0.024561
0.000000
0.000000
0.000000
0.018470
0.000000
0.000000
0.000000
0.004569
0.00000
0.00000
0.00000
3.54356
2.42580
25.62398
1.50364
0.0
2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
9.50761
7.44341
1.04373
23.83732
0.0
2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
0.51345
0.48472
24.73122
6.32584
0.0
2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
4.01032
2.96436
19.97189
1.75589
0.0
2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
7.96527
9.05267
0.0
1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
9.55732
6.39887
1.23737
29.19336
0.0
2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31.
0000-0001-9719-3440
Padua, R.A.P.
0000-0001-5911-1117
Sun, Y.
0000-0003-2341-9667
Marko, I.
0000-0001-5438-1783
Pitsawong, W.
0000-0002-7631-8328
Kern, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
40.715
54.141
218.847
482411.411
C16 H19 Cl2 N5
352.262
6-(4-azanyl-4-methyl-piperidin-1-yl)-3-[2,3-bis(chloranyl)phenyl]pyrazin-2-amine
SHP099
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
N
17
N
N
Y
18
N
C
N
19
N
N
N
20
N
C
N
21
N
CL
N
22
N
CL
N
23
N
N
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
O
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
R
C
N
351
N
O
N
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
Y
368
N
C
Y
369
N
C
Y
370
N
C
Y
371
N
N
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
N
377
N
O
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
C
N
420
N
C
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
Y
10
N
doub
Y
11
N
sing
Y
12
N
sing
Y
13
N
doub
Y
14
N
doub
Y
15
N
doub
Y
16
N
sing
Y
17
N
sing
N
18
N
sing
Y
19
N
sing
N
20
N
sing
Y
21
N
doub
Y
22
N
doub
Y
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
Y
292
N
doub
Y
293
N
sing
Y
294
N
sing
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
doub
N
299
N
sing
Y
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
Y
366
N
sing
Y
367
N
sing
N
368
N
sing
Y
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
N
394
N
sing
Y
395
N
doub
N
396
N
sing
Y
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
UK
Nat Commun
2041-1723
9
4507
4507
10.1038/s41467-018-06814-w
30375376
Mechanism of activating mutations and allosteric drug inhibition of the phosphatase SHP2.
2018
0000-0001-5911-1117
0000-0001-7342-6131
10.2210/pdb6cms/pdb
pdb_00006cms
100
1
100
1
CCD
2016-05-01
ADSC QUANTUM 315r
CCD
2016-06-09
MARMOSAIC 325 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
2
0.9795
1.0
1.1270
1.0
8.2.2
ALS
0.9795
SYNCHROTRON
ALS BEAMLINE 8.2.2
BL14-1
SSRL
1.1270
SYNCHROTRON
SSRL BEAMLINE BL14-1
61004.883
Tyrosine-protein phosphatase non-receptor type 11
3.1.3.48
E76K
1
man
polymer
352.262
6-(4-azanyl-4-methyl-piperidin-1-yl)-3-[2,3-bis(chloranyl)phenyl]pyrazin-2-amine
1
syn
non-polymer
18.015
water
67
nat
water
Protein-tyrosine phosphatase 1D,PTP-1D,Protein-tyrosine phosphatase 2C,PTP-2C,SH-PTP2,Shp2,SH-PTP3
no
no
GSGMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAKL
VQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDK
GESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLA
ETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETK
CNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYT
LRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILID
IIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRI
GSGMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAKL
VQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDK
GESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLA
ETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETK
CNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYT
LRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILID
IIREKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRI
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Human
sample
1
532
PTPN11, PTP2C, SHPTP2
9606
Homo sapiens
E76K
469008
Escherichia coli
BL21(DE3)
Biological sequence
pET28a
1
2.11
37.78
VAPOR DIFFUSION, SITTING DROP
9
100 mM bicine pH 9, 100 mM NaCl, 19 % PEG MME 550
291
pdbx_audit_support
pdbx_audit_support
pdbx_audit_support
pdbx_audit_support
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Author supporting evidence
Data collection
Author supporting evidence
Data collection
Author supporting evidence
Author supporting evidence
Data collection
Database references
Refinement description
1
0
2018-11-14
1
1
2019-02-20
1
2
2019-04-17
1
3
2019-11-20
1
4
2020-01-08
1
5
2023-10-04
_pdbx_audit_support.funding_organization
_pdbx_audit_support.funding_organization
_pdbx_audit_support.funding_organization
_pdbx_audit_support.funding_organization
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Brazil
Brazilian National Council for Scientific and Technological Development (CNPq)
233809/2014-7
United States
Howard Hughes Medical Institute (HHMI)
United States
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
GM100966
N
RCSB
Y
RCSB
2018-03-06
REL
REL
5OD
6-(4-azanyl-4-methyl-piperidin-1-yl)-3-[2,3-bis(chloranyl)phenyl]pyrazin-2-amine
HOH
water
4DGP
PDB
experimental model
5OD
601
2
5OD
5OD
601
A
HOH
22
3
HOH
HOH
701
A
HOH
17
3
HOH
HOH
702
A
HOH
62
3
HOH
HOH
703
A
HOH
33
3
HOH
HOH
704
A
HOH
67
3
HOH
HOH
705
A
HOH
25
3
HOH
HOH
706
A
HOH
44
3
HOH
HOH
707
A
HOH
5
3
HOH
HOH
708
A
HOH
30
3
HOH
HOH
709
A
HOH
64
3
HOH
HOH
710
A
HOH
38
3
HOH
HOH
711
A
HOH
59
3
HOH
HOH
712
A
HOH
34
3
HOH
HOH
713
A
HOH
32
3
HOH
HOH
714
A
HOH
47
3
HOH
HOH
715
A
HOH
26
3
HOH
HOH
716
A
HOH
39
3
HOH
HOH
717
A
HOH
4
3
HOH
HOH
718
A
HOH
24
3
HOH
HOH
719
A
HOH
37
3
HOH
HOH
720
A
HOH
1
3
HOH
HOH
721
A
HOH
9
3
HOH
HOH
722
A
HOH
27
3
HOH
HOH
723
A
HOH
19
3
HOH
HOH
724
A
HOH
7
3
HOH
HOH
725
A
HOH
6
3
HOH
HOH
726
A
HOH
43
3
HOH
HOH
727
A
HOH
3
3
HOH
HOH
728
A
HOH
16
3
HOH
HOH
729
A
HOH
52
3
HOH
HOH
730
A
HOH
20
3
HOH
HOH
731
A
HOH
51
3
HOH
HOH
732
A
HOH
31
3
HOH
HOH
733
A
HOH
35
3
HOH
HOH
734
A
HOH
42
3
HOH
HOH
735
A
HOH
58
3
HOH
HOH
736
A
HOH
45
3
HOH
HOH
737
A
HOH
28
3
HOH
HOH
738
A
HOH
12
3
HOH
HOH
739
A
HOH
23
3
HOH
HOH
740
A
HOH
2
3
HOH
HOH
741
A
HOH
46
3
HOH
HOH
742
A
HOH
11
3
HOH
HOH
743
A
HOH
69
3
HOH
HOH
744
A
HOH
63
3
HOH
HOH
745
A
HOH
57
3
HOH
HOH
746
A
HOH
14
3
HOH
HOH
747
A
HOH
70
3
HOH
HOH
748
A
HOH
68
3
HOH
HOH
749
A
HOH
48
3
HOH
HOH
750
A
HOH
15
3
HOH
HOH
751
A
HOH
36
3
HOH
HOH
752
A
HOH
8
3
HOH
HOH
753
A
HOH
18
3
HOH
HOH
754
A
HOH
50
3
HOH
HOH
755
A
HOH
54
3
HOH
HOH
756
A
HOH
29
3
HOH
HOH
757
A
HOH
55
3
HOH
HOH
758
A
HOH
13
3
HOH
HOH
759
A
HOH
41
3
HOH
HOH
760
A
HOH
10
3
HOH
HOH
761
A
HOH
49
3
HOH
HOH
762
A
HOH
53
3
HOH
HOH
763
A
HOH
61
3
HOH
HOH
764
A
HOH
65
3
HOH
HOH
765
A
HOH
21
3
HOH
HOH
766
A
HOH
56
3
HOH
HOH
767
A
n
1
-2
A
n
2
-1
A
n
3
0
A
n
4
1
A
THR
2
n
5
THR
2
A
SER
3
n
6
SER
3
A
ARG
4
n
7
ARG
4
A
ARG
5
n
8
ARG
5
A
TRP
6
n
9
TRP
6
A
PHE
7
n
10
PHE
7
A
HIS
8
n
11
HIS
8
A
PRO
9
n
12
PRO
9
A
ASN
10
n
13
ASN
10
A
ILE
11
n
14
ILE
11
A
THR
12
n
15
THR
12
A
GLY
13
n
16
GLY
13
A
VAL
14
n
17
VAL
14
A
GLU
15
n
18
GLU
15
A
ALA
16
n
19
ALA
16
A
GLU
17
n
20
GLU
17
A
ASN
18
n
21
ASN
18
A
LEU
19
n
22
LEU
19
A
LEU
20
n
23
LEU
20
A
LEU
21
n
24
LEU
21
A
THR
22
n
25
THR
22
A
ARG
23
n
26
ARG
23
A
GLY
24
n
27
GLY
24
A
VAL
25
n
28
VAL
25
A
ASP
26
n
29
ASP
26
A
GLY
27
n
30
GLY
27
A
SER
28
n
31
SER
28
A
PHE
29
n
32
PHE
29
A
LEU
30
n
33
LEU
30
A
ALA
31
n
34
ALA
31
A
ARG
32
n
35
ARG
32
A
PRO
33
n
36
PRO
33
A
SER
34
n
37
SER
34
A
n
38
35
A
n
39
36
A
n
40
37
A
PRO
38
n
41
PRO
38
A
GLY
39
n
42
GLY
39
A
ASP
40
n
43
ASP
40
A
PHE
41
n
44
PHE
41
A
THR
42
n
45
THR
42
A
LEU
43
n
46
LEU
43
A
SER
44
n
47
SER
44
A
VAL
45
n
48
VAL
45
A
ARG
46
n
49
ARG
46
A
ARG
47
n
50
ARG
47
A
ASN
48
n
51
ASN
48
A
GLY
49
n
52
GLY
49
A
ALA
50
n
53
ALA
50
A
VAL
51
n
54
VAL
51
A
THR
52
n
55
THR
52
A
HIS
53
n
56
HIS
53
A
ILE
54
n
57
ILE
54
A
LYS
55
n
58
LYS
55
A
ILE
56
n
59
ILE
56
A
GLN
57
n
60
GLN
57
A
ASN
58
n
61
ASN
58
A
THR
59
n
62
THR
59
A
GLY
60
n
63
GLY
60
A
ASP
61
n
64
ASP
61
A
TYR
62
n
65
TYR
62
A
TYR
63
n
66
TYR
63
A
ASP
64
n
67
ASP
64
A
LEU
65
n
68
LEU
65
A
TYR
66
n
69
TYR
66
A
GLY
67
n
70
GLY
67
A
GLY
68
n
71
GLY
68
A
GLU
69
n
72
GLU
69
A
LYS
70
n
73
LYS
70
A
PHE
71
n
74
PHE
71
A
ALA
72
n
75
ALA
72
A
THR
73
n
76
THR
73
A
LEU
74
n
77
LEU
74
A
ALA
75
n
78
ALA
75
A
LYS
76
n
79
LYS
76
A
LEU
77
n
80
LEU
77
A
VAL
78
n
81
VAL
78
A
GLN
79
n
82
GLN
79
A
TYR
80
n
83
TYR
80
A
TYR
81
n
84
TYR
81
A
MET
82
n
85
MET
82
A
GLU
83
n
86
GLU
83
A
HIS
84
n
87
HIS
84
A
HIS
85
n
88
HIS
85
A
GLY
86
n
89
GLY
86
A
GLN
87
n
90
GLN
87
A
LEU
88
n
91
LEU
88
A
LYS
89
n
92
LYS
89
A
GLU
90
n
93
GLU
90
A
LYS
91
n
94
LYS
91
A
ASN
92
n
95
ASN
92
A
GLY
93
n
96
GLY
93
A
ASP
94
n
97
ASP
94
A
VAL
95
n
98
VAL
95
A
ILE
96
n
99
ILE
96
A
GLU
97
n
100
GLU
97
A
LEU
98
n
101
LEU
98
A
LYS
99
n
102
LYS
99
A
TYR
100
n
103
TYR
100
A
PRO
101
n
104
PRO
101
A
LEU
102
n
105
LEU
102
A
ASN
103
n
106
ASN
103
A
CYS
104
n
107
CYS
104
A
ALA
105
n
108
ALA
105
A
ASP
106
n
109
ASP
106
A
PRO
107
n
110
PRO
107
A
THR
108
n
111
THR
108
A
SER
109
n
112
SER
109
A
GLU
110
n
113
GLU
110
A
ARG
111
n
114
ARG
111
A
TRP
112
n
115
TRP
112
A
PHE
113
n
116
PHE
113
A
HIS
114
n
117
HIS
114
A
GLY
115
n
118
GLY
115
A
HIS
116
n
119
HIS
116
A
LEU
117
n
120
LEU
117
A
SER
118
n
121
SER
118
A
GLY
119
n
122
GLY
119
A
LYS
120
n
123
LYS
120
A
GLU
121
n
124
GLU
121
A
ALA
122
n
125
ALA
122
A
GLU
123
n
126
GLU
123
A
LYS
124
n
127
LYS
124
A
LEU
125
n
128
LEU
125
A
LEU
126
n
129
LEU
126
A
THR
127
n
130
THR
127
A
GLU
128
n
131
GLU
128
A
LYS
129
n
132
LYS
129
A
GLY
130
n
133
GLY
130
A
LYS
131
n
134
LYS
131
A
HIS
132
n
135
HIS
132
A
GLY
133
n
136
GLY
133
A
SER
134
n
137
SER
134
A
PHE
135
n
138
PHE
135
A
LEU
136
n
139
LEU
136
A
VAL
137
n
140
VAL
137
A
ARG
138
n
141
ARG
138
A
GLU
139
n
142
GLU
139
A
SER
140
n
143
SER
140
A
GLN
141
n
144
GLN
141
A
SER
142
n
145
SER
142
A
HIS
143
n
146
HIS
143
A
PRO
144
n
147
PRO
144
A
GLY
145
n
148
GLY
145
A
ASP
146
n
149
ASP
146
A
PHE
147
n
150
PHE
147
A
VAL
148
n
151
VAL
148
A
LEU
149
n
152
LEU
149
A
SER
150
n
153
SER
150
A
VAL
151
n
154
VAL
151
A
ARG
152
n
155
ARG
152
A
THR
153
n
156
THR
153
A
GLY
154
n
157
GLY
154
A
ASP
155
n
158
ASP
155
A
ASP
156
n
159
ASP
156
A
LYS
157
n
160
LYS
157
A
GLY
158
n
161
GLY
158
A
GLU
159
n
162
GLU
159
A
SER
160
n
163
SER
160
A
ASN
161
n
164
ASN
161
A
ASP
162
n
165
ASP
162
A
GLY
163
n
166
GLY
163
A
LYS
164
n
167
LYS
164
A
SER
165
n
168
SER
165
A
LYS
166
n
169
LYS
166
A
VAL
167
n
170
VAL
167
A
THR
168
n
171
THR
168
A
HIS
169
n
172
HIS
169
A
VAL
170
n
173
VAL
170
A
MET
171
n
174
MET
171
A
ILE
172
n
175
ILE
172
A
ARG
173
n
176
ARG
173
A
CYS
174
n
177
CYS
174
A
GLN
175
n
178
GLN
175
A
GLU
176
n
179
GLU
176
A
LEU
177
n
180
LEU
177
A
LYS
178
n
181
LYS
178
A
TYR
179
n
182
TYR
179
A
ASP
180
n
183
ASP
180
A
VAL
181
n
184
VAL
181
A
GLY
182
n
185
GLY
182
A
GLY
183
n
186
GLY
183
A
GLY
184
n
187
GLY
184
A
GLU
185
n
188
GLU
185
A
ARG
186
n
189
ARG
186
A
PHE
187
n
190
PHE
187
A
ASP
188
n
191
ASP
188
A
SER
189
n
192
SER
189
A
LEU
190
n
193
LEU
190
A
THR
191
n
194
THR
191
A
ASP
192
n
195
ASP
192
A
LEU
193
n
196
LEU
193
A
VAL
194
n
197
VAL
194
A
GLU
195
n
198
GLU
195
A
HIS
196
n
199
HIS
196
A
TYR
197
n
200
TYR
197
A
LYS
198
n
201
LYS
198
A
LYS
199
n
202
LYS
199
A
ASN
200
n
203
ASN
200
A
PRO
201
n
204
PRO
201
A
MET
202
n
205
MET
202
A
VAL
203
n
206
VAL
203
A
GLU
204
n
207
GLU
204
A
THR
205
n
208
THR
205
A
LEU
206
n
209
LEU
206
A
GLY
207
n
210
GLY
207
A
THR
208
n
211
THR
208
A
VAL
209
n
212
VAL
209
A
LEU
210
n
213
LEU
210
A
GLN
211
n
214
GLN
211
A
LEU
212
n
215
LEU
212
A
LYS
213
n
216
LYS
213
A
GLN
214
n
217
GLN
214
A
PRO
215
n
218
PRO
215
A
LEU
216
n
219
LEU
216
A
ASN
217
n
220
ASN
217
A
THR
218
n
221
THR
218
A
THR
219
n
222
THR
219
A
ARG
220
n
223
ARG
220
A
ILE
221
n
224
ILE
221
A
ASN
222
n
225
ASN
222
A
ALA
223
n
226
ALA
223
A
ALA
224
n
227
ALA
224
A
GLU
225
n
228
GLU
225
A
ILE
226
n
229
ILE
226
A
GLU
227
n
230
GLU
227
A
SER
228
n
231
SER
228
A
ARG
229
n
232
ARG
229
A
VAL
230
n
233
VAL
230
A
ARG
231
n
234
ARG
231
A
GLU
232
n
235
GLU
232
A
LEU
233
n
236
LEU
233
A
SER
234
n
237
SER
234
A
LYS
235
n
238
LYS
235
A
n
239
236
A
n
240
237
A
n
241
238
A
n
242
239
A
n
243
240
A
n
244
241
A
n
245
242
A
n
246
243
A
LYS
244
n
247
LYS
244
A
GLN
245
n
248
GLN
245
A
GLY
246
n
249
GLY
246
A
PHE
247
n
250
PHE
247
A
TRP
248
n
251
TRP
248
A
GLU
249
n
252
GLU
249
A
GLU
250
n
253
GLU
250
A
PHE
251
n
254
PHE
251
A
GLU
252
n
255
GLU
252
A
THR
253
n
256
THR
253
A
LEU
254
n
257
LEU
254
A
GLN
255
n
258
GLN
255
A
GLN
256
n
259
GLN
256
A
GLN
257
n
260
GLN
257
A
GLU
258
n
261
GLU
258
A
CYS
259
n
262
CYS
259
A
LYS
260
n
263
LYS
260
A
LEU
261
n
264
LEU
261
A
LEU
262
n
265
LEU
262
A
TYR
263
n
266
TYR
263
A
SER
264
n
267
SER
264
A
ARG
265
n
268
ARG
265
A
LYS
266
n
269
LYS
266
A
GLU
267
n
270
GLU
267
A
GLY
268
n
271
GLY
268
A
GLN
269
n
272
GLN
269
A
ARG
270
n
273
ARG
270
A
GLN
271
n
274
GLN
271
A
GLU
272
n
275
GLU
272
A
ASN
273
n
276
ASN
273
A
LYS
274
n
277
LYS
274
A
ASN
275
n
278
ASN
275
A
LYS
276
n
279
LYS
276
A
ASN
277
n
280
ASN
277
A
ARG
278
n
281
ARG
278
A
TYR
279
n
282
TYR
279
A
LYS
280
n
283
LYS
280
A
ASN
281
n
284
ASN
281
A
ILE
282
n
285
ILE
282
A
LEU
283
n
286
LEU
283
A
PRO
284
n
287
PRO
284
A
PHE
285
n
288
PHE
285
A
ASP
286
n
289
ASP
286
A
HIS
287
n
290
HIS
287
A
THR
288
n
291
THR
288
A
ARG
289
n
292
ARG
289
A
VAL
290
n
293
VAL
290
A
VAL
291
n
294
VAL
291
A
LEU
292
n
295
LEU
292
A
HIS
293
n
296
HIS
293
A
n
297
294
A
n
298
295
A
n
299
296
A
n
300
297
A
n
301
298
A
n
302
299
A
n
303
300
A
n
304
301
A
SER
302
n
305
SER
302
A
ASP
303
n
306
ASP
303
A
TYR
304
n
307
TYR
304
A
ILE
305
n
308
ILE
305
A
ASN
306
n
309
ASN
306
A
ALA
307
n
310
ALA
307
A
ASN
308
n
311
ASN
308
A
ILE
309
n
312
ILE
309
A
ILE
310
n
313
ILE
310
A
MET
311
n
314
MET
311
A
PRO
312
n
315
PRO
312
A
GLU
313
n
316
GLU
313
A
n
317
314
A
n
318
315
A
n
319
316
A
n
320
317
A
n
321
318
A
n
322
319
A
n
323
320
A
n
324
321
A
n
325
322
A
n
326
323
A
LYS
324
n
327
LYS
324
A
LYS
325
n
328
LYS
325
A
SER
326
n
329
SER
326
A
TYR
327
n
330
TYR
327
A
ILE
328
n
331
ILE
328
A
ALA
329
n
332
ALA
329
A
THR
330
n
333
THR
330
A
GLN
331
n
334
GLN
331
A
GLY
332
n
335
GLY
332
A
CYS
333
n
336
CYS
333
A
LEU
334
n
337
LEU
334
A
GLN
335
n
338
GLN
335
A
ASN
336
n
339
ASN
336
A
THR
337
n
340
THR
337
A
VAL
338
n
341
VAL
338
A
ASN
339
n
342
ASN
339
A
ASP
340
n
343
ASP
340
A
PHE
341
n
344
PHE
341
A
TRP
342
n
345
TRP
342
A
ARG
343
n
346
ARG
343
A
MET
344
n
347
MET
344
A
VAL
345
n
348
VAL
345
A
PHE
346
n
349
PHE
346
A
GLN
347
n
350
GLN
347
A
GLU
348
n
351
GLU
348
A
ASN
349
n
352
ASN
349
A
SER
350
n
353
SER
350
A
ARG
351
n
354
ARG
351
A
VAL
352
n
355
VAL
352
A
ILE
353
n
356
ILE
353
A
VAL
354
n
357
VAL
354
A
MET
355
n
358
MET
355
A
THR
356
n
359
THR
356
A
THR
357
n
360
THR
357
A
LYS
358
n
361
LYS
358
A
GLU
359
n
362
GLU
359
A
VAL
360
n
363
VAL
360
A
GLU
361
n
364
GLU
361
A
ARG
362
n
365
ARG
362
A
GLY
363
n
366
GLY
363
A
LYS
364
n
367
LYS
364
A
SER
365
n
368
SER
365
A
LYS
366
n
369
LYS
366
A
CYS
367
n
370
CYS
367
A
VAL
368
n
371
VAL
368
A
LYS
369
n
372
LYS
369
A
TYR
370
n
373
TYR
370
A
TRP
371
n
374
TRP
371
A
PRO
372
n
375
PRO
372
A
ASP
373
n
376
ASP
373
A
GLU
374
n
377
GLU
374
A
TYR
375
n
378
TYR
375
A
ALA
376
n
379
ALA
376
A
LEU
377
n
380
LEU
377
A
LYS
378
n
381
LYS
378
A
GLU
379
n
382
GLU
379
A
TYR
380
n
383
TYR
380
A
GLY
381
n
384
GLY
381
A
VAL
382
n
385
VAL
382
A
MET
383
n
386
MET
383
A
ARG
384
n
387
ARG
384
A
VAL
385
n
388
VAL
385
A
ARG
386
n
389
ARG
386
A
ASN
387
n
390
ASN
387
A
VAL
388
n
391
VAL
388
A
LYS
389
n
392
LYS
389
A
GLU
390
n
393
GLU
390
A
SER
391
n
394
SER
391
A
ALA
392
n
395
ALA
392
A
ALA
393
n
396
ALA
393
A
HIS
394
n
397
HIS
394
A
ASP
395
n
398
ASP
395
A
TYR
396
n
399
TYR
396
A
THR
397
n
400
THR
397
A
LEU
398
n
401
LEU
398
A
ARG
399
n
402
ARG
399
A
GLU
400
n
403
GLU
400
A
LEU
401
n
404
LEU
401
A
LYS
402
n
405
LYS
402
A
LEU
403
n
406
LEU
403
A
SER
404
n
407
SER
404
A
LYS
405
n
408
LYS
405
A
VAL
406
n
409
VAL
406
A
GLY
407
n
410
GLY
407
A
GLN
408
n
411
GLN
408
A
GLY
409
n
412
GLY
409
A
ASN
410
n
413
ASN
410
A
THR
411
n
414
THR
411
A
GLU
412
n
415
GLU
412
A
ARG
413
n
416
ARG
413
A
THR
414
n
417
THR
414
A
VAL
415
n
418
VAL
415
A
TRP
416
n
419
TRP
416
A
GLN
417
n
420
GLN
417
A
TYR
418
n
421
TYR
418
A
HIS
419
n
422
HIS
419
A
PHE
420
n
423
PHE
420
A
ARG
421
n
424
ARG
421
A
THR
422
n
425
THR
422
A
TRP
423
n
426
TRP
423
A
PRO
424
n
427
PRO
424
A
ASP
425
n
428
ASP
425
A
HIS
426
n
429
HIS
426
A
GLY
427
n
430
GLY
427
A
VAL
428
n
431
VAL
428
A
PRO
429
n
432
PRO
429
A
SER
430
n
433
SER
430
A
ASP
431
n
434
ASP
431
A
PRO
432
n
435
PRO
432
A
GLY
433
n
436
GLY
433
A
GLY
434
n
437
GLY
434
A
VAL
435
n
438
VAL
435
A
LEU
436
n
439
LEU
436
A
ASP
437
n
440
ASP
437
A
PHE
438
n
441
PHE
438
A
LEU
439
n
442
LEU
439
A
GLU
440
n
443
GLU
440
A
GLU
441
n
444
GLU
441
A
VAL
442
n
445
VAL
442
A
HIS
443
n
446
HIS
443
A
HIS
444
n
447
HIS
444
A
LYS
445
n
448
LYS
445
A
GLN
446
n
449
GLN
446
A
GLU
447
n
450
GLU
447
A
SER
448
n
451
SER
448
A
ILE
449
n
452
ILE
449
A
MET
450
n
453
MET
450
A
ASP
451
n
454
ASP
451
A
ALA
452
n
455
ALA
452
A
GLY
453
n
456
GLY
453
A
PRO
454
n
457
PRO
454
A
VAL
455
n
458
VAL
455
A
VAL
456
n
459
VAL
456
A
VAL
457
n
460
VAL
457
A
HIS
458
n
461
HIS
458
A
CYS
459
n
462
CYS
459
A
SER
460
n
463
SER
460
A
ALA
461
n
464
ALA
461
A
GLY
462
n
465
GLY
462
A
ILE
463
n
466
ILE
463
A
GLY
464
n
467
GLY
464
A
ARG
465
n
468
ARG
465
A
THR
466
n
469
THR
466
A
GLY
467
n
470
GLY
467
A
THR
468
n
471
THR
468
A
PHE
469
n
472
PHE
469
A
ILE
470
n
473
ILE
470
A
VAL
471
n
474
VAL
471
A
ILE
472
n
475
ILE
472
A
ASP
473
n
476
ASP
473
A
ILE
474
n
477
ILE
474
A
LEU
475
n
478
LEU
475
A
ILE
476
n
479
ILE
476
A
ASP
477
n
480
ASP
477
A
ILE
478
n
481
ILE
478
A
ILE
479
n
482
ILE
479
A
ARG
480
n
483
ARG
480
A
GLU
481
n
484
GLU
481
A
LYS
482
n
485
LYS
482
A
GLY
483
n
486
GLY
483
A
VAL
484
n
487
VAL
484
A
ASP
485
n
488
ASP
485
A
CYS
486
n
489
CYS
486
A
ASP
487
n
490
ASP
487
A
ILE
488
n
491
ILE
488
A
ASP
489
n
492
ASP
489
A
VAL
490
n
493
VAL
490
A
PRO
491
n
494
PRO
491
A
LYS
492
n
495
LYS
492
A
THR
493
n
496
THR
493
A
ILE
494
n
497
ILE
494
A
GLN
495
n
498
GLN
495
A
MET
496
n
499
MET
496
A
VAL
497
n
500
VAL
497
A
ARG
498
n
501
ARG
498
A
SER
499
n
502
SER
499
A
GLN
500
n
503
GLN
500
A
ARG
501
n
504
ARG
501
A
SER
502
n
505
SER
502
A
GLY
503
n
506
GLY
503
A
MET
504
n
507
MET
504
A
VAL
505
n
508
VAL
505
A
GLN
506
n
509
GLN
506
A
THR
507
n
510
THR
507
A
GLU
508
n
511
GLU
508
A
ALA
509
n
512
ALA
509
A
GLN
510
n
513
GLN
510
A
TYR
511
n
514
TYR
511
A
ARG
512
n
515
ARG
512
A
PHE
513
n
516
PHE
513
A
ILE
514
n
517
ILE
514
A
TYR
515
n
518
TYR
515
A
MET
516
n
519
MET
516
A
ALA
517
n
520
ALA
517
A
VAL
518
n
521
VAL
518
A
GLN
519
n
522
GLN
519
A
HIS
520
n
523
HIS
520
A
TYR
521
n
524
TYR
521
A
ILE
522
n
525
ILE
522
A
GLU
523
n
526
GLU
523
A
THR
524
n
527
THR
524
A
LEU
525
n
528
LEU
525
A
GLN
526
n
529
GLN
526
A
ARG
527
n
530
ARG
527
A
n
531
528
A
n
532
529
A
2.63990382358
0.344724783173
0.13214453394
1.53487765324
-0.179412619119
2.17298261374
0.223109955667
0.331280778842
-0.0474434652832
0.0467500100855
-0.137968604258
-0.0328078804777
0.0462744809681
-0.356745297889
-0.12206531938
0.234185811088
-0.0585802302843
-0.0126192169219
0.410827415894
0.00585186249597
0.319428090388
refined
27.8185558832
-6.99806785274
239.736689331
X-RAY DIFFRACTION
2.13770618522
0.921021271194
-0.0341277597864
2.96362546952
-0.0021315235207
2.6542091069
0.0600659489776
0.0681006987813
0.323645853752
-0.1078629961
-0.159718864531
0.219489745443
-0.364621757356
-0.0700697710988
0.0788614209117
0.412220318232
0.1334004538
-0.013898343864
0.332235657458
0.0260211829739
0.209408188865
refined
37.1679053925
12.4563813132
230.247776678
X-RAY DIFFRACTION
1.2471958676
0.458732239406
0.0646581852021
1.96724936274
0.231577689972
3.48353196898
-0.033161080598
0.17337621058
0.212517511481
0.060142930477
0.104813621876
-0.11831737376
-0.106804347448
-0.165890079721
0.0822300470424
0.448832830358
0.0702128856538
-0.0253331384594
0.29769579773
0.103172268191
0.412449048126
refined
38.6517824484
14.659137294
229.931209553
X-RAY DIFFRACTION
4.02375069799
-0.883337956471
1.47159736765
2.80687093691
-0.617431606815
2.61942194088
0.26606440032
0.270020920879
-0.436712187011
0.00503843331807
-0.121720641722
0.126038737565
0.258772629807
0.0457878497594
-0.184262166336
0.24077454398
-0.0330208521648
-0.0342672496837
0.280953421598
0.0321678812354
0.232273058354
refined
50.0104083619
-7.51520715245
250.068603138
X-RAY DIFFRACTION
2.86232734616
-1.28870682687
0.74639768417
2.39468060174
-0.695703445246
2.58999741754
-0.0703118702722
-0.484480674542
0.13163379783
0.370105787768
0.192724328582
-0.0958362799199
-0.179322186788
-0.0758858840999
-0.0597882889202
0.355942866339
-0.0396823124055
-0.00420658387953
0.271299264145
0.0154521966882
0.201647294517
refined
49.3407289669
1.65317062303
263.415246278
X-RAY DIFFRACTION
X-RAY DIFFRACTION
1
chain 'A' and (resid 2 through 82 )
X-RAY DIFFRACTION
2
chain 'A' and (resid 83 through 175 )
X-RAY DIFFRACTION
3
chain 'A' and (resid 176 through 245 )
X-RAY DIFFRACTION
4
chain 'A' and (resid 246 through 347 )
X-RAY DIFFRACTION
5
chain 'A' and (resid 348 through 527 )
author_and_software_defined_assembly
PISA
1
monomeric
gel filtration
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
71
A
O
PHE
74
A
N
TYR
63
A
N
TYR
66
A
O
ASP
64
A
O
ASP
67
A
N
GLN
57
A
N
GLN
60
A
O
ILE
54
A
O
ILE
57
A
N
LEU
43
A
N
LEU
46
A
O
ARG
46
A
O
ARG
49
A
N
SER
28
A
N
SER
31
A
N
PHE
29
A
N
PHE
32
A
O
TYR
100
A
O
TYR
103
A
N
LEU
88
A
N
LEU
91
A
O
ILE
96
A
O
ILE
99
A
N
HIS
114
A
N
HIS
117
A
O
VAL
137
A
O
VAL
140
A
N
SER
134
A
N
SER
137
A
O
ARG
152
A
O
ARG
155
A
N
VAL
151
A
N
VAL
154
A
O
THR
168
A
O
THR
171
A
N
GLN
175
A
N
GLN
178
A
O
LYS
178
A
O
LYS
181
A
N
HIS
114
A
N
HIS
117
A
O
VAL
137
A
O
VAL
140
A
N
PHE
135
A
N
PHE
138
A
O
GLN
214
A
O
GLN
217
A
N
MET
202
A
N
MET
205
A
O
LEU
210
A
O
LEU
213
A
N
ILE
221
A
N
ILE
224
A
O
ILE
488
A
O
ILE
491
A
N
VAL
290
A
N
VAL
293
A
O
ALA
307
A
O
ALA
310
A
N
ILE
310
A
N
ILE
313
A
O
TYR
327
A
O
TYR
330
A
N
ILE
328
A
N
ILE
331
A
O
VAL
457
A
O
VAL
460
A
O
HIS
458
A
O
HIS
461
A
N
VAL
354
A
N
VAL
357
A
N
ILE
353
A
N
ILE
356
A
O
TYR
418
A
O
TYR
421
A
O
HIS
419
A
O
HIS
422
A
N
THR
397
A
N
THR
400
A
O
LEU
398
A
O
LEU
401
A
N
SER
391
A
N
SER
394
A
O
VAL
385
A
O
VAL
388
A
N
LYS
378
A
N
LYS
381
A
N
GLU
361
A
N
GLU
364
A
O
LYS
364
A
O
LYS
367
1
A
CG
HIS
84
A
CG
HIS
87
1
Y
1
A
ND1
HIS
84
A
ND1
HIS
87
1
Y
1
A
CD2
HIS
84
A
CD2
HIS
87
1
Y
1
A
CE1
HIS
84
A
CE1
HIS
87
1
Y
1
A
NE2
HIS
84
A
NE2
HIS
87
1
Y
1
A
CG
LYS
91
A
CG
LYS
94
1
Y
1
A
CD
LYS
91
A
CD
LYS
94
1
Y
1
A
CE
LYS
91
A
CE
LYS
94
1
Y
1
A
NZ
LYS
91
A
NZ
LYS
94
1
Y
1
A
CG
GLU
159
A
CG
GLU
162
1
Y
1
A
CD
GLU
159
A
CD
GLU
162
1
Y
1
A
OE1
GLU
159
A
OE1
GLU
162
1
Y
1
A
OE2
GLU
159
A
OE2
GLU
162
1
Y
1
A
CG
ASN
161
A
CG
ASN
164
1
Y
1
A
OD1
ASN
161
A
OD1
ASN
164
1
Y
1
A
ND2
ASN
161
A
ND2
ASN
164
1
Y
1
A
CG
LYS
164
A
CG
LYS
167
1
Y
1
A
CD
LYS
164
A
CD
LYS
167
1
Y
1
A
CE
LYS
164
A
CE
LYS
167
1
Y
1
A
NZ
LYS
164
A
NZ
LYS
167
1
Y
1
A
CG
LYS
235
A
CG
LYS
238
1
Y
1
A
CD
LYS
235
A
CD
LYS
238
1
Y
1
A
CE
LYS
235
A
CE
LYS
238
1
Y
1
A
NZ
LYS
235
A
NZ
LYS
238
1
Y
1
A
CG
LYS
244
A
CG
LYS
247
1
Y
1
A
CD
LYS
244
A
CD
LYS
247
1
Y
1
A
CE
LYS
244
A
CE
LYS
247
1
Y
1
A
NZ
LYS
244
A
NZ
LYS
247
1
Y
1
A
CG
ARG
527
A
CG
ARG
530
1
Y
1
A
CD
ARG
527
A
CD
ARG
530
1
Y
1
A
NE
ARG
527
A
NE
ARG
530
1
Y
1
A
CZ
ARG
527
A
CZ
ARG
530
1
Y
1
A
NH1
ARG
527
A
NH1
ARG
530
1
Y
1
A
NH2
ARG
527
A
NH2
ARG
530
1
Y
1
A
GLY
-2
A
GLY
1
1
Y
1
A
SER
-1
A
SER
2
1
Y
1
A
GLY
0
A
GLY
3
1
Y
1
A
MET
1
A
MET
4
1
Y
1
A
LYS
35
A
LYS
38
1
Y
1
A
SER
36
A
SER
39
1
Y
1
A
ASN
37
A
ASN
40
1
Y
1
A
LEU
236
A
LEU
239
1
Y
1
A
ALA
237
A
ALA
240
1
Y
1
A
GLU
238
A
GLU
241
1
Y
1
A
THR
239
A
THR
242
1
Y
1
A
THR
240
A
THR
243
1
Y
1
A
ASP
241
A
ASP
244
1
Y
1
A
LYS
242
A
LYS
245
1
Y
1
A
VAL
243
A
VAL
246
1
Y
1
A
ASP
294
A
ASP
297
1
Y
1
A
GLY
295
A
GLY
298
1
Y
1
A
ASP
296
A
ASP
299
1
Y
1
A
PRO
297
A
PRO
300
1
Y
1
A
ASN
298
A
ASN
301
1
Y
1
A
GLU
299
A
GLU
302
1
Y
1
A
PRO
300
A
PRO
303
1
Y
1
A
VAL
301
A
VAL
304
1
Y
1
A
PHE
314
A
PHE
317
1
Y
1
A
GLU
315
A
GLU
318
1
Y
1
A
THR
316
A
THR
319
1
Y
1
A
LYS
317
A
LYS
320
1
Y
1
A
CYS
318
A
CYS
321
1
Y
1
A
ASN
319
A
ASN
322
1
Y
1
A
ASN
320
A
ASN
323
1
Y
1
A
SER
321
A
SER
324
1
Y
1
A
LYS
322
A
LYS
325
1
Y
1
A
PRO
323
A
PRO
326
1
Y
1
A
ARG
528
A
ARG
531
1
Y
1
A
ILE
529
A
ILE
532
1
Y
1
10.45
1.70
111.00
121.45
A
A
A
CB
CG
CD1
LEU
LEU
LEU
19
19
19
N
1
A
LYS
99
-136.13
-51.55
1
A
HIS
116
-68.50
87.37
1
A
LYS
131
-127.59
-166.86
1
A
GLN
245
-176.54
148.50
1
A
ARG
265
-140.41
41.47
1
A
TYR
375
74.99
-8.87
1
A
ASP
451
38.96
53.33
1
A
CYS
459
-136.43
-109.89
1
A
SER
460
-102.88
-74.55
1
A
ILE
463
-133.17
-43.82
1
A
VAL
505
65.86
110.78
56.20
0.2651
0.2046
0.2107
2.68
54.71
1420
14212
9.99
99.23
0.30
1,2
FREE R-VALUE
1.33
MOLECULAR REPLACEMENT
26.28
0.9
1.11
4DGP
2.68
54.71
67
4079
23
0
3989
0.00204849580637
4146
0.511424802676
5603
0.082522582629
601
0.00224959665637
728
17.1003335969
2482
0.3108
0.2576
2.77
127
1150
92.5362318841
0.3189
0.2541
2.89
141
1275
99.9294283698
0.3021
0.2442
3.02
138
1247
99.9278499278
0.3272
0.2337
3.18
143
1285
100.0
0.3035
0.2282
3.38
141
1273
100.0
0.2623
0.20
3.64
140
1260
99.9286224126
0.2523
0.1896
4.01
143
1280
99.9297752809
0.2353
0.1648
4.59
144
1299
99.8615916955
0.2051
0.1739
5.77
146
1316
100.0
0.2736
0.2178
54.72
157
1407
99.9361022364
42.9596256648
2.68
72.95
6CMS
14269
0.981
1
6.2
13.4
99.3
2.68
2.83
2.6
1936
0.874
1
13.8
94.9
data collection
Blu-Ice
data reduction
MOSFLM
data scaling
Aimless
phasing
PHASER
model building
Coot
refinement
PHENIX
1.12_2829
18
orthorhombic
P 2 21 21
P 2 2ab (z,x,y)
x,y,z
x,-y,-z
-x,y+1/2,-z+1/2
-x,-y+1/2,z+1/2
N
Closed structure of active SHP2 mutant E76K bound to SHP099 inhibitor
1
N
N
2
N
N
3
N
N
A
THR
12
A
THR
15
HELX_P
A
ARG
23
A
ARG
26
1
AA1
12
A
THR
73
A
THR
76
HELX_P
A
GLU
83
A
GLU
86
1
AA2
11
A
SER
118
A
SER
121
HELX_P
A
LYS
129
A
LYS
132
1
AA3
12
A
SER
189
A
SER
192
HELX_P
A
ASN
200
A
ASN
203
1
AA4
12
A
GLU
225
A
GLU
228
HELX_P
A
LYS
235
A
LYS
238
1
AA5
11
A
GLN
245
A
GLN
248
HELX_P
A
GLN
257
A
GLN
260
1
AA6
13
A
GLU
258
A
GLU
261
HELX_P
A
LEU
261
A
LEU
264
5
AA7
4
A
ARG
265
A
ARG
268
HELX_P
A
ARG
270
A
ARG
273
1
AA8
6
A
ASN
273
A
ASN
276
HELX_P
A
ASN
277
A
ASN
280
5
AA9
5
A
PHE
285
A
PHE
288
HELX_P
A
HIS
287
A
HIS
290
5
AB1
3
A
THR
337
A
THR
340
HELX_P
A
GLU
348
A
GLU
351
1
AB2
12
A
PRO
432
A
PRO
435
HELX_P
A
ILE
449
A
ILE
452
1
AB3
18
A
ILE
463
A
ILE
466
HELX_P
A
GLY
483
A
GLY
486
1
AB4
21
A
ASP
489
A
ASP
492
HELX_P
A
SER
499
A
SER
502
1
AB5
11
A
THR
507
A
THR
510
HELX_P
A
ARG
527
A
ARG
530
1
AB6
21
HYDROLASE/HYDROLASE Inhibitor
protein tyrosine phosphatase, src homology domain 2, inactive state, active mutant, HYDROLASE, HYDROLASE-HYDROLASE Inhibitor complex
PTN11_HUMAN
UNP
1
1
Q06124
Q06124-2
MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQY
YMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGES
NDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETT
DKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNN
SKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRE
LKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIR
EKGVDCDIDVPKTIQMVRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRI
1
529
6CMS
1
529
Q06124
A
1
4
532
1
expression tag
GLY
-2
6CMS
A
Q06124
UNP
1
1
expression tag
SER
-1
6CMS
A
Q06124
UNP
2
1
expression tag
GLY
0
6CMS
A
Q06124
UNP
3
1
GLU
engineered mutation
LYS
76
6CMS
A
Q06124
UNP
76
79
6
2
5
3
2
2
9
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
70
A
LYS
73
A
PHE
71
A
PHE
74
A
TYR
63
A
TYR
66
A
LEU
65
A
LEU
68
A
ALA
50
A
ALA
53
A
GLN
57
A
GLN
60
A
PHE
41
A
PHE
44
A
ARG
47
A
ARG
50
A
SER
28
A
SER
31
A
PRO
33
A
PRO
36
A
TYR
100
A
TYR
103
A
PRO
101
A
PRO
104
A
LEU
88
A
LEU
91
A
LYS
89
A
LYS
92
A
VAL
95
A
VAL
98
A
ILE
96
A
ILE
99
A
PHE
113
A
PHE
116
A
HIS
114
A
HIS
117
A
SER
134
A
SER
137
A
GLU
139
A
GLU
142
A
PHE
147
A
PHE
150
A
THR
153
A
THR
156
A
LYS
166
A
LYS
169
A
GLN
175
A
GLN
178
A
LYS
178
A
LYS
181
A
ASP
180
A
ASP
183
A
PHE
113
A
PHE
116
A
HIS
114
A
HIS
117
A
SER
134
A
SER
137
A
GLU
139
A
GLU
142
A
GLN
214
A
GLN
217
A
PRO
215
A
PRO
218
A
MET
202
A
MET
205
A
VAL
203
A
VAL
206
A
VAL
209
A
VAL
212
A
LEU
210
A
LEU
213
A
ILE
221
A
ILE
224
A
ASN
222
A
ASN
225
A
ASP
487
A
ASP
490
A
ILE
488
A
ILE
491
A
ARG
289
A
ARG
292
A
VAL
291
A
VAL
294
A
TYR
304
A
TYR
307
A
ILE
310
A
ILE
313
A
TYR
327
A
TYR
330
A
THR
330
A
THR
333
A
VAL
455
A
VAL
458
A
HIS
458
A
HIS
461
A
VAL
352
A
VAL
355
A
MET
355
A
MET
358
A
GLN
408
A
GLN
411
A
PHE
420
A
PHE
423
A
TYR
396
A
TYR
399
A
LYS
405
A
LYS
408
A
MET
383
A
MET
386
A
ALA
392
A
ALA
395
A
LEU
377
A
LEU
380
A
TYR
380
A
TYR
383
A
VAL
360
A
VAL
363
A
GLU
361
A
GLU
364
A
LYS
364
A
LYS
367
A
SER
365
A
SER
368
binding site for residue 5OD A 601
A
5OD
601
Software
14
A
THR
108
A
THR
111
14
1_555
A
GLU
110
A
GLU
113
14
1_555
A
ARG
111
A
ARG
114
14
1_555
A
PHE
113
A
PHE
116
14
1_555
A
THR
219
A
THR
222
14
1_555
A
GLU
249
A
GLU
252
14
1_555
A
GLU
250
A
GLU
253
14
1_555
A
THR
253
A
THR
256
14
1_555
A
LEU
254
A
LEU
257
14
1_555
A
PRO
491
A
PRO
494
14
1_555
A
LYS
492
A
LYS
495
14
1_555
A
GLN
495
A
GLN
498
14
1_555
A
HOH
710
C
HOH
14
1_555
A
HOH
732
C
HOH
14
1_555
18
P 2 21 21
P 2 2ab (z,x,y)