0.017258
0.000000
0.000000
-0.000000
0.017258
0.000000
0.000000
-0.000000
0.005418
0.00000
0.00000
0.00000
Olshansky, L.
Vallapurakal, J.
Huerta-Lavorie, R.
Nguyen, A.I.
Tilley, T.D.
Borovik, A.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
57.945
57.945
184.565
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C35 H45 Co4 N7 O13 S
1039.569
N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
O
N
237
N
C
N
238
N
N
N
239
R
C
N
240
N
C
N
241
N
S
N
242
N
N
N
243
S
C
N
244
S
C
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
C
N
249
N
C
N
250
N
O
N
251
N
N
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
O
N
256
N
O
N
257
N
CO
N
258
N
O
N
259
N
O
Y
260
N
N
Y
261
N
C
Y
262
N
C
Y
263
N
C
Y
264
N
C
Y
265
N
C
N
266
N
CO
Y
267
N
N
Y
268
N
C
Y
269
N
C
Y
270
N
C
Y
271
N
C
Y
272
N
C
N
273
N
O
N
274
N
CO
Y
275
N
N
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
O
N
285
N
O
N
286
N
O
N
287
N
CO
N
288
N
O
N
289
N
O
Y
290
N
N
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
N
369
N
C
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
R
C
N
400
N
O
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
N
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
Y
260
N
doub
Y
261
N
sing
Y
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
Y
266
N
doub
Y
267
N
sing
Y
268
N
sing
Y
269
N
doub
Y
270
N
sing
Y
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
Y
276
N
doub
Y
277
N
sing
Y
278
N
sing
Y
279
N
doub
Y
280
N
sing
Y
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
Y
288
N
doub
Y
289
N
sing
Y
290
N
sing
Y
291
N
doub
Y
292
N
sing
Y
293
N
doub
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
Y
352
N
doub
Y
353
N
sing
Y
354
N
sing
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
doub
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
doub
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
Y
421
N
doub
Y
422
N
sing
Y
423
N
sing
N
424
N
sing
Y
425
N
doub
Y
426
N
sing
Y
427
N
sing
N
428
N
sing
Y
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
doub
N
433
N
sing
Y
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
doub
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
Y
449
N
doub
Y
450
N
sing
Y
451
N
sing
N
452
N
sing
Y
453
N
doub
N
454
N
sing
Y
455
N
doub
N
456
N
sing
Y
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
doub
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
US
J. Am. Chem. Soc.
JACSAT
1520-5126
140
2739
2742
10.1021/jacs.7b13052
29401385
Artificial Metalloproteins Containing Co
2018
10.2210/pdb6aue/pdb
pdb_00006aue
100
1
PIXEL
2017-05-26
DECTRIS PILATUS 6M
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
BL9-2
SSRL
1
SYNCHROTRON
SSRL BEAMLINE BL9-2
16587.025
Streptavidin
E101Q, S112Y, K121A
1
man
polymer
1039.569
N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine
1
syn
non-polymer
18.015
water
74
nat
water
no
no
MASMTGGQQMGRDEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWK
NNYRNAHSATTWSGQYVGGAQARINTQWLLTYGTTEANAWASTLVGHDTFTKVKPSAASIDAAKKAGVNNGNPLDAVQQ
MASMTGGQQMGRDEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWK
NNYRNAHSATTWSGQYVGGAQARINTQWLLTYGTTEANAWASTLVGHDTFTKVKPSAASIDAAKKAGVNNGNPLDAVQQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
1
159
1895
Streptomyces avidinii
562
Escherichia coli
Biological sequence
1
2.34
47.32
VAPOR DIFFUSION, SITTING DROP
2.6 M ammonium sulfate, 0.1 M sodium acetate, pH 4.0
298
citation
pdbx_audit_support
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
refine_hist
repository
Initial release
Database references
Author supporting evidence
Data collection
Author supporting evidence
Data collection
Database references
Refinement description
1
0
2018-02-28
1
1
2018-03-14
1
2
2019-04-17
1
3
2020-01-01
1
4
2023-10-04
_citation.journal_volume
_citation.page_first
_citation.page_last
_pdbx_audit_support.funding_organization
_pdbx_audit_support.grant_number
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_refine_hist.d_res_low
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM120349
N
RCSB
Y
RCSB
2017-08-31
REL
REL
OL3
N-biotin-C-Co4(mu3-O)4(OAc)(Py)4(H2O)3-beta-alanine
HOH
water
2QCB
PDB
experimental model
OL3
1
2
OL3
OL3
201
A
HOH
74
3
HOH
HOH
301
A
HOH
4
3
HOH
HOH
302
A
HOH
40
3
HOH
HOH
303
A
HOH
7
3
HOH
HOH
304
A
HOH
38
3
HOH
HOH
305
A
HOH
18
3
HOH
HOH
306
A
HOH
45
3
HOH
HOH
307
A
HOH
9
3
HOH
HOH
308
A
HOH
60
3
HOH
HOH
309
A
HOH
1
3
HOH
HOH
310
A
HOH
39
3
HOH
HOH
311
A
HOH
20
3
HOH
HOH
312
A
HOH
25
3
HOH
HOH
313
A
HOH
5
3
HOH
HOH
314
A
HOH
8
3
HOH
HOH
315
A
HOH
32
3
HOH
HOH
316
A
HOH
10
3
HOH
HOH
317
A
HOH
67
3
HOH
HOH
318
A
HOH
61
3
HOH
HOH
319
A
HOH
11
3
HOH
HOH
320
A
HOH
29
3
HOH
HOH
321
A
HOH
31
3
HOH
HOH
322
A
HOH
17
3
HOH
HOH
323
A
HOH
21
3
HOH
HOH
324
A
HOH
3
3
HOH
HOH
325
A
HOH
46
3
HOH
HOH
326
A
HOH
69
3
HOH
HOH
327
A
HOH
36
3
HOH
HOH
328
A
HOH
63
3
HOH
HOH
329
A
HOH
27
3
HOH
HOH
330
A
HOH
50
3
HOH
HOH
331
A
HOH
47
3
HOH
HOH
332
A
HOH
15
3
HOH
HOH
333
A
HOH
66
3
HOH
HOH
334
A
HOH
56
3
HOH
HOH
335
A
HOH
30
3
HOH
HOH
336
A
HOH
6
3
HOH
HOH
337
A
HOH
24
3
HOH
HOH
338
A
HOH
2
3
HOH
HOH
339
A
HOH
34
3
HOH
HOH
340
A
HOH
33
3
HOH
HOH
341
A
HOH
23
3
HOH
HOH
342
A
HOH
49
3
HOH
HOH
343
A
HOH
22
3
HOH
HOH
344
A
HOH
58
3
HOH
HOH
345
A
HOH
13
3
HOH
HOH
346
A
HOH
65
3
HOH
HOH
347
A
HOH
43
3
HOH
HOH
348
A
HOH
41
3
HOH
HOH
349
A
HOH
28
3
HOH
HOH
350
A
HOH
19
3
HOH
HOH
351
A
HOH
70
3
HOH
HOH
352
A
HOH
12
3
HOH
HOH
353
A
HOH
75
3
HOH
HOH
354
A
HOH
26
3
HOH
HOH
355
A
HOH
68
3
HOH
HOH
356
A
HOH
16
3
HOH
HOH
357
A
HOH
59
3
HOH
HOH
358
A
HOH
35
3
HOH
HOH
359
A
HOH
42
3
HOH
HOH
360
A
HOH
14
3
HOH
HOH
361
A
HOH
73
3
HOH
HOH
362
A
HOH
55
3
HOH
HOH
363
A
HOH
52
3
HOH
HOH
364
A
HOH
54
3
HOH
HOH
365
A
HOH
51
3
HOH
HOH
366
A
HOH
57
3
HOH
HOH
367
A
HOH
44
3
HOH
HOH
368
A
HOH
71
3
HOH
HOH
369
A
HOH
64
3
HOH
HOH
370
A
HOH
72
3
HOH
HOH
371
A
HOH
62
3
HOH
HOH
372
A
HOH
37
3
HOH
HOH
373
A
HOH
48
3
HOH
HOH
374
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
ASP
13
n
13
ASP
13
A
GLU
14
n
14
GLU
14
A
ALA
15
n
15
ALA
15
A
GLY
16
n
16
GLY
16
A
ILE
17
n
17
ILE
17
A
THR
18
n
18
THR
18
A
GLY
19
n
19
GLY
19
A
THR
20
n
20
THR
20
A
TRP
21
n
21
TRP
21
A
TYR
22
n
22
TYR
22
A
ASN
23
n
23
ASN
23
A
GLN
24
n
24
GLN
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
SER
27
n
27
SER
27
A
THR
28
n
28
THR
28
A
PHE
29
n
29
PHE
29
A
ILE
30
n
30
ILE
30
A
VAL
31
n
31
VAL
31
A
THR
32
n
32
THR
32
A
ALA
33
n
33
ALA
33
A
GLY
34
n
34
GLY
34
A
ALA
35
n
35
ALA
35
A
ASP
36
n
36
ASP
36
A
GLY
37
n
37
GLY
37
A
ALA
38
n
38
ALA
38
A
LEU
39
n
39
LEU
39
A
THR
40
n
40
THR
40
A
GLY
41
n
41
GLY
41
A
THR
42
n
42
THR
42
A
TYR
43
n
43
TYR
43
A
GLU
44
n
44
GLU
44
A
SER
45
n
45
SER
45
A
ALA
46
n
46
ALA
46
A
VAL
47
n
47
VAL
47
A
GLY
48
n
48
GLY
48
A
ASN
49
n
49
ASN
49
A
ALA
50
n
50
ALA
50
A
GLU
51
n
51
GLU
51
A
SER
52
n
52
SER
52
A
ARG
53
n
53
ARG
53
A
TYR
54
n
54
TYR
54
A
VAL
55
n
55
VAL
55
A
LEU
56
n
56
LEU
56
A
THR
57
n
57
THR
57
A
GLY
58
n
58
GLY
58
A
ARG
59
n
59
ARG
59
A
TYR
60
n
60
TYR
60
A
ASP
61
n
61
ASP
61
A
SER
62
n
62
SER
62
A
ALA
63
n
63
ALA
63
A
PRO
64
n
64
PRO
64
A
ALA
65
n
65
ALA
65
A
THR
66
n
66
THR
66
A
ASP
67
n
67
ASP
67
A
GLY
68
n
68
GLY
68
A
SER
69
n
69
SER
69
A
GLY
70
n
70
GLY
70
A
THR
71
n
71
THR
71
A
ALA
72
n
72
ALA
72
A
LEU
73
n
73
LEU
73
A
GLY
74
n
74
GLY
74
A
TRP
75
n
75
TRP
75
A
THR
76
n
76
THR
76
A
VAL
77
n
77
VAL
77
A
ALA
78
n
78
ALA
78
A
TRP
79
n
79
TRP
79
A
LYS
80
n
80
LYS
80
A
ASN
81
n
81
ASN
81
A
ASN
82
n
82
ASN
82
A
TYR
83
n
83
TYR
83
A
ARG
84
n
84
ARG
84
A
ASN
85
n
85
ASN
85
A
ALA
86
n
86
ALA
86
A
HIS
87
n
87
HIS
87
A
SER
88
n
88
SER
88
A
ALA
89
n
89
ALA
89
A
THR
90
n
90
THR
90
A
THR
91
n
91
THR
91
A
TRP
92
n
92
TRP
92
A
SER
93
n
93
SER
93
A
GLY
94
n
94
GLY
94
A
GLN
95
n
95
GLN
95
A
TYR
96
n
96
TYR
96
A
VAL
97
n
97
VAL
97
A
GLY
98
n
98
GLY
98
A
GLY
99
n
99
GLY
99
A
ALA
100
n
100
ALA
100
A
GLN
101
n
101
GLN
101
A
ALA
102
n
102
ALA
102
A
ARG
103
n
103
ARG
103
A
ILE
104
n
104
ILE
104
A
ASN
105
n
105
ASN
105
A
THR
106
n
106
THR
106
A
GLN
107
n
107
GLN
107
A
TRP
108
n
108
TRP
108
A
LEU
109
n
109
LEU
109
A
LEU
110
n
110
LEU
110
A
THR
111
n
111
THR
111
A
TYR
112
n
112
TYR
112
A
GLY
113
n
113
GLY
113
A
THR
114
n
114
THR
114
A
THR
115
n
115
THR
115
A
GLU
116
n
116
GLU
116
A
ALA
117
n
117
ALA
117
A
ASN
118
n
118
ASN
118
A
ALA
119
n
119
ALA
119
A
TRP
120
n
120
TRP
120
A
ALA
121
n
121
ALA
121
A
SER
122
n
122
SER
122
A
THR
123
n
123
THR
123
A
LEU
124
n
124
LEU
124
A
VAL
125
n
125
VAL
125
A
GLY
126
n
126
GLY
126
A
HIS
127
n
127
HIS
127
A
ASP
128
n
128
ASP
128
A
THR
129
n
129
THR
129
A
PHE
130
n
130
PHE
130
A
THR
131
n
131
THR
131
A
LYS
132
n
132
LYS
132
A
VAL
133
n
133
VAL
133
A
n
134
134
A
n
135
135
A
n
136
136
A
n
137
137
A
n
138
138
A
n
139
139
A
n
140
140
A
n
141
141
A
n
142
142
A
n
143
143
A
n
144
144
A
n
145
145
A
n
146
146
A
n
147
147
A
n
148
148
A
n
149
149
A
n
150
150
A
n
151
151
A
n
152
152
A
n
153
153
A
n
154
154
A
n
155
155
A
n
156
156
A
n
157
157
A
n
158
158
A
n
159
159
A
author_and_software_defined_assembly
PISA
4
tetrameric
gel filtration
9620
-57
18780
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_555
-y,-x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
10_555
-x,-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
15_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
19
A
N
GLY
19
A
O
VAL
31
A
O
VAL
31
A
N
ILE
30
A
N
ILE
30
A
O
THR
42
A
O
THR
42
A
N
LEU
39
A
N
LEU
39
A
O
GLY
58
A
O
GLY
58
A
N
THR
57
A
N
THR
57
A
O
THR
76
A
O
THR
76
A
N
TRP
79
A
N
TRP
79
A
O
ALA
86
A
O
ALA
86
A
N
VAL
97
A
N
VAL
97
A
O
ARG
103
A
O
ARG
103
A
N
LEU
110
A
N
LEU
110
A
O
LEU
124
A
O
LEU
124
A
O
THR
131
A
O
THR
131
A
N
TYR
22
A
N
TYR
22
1
A
HOH
317
C
HOH
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
SER
3
A
SER
3
1
Y
1
A
MET
4
A
MET
4
1
Y
1
A
THR
5
A
THR
5
1
Y
1
A
GLY
6
A
GLY
6
1
Y
1
A
GLY
7
A
GLY
7
1
Y
1
A
GLN
8
A
GLN
8
1
Y
1
A
GLN
9
A
GLN
9
1
Y
1
A
MET
10
A
MET
10
1
Y
1
A
GLY
11
A
GLY
11
1
Y
1
A
ARG
12
A
ARG
12
1
Y
1
A
LYS
134
A
LYS
134
1
Y
1
A
PRO
135
A
PRO
135
1
Y
1
A
SER
136
A
SER
136
1
Y
1
A
ALA
137
A
ALA
137
1
Y
1
A
ALA
138
A
ALA
138
1
Y
1
A
SER
139
A
SER
139
1
Y
1
A
ILE
140
A
ILE
140
1
Y
1
A
ASP
141
A
ASP
141
1
Y
1
A
ALA
142
A
ALA
142
1
Y
1
A
ALA
143
A
ALA
143
1
Y
1
A
LYS
144
A
LYS
144
1
Y
1
A
LYS
145
A
LYS
145
1
Y
1
A
ALA
146
A
ALA
146
1
Y
1
A
GLY
147
A
GLY
147
1
Y
1
A
VAL
148
A
VAL
148
1
Y
1
A
ASN
149
A
ASN
149
1
Y
1
A
ASN
150
A
ASN
150
1
Y
1
A
GLY
151
A
GLY
151
1
Y
1
A
ASN
152
A
ASN
152
1
Y
1
A
PRO
153
A
PRO
153
1
Y
1
A
LEU
154
A
LEU
154
1
Y
1
A
ASP
155
A
ASP
155
1
Y
1
A
ALA
156
A
ALA
156
1
Y
1
A
VAL
157
A
VAL
157
1
Y
1
A
GLN
158
A
GLN
158
1
Y
1
A
GLN
159
A
GLN
159
1
Y
1
A
A
O
O
HOH
HOH
322
335
2.07
1
3.37
0.50
120.30
123.67
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
103
103
103
N
1
11.56
1.70
111.00
122.56
A
A
A
CB
CG
CD2
LEU
LEU
LEU
110
110
110
N
1
-6.45
0.90
118.30
111.85
A
A
A
CB
CG
OD2
ASP
ASP
ASP
128
128
128
N
1
A
A
CZ
CE2
TYR
TYR
96
96
-0.090
0.013
1.381
1.291
N
1
A
A
O
O
HOH
HOH
369
369
2.08
1_555
5_454
1
A
SER
52
70.07
-152.15
1
A
GLN
101
-112.98
65.02
20.803
-0.16
0.00
-0.00
-0.16
-0.00
0.32
0.953
0.951
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.22896
0.20258
0.20383
1.36
37.45
1688
32305
5.0
99.77
0.973
0.039
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.054
0.057
0.80
0.80
1.20
2QCB
MAXIMUM LIKELIHOOD
MASK
1.36
37.45
74
1040
60
0
906
0.051
0.021
1011
0.002
0.020
819
6.315
3.047
1503
2.465
3.000
1866
7.272
5.000
120
29.134
23.721
43
10.943
15.000
123
14.119
15.000
5
0.253
0.200
150
0.016
0.020
1164
0.001
0.020
245
2.111
1.844
483
2.098
1.841
482
2.967
2.764
602
2.967
2.768
603
3.791
2.379
526
2.792
2.033
457
4.043
2.956
685
6.792
24.492
1126
6.003
22.136
1061
0.326
0.303
1.399
116
2296
20
97.77
1.36
37.45
6AUE
34035
0.999
0.063
1
14.2
10.2
99.8
1
refinement
REFMAC
5.8.0155
data reduction
XDS
data scaling
Aimless
phasing
PHASER
N
Artificial Metalloproteins Containing a Co4O4 Active Site - 2xm-S112Y-b
1
N
N
2
N
N
3
N
N
A
ASP
13
A
ASP
13
HELX_P
A
THR
18
A
THR
18
1
AA1
6
A
THR
115
A
THR
115
HELX_P
A
ALA
121
A
ALA
121
5
AA2
7
METAL BINDING PROTEIN
streptavidin, biotin, artificial metalloprotein, Co4O4, photosynthesis, water oxidation, biomimetic, METAL BINDING PROTEIN
SAV_STRAV
UNP
1
38
P22629
EAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAESRYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTWS
GQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTKVKPSAASIDAAKKAGVNNGNPLDAVQQ
38
183
6AUE
14
159
P22629
A
1
14
159
1
expression tag
MET
1
6AUE
A
P22629
UNP
1
1
expression tag
ALA
2
6AUE
A
P22629
UNP
2
1
expression tag
SER
3
6AUE
A
P22629
UNP
3
1
expression tag
MET
4
6AUE
A
P22629
UNP
4
1
expression tag
THR
5
6AUE
A
P22629
UNP
5
1
expression tag
GLY
6
6AUE
A
P22629
UNP
6
1
expression tag
GLY
7
6AUE
A
P22629
UNP
7
1
expression tag
GLN
8
6AUE
A
P22629
UNP
8
1
expression tag
GLN
9
6AUE
A
P22629
UNP
9
1
expression tag
MET
10
6AUE
A
P22629
UNP
10
1
expression tag
GLY
11
6AUE
A
P22629
UNP
11
1
expression tag
ARG
12
6AUE
A
P22629
UNP
12
1
expression tag
ASP
13
6AUE
A
P22629
UNP
13
1
GLU
engineered mutation
GLN
101
6AUE
A
P22629
UNP
125
101
1
SER
engineered mutation
TYR
112
6AUE
A
P22629
UNP
136
112
1
LYS
engineered mutation
ALA
121
6AUE
A
P22629
UNP
145
121
9
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
19
A
GLY
19
A
ASN
23
A
ASN
23
A
THR
28
A
THR
28
A
ALA
33
A
ALA
33
A
ALA
38
A
ALA
38
A
GLU
44
A
GLU
44
A
TYR
54
A
TYR
54
A
TYR
60
A
TYR
60
A
THR
71
A
THR
71
A
LYS
80
A
LYS
80
A
ASN
85
A
ASN
85
A
VAL
97
A
VAL
97
A
ARG
103
A
ARG
103
A
TYR
112
A
TYR
112
A
THR
123
A
THR
123
A
THR
131
A
THR
131
A
GLY
19
A
GLY
19
A
ASN
23
A
ASN
23
binding site for residue OL3 A 201
A
OL3
201
Software
19
A
ASN
23
A
ASN
23
19
1_555
A
LEU
25
A
LEU
25
19
1_555
A
SER
27
A
SER
27
19
1_555
A
TYR
43
A
TYR
43
19
1_555
A
SER
45
A
SER
45
19
1_555
A
VAL
47
A
VAL
47
19
1_555
A
GLY
48
A
GLY
48
19
1_555
A
ASN
49
A
ASN
49
19
1_555
A
TRP
79
A
TRP
79
19
1_555
A
SER
88
A
SER
88
19
1_555
A
THR
90
A
THR
90
19
1_555
A
TRP
108
A
TRP
108
19
1_555
A
TYR
112
A
TYR
112
19
1_555
A
THR
114
A
THR
114
19
1_555
A
ALA
121
A
ALA
121
19
1_555
A
SER
122
A
SER
122
19
1_555
A
ASP
128
A
ASP
128
19
1_555
A
HOH
301
C
HOH
19
1_555
A
HOH
354
C
HOH
19
1_555
98
I 41 2 2