENGTH
M
x-ray
1
0.9792
1.0
BL17U1
SSRF
0.9792
SYNCHROTRON
SSRF BEAMLINE BL17U1
50412.555
Serine protease NS3
3.4.21.91, 3.6.1.15, 3.6.4.13
1
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
54.938
MANGANESE (II) ION
1
syn
non-polymer
18.015
water
271
nat
water
no
no
MHHHHHHSSSGPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKKRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVN
VTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLNIMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDS
NSPIMDTEVEVPERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKNQEWDFVITT
DISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYMYGGGCAETDEGHAHWLE
ARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNN
TIMEDSVPAEVWTKYGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKR
MHHHHHHSSSGPSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKKRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVN
VTHSGTEIVDLMCHATFTSRLLQPIRVPNYNLNIMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDS
NSPIMDTEVEVPERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKNQEWDFVITT
DISEMGANFKADRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYMYGGGCAETDEGHAHWLE
ARMLLDNIYLQDGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNN
TIMEDSVPAEVWTKYGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ZIKV
Mr 766
sample
1
448
64320
Zika virus (strain Mr 766)
562
Escherichia coli
BL21-CodonPlus(DE3)-RIL
plasmid
Biological sequence
pET26b
1
2.06
40.35
VAPOR DIFFUSION, HANGING DROP
7.5
PEG3350, lithium sulfate
289
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
repository
Initial release
Data collection
Database references
Derived calculations
Refinement description
1
0
2019-03-13
1
1
2023-11-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
China
Natural Science Foundation of Guangdong Province of China
2016A030310249
N
PDBJ
Y
PDBJ
2018-08-02
REL
REL
ADP
ADP
SUBJECT OF INVESTIGATION
MN
MN
SUBJECT OF INVESTIGATION
ADP
ADENOSINE-5'-DIPHOSPHATE
MN
MANGANESE (II) ION
HOH
water
2VBC
PDB
experimental model
ADP
1
2
ADP
ADP
701
A
MN
1
3
MN
MN
702
A
HOH
125
4
HOH
HOH
801
A
HOH
19
4
HOH
HOH
802
A
HOH
43
4
HOH
HOH
803
A
HOH
2
4
HOH
HOH
804
A
HOH
61
4
HOH
HOH
805
A
HOH
257
4
HOH
HOH
806
A
HOH
235
4
HOH
HOH
807
A
HOH
7
4
HOH
HOH
808
A
HOH
94
4
HOH
HOH
809
A
HOH
40
4
HOH
HOH
810
A
HOH
166
4
HOH
HOH
811
A
HOH
101
4
HOH
HOH
812
A
HOH
115
4
HOH
HOH
813
A
HOH
26
4
HOH
HOH
814
A
HOH
265
4
HOH
HOH
815
A
HOH
60
4
HOH
HOH
816
A
HOH
76
4
HOH
HOH
817
A
HOH
90
4
HOH
HOH
818
A
HOH
199
4
HOH
HOH
819
A
HOH
161
4
HOH
HOH
820
A
HOH
25
4
HOH
HOH
821
A
HOH
280
4
HOH
HOH
822
A
HOH
168
4
HOH
HOH
823
A
HOH
262
4
HOH
HOH
824
A
HOH
158
4
HOH
HOH
825
A
HOH
267
4
HOH
HOH
826
A
HOH
211
4
HOH
HOH
827
A
HOH
147
4
HOH
HOH
828
A
HOH
79
4
HOH
HOH
829
A
HOH
58
4
HOH
HOH
830
A
HOH
54
4
HOH
HOH
831
A
HOH
236
4
HOH
HOH
832
A
HOH
109
4
HOH
HOH
833
A
HOH
193
4
HOH
HOH
834
A
HOH
227
4
HOH
HOH
835
A
HOH
292
4
HOH
HOH
836
A
HOH
270
4
HOH
HOH
837
A
HOH
137
4
HOH
HOH
838
A
HOH
179
4
HOH
HOH
839
A
HOH
216
4
HOH
HOH
840
A
HOH
20
4
HOH
HOH
841
A
HOH
42
4
HOH
HOH
842
A
HOH
238
4
HOH
HOH
843
A
HOH
73
4
HOH
HOH
844
A
HOH
27
4
HOH
HOH
845
A
HOH
188
4
HOH
HOH
846
A
HOH
142
4
HOH
HOH
847
A
HOH
251
4
HOH
HOH
848
A
HOH
12
4
HOH
HOH
849
A
HOH
105
4
HOH
HOH
850
A
HOH
18
4
HOH
HOH
851
A
HOH
213
4
HOH
HOH
852
A
HOH
201
4
HOH
HOH
853
A
HOH
163
4
HOH
HOH
854
A
HOH
214
4
HOH
HOH
855
A
HOH
17
4
HOH
HOH
856
A
HOH
207
4
HOH
HOH
857
A
HOH
186
4
HOH
HOH
858
A
HOH
32
4
HOH
HOH
859
A
HOH
53
4
HOH
HOH
860
A
HOH
177
4
HOH
HOH
861
A
HOH
282
4
HOH
HOH
862
A
HOH
266
4
HOH
HOH
863
A
HOH
68
4
HOH
HOH
864
A
HOH
146
4
HOH
HOH
865
A
HOH
77
4
HOH
HOH
866
A
HOH
145
4
HOH
HOH
867
A
HOH
47
4
HOH
HOH
868
A
HOH
64
4
HOH
HOH
869
A
HOH
276
4
HOH
HOH
870
A
HOH
16
4
HOH
HOH
871
A
HOH
192
4
HOH
HOH
872
A
HOH
195
4
HOH
HOH
873
A
HOH
150
4
HOH
HOH
874
A
HOH
134
4
HOH
HOH
875
A
HOH
130
4
HOH
HOH
876
A
HOH
14
4
HOH
HOH
877
A
HOH
4
4
HOH
HOH
878
A
HOH
223
4
HOH
HOH
879
A
HOH
116
4
HOH
HOH
880
A
HOH
81
4
HOH
HOH
881
A
HOH
92
4
HOH
HOH
882
A
HOH
56
4
HOH
HOH
883
A
HOH
104
4
HOH
HOH
884
A
HOH
210
4
HOH
HOH
885
A
HOH
133
4
HOH
HOH
886
A
HOH
205
4
HOH
HOH
887
A
HOH
13
4
HOH
HOH
888
A
HOH
107
4
HOH
HOH
889
A
HOH
63
4
HOH
HOH
890
A
HOH
121
4
HOH
HOH
891
A
HOH
152
4
HOH
HOH
892
A
HOH
117
4
HOH
HOH
893
A
HOH
78
4
HOH
HOH
894
A
HOH
128
4
HOH
HOH
895
A
HOH
119
4
HOH
HOH
896
A
HOH
30
4
HOH
HOH
897
A
HOH
22
4
HOH
HOH
898
A
HOH
50
4
HOH
HOH
899
A
HOH
71
4
HOH
HOH
900
A
HOH
176
4
HOH
HOH
901
A
HOH
62
4
HOH
HOH
902
A
HOH
10
4
HOH
HOH
903
A
HOH
269
4
HOH
HOH
904
A
HOH
33
4
HOH
HOH
905
A
HOH
254
4
HOH
HOH
906
A
HOH
57
4
HOH
HOH
907
A
HOH
75
4
HOH
HOH
908
A
HOH
106
4
HOH
HOH
909
A
HOH
124
4
HOH
HOH
910
A
HOH
203
4
HOH
HOH
911
A
HOH
36
4
HOH
HOH
912
A
HOH
8
4
HOH
HOH
913
A
HOH
231
4
HOH
HOH
914
A
HOH
187
4
HOH
HOH
915
A
HOH
41
4
HOH
HOH
916
A
HOH
243
4
HOH
HOH
917
A
HOH
159
4
HOH
HOH
918
A
HOH
46
4
HOH
HOH
919
A
HOH
24
4
HOH
HOH
920
A
HOH
45
4
HOH
HOH
921
A
HOH
6
4
HOH
HOH
922
A
HOH
120
4
HOH
HOH
923
A
HOH
5
4
HOH
HOH
924
A
HOH
1
4
HOH
HOH
925
A
HOH
91
4
HOH
HOH
926
A
HOH
209
4
HOH
HOH
927
A
HOH
29
4
HOH
HOH
928
A
HOH
191
4
HOH
HOH
929
A
HOH
138
4
HOH
HOH
930
A
HOH
217
4
HOH
HOH
931
A
HOH
245
4
HOH
HOH
932
A
HOH
139
4
HOH
HOH
933
A
HOH
148
4
HOH
HOH
934
A
HOH
112
4
HOH
HOH
935
A
HOH
110
4
HOH
HOH
936
A
HOH
275
4
HOH
HOH
937
A
HOH
89
4
HOH
HOH
938
A
HOH
52
4
HOH
HOH
939
A
HOH
239
4
HOH
HOH
940
A
HOH
122
4
HOH
HOH
941
A
HOH
3
4
HOH
HOH
942
A
HOH
256
4
HOH
HOH
943
A
HOH
9
4
HOH
HOH
944
A
HOH
86
4
HOH
HOH
945
A
HOH
170
4
HOH
HOH
946
A
HOH
55
4
HOH
HOH
947
A
HOH
271
4
HOH
HOH
948
A
HOH
151
4
HOH
HOH
949
A
HOH
212
4
HOH
HOH
950
A
HOH
174
4
HOH
HOH
951
A
HOH
277
4
HOH
HOH
952
A
HOH
111
4
HOH
HOH
953
A
HOH
206
4
HOH
HOH
954
A
HOH
204
4
HOH
HOH
955
A
HOH
11
4
HOH
HOH
956
A
HOH
96
4
HOH
HOH
957
A
HOH
287
4
HOH
HOH
958
A
HOH
232
4
HOH
HOH
959
A
HOH
23
4
HOH
HOH
960
A
HOH
202
4
HOH
HOH
961
A
HOH
108
4
HOH
HOH
962
A
HOH
31
4
HOH
HOH
963
A
HOH
259
4
HOH
HOH
964
A
HOH
200
4
HOH
HOH
965
A
HOH
162
4
HOH
HOH
966
A
HOH
263
4
HOH
HOH
967
A
HOH
284
4
HOH
HOH
968
A
HOH
67
4
HOH
HOH
969
A
HOH
37
4
HOH
HOH
970
A
HOH
194
4
HOH
HOH
971
A
HOH
72
4
HOH
HOH
972
A
HOH
157
4
HOH
HOH
973
A
HOH
88
4
HOH
HOH
974
A
HOH
219
4
HOH
HOH
975
A
HOH
182
4
HOH
HOH
976
A
HOH
164
4
HOH
HOH
977
A
HOH
98
4
HOH
HOH
978
A
HOH
113
4
HOH
HOH
979
A
HOH
165
4
HOH
HOH
980
A
HOH
129
4
HOH
HOH
981
A
HOH
225
4
HOH
HOH
982
A
HOH
247
4
HOH
HOH
983
A
HOH
100
4
HOH
HOH
984
A
HOH
140
4
HOH
HOH
985
A
HOH
49
4
HOH
HOH
986
A
HOH
103
4
HOH
HOH
987
A
HOH
228
4
HOH
HOH
988
A
HOH
51
4
HOH
HOH
989
A
HOH
285
4
HOH
HOH
990
A
HOH
264
4
HOH
HOH
991
A
HOH
97
4
HOH
HOH
992
A
HOH
171
4
HOH
HOH
993
A
HOH
74
4
HOH
HOH
994
A
HOH
255
4
HOH
HOH
995
A
HOH
274
4
HOH
HOH
996
A
HOH
127
4
HOH
HOH
997
A
HOH
289
4
HOH
HOH
998
A
HOH
234
4
HOH
HOH
999
A
HOH
70
4
HOH
HOH
1000
A
HOH
197
4
HOH
HOH
1001
A
HOH
123
4
HOH
HOH
1002
A
HOH
155
4
HOH
HOH
1003
A
HOH
93
4
HOH
HOH
1004
A
HOH
181
4
HOH
HOH
1005
A
HOH
131
4
HOH
HOH
1006
A
HOH
196
4
HOH
HOH
1007
A
HOH
293
4
HOH
HOH
1008
A
HOH
279
4
HOH
HOH
1009
A
HOH
218
4
HOH
HOH
1010
A
HOH
15
4
HOH
HOH
1011
A
HOH
224
4
HOH
HOH
1012
A
HOH
44
4
HOH
HOH
1013
A
HOH
273
4
HOH
HOH
1014
A
HOH
248
4
HOH
HOH
1015
A
HOH
48
4
HOH
HOH
1016
A
HOH
240
4
HOH
HOH
1017
A
HOH
80
4
HOH
HOH
1018
A
HOH
260
4
HOH
HOH
1019
A
HOH
118
4
HOH
HOH
1020
A
HOH
291
4
HOH
HOH
1021
A
HOH
69
4
HOH
HOH
1022
A
HOH
156
4
HOH
HOH
1023
A
HOH
184
4
HOH
HOH
1024
A
HOH
144
4
HOH
HOH
1025
A
HOH
283
4
HOH
HOH
1026
A
HOH
99
4
HOH
HOH
1027
A
HOH
220
4
HOH
HOH
1028
A
HOH
87
4
HOH
HOH
1029
A
HOH
233
4
HOH
HOH
1030
A
HOH
261
4
HOH
HOH
1031
A
HOH
141
4
HOH
HOH
1032
A
HOH
38
4
HOH
HOH
1033
A
HOH
66
4
HOH
HOH
1034
A
HOH
154
4
HOH
HOH
1035
A
HOH
230
4
HOH
HOH
1036
A
HOH
268
4
HOH
HOH
1037
A
HOH
82
4
HOH
HOH
1038
A
HOH
189
4
HOH
HOH
1039
A
HOH
84
4
HOH
HOH
1040
A
HOH
252
4
HOH
HOH
1041
A
HOH
242
4
HOH
HOH
1042
A
HOH
167
4
HOH
HOH
1043
A
HOH
169
4
HOH
HOH
1044
A
HOH
246
4
HOH
HOH
1045
A
HOH
288
4
HOH
HOH
1046
A
HOH
258
4
HOH
HOH
1047
A
HOH
95
4
HOH
HOH
1048
A
HOH
294
4
HOH
HOH
1049
A
HOH
126
4
HOH
HOH
1050
A
HOH
208
4
HOH
HOH
1051
A
HOH
135
4
HOH
HOH
1052
A
HOH
34
4
HOH
HOH
1053
A
HOH
198
4
HOH
HOH
1054
A
HOH
175
4
HOH
HOH
1055
A
HOH
249
4
HOH
HOH
1056
A
HOH
136
4
HOH
HOH
1057
A
HOH
253
4
HOH
HOH
1058
A
HOH
281
4
HOH
HOH
1059
A
HOH
241
4
HOH
HOH
1060
A
HOH
183
4
HOH
HOH
1061
A
HOH
21
4
HOH
HOH
1062
A
HOH
132
4
HOH
HOH
1063
A
HOH
172
4
HOH
HOH
1064
A
HOH
215
4
HOH
HOH
1065
A
HOH
173
4
HOH
HOH
1066
A
HOH
153
4
HOH
HOH
1067
A
HOH
272
4
HOH
HOH
1068
A
HOH
65
4
HOH
HOH
1069
A
HOH
250
4
HOH
HOH
1070
A
HOH
143
4
HOH
HOH
1071
A
n
1
170
A
n
2
171
A
n
3
172
A
n
4
173
A
n
5
174
A
n
6
175
A
n
7
176
A
n
8
177
A
n
9
178
A
n
10
179
A
n
11
180
A
n
12
181
A
n
13
182
A
n
14
183
A
n
15
184
A
LYS
185
n
16
LYS
185
A
LYS
186
n
17
LYS
186
A
LYS
187
n
18
LYS
187
A
GLN
188
n
19
GLN
188
A
LEU
189
n
20
LEU
189
A
THR
190
n
21
THR
190
A
VAL
191
n
22
VAL
191
A
LEU
192
n
23
LEU
192
A
ASP
193
n
24
ASP
193
A
LEU
194
n
25
LEU
194
A
HIS
195
n
26
HIS
195
A
PRO
196
n
27
PRO
196
A
GLY
197
n
28
GLY
197
A
ALA
198
n
29
ALA
198
A
GLY
199
n
30
GLY
199
A
LYS
200
n
31
LYS
200
A
THR
201
n
32
THR
201
A
ARG
202
n
33
ARG
202
A
ARG
203
n
34
ARG
203
A
VAL
204
n
35
VAL
204
A
LEU
205
n
36
LEU
205
A
PRO
206
n
37
PRO
206
A
GLU
207
n
38
GLU
207
A
ILE
208
n
39
ILE
208
A
VAL
209
n
40
VAL
209
A
ARG
210
n
41
ARG
210
A
GLU
211
n
42
GLU
211
A
ALA
212
n
43
ALA
212
A
ILE
213
n
44
ILE
213
A
LYS
214
n
45
LYS
214
A
LYS
215
n
46
LYS
215
A
ARG
216
n
47
ARG
216
A
LEU
217
n
48
LEU
217
A
ARG
218
n
49
ARG
218
A
THR
219
n
50
THR
219
A
VAL
220
n
51
VAL
220
A
ILE
221
n
52
ILE
221
A
LEU
222
n
53
LEU
222
A
ALA
223
n
54
ALA
223
A
PRO
224
n
55
PRO
224
A
THR
225
n
56
THR
225
A
ARG
226
n
57
ARG
226
A
VAL
227
n
58
VAL
227
A
VAL
228
n
59
VAL
228
A
ALA
229
n
60
ALA
229
A
ALA
230
n
61
ALA
230
A
GLU
231
n
62
GLU
231
A
MET
232
n
63
MET
232
A
GLU
233
n
64
GLU
233
A
GLU
234
n
65
GLU
234
A
ALA
235
n
66
ALA
235
A
LEU
236
n
67
LEU
236
A
ARG
237
n
68
ARG
237
A
GLY
238
n
69
GLY
238
A
LEU
239
n
70
LEU
239
A
PRO
240
n
71
PRO
240
A
VAL
241
n
72
VAL
241
A
ARG
242
n
73
ARG
242
A
TYR
243
n
74
TYR
243
A
MET
244
n
75
MET
244
A
THR
245
n
76
THR
245
A
THR
246
n
77
THR
246
A
ALA
247
n
78
ALA
247
A
VAL
248
n
79
VAL
248
A
ASN
249
n
80
ASN
249
A
VAL
250
n
81
VAL
250
A
n
82
251
A
n
83
252
A
n
84
253
A
n
85
254
A
n
86
255
A
GLU
256
n
87
GLU
256
A
ILE
257
n
88
ILE
257
A
VAL
258
n
89
VAL
258
A
ASP
259
n
90
ASP
259
A
LEU
260
n
91
LEU
260
A
MET
261
n
92
MET
261
A
CYS
262
n
93
CYS
262
A
HIS
263
n
94
HIS
263
A
ALA
264
n
95
ALA
264
A
THR
265
n
96
THR
265
A
PHE
266
n
97
PHE
266
A
THR
267
n
98
THR
267
A
SER
268
n
99
SER
268
A
ARG
269
n
100
ARG
269
A
LEU
270
n
101
LEU
270
A
LEU
271
n
102
LEU
271
A
GLN
272
n
103
GLN
272
A
PRO
273
n
104
PRO
273
A
ILE
274
n
105
ILE
274
A
ARG
275
n
106
ARG
275
A
VAL
276
n
107
VAL
276
A
PRO
277
n
108
PRO
277
A
ASN
278
n
109
ASN
278
A
TYR
279
n
110
TYR
279
A
ASN
280
n
111
ASN
280
A
LEU
281
n
112
LEU
281
A
ASN
282
n
113
ASN
282
A
ILE
283
n
114
ILE
283
A
MET
284
n
115
MET
284
A
ASP
285
n
116
ASP
285
A
GLU
286
n
117
GLU
286
A
ALA
287
n
118
ALA
287
A
HIS
288
n
119
HIS
288
A
PHE
289
n
120
PHE
289
A
THR
290
n
121
THR
290
A
ASP
291
n
122
ASP
291
A
PRO
292
n
123
PRO
292
A
SER
293
n
124
SER
293
A
SER
294
n
125
SER
294
A
ILE
295
n
126
ILE
295
A
ALA
296
n
127
ALA
296
A
ALA
297
n
128
ALA
297
A
ARG
298
n
129
ARG
298
A
GLY
299
n
130
GLY
299
A
TYR
300
n
131
TYR
300
A
ILE
301
n
132
ILE
301
A
SER
302
n
133
SER
302
A
THR
303
n
134
THR
303
A
ARG
304
n
135
ARG
304
A
VAL
305
n
136
VAL
305
A
GLU
306
n
137
GLU
306
A
MET
307
n
138
MET
307
A
GLY
308
n
139
GLY
308
A
GLU
309
n
140
GLU
309
A
ALA
310
n
141
ALA
310
A
ALA
311
n
142
ALA
311
A
ALA
312
n
143
ALA
312
A
ILE
313
n
144
ILE
313
A
PHE
314
n
145
PHE
314
A
MET
315
n
146
MET
315
A
THR
316
n
147
THR
316
A
ALA
317
n
148
ALA
317
A
THR
318
n
149
THR
318
A
PRO
319
n
150
PRO
319
A
PRO
320
n
151
PRO
320
A
GLY
321
n
152
GLY
321
A
THR
322
n
153
THR
322
A
ARG
323
n
154
ARG
323
A
ASP
324
n
155
ASP
324
A
ALA
325
n
156
ALA
325
A
PHE
326
n
157
PHE
326
A
PRO
327
n
158
PRO
327
A
ASP
328
n
159
ASP
328
A
SER
329
n
160
SER
329
A
ASN
330
n
161
ASN
330
A
SER
331
n
162
SER
331
A
PRO
332
n
163
PRO
332
A
ILE
333
n
164
ILE
333
A
MET
334
n
165
MET
334
A
ASP
335
n
166
ASP
335
A
THR
336
n
167
THR
336
A
GLU
337
n
168
GLU
337
A
VAL
338
n
169
VAL
338
A
GLU
339
n
170
GLU
339
A
VAL
340
n
171
VAL
340
A
PRO
341
n
172
PRO
341
A
GLU
342
n
173
GLU
342
A
ARG
343
n
174
ARG
343
A
ALA
344
n
175
ALA
344
A
TRP
345
n
176
TRP
345
A
SER
346
n
177
SER
346
A
SER
347
n
178
SER
347
A
GLY
348
n
179
GLY
348
A
PHE
349
n
180
PHE
349
A
ASP
350
n
181
ASP
350
A
TRP
351
n
182
TRP
351
A
VAL
352
n
183
VAL
352
A
THR
353
n
184
THR
353
A
ASP
354
n
185
ASP
354
A
HIS
355
n
186
HIS
355
A
SER
356
n
187
SER
356
A
GLY
357
n
188
GLY
357
A
LYS
358
n
189
LYS
358
A
THR
359
n
190
THR
359
A
VAL
360
n
191
VAL
360
A
TRP
361
n
192
TRP
361
A
PHE
362
n
193
PHE
362
A
VAL
363
n
194
VAL
363
A
PRO
364
n
195
PRO
364
A
SER
365
n
196
SER
365
A
VAL
366
n
197
VAL
366
A
ARG
367
n
198
ARG
367
A
ASN
368
n
199
ASN
368
A
GLY
369
n
200
GLY
369
A
ASN
370
n
201
ASN
370
A
GLU
371
n
202
GLU
371
A
ILE
372
n
203
ILE
372
A
ALA
373
n
204
ALA
373
A
ALA
374
n
205
ALA
374
A
CYS
375
n
206
CYS
375
A
LEU
376
n
207
LEU
376
A
THR
377
n
208
THR
377
A
LYS
378
n
209
LYS
378
A
ALA
379
n
210
ALA
379
A
GLY
380
n
211
GLY
380
A
LYS
381
n
212
LYS
381
A
ARG
382
n
213
ARG
382
A
VAL
383
n
214
VAL
383
A
ILE
384
n
215
ILE
384
A
GLN
385
n
216
GLN
385
A
LEU
386
n
217
LEU
386
A
SER
387
n
218
SER
387
A
ARG
388
n
219
ARG
388
A
LYS
389
n
220
LYS
389
A
THR
390
n
221
THR
390
A
PHE
391
n
222
PHE
391
A
GLU
392
n
223
GLU
392
A
THR
393
n
224
THR
393
A
GLU
394
n
225
GLU
394
A
PHE
395
n
226
PHE
395
A
GLN
396
n
227
GLN
396
A
LYS
397
n
228
LYS
397
A
THR
398
n
229
THR
398
A
LYS
399
n
230
LYS
399
A
ASN
400
n
231
ASN
400
A
GLN
401
n
232
GLN
401
A
GLU
402
n
233
GLU
402
A
TRP
403
n
234
TRP
403
A
ASP
404
n
235
ASP
404
A
PHE
405
n
236
PHE
405
A
VAL
406
n
237
VAL
406
A
ILE
407
n
238
ILE
407
A
THR
408
n
239
THR
408
A
THR
409
n
240
THR
409
A
ASP
410
n
241
ASP
410
A
ILE
411
n
242
ILE
411
A
SER
412
n
243
SER
412
A
GLU
413
n
244
GLU
413
A
MET
414
n
245
MET
414
A
GLY
415
n
246
GLY
415
A
ALA
416
n
247
ALA
416
A
ASN
417
n
248
ASN
417
A
PHE
418
n
249
PHE
418
A
LYS
419
n
250
LYS
419
A
ALA
420
n
251
ALA
420
A
ASP
421
n
252
ASP
421
A
ARG
422
n
253
ARG
422
A
VAL
423
n
254
VAL
423
A
ILE
424
n
255
ILE
424
A
ASP
425
n
256
ASP
425
A
SER
426
n
257
SER
426
A
ARG
427
n
258
ARG
427
A
ARG
428
n
259
ARG
428
A
CYS
429
n
260
CYS
429
A
LEU
430
n
261
LEU
430
A
LYS
431
n
262
LYS
431
A
PRO
432
n
263
PRO
432
A
VAL
433
n
264
VAL
433
A
ILE
434
n
265
ILE
434
A
LEU
435
n
266
LEU
435
A
ASP
436
n
267
ASP
436
A
GLY
437
n
268
GLY
437
A
GLU
438
n
269
GLU
438
A
ARG
439
n
270
ARG
439
A
VAL
440
n
271
VAL
440
A
ILE
441
n
272
ILE
441
A
LEU
442
n
273
LEU
442
A
ALA
443
n
274
ALA
443
A
GLY
444
n
275
GLY
444
A
PRO
445
n
276
PRO
445
A
MET
446
n
277
MET
446
A
PRO
447
n
278
PRO
447
A
VAL
448
n
279
VAL
448
A
THR
449
n
280
THR
449
A
HIS
450
n
281
HIS
450
A
ALA
451
n
282
ALA
451
A
SER
452
n
283
SER
452
A
ALA
453
n
284
ALA
453
A
ALA
454
n
285
ALA
454
A
GLN
455
n
286
GLN
455
A
ARG
456
n
287
ARG
456
A
ARG
457
n
288
ARG
457
A
GLY
458
n
289
GLY
458
A
ARG
459
n
290
ARG
459
A
ILE
460
n
291
ILE
460
A
GLY
461
n
292
GLY
461
A
ARG
462
n
293
ARG
462
A
ASN
463
n
294
ASN
463
A
PRO
464
n
295
PRO
464
A
ASN
465
n
296
ASN
465
A
LYS
466
n
297
LYS
466
A
PRO
467
n
298
PRO
467
A
GLY
468
n
299
GLY
468
A
ASP
469
n
300
ASP
469
A
GLU
470
n
301
GLU
470
A
TYR
471
n
302
TYR
471
A
MET
472
n
303
MET
472
A
TYR
473
n
304
TYR
473
A
GLY
474
n
305
GLY
474
A
GLY
475
n
306
GLY
475
A
GLY
476
n
307
GLY
476
A
CYS
477
n
308
CYS
477
A
ALA
478
n
309
ALA
478
A
GLU
479
n
310
GLU
479
A
THR
480
n
311
THR
480
A
ASP
481
n
312
ASP
481
A
GLU
482
n
313
GLU
482
A
GLY
483
n
314
GLY
483
A
HIS
484
n
315
HIS
484
A
ALA
485
n
316
ALA
485
A
HIS
486
n
317
HIS
486
A
TRP
487
n
318
TRP
487
A
LEU
488
n
319
LEU
488
A
GLU
489
n
320
GLU
489
A
ALA
490
n
321
ALA
490
A
ARG
491
n
322
ARG
491
A
MET
492
n
323
MET
492
A
LEU
493
n
324
LEU
493
A
LEU
494
n
325
LEU
494
A
ASP
495
n
326
ASP
495
A
ASN
496
n
327
ASN
496
A
ILE
497
n
328
ILE
497
A
TYR
498
n
329
TYR
498
A
LEU
499
n
330
LEU
499
A
GLN
500
n
331
GLN
500
A
ASP
501
n
332
ASP
501
A
GLY
502
n
333
GLY
502
A
LEU
503
n
334
LEU
503
A
ILE
504
n
335
ILE
504
A
ALA
505
n
336
ALA
505
A
SER
506
n
337
SER
506
A
LEU
507
n
338
LEU
507
A
TYR
508
n
339
TYR
508
A
ARG
509
n
340
ARG
509
A
PRO
510
n
341
PRO
510
A
GLU
511
n
342
GLU
511
A
ALA
512
n
343
ALA
512
A
ASP
513
n
344
ASP
513
A
LYS
514
n
345
LYS
514
A
VAL
515
n
346
VAL
515
A
ALA
516
n
347
ALA
516
A
ALA
517
n
348
ALA
517
A
ILE
518
n
349
ILE
518
A
GLU
519
n
350
GLU
519
A
GLY
520
n
351
GLY
520
A
GLU
521
n
352
GLU
521
A
PHE
522
n
353
PHE
522
A
LYS
523
n
354
LYS
523
A
LEU
524
n
355
LEU
524
A
ARG
525
n
356
ARG
525
A
THR
526
n
357
THR
526
A
GLU
527
n
358
GLU
527
A
GLN
528
n
359
GLN
528
A
ARG
529
n
360
ARG
529
A
LYS
530
n
361
LYS
530
A
THR
531
n
362
THR
531
A
PHE
532
n
363
PHE
532
A
VAL
533
n
364
VAL
533
A
GLU
534
n
365
GLU
534
A
LEU
535
n
366
LEU
535
A
MET
536
n
367
MET
536
A
LYS
537
n
368
LYS
537
A
ARG
538
n
369
ARG
538
A
GLY
539
n
370
GLY
539
A
ASP
540
n
371
ASP
540
A
LEU
541
n
372
LEU
541
A
PRO
542
n
373
PRO
542
A
VAL
543
n
374
VAL
543
A
TRP
544
n
375
TRP
544
A
LEU
545
n
376
LEU
545
A
ALA
546
n
377
ALA
546
A
TYR
547
n
378
TYR
547
A
GLN
548
n
379
GLN
548
A
VAL
549
n
380
VAL
549
A
ALA
550
n
381
ALA
550
A
SER
551
n
382
SER
551
A
ALA
552
n
383
ALA
552
A
GLY
553
n
384
GLY
553
A
ILE
554
n
385
ILE
554
A
THR
555
n
386
THR
555
A
TYR
556
n
387
TYR
556
A
THR
557
n
388
THR
557
A
ASP
558
n
389
ASP
558
A
ARG
559
n
390
ARG
559
A
ARG
560
n
391
ARG
560
A
TRP
561
n
392
TRP
561
A
CYS
562
n
393
CYS
562
A
PHE
563
n
394
PHE
563
A
ASP
564
n
395
ASP
564
A
GLY
565
n
396
GLY
565
A
THR
566
n
397
THR
566
A
THR
567
n
398
THR
567
A
ASN
568
n
399
ASN
568
A
ASN
569
n
400
ASN
569
A
THR
570
n
401
THR
570
A
ILE
571
n
402
ILE
571
A
MET
572
n
403
MET
572
A
GLU
573
n
404
GLU
573
A
ASP
574
n
405
ASP
574
A
SER
575
n
406
SER
575
A
VAL
576
n
407
VAL
576
A
PRO
577
n
408
PRO
577
A
ALA
578
n
409
ALA
578
A
GLU
579
n
410
GLU
579
A
VAL
580
n
411
VAL
580
A
TRP
581
n
412
TRP
581
A
THR
582
n
413
THR
582
A
LYS
583
n
414
LYS
583
A
TYR
584
n
415
TYR
584
A
GLY
585
n
416
GLY
585
A
GLU
586
n
417
GLU
586
A
LYS
587
n
418
LYS
587
A
ARG
588
n
419
ARG
588
A
VAL
589
n
420
VAL
589
A
LEU
590
n
421
LEU
590
A
LYS
591
n
422
LYS
591
A
PRO
592
n
423
PRO
592
A
ARG
593
n
424
ARG
593
A
TRP
594
n
425
TRP
594
A
MET
595
n
426
MET
595
A
ASP
596
n
427
ASP
596
A
ALA
597
n
428
ALA
597
A
ARG
598
n
429
ARG
598
A
VAL
599
n
430
VAL
599
A
CYS
600
n
431
CYS
600
A
SER
601
n
432
SER
601
A
ASP
602
n
433
ASP
602
A
HIS
603
n
434
HIS
603
A
ALA
604
n
435
ALA
604
A
ALA
605
n
436
ALA
605
A
LEU
606
n
437
LEU
606
A
LYS
607
n
438
LYS
607
A
SER
608
n
439
SER
608
A
PHE
609
n
440
PHE
609
A
LYS
610
n
441
LYS
610
A
GLU
611
n
442
GLU
611
A
PHE
612
n
443
PHE
612
A
ALA
613
n
444
ALA
613
A
ALA
614
n
445
ALA
614
A
GLY
615
n
446
GLY
615
A
LYS
616
n
447
LYS
616
A
ARG
617
n
448
ARG
617
A
author_and_software_defined_assembly
PISA
1
monomeric
gel filtration
570
-6
18830
A
THR
201
A
OG1
THR
32
1_555
A
MN
702
C
MN
MN
1_555
A
GLU
286
A
OE2
GLU
117
1_555
100.0
A
THR
201
A
OG1
THR
32
1_555
A
MN
702
C
MN
MN
1_555
A
ADP
701
B
O1B
ADP
1_555
89.7
A
GLU
286
A
OE2
GLU
117
1_555
A
MN
702
C
MN
MN
1_555
A
ADP
701
B
O1B
ADP
1_555
169.4
A
THR
201
A
OG1
THR
32
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
818
D
O
HOH
1_555
87.5
A
GLU
286
A
OE2
GLU
117
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
818
D
O
HOH
1_555
96.2
A
ADP
701
B
O1B
ADP
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
818
D
O
HOH
1_555
79.7
A
THR
201
A
OG1
THR
32
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
851
D
O
HOH
1_555
95.1
A
GLU
286
A
OE2
GLU
117
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
851
D
O
HOH
1_555
79.7
A
ADP
701
B
O1B
ADP
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
851
D
O
HOH
1_555
103.9
A
HOH
818
D
O
HOH
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
851
D
O
HOH
1_555
175.5
A
THR
201
A
OG1
THR
32
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
890
D
O
HOH
1_555
175.3
A
GLU
286
A
OE2
GLU
117
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
890
D
O
HOH
1_555
79.2
A
ADP
701
B
O1B
ADP
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
890
D
O
HOH
1_555
90.8
A
HOH
818
D
O
HOH
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
890
D
O
HOH
1_555
88.0
A
HOH
851
D
O
HOH
1_555
A
MN
702
C
MN
MN
1_555
A
HOH
890
D
O
HOH
1_555
89.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
190
A
N
THR
21
A
O
PHE
314
A
O
PHE
145
A
O
MET
315
A
O
MET
146
A
N
MET
284
A
N
MET
115
A
O
ILE
283
A
O
ILE
114
A
N
VAL
220
A
N
VAL
51
A
N
ILE
221
A
N
ILE
52
A
O
ASP
259
A
O
ASP
90
A
O
VAL
258
A
O
VAL
89
A
N
ARG
242
A
N
ARG
73
A
N
MET
334
A
N
MET
165
A
O
TYR
471
A
O
TYR
302
A
O
MET
472
A
O
MET
303
A
N
ASP
425
A
N
ASP
256
A
O
ARG
422
A
O
ARG
253
A
N
VAL
360
A
N
VAL
191
A
N
TRP
361
A
N
TRP
192
A
O
VAL
406
A
O
VAL
237
A
O
ILE
407
A
O
ILE
238
A
N
ILE
384
A
N
ILE
215
A
N
LEU
435
A
N
LEU
266
A
O
ARG
439
A
O
ARG
270
A
N
GLU
573
A
N
GLU
404
A
O
VAL
576
A
O
VAL
407
A
N
VAL
580
A
N
VAL
411
A
O
ARG
588
A
O
ARG
419
1
A
CG
LYS
185
A
CG
LYS
16
1
Y
1
A
CD
LYS
185
A
CD
LYS
16
1
Y
1
A
CE
LYS
185
A
CE
LYS
16
1
Y
1
A
NZ
LYS
185
A
NZ
LYS
16
1
Y
1
A
CG
LYS
187
A
CG
LYS
18
1
Y
1
A
CD
LYS
187
A
CD
LYS
18
1
Y
1
A
CE
LYS
187
A
CE
LYS
18
1
Y
1
A
NZ
LYS
187
A
NZ
LYS
18
1
Y
1
A
CG
GLN
188
A
CG
GLN
19
1
Y
1
A
CD
GLN
188
A
CD
GLN
19
1
Y
1
A
OE1
GLN
188
A
OE1
GLN
19
1
Y
1
A
NE2
GLN
188
A
NE2
GLN
19
1
Y
1
A
CG
ARG
218
A
CG
ARG
49
1
Y
1
A
CD
ARG
218
A
CD
ARG
49
1
Y
1
A
NE
ARG
218
A
NE
ARG
49
1
Y
1
A
CZ
ARG
218
A
CZ
ARG
49
1
Y
1
A
NH1
ARG
218
A
NH1
ARG
49
1
Y
1
A
NH2
ARG
218
A
NH2
ARG
49
1
Y
1
A
CG
GLU
234
A
CG
GLU
65
1
Y
1
A
CD
GLU
234
A
CD
GLU
65
1
Y
1
A
OE1
GLU
234
A
OE1
GLU
65
1
Y
1
A
OE2
GLU
234
A
OE2
GLU
65
1
Y
1
A
CG
ARG
237
A
CG
ARG
68
1
Y
1
A
CD
ARG
237
A
CD
ARG
68
1
Y
1
A
NE
ARG
237
A
NE
ARG
68
1
Y
1
A
CZ
ARG
237
A
CZ
ARG
68
1
Y
1
A
NH1
ARG
237
A
NH1
ARG
68
1
Y
1
A
NH2
ARG
237
A
NH2
ARG
68
1
Y
1
A
CG
ASN
249
A
CG
ASN
80
1
Y
1
A
OD1
ASN
249
A
OD1
ASN
80
1
Y
1
A
ND2
ASN
249
A
ND2
ASN
80
1
Y
1
A
CG1
VAL
250
A
CG1
VAL
81
1
Y
1
A
CG2
VAL
250
A
CG2
VAL
81
1
Y
1
A
CG
GLU
256
A
CG
GLU
87
1
Y
1
A
CD
GLU
256
A
CD
GLU
87
1
Y
1
A
OE1
GLU
256
A
OE1
GLU
87
1
Y
1
A
OE2
GLU
256
A
OE2
GLU
87
1
Y
1
A
CG1
ILE
274
A
CG1
ILE
105
1
Y
1
A
CG2
ILE
274
A
CG2
ILE
105
1
Y
1
A
CD1
ILE
274
A
CD1
ILE
105
1
Y
1
A
CG
ARG
275
A
CG
ARG
106
1
Y
1
A
CD
ARG
275
A
CD
ARG
106
1
Y
1
A
NE
ARG
275
A
NE
ARG
106
1
Y
1
A
CZ
ARG
275
A
CZ
ARG
106
1
Y
1
A
NH1
ARG
275
A
NH1
ARG
106
1
Y
1
A
NH2
ARG
275
A
NH2
ARG
106
1
Y
1
A
CG
ASN
278
A
CG
ASN
109
1
Y
1
A
OD1
ASN
278
A
OD1
ASN
109
1
Y
1
A
ND2
ASN
278
A
ND2
ASN
109
1
Y
1
A
CG
GLU
306
A
CG
GLU
137
1
Y
1
A
CD
GLU
306
A
CD
GLU
137
1
Y
1
A
OE1
GLU
306
A
OE1
GLU
137
1
Y
1
A
OE2
GLU
306
A
OE2
GLU
137
1
Y
1
A
CG
LYS
378
A
CG
LYS
209
1
Y
1
A
CD
LYS
378
A
CD
LYS
209
1
Y
1
A
CE
LYS
378
A
CE
LYS
209
1
Y
1
A
NZ
LYS
378
A
NZ
LYS
209
1
Y
1
A
CG
ARG
388
A
CG
ARG
219
1
Y
1
A
CD
ARG
388
A
CD
ARG
219
1
Y
1
A
NE
ARG
388
A
NE
ARG
219
1
Y
1
A
CZ
ARG
388
A
CZ
ARG
219
1
Y
1
A
NH1
ARG
388
A
NH1
ARG
219
1
Y
1
A
NH2
ARG
388
A
NH2
ARG
219
1
Y
1
A
CG
LYS
389
A
CG
LYS
220
1
Y
1
A
CD
LYS
389
A
CD
LYS
220
1
Y
1
A
CE
LYS
389
A
CE
LYS
220
1
Y
1
A
NZ
LYS
389
A
NZ
LYS
220
1
Y
1
A
CG
ASN
417
A
CG
ASN
248
1
Y
1
A
OD1
ASN
417
A
OD1
ASN
248
1
Y
1
A
ND2
ASN
417
A
ND2
ASN
248
1
Y
1
A
CG
LYS
419
A
CG
LYS
250
1
Y
1
A
CD
LYS
419
A
CD
LYS
250
1
Y
1
A
CE
LYS
419
A
CE
LYS
250
1
Y
1
A
NZ
LYS
419
A
NZ
LYS
250
1
Y
1
A
CG
LYS
466
A
CG
LYS
297
1
Y
1
A
CD
LYS
466
A
CD
LYS
297
1
Y
1
A
CE
LYS
466
A
CE
LYS
297
1
Y
1
A
NZ
LYS
466
A
NZ
LYS
297
1
Y
1
A
CG
GLU
479
A
CG
GLU
310
1
Y
1
A
CD
GLU
479
A
CD
GLU
310
1
Y
1
A
OE1
GLU
479
A
OE1
GLU
310
1
Y
1
A
OE2
GLU
479
A
OE2
GLU
310
1
Y
1
A
CG
ARG
509
A
CG
ARG
340
1
Y
1
A
CD
ARG
509
A
CD
ARG
340
1
Y
1
A
NE
ARG
509
A
NE
ARG
340
1
Y
1
A
CZ
ARG
509
A
CZ
ARG
340
1
Y
1
A
NH1
ARG
509
A
NH1
ARG
340
1
Y
1
A
NH2
ARG
509
A
NH2
ARG
340
1
Y
1
A
CG
GLU
519
A
CG
GLU
350
1
Y
1
A
CD
GLU
519
A
CD
GLU
350
1
Y
1
A
OE1
GLU
519
A
OE1
GLU
350
1
Y
1
A
OE2
GLU
519
A
OE2
GLU
350
1
Y
1
A
CG
ARG
525
A
CG
ARG
356
1
Y
1
A
CD
ARG
525
A
CD
ARG
356
1
Y
1
A
NE
ARG
525
A
NE
ARG
356
1
Y
1
A
CZ
ARG
525
A
CZ
ARG
356
1
Y
1
A
NH1
ARG
525
A
NH1
ARG
356
1
Y
1
A
NH2
ARG
525
A
NH2
ARG
356
1
Y
1
A
CG
LYS
530
A
CG
LYS
361
1
Y
1
A
CD
LYS
530
A
CD
LYS
361
1
Y
1
A
CE
LYS
530
A
CE
LYS
361
1
Y
1
A
NZ
LYS
530
A
NZ
LYS
361
1
Y
1
A
CG
LYS
537
A
CG
LYS
368
1
Y
1
A
CD
LYS
537
A
CD
LYS
368
1
Y
1
A
CE
LYS
537
A
CE
LYS
368
1
Y
1
A
NZ
LYS
537
A
NZ
LYS
368
1
Y
1
A
CG
ASN
568
A
CG
ASN
399
1
Y
1
A
OD1
ASN
568
A
OD1
ASN
399
1
Y
1
A
ND2
ASN
568
A
ND2
ASN
399
1
Y
1
A
MET
170
A
MET
1
1
Y
1
A
HIS
171
A
HIS
2
1
Y
1
A
HIS
172
A
HIS
3
1
Y
1
A
HIS
173
A
HIS
4
1
Y
1
A
HIS
174
A
HIS
5
1
Y
1
A
HIS
175
A
HIS
6
1
Y
1
A
HIS
176
A
HIS
7
1
Y
1
A
SER
177
A
SER
8
1
Y
1
A
SER
178
A
SER
9
1
Y
1
A
SER
179
A
SER
10
1
Y
1
A
GLY
180
A
GLY
11
1
Y
1
A
PRO
181
A
PRO
12
1
Y
1
A
SER
182
A
SER
13
1
Y
1
A
MET
183
A
MET
14
1
Y
1
A
LEU
184
A
LEU
15
1
Y
1
A
THR
251
A
THR
82
1
Y
1
A
HIS
252
A
HIS
83
1
Y
1
A
SER
253
A
SER
84
1
Y
1
A
GLY
254
A
GLY
85
1
Y
1
A
THR
255
A
THR
86
1
Y
1
A
MET
244
-91.90
58.79
1
A
MET
414
-118.01
66.47
1
A
ASP
501
46.05
-119.11
1
A
LYS
537
-84.44
-80.51
1
A
LYS
591
-151.04
73.62
1
A
CYS
600
-147.48
26.00
52.420
19.2785
6.990
0.2259
0.1776
0.1801
1.9000
34.5110
1648
32019
5.1500
98.8500
0.2100
1
FREE R-VALUE
1.360
MOLECULAR REPLACEMENT
22.3900
0.9000
1.1100
2VBC
1.9000
34.5110
271
3573
26.49
24.51
28
0
3274
428
0.006
3383
0.842
4608
0.056
520
0.005
594
9.909
2768
0.2420
0.0000
0.1984
1.9559
120
2462
2582
12
96.0000
0.2625
0.0000
0.1852
2.0191
135
2507
2642
12
99.0000
0.2773
0.0000
0.1840
2.0912
120
2523
2643
12
99.0000
0.2360
0.0000
0.1746
2.1749
141
2559
2700
12
99.0000
0.2347
0.0000
0.1776
2.2739
126
2540
2666
12
99.0000
0.2352
0.0000
0.1888
2.3937
149
2504
2653
12
99.0000
0.2566
0.0000
0.1913
2.5437
160
2509
2669
12
99.0000
0.2591
0.0000
0.1869
2.7400
131
2534
2665
12
99.0000
0.1992
0.0000
0.1908
3.0156
160
2544
2704
12
100.0000
0.2314
0.0000
0.1819
3.4516
139
2536
2675
12
99.0000
0.1856
0.0000
0.1606
4.3473
157
2521
2678
12
99.0000
0.2177
0.0000
0.1621
34.5170
110
2632
2742
12
99.0000
18.210
1.900
50.000
6ADY
32052
0.046
0.030
0.055
0.967
1
14.800
3.400
99.000
0.146
1.900
1.970
3149
0.971
0.097
0.176
1.148
1
3.300
98.300
0.108
1.970
2.050
3197
0.984
0.068
0.127
1.058
1
3.600
99.300
0.089
2.050
2.140
3186
0.989
0.057
0.106
1.111
1
3.500
98.900
0.069
2.140
2.250
3182
0.993
0.044
0.082
0.986
1
3.500
99.300
0.057
2.250
2.390
3212
0.990
0.037
0.068
0.935
1
3.500
99.300
0.047
2.390
2.580
3204
0.996
0.030
0.056
0.792
1
3.500
99.100
0.039
2.580
2.840
3229
0.997
0.025
0.047
0.724
1
3.500
99.400
0.038
2.840
3.250
3186
0.996
0.024
0.045
0.753
1
3.500
99.400
0.040
3.250
4.090
3229
0.995
0.027
0.048
1.184
1
3.300
98.700
0.038
4.090
50.000
3278
0.995
0.024
0.045
1.012
1
3.500
98.800
refinement
PHENIX
1.12_2829
data scaling
HKL-2000
data extraction
PDB_EXTRACT
3.24
data reduction
HKL-2000
phasing
PHASER
N
Crystal structure of the Zika virus NS3 helicase (ADP-Mn2+ complex, form 2)
1
N
N
2
N
N
3
N
N
4
N
N
A
ARG
203
A
ARG
34
HELX_P
A
LYS
215
A
LYS
46
1
AA1
13
A
THR
225
A
THR
56
HELX_P
A
LEU
236
A
LEU
67
1
AA2
12
A
HIS
263
A
HIS
94
HELX_P
A
GLN
272
A
GLN
103
1
AA3
10
A
ASP
291
A
ASP
122
HELX_P
A
MET
307
A
MET
138
1
AA4
17
A
PHE
349
A
PHE
180
HELX_P
A
HIS
355
A
HIS
186
1
AA5
7
A
SER
365
A
SER
196
HELX_P
A
ALA
379
A
ALA
210
1
AA6
15
A
SER
387
A
SER
218
HELX_P
A
LYS
389
A
LYS
220
5
AA7
3
A
THR
390
A
THR
221
HELX_P
A
GLN
396
A
GLN
227
1
AA8
7
A
GLN
396
A
GLN
227
HELX_P
A
GLN
401
A
GLN
232
1
AA9
6
A
ASP
410
A
ASP
241
HELX_P
A
MET
414
A
MET
245
5
AB1
5
A
THR
449
A
THR
280
HELX_P
A
GLY
458
A
GLY
289
1
AB2
10
A
HIS
484
A
HIS
315
HELX_P
A
ASP
495
A
ASP
326
1
AB3
12
A
TYR
508
A
TYR
339
HELX_P
A
VAL
515
A
VAL
346
5
AB4
8
A
ARG
525
A
ARG
356
HELX_P
A
LYS
537
A
LYS
368
1
AB5
13
A
PRO
542
A
PRO
373
HELX_P
A
ALA
552
A
ALA
383
1
AB6
11
A
ARG
559
A
ARG
390
HELX_P
A
PHE
563
A
PHE
394
5
AB7
5
A
THR
566
A
THR
397
HELX_P
A
THR
570
A
THR
401
5
AB8
5
A
ASP
596
A
ASP
427
HELX_P
A
CYS
600
A
CYS
431
5
AB9
5
A
ASP
602
A
ASP
433
HELX_P
A
ALA
614
A
ALA
445
1
AC1
13
metalc
2.291
A
THR
201
A
OG1
THR
32
1_555
A
MN
702
C
MN
MN
1_555
metalc
2.331
A
GLU
286
A
OE2
GLU
117
1_555
A
MN
702
C
MN
MN
1_555
metalc
2.239
A
ADP
701
B
O1B
ADP
1_555
A
MN
702
C
MN
MN
1_555
metalc
2.148
A
MN
702
C
MN
MN
1_555
A
HOH
818
D
O
HOH
1_555
metalc
2.145
A
MN
702
C
MN
MN
1_555
A
HOH
851
D
O
HOH
1_555
metalc
2.393
A
MN
702
C
MN
MN
1_555
A
HOH
890
D
O
HOH
1_555
HYDROLASE
Zika virus NS3 helicase, ADP-Mn2+ complex, HYDROLASE
A
GLY
444
A
GLY
275
1
A
PRO
445
A
PRO
276
4.14
POLG_ZIKV
UNP
1
1679
Q32ZE1
PSMLKKKQLTVLDLHPGAGKTRRVLPEIVREAIKKRLRTVILAPTRVVAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDL
MCHATFTSRLLQPIRVPNYNLNIMDEAHFTDPSSIAARGYISTRVEMGEAAAIFMTATPPGTRDAFPDSNSPIMDTEVEV
PERAWSSGFDWVTDHSGKTVWFVPSVRNGNEIAACLTKAGKRVIQLSRKTFETEFQKTKNQEWDFVITTDISEMGANFKA
DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEYMYGGGCAETDEGHAHWLEARMLLDNIYLQ
DGLIASLYRPEADKVAAIEGEFKLRTEQRKTFVELMKRGDLPVWLAYQVASAGITYTDRRWCFDGTTNNTIMEDSVPAEV
WTKYGEKRVLKPRWMDARVCSDHAALKSFKEFAAGKR
1679
2115
6ADY
181
617
Q32ZE1
A
1
12
448
1
expression tag
MET
170
6ADY
A
Q32ZE1
UNP
1
1
expression tag
HIS
171
6ADY
A
Q32ZE1
UNP
2
1
expression tag
HIS
172
6ADY
A
Q32ZE1
UNP
3
1
expression tag
HIS
173
6ADY
A
Q32ZE1
UNP
4
1
expression tag
HIS
174
6ADY
A
Q32ZE1
UNP
5
1
expression tag
HIS
175
6ADY
A
Q32ZE1
UNP
6
1
expression tag
HIS
176
6ADY
A
Q32ZE1
UNP
7
1
expression tag
SER
177
6ADY
A
Q32ZE1
UNP
8
1
expression tag
SER
178
6ADY
A
Q32ZE1
UNP
9
1
expression tag
SER
179
6ADY
A
Q32ZE1
UNP
10
1
expression tag
GLY
180
6ADY
A
Q32ZE1
UNP
11
6
6
2
2
2
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
189
A
LEU
20
A
LEU
192
A
LEU
23
A
ALA
311
A
ALA
142
A
MET
315
A
MET
146
A
LEU
281
A
LEU
112
A
ASP
285
A
ASP
116
A
THR
219
A
THR
50
A
ALA
223
A
ALA
54
A
VAL
258
A
VAL
89
A
CYS
262
A
CYS
93
A
VAL
241
A
VAL
72
A
TYR
243
A
TYR
74
A
ILE
333
A
ILE
164
A
GLU
337
A
GLU
168
A
ASP
469
A
ASP
300
A
TYR
473
A
TYR
304
A
ARG
422
A
ARG
253
A
ASP
425
A
ASP
256
A
THR
359
A
THR
190
A
PHE
362
A
PHE
193
A
PHE
405
A
PHE
236
A
THR
408
A
THR
239
A
VAL
383
A
VAL
214
A
LEU
386
A
LEU
217
A
ARG
428
A
ARG
259
A
LEU
435
A
LEU
266
A
ARG
439
A
ARG
270
A
PRO
447
A
PRO
278
A
MET
572
A
MET
403
A
GLU
573
A
GLU
404
A
VAL
576
A
VAL
407
A
PRO
577
A
PRO
408
A
GLU
579
A
GLU
410
A
TRP
581
A
TRP
412
A
LYS
587
A
LYS
418
A
VAL
589
A
VAL
420
binding site for residue ADP A 701
A
ADP
701
Software
14
binding site for residue MN A 702
A
MN
702
Software
6
A
GLY
197
A
GLY
28
14
1_555
A
ALA
198
A
ALA
29
14
1_555
A
GLY
199
A
GLY
30
14
1_555
A
LYS
200
A
LYS
31
14
1_555
A
THR
201
A
THR
32
14
1_555
A
ARG
202
A
ARG
33
14
1_555
A
ASN
330
A
ASN
161
14
1_555
A
ARG
462
A
ARG
293
14
1_555
A
MN
702
C
MN
14
1_555
A
HOH
818
D
HOH
14
1_555
A
HOH
879
D
HOH
14
1_555
A
HOH
890
D
HOH
14
1_555
A
HOH
1010
D
HOH
14
1_555
A
HOH
1021
D
HOH
14
1_555
A
THR
201
A
THR
32
6
1_555
A
GLU
286
A
GLU
117
6
1_555
A
ADP
701
B
ADP
6
1_555
A
HOH
818
D
HOH
6
1_555
A
HOH
851
D
HOH
6
1_555
A
HOH
890
D
HOH
6
1_555
4
P 1 21 1